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Phytoprostane A1 4 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling		 Col-0 GEO bulk 1.00  
1.00  
2 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.85  
0.83  
3 OPDA 4 h Col 75 µM OPDA /
seedling		 Col-0 GEO bulk 0.84  
0.55  
4 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.70  
0.73  
5 ARR21C-ox ARR21C-ox no treatment / seedling Col-0 ARR21C overexpression 0.69  
0.39  
6 Salicylic Acid 3 h Col-0 10µM salicylic acid
/ seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.68  
0.37  
7 PNO8 12 h Col-0 1 µM PNO8 /
seedlings		 Mock 12 h Effect of other inhibitors on seedlings 0.66  
0.12  
8 2,4,6-trichlorophenoxyacetic acid 3 h Col-0 10 µM 2,4,6T /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.64  
0.76  
9 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.64  
0.46  
10 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 0.62  
0.45  
11 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.60  
0.55  
12 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots		 Stress mock 24 h (root) Stress treatments 0.60  
0.42  
13 K starvation (root) ws-2 K starvation / root Ws (root) GEO bulk 0.60  
0.57  
14 Selenate (root) WS Selenate 40 µM /
root		 Ws (root) GEO bulk 0.58  
0.45  
15 PNO8 3 h Col-0 1 µM PNO8 /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.57  
0.69  
16 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.57  
0.51  
17 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.57  
0.29  
18 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.56  
0.44  
19 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.53  
0.81  
20 Fe starvation 72 h Col Fe starvation / whole
roots		 Control GEO bulk 0.53  
0.41  
21 Norflurazon Col-0 5 µM Norflurazon /
seedling		 Col-0 GEO bulk 0.52  
0.39  
22 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.51  
0.24  
23 Cold Stress 24 h (root) Col-0 cold stress (4˚) /
roots		 Stress mock 24 h (root) Stress treatments 0.51  
0.41  
24 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.51  
0.48  
25 Mutant axr3-1 axr3-1 mock / seedling Col GEO bulk 0.51  
0.63  
26 Mutant arf2 (etiol) arf2 mock / etiol seedling Col (etiol) GEO bulk 0.51  
0.36  
27 Brz220 12 h Col-0 10 µM BRZ220 /
seedling		 Mock 12 h Effect of brassinosteroid inhibitors on seedlings 0.46  
0.54  
28 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.45  
0.67  
29 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.41  
0.59  
30 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 0.40  
0.56  
31 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.38  
0.59  
32 Mutant axr3-1 (IAA) axr3-1 5 µM IAA / seedling Col (IAA) GEO bulk 0.37  
0.71  
33 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.36  
0.56  
34 FarRed Light 4 h Col-0 continuous far red light
/ seedlings		 White Light 4 h Light treatments 0.33  
0.62  
35 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.33  
0.54  
36 Mutant cry1 (High Light) cry1 high light: 1000
µmol quanta m-2 s-1
/ seedling		 Col-0 (High Light) GEO bulk -0.31  
-0.51  
37 Estradiol4 days Col Estradiol 10 µM /
seedling		 Col GEO bulk 0.29  
0.50  
38 Brassinolide 1 h (det2) det2-1 10 nM brassinolide /
seedling		 Mock 1 h (det2) Basic hormone treatment of seedlings 0.05  
-0.51  
39 FarRed Light 45min Col-0 continuous far red light
/ seedlings		 White Light 45min Light treatments 0.04  
-0.50