AT2G10465 : -
Query Information
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AGICode AT2G10465
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G10465 transposable element gene 1 0.32 -0.31
2 AT5G45630 Protein of unknown function, DUF584 0.68 0.31 -0.31
3 AT2G20770 GCR2-like 2 GCR2-like 2 0.68 0.34 -0.33
4 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.67 0.33 -0.32
5 AT1G41810 transposable element gene 0.66 0.32 -0.32
6 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.66 0.35 -0.33
7 AT5G61970 signal recognition particle-related / SRP-related -0.64 0.3 -0.3
8 AT2G21390 Coatomer, alpha subunit -0.62 0.33 -0.32
9 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.33 -0.33
10 AT5G58820 Subtilisin-like serine endopeptidase family protein 0.62 0.32 -0.32
11 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.62 0.32 -0.29
12 AT2G36030 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.33 -0.31
13 AT3G17430 Nucleotide-sugar transporter family protein -0.61 0.32 -0.34
14 AT2G15042 Leucine-rich repeat (LRR) family protein 0.6 0.3 -0.32
15 AT5G42320 Zn-dependent exopeptidases superfamily protein -0.6 0.31 -0.36
16 AT1G73240 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup
(InterPro:IPR019049); Has 36 Blast hits to 36 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.33 -0.33
17 AT3G25160 ER lumen protein retaining receptor family protein 0.6 0.3 -0.32
18 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 -0.6 0.3 -0.29
19 AT3G10540 3-phosphoinositide-dependent protein kinase -0.6 0.34 -0.33
20 AT5G24750 UDP-Glycosyltransferase superfamily protein 0.59 0.33 -0.32
21 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.3 -0.31
22 AT1G33920 phloem protein 2-A4 phloem protein 2-A4, phloem
protein 2-A4		 0.59 0.32 -0.3
23 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.33 -0.3
24 AT5G59660 Leucine-rich repeat protein kinase family protein 0.58 0.33 -0.32
25 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein 0.58 0.32 -0.31
26 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein -0.58 0.31 -0.3
27 AT5G04180 alpha carbonic anhydrase 3 alpha carbonic anhydrase 3, ALPHA
CARBONIC ANHYDRASE 3		 0.58 0.31 -0.34
28 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding 0.58 0.32 -0.32
29 AT5G05520 Outer membrane OMP85 family protein -0.57 0.31 -0.33
30 AT5G55500 beta-1,2-xylosyltransferase ARABIDOPSIS THALIANA
BETA-1,2-XYLOSYLTRANSFERASE,
beta-1,2-xylosyltransferase		 -0.57 0.32 -0.32
31 AT1G64290 F-box protein-related 0.57 0.31 -0.31
32 AT4G13980 winged-helix DNA-binding transcription factor family
protein		 AT-HSFA5, HEAT SHOCK TRANSCRIPTION
FACTOR A5		 0.57 0.33 -0.3
33 AT5G53480 ARM repeat superfamily protein -0.57 0.31 -0.32
34 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.32 -0.31
35 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 -0.57 0.34 -0.3
36 AT1G03720 Cysteine proteinases superfamily protein -0.57 0.31 -0.34
37 AT2G15520 transposable element gene 0.56 0.31 -0.33
38 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.31 -0.32
39 AT3G29380 Cyclin-like family protein plant-specific TFIIB-related
protein 2		 0.56 0.33 -0.32
40 AT1G53540 HSP20-like chaperones superfamily protein 0.56 0.33 -0.32
41 AT3G30846 transposable element gene 0.56 0.29 -0.32
42 AT5G19980 golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter
4		 -0.56 0.31 -0.31
43 AT5G06020 Plant self-incompatibility protein S1 family 0.56 0.32 -0.32
44 AT5G14950 golgi alpha-mannosidase II ATGMII, golgi alpha-mannosidase II -0.55 0.35 -0.31
45 AT3G08960 ARM repeat superfamily protein -0.55 0.3 -0.33
46 AT3G17180 serine carboxypeptidase-like 33 serine carboxypeptidase-like 33 0.55 0.31 -0.32
47 AT3G12050 Aha1 domain-containing protein -0.55 0.31 -0.31
48 AT4G24020 NIN like protein 7 NIN like protein 7 0.55 0.31 -0.35
49 AT5G29020 transposable element gene 0.55 0.3 -0.32
50 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein 0.55 0.29 -0.32
51 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.55 0.29 -0.31
52 AT5G54050 Cysteine/Histidine-rich C1 domain family protein 0.55 0.32 -0.28
53 AT1G72270 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G27010.1); Has
772 Blast hits to 657 proteins in 120 species: Archae - 0;
Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322;
Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).		 0.54 0.31 -0.3
54 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 0.54 0.32 -0.34
55 AT3G01240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01230.1); Has 12 Blast hits to 12 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.54 0.3 -0.33
56 AT1G77240 AMP-dependent synthetase and ligase family protein 0.54 0.32 -0.31
57 AT5G26630 MADS-box transcription factor family protein 0.54 0.29 -0.34
58 AT5G53480 ARM repeat superfamily protein -0.54 0.29 -0.33
59 AT3G30230 myosin heavy chain-related 0.54 0.33 -0.32
60 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.54 0.3 -0.31
61 AT1G71880 sucrose-proton symporter 1 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 1,
sucrose-proton symporter 1		 -0.54 0.32 -0.31
62 AT1G17960 Threonyl-tRNA synthetase -0.53 0.33 -0.32
63 AT5G51320 transposable element gene 0.53 0.31 -0.3
64 AT2G33520 unknown protein; Has 68 Blast hits to 68 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.53 0.32 -0.34
65 AT5G37530 NAD(P)-binding Rossmann-fold superfamily protein -0.53 0.29 -0.32
66 AT2G10370 transposable element gene 0.53 0.31 -0.32
67 AT1G22090 Protein of unknown function (DUF626) embryo defective 2204 0.53 0.32 -0.32
68 AT4G17505 Protein of Unknown Function (DUF239) -0.52 0.3 -0.32
69 AT3G23650 protein kinase-related 0.52 0.31 -0.31
70 AT2G05950 transposable element gene 0.52 0.3 -0.32
71 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 -0.52 0.32 -0.3
72 AT2G13310 transposable element gene -0.51 0.32 -0.34
73 AT1G60400 F-box/RNI-like superfamily protein 0.51 0.31 -0.32
74 AT2G46840 DOMAIN OF UNKNOWN FUNCTION 724 4 DOMAIN OF UNKNOWN FUNCTION 724 4,
DOMAIN OF UNKNOWN FUNCTION 724 4		 0.51 0.32 -0.32
75 AT1G64830 Eukaryotic aspartyl protease family protein -0.51 0.31 -0.29
76 AT2G05720 Transducin/WD40 repeat-like superfamily protein 0.51 0.31 -0.32
77 AT2G02340 phloem protein 2-B8 phloem protein 2-B8, phloem
protein 2-B8		 0.51 0.33 -0.32
78 AT5G61280 Remorin family protein 0.51 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.8 0.46 -0.47 C0109
80 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.77 0.48 -0.46 C0032
81 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.75 0.43 -0.47 C0056
82 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.72 0.43 -0.44 C0087
83 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.71 0.45 -0.44 C0107
84 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.7 0.48 -0.44 C0099
85 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.69 0.42 -0.42 C0011
86 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.68 0.44 -0.41 C0195
87 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.66 0.48 -0.49 C0030
88 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.65 0.47 -0.48 C0053
89 C0006 β-Homothreonine L-β-Homothreonine - - 0.65 0.45 -0.45
90 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.64 0.45 -0.44 C0075
91 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.61 0.46 -0.43 C0027
92 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.56 0.31 -0.32 C0005
93 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		0.51 0.32 -0.31 C0022