AT2G32220 : -
Query Information
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AGICode AT2G32220
Description Ribosomal L27e protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G32220 Ribosomal L27e protein family 1 0.32 -0.32
2 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.91 0.32 -0.33
3 AT3G25940 TFIIB zinc-binding protein 0.9 0.31 -0.33
4 AT2G44860 Ribosomal protein L24e family protein 0.88 0.31 -0.31
5 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.87 0.33 -0.32
6 AT2G45710 Zinc-binding ribosomal protein family protein 0.86 0.29 -0.32
7 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.86 0.32 -0.31
8 AT2G39390 Ribosomal L29 family protein 0.86 0.31 -0.33
9 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.85 0.32 -0.31
10 AT2G04520 Nucleic acid-binding, OB-fold-like protein 0.85 0.3 -0.31
11 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.84 0.32 -0.32
12 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.84 0.33 -0.31
13 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.84 0.32 -0.31
14 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.84 0.31 -0.29
15 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.84 0.33 -0.32
16 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.84 0.3 -0.3
17 AT1G54770 Fcf2 pre-rRNA processing protein 0.83 0.32 -0.3
18 AT1G66070 Translation initiation factor eIF3 subunit 0.83 0.32 -0.32
19 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.83 0.33 -0.32
20 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.83 0.33 -0.3
21 AT4G15770 RNA binding 0.83 0.3 -0.31
22 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.83 0.32 -0.33
23 AT3G13230 RNA-binding KH domain-containing protein 0.83 0.33 -0.31
24 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.82 0.31 -0.31
25 AT3G07230 wound-responsive protein-related 0.82 0.32 -0.27
26 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.82 0.32 -0.31
27 AT1G48570 zinc finger (Ran-binding) family protein 0.82 0.28 -0.29
28 AT4G33865 Ribosomal protein S14p/S29e family protein 0.82 0.32 -0.32
29 AT4G28450 nucleotide binding;protein binding 0.82 0.31 -0.3
30 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.82 0.34 -0.29
31 AT1G74270 Ribosomal protein L35Ae family protein 0.81 0.31 -0.29
32 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.81 0.29 -0.31
33 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 0.81 0.33 -0.31
34 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.81 0.34 -0.3
35 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.81 0.3 -0.32
36 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.81 0.32 -0.3
37 AT3G48570 secE/sec61-gamma protein transport protein 0.8 0.32 -0.3
38 AT2G42710 Ribosomal protein L1p/L10e family 0.8 0.32 -0.32
39 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.8 0.32 -0.33
40 AT4G31985 Ribosomal protein L39 family protein 0.8 0.31 -0.29
41 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.8 0.31 -0.32
42 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.8 0.31 -0.31
43 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.8 0.3 -0.31
44 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.8 0.32 -0.31
45 AT4G38710 glycine-rich protein 0.8 0.31 -0.35
46 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.8 0.31 -0.31
47 AT1G22270 Trm112p-like protein 0.8 0.34 -0.33
48 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.79 0.3 -0.33
49 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.31 -0.3
50 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.79 0.31 -0.34
51 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 0.79 0.32 -0.3
52 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.32 -0.33
53 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.31 -0.3
54 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.79 0.28 -0.32
55 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.32 -0.32
56 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.79 0.32 -0.31
57 AT2G44510 CDK inhibitor P21 binding protein 0.79 0.31 -0.31
58 AT5G02470 Transcription factor DP DPA 0.78 0.32 -0.31
59 AT1G15250 Zinc-binding ribosomal protein family protein 0.78 0.31 -0.29
60 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.78 0.31 -0.31
61 AT2G16430 purple acid phosphatase 10 ATPAP10, purple acid phosphatase
10		 0.78 0.31 -0.33
62 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.78 0.32 -0.32
63 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.31 -0.31
64 AT2G46170 Reticulon family protein 0.78 0.31 -0.31
65 AT3G62940 Cysteine proteinases superfamily protein 0.78 0.34 -0.33
66 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.77 0.33 -0.31
67 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.77 0.31 -0.31
68 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.77 0.33 -0.32
69 AT4G02230 Ribosomal protein L19e family protein 0.77 0.32 -0.31
70 AT3G17609 HY5-homolog HY5-homolog 0.77 0.32 -0.31
71 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.77 0.29 -0.34
72 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.77 0.32 -0.32
73 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.77 0.3 -0.33
74 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.76 0.31 -0.29
75 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.32 -0.3
76 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.74 0.31 -0.31
77 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.71 0.33 -0.31
78 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.7 0.33 -0.32
79 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.69 0.32 -0.33
80 AT3G48710 DEK domain-containing chromatin associated protein -0.67 0.31 -0.32
81 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.67 0.31 -0.32
82 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.67 0.31 -0.31
83 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.67 0.33 -0.32
84 AT5G54690 galacturonosyltransferase 12 galacturonosyltransferase 12,
IRREGULAR XYLEM 8, LGT6		 -0.66 0.31 -0.31
85 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.65 0.32 -0.32
86 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.64 0.32 -0.33
87 AT3G54390 sequence-specific DNA binding transcription factors -0.64 0.31 -0.32
88 AT5G14510 ARM repeat superfamily protein -0.64 0.32 -0.31
89 AT1G79420 Protein of unknown function (DUF620) -0.63 0.3 -0.31
90 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.32
91 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.61 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.76 0.43 -0.44 C0056
93 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.75 0.43 -0.45 C0032
94 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.72 0.34 -0.32 C0142
95 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.71 0.43 -0.43 C0053
96 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.7 0.45 -0.45 C0099
97 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.7 0.3 -0.3 C0054
98 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.7 0.3 -0.32 C0260
99 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.69 0.32 -0.32 C0097
100 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.67 0.46 -0.43
101 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.66 0.4 -0.45 C0234
102 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.65 0.32 -0.3 C0005
103 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.65 0.45 -0.44 C0091
104 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		-0.62 0.31 -0.32 C0022