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Phaseolicola 2 h (leaf)
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 1.00  
1.00  
2 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.87  
0.91  
3 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.85  
0.81  
4 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.85  
0.81  
5 AvrRpm1 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato avrRpm1 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.84  
0.86  
6 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.83  
0.76  
7 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.81  
0.77  
8 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.80  
0.65  
9 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.77  
0.50  
10 DC3000 hrcC 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 hrcC-
harvested after 2h /
leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.77  
0.83  
11 Cycloheximide 3 h Col-0 10 µM CHX /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.76  
0.61  
12 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.75  
0.59  
13 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.75  
0.82  
14 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.75  
0.70  
15 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified		 Col-0 (Drought) GEO bulk 0.73  
0.56  
16 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.73  
0.62  
17 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.72  
0.72  
18 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 0.67  
0.51  
19 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.66  
0.48  
20 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk 0.66  
0.58  
21 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.65  
0.57  
22 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.62  
0.59  
23 Mature pollen Col-0 no treatment / mature
pollen		 Control for tissue data Developmental series; organs / tissues at different ages 0.60  
0.28  
24 Fe starvation 72 h Col Fe starvation / whole
roots		 Control GEO bulk 0.59  
0.24  
25 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling		 Col-0 GEO bulk 0.59  
0.41  
26 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.57  
0.49  
27 E.orontii Infection 3 day Col-0 E.orontii Infection 3
day / leaves		 Uninfection 3 day Elicitor treatments 0.56  
0.25  
28 Mature roots Col-0 no treatment / roots Control for tissue data Developmental series; organs / tissues at different ages 0.55  
0.41  
29 Mutant iaa17-6 (IAA) iaa17-6 5 µM IAA / seedling Col (IAA) GEO bulk 0.54  
0.46  
30 Salicylic Acid 3 h Col-0 10µM salicylic acid
/ seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.53  
0.10  
31 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.53  
0.60  
32 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.53  
0.18  
33 Mutant arf2 (etiol) arf2 mock / etiol seedling Col (etiol) GEO bulk 0.53  
0.46  
34 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.53  
0.57  
35 IAA 3 h Col-0 1 µM IAA / seedling Mock 3 h Basic hormone treatment of seedlings 0.52  
0.31  
36 ARR21C-ox ARR21C-ox no treatment / seedling Col-0 ARR21C overexpression 0.52  
0.38  
37 Flowers stage15 Col-0 no treatment / flowers
stage 15		 Control for tissue data Developmental series; organs / tissues at different ages 0.50  
0.29  
38 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.49  
0.55  
39 2,4,6-trichlorophenoxyacetic acid 3 h Col-0 10 µM 2,4,6T /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.39  
0.51  
40 Mutant sav3-2 (WL) sav3-2 Continuous white light /
seedling		 Col-0 (WL) GEO bulk -0.23  
-0.51