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Mutant gh3.5-1D (AvrRpt2)
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves
Col-0 (AvrRpt2) GEO bulk 1.00  
1.00  
2 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots
Stress mock 24 h (shoot) Stress treatments 0.78  
0.69  
3 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling
Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.73  
0.50  
4 Senescing leaf Col-0 no treatment / senescing
leaves
Control for tissue data Developmental series; organs / tissues at different ages 0.73  
0.61  
5 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals
Control for tissue data Developmental series; organs / tissues at different ages 0.72  
0.53  
6 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves
Mock 6 h (leaf) Elicitor treatments 0.67  
0.64  
7 Mutant gh3.5-1D gh3.5-1D no treatment / leaves Col-0 GEO bulk 0.67  
0.76  
8 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots
Stress mock 24 h (shoot) Stress treatments 0.65  
0.66  
9 Seeds stage8 w/o siliques Col-0 no treatment / seeds
stage 8, w/o siliques
(long days)
Control for tissue data Developmental series; organs / tissues at different ages 0.65  
0.18  
10 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves
Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.64  
0.69  
11 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves
Mock 4 h (leaf) Elicitor treatments 0.64  
0.60  
12 ABA 3 h Col-0 10 µM ABA / seedling Mock 3 h Basic hormone treatment of seedlings 0.63  
0.45  
13 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves
Mock 4 h (leaf) Elicitor treatments 0.62  
0.54  
14 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves
Mock 4 h (leaf) Elicitor treatments 0.60  
0.57  
15 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.60  
0.27  
16 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.58  
0.33  
17 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots
Stress mock 24 h (root) Stress treatments 0.58  
0.39  
18 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves
Mock 4 h (leaf) Elicitor treatments 0.58  
0.70  
19 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified
Col-0 (Drought) GEO bulk 0.58  
0.33  
20 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves
Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.57  
0.53  
21 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves
Mock 4 h (leaf) Elicitor treatments 0.57  
0.70  
22 Mutant axr3-1 axr3-1 mock / seedling Col GEO bulk 0.56  
0.29  
23 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling
Col-0 GEO bulk 0.56  
0.36  
24 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling
Mock 3 h Effect of ethylene inhibitors on seedlings 0.55  
0.41  
25 OPDA 4 h Col 75 µM OPDA /
seedling
Col-0 GEO bulk 0.52  
0.41  
26 ARR21C-ox ARR21C-ox no treatment / seedling Col-0 ARR21C overexpression 0.51  
0.30  
27 Cold Stress 24 h (shoot) Col-0 cold stress (4˚) /
shoots
Stress mock 24 h (shoot) Stress treatments 0.51  
0.51  
28 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots
Stress mock 24 h (root) Stress treatments 0.51  
0.32  
29 Rosette leaf No12 gl1-T no treatment / rosette
leaf #12
Control for tissue data Developmental series; organs / tissues at different ages -0.51  
-0.30  
30 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf
Mock 18 h Botrytis cinerea infection 0.51  
0.45  
31 Mutant ein2(leaf) ein2 no treatment / leaves Col-0 (leaf) GEO bulk -0.51  
-0.46  
32 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves
Mock 4 h (leaf) Elicitor treatments 0.50  
0.66  
33 Petiol (leaf7) Col-0 no treatment / leaf 7,
petiole
Control for tissue data Developmental series; organs / tissues at different ages -0.50  
-0.18  
34 Mutant iaa5_6_19 iaa5 iaa6 iaa19 mock / seedling Col GEO bulk 0.48  
0.53  
35 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling
Mock 1 h Basic hormone treatment of seedlings 0.47  
0.62  
36 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 0.41  
0.56  
37 Blue Light 4 h Col-0 continuous Blue Light /
seedlings
White Light 4 h Light treatments 0.37  
0.51  
38 FarRed Light 4 h Col-0 continuous far red light
/ seedlings
White Light 4 h Light treatments 0.35  
0.50  
39 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling
Mock 3 h Basic hormone treatment of seedlings 0.34  
0.55  
40 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings
Mock 3 h Effect of other inhibitors on seedlings 0.26  
0.54  
41 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.23  
0.65