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Methyl Jasmonate 1 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling
Mock 1 h Basic hormone treatment of seedlings 1.00  
1.00  
2 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.91  
0.89  
3 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling
Mock 3 h Basic hormone treatment of seedlings 0.87  
0.81  
4 OPDA 4 h Col 75 µM OPDA /
seedling
Col-0 GEO bulk 0.81  
0.68  
5 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf
Mock 18 h Botrytis cinerea infection 0.74  
0.48  
6 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling
Mock 3 h Effect of ethylene inhibitors on seedlings 0.71  
0.44  
7 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves
Mock 6 h (leaf) Elicitor treatments 0.69  
0.51  
8 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.64  
-0.54  
9 Selenate (root) WS Selenate 40 µM /
root
Ws (root) GEO bulk 0.63  
0.43  
10 Mutant tga2_5_6 tga2 5 6 mock / seedling Col-0 GEO bulk 0.62  
0.01  
11 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves
Col-0 (AvrRpt2) GEO bulk 0.62  
0.47  
12 Prohexadione 12 h Col-0 10 µM prohexadione /
seedling
Mock 12 h Effect of GA inhibitors on seedlings 0.60  
0.40  
13 DC3000 hrcC 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 hrcC-
harvested after 2h /
leaves
Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection -0.56  
-0.19  
14 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.55  
0.73  
15 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.55  
0.17  
16 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling
Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.53  
0.36  
17 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots
Stress mock 24 h (root) Stress treatments 0.52  
0.26  
18 Mutant cry1 (High Light) cry1 high light: 1000
µmol quanta m-2 s-1
/ seedling
Col-0 (High Light) GEO bulk -0.52  
-0.26  
19 Shoot apex vegetative &Young leaves Col-0 no treatment / shoot
apex, vegetative and
young leaves
Control for tissue data Developmental series; organs / tissues at different ages 0.51  
0.02  
20 Mutant phyA (Dark) phyA Dark / seedling Wild type(Dark) GEO bulk 0.51  
0.13  
21 Estradiol4 days Col Estradiol 10 µM /
seedling
Col GEO bulk -0.51  
0.24  
22 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots
Stress mock 3 h (shoot) Stress treatments 0.50  
0.41  
23 Expanding leaf Col-0 no treatment / leaves
(CAGE, long days)
Control for tissue data Developmental series; organs / tissues at different ages -0.50  
-0.25  
24 Mutant cry1 cry1 Continuous white light /
seedling
Col-0 GEO bulk -0.50  
-0.24  
25 Mutant iaa5_6_19 iaa5 iaa6 iaa19 mock / seedling Col GEO bulk 0.48  
0.57  
26 Mutant arf2-6 arf2-6 mock / seedling Col GEO bulk -0.29  
-0.50  
27 ACC 1 h Col-0 10 µM ACC / seedling Mock 1 h Basic hormone treatment of seedlings 0.27  
0.50  
28 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 0.25  
0.52  
29 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves
Mock 4 h (leaf) Elicitor treatments 0.23  
0.52  
30 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings
Mock 3 h Effect of other inhibitors on seedlings 0.21  
0.57