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Salt Stress 24 h (shoot)
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots		 Stress mock 24 h (shoot) Stress treatments 1.00  
1.00  
2 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.88  
0.87  
3 ABA 3 h Col-0 10 µM ABA / seedling Mock 3 h Basic hormone treatment of seedlings 0.79  
0.76  
4 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.70  
0.44  
5 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.66  
0.42  
6 Cold Stress 24 h (shoot) Col-0 cold stress (4˚) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.66  
0.71  
7 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.66  
0.65  
8 Selenate (shoot) WS Selenate 40 µM /
shoot		 Ws (shoot) GEO bulk 0.62  
0.57  
9 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots		 Stress mock 24 h (root) Stress treatments 0.61  
0.64  
10 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.58  
0.36  
11 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 0.57  
0.41  
12 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.56  
0.41  
13 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 0.55  
0.70  
14 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.55  
0.57  
15 E.orontii Infection 6 h Col-0 E.orontii Infection 6 h
/ leaves		 Uninfection 6 h Elicitor treatments -0.54  
-0.34  
16 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.51  
0.46  
17 Seeds stage8 w/o siliques Col-0 no treatment / seeds
stage 8, w/o siliques
(long days)		 Control for tissue data Developmental series; organs / tissues at different ages 0.50  
0.33  
18 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.40  
0.52  
19 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.40  
0.54  
20 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.40  
0.62  
21 Drought Stress 24 h (shoot) Col-0 drought (15 min. dry air
then further incubation
in closed vessel) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.35  
0.51  
22 FarRed Light 45min Col-0 continuous far red light
/ seedlings		 White Light 45min Light treatments -0.30  
-0.67  
23 GA3 3 h (ga1) ga1-5 1 µM GA3 / seedling Mock 3 h (ga1) Basic hormone treatment of seedlings -0.12  
-0.52  
24 t-zeatin 0.5 h Col-0 1 µM t-zeatin /
seedling		 Mock 0.5 h Basic hormone treatment of seedlings 0.05  
-0.61