AT2G07230 : -
Query Information
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AGICode AT2G07230
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G07230 transposable element gene 1 0.3 -0.33
2 AT3G14030 F-box associated ubiquitination effector family protein 0.61 0.31 -0.3
3 AT1G21950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G21940.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.31
4 AT4G38940 Galactose oxidase/kelch repeat superfamily protein -0.59 0.32 -0.32
5 AT3G51190 Ribosomal protein L2 family 0.58 0.29 -0.33
6 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.57 0.3 -0.31
7 AT1G26090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.55 0.32 -0.31
8 AT5G20760 transposable element gene -0.54 0.32 -0.3
9 AT3G60720 plasmodesmata-located protein 8 plasmodesmata-located protein 8 0.54 0.32 -0.3
10 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.53 0.31 -0.31
11 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 0.53 0.34 -0.3
12 AT1G11630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.53 0.32 -0.31
13 AT1G53540 HSP20-like chaperones superfamily protein 0.53 0.32 -0.3
14 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.53 0.31 -0.32
15 AT3G22700 F-box and associated interaction domains-containing protein -0.53 0.32 -0.3
16 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 -0.53 0.32 -0.3
17 AT3G31403 transposable element gene -0.52 0.32 -0.33
18 AT1G73840 hydroxyproline-rich glycoprotein family protein ENHANCED SILENCING PHENOTYPE 1 0.52 0.32 -0.32
19 AT4G28830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.52 0.31 -0.34
20 AT1G01280 cytochrome P450, family 703, subfamily A, polypeptide 2 CYP703, cytochrome P450, family
703, subfamily A, polypeptide 2		 0.51 0.31 -0.31
21 AT1G20700 WUSCHEL related homeobox 14 WUSCHEL RELATED HOMEOBOX 14,
WUSCHEL related homeobox 14		 -0.51 0.35 -0.3
22 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.51 0.34 -0.32
23 AT5G03980 SGNH hydrolase-type esterase superfamily protein 0.5 0.32 -0.32
24 AT3G04410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.5 0.31 -0.33
25 AT1G80020 transposable element gene -0.5 0.28 -0.32
26 AT2G18920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: synergid; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.5 0.32 -0.3
27 AT1G68840 related to ABI3/VP1 2 AtRAV2, ETHYLENE RESPONSE DNA
BINDING FACTOR 2, RELATED TO AP2
8, related to ABI3/VP1 2,
TEMPRANILLO 2		 -0.49 0.29 -0.31
28 AT4G04510 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 cysteine-rich RLK (RECEPTOR-like
protein kinase) 38		 -0.49 0.31 -0.32
29 AT2G26490 Transducin/WD40 repeat-like superfamily protein -0.48 0.32 -0.29
30 AT1G67290 glyoxal oxidase-related protein glyoxal oxidase 1 0.48 0.32 -0.31
31 AT5G55080 ras-related nuclear protein 4 ras-related nuclear protein 4,
ras-related nuclear protein 4		 -0.48 0.3 -0.31
32 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.3 -0.34
33 AT2G17490 transposable element gene 0.47 0.33 -0.31
34 AT5G65180 ENTH/VHS family protein -0.47 0.33 -0.32
35 AT5G28270 transposable element gene -0.47 0.3 -0.32
36 AT2G26720 Cupredoxin superfamily protein -0.46 0.32 -0.31
37 AT5G24260 prolyl oligopeptidase family protein 0.46 0.31 -0.32
38 AT1G64830 Eukaryotic aspartyl protease family protein -0.46 0.32 -0.31
39 AT1G32880 ARM repeat superfamily protein -0.46 0.31 -0.3
40 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.46 0.33 -0.32
41 AT2G16610 transposable element gene 0.45 0.3 -0.31
42 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein 0.45 0.32 -0.32
43 AT3G60170 transposable element gene -0.44 0.32 -0.31
44 AT4G19730 Glycosyl hydrolase superfamily protein -0.44 0.31 -0.32
45 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein -0.44 0.35 -0.32
46 AT3G43840 3-oxo-5-alpha-steroid 4-dehydrogenase family protein -0.44 0.31 -0.3
47 AT5G60440 AGAMOUS-like 62 AGAMOUS-like 62 -0.44 0.32 -0.3
48 AT5G32600 transposable element gene -0.43 0.32 -0.34
49 AT5G40430 myb domain protein 22 myb domain protein 22, myb domain
protein 22		 -0.43 0.33 -0.31
50 AT5G48770 Disease resistance protein (TIR-NBS-LRR class) family -0.42 0.33 -0.28
51 AT1G55950 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.41 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
52 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.75 0.46 -0.46 C0099
53 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.73 0.43 -0.45 C0056
54 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.7 0.44 -0.41 C0073
55 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.7 0.42 -0.45 C0011
56 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.7 0.44 -0.45
57 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.69 0.47 -0.44
58 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.69 0.41 -0.43 C0234
59 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.68 0.44 -0.44 C0032
60 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.65 0.44 -0.46 C0053
61 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.58 0.32 -0.32 C0005
62 C0113 Histidinol - Histidinol histidine biosynthesis 0.53 0.31 -0.33 C0113
63 C0104 Glutathione - Glutathione glucosinolate biosynthesis from tryptophan,
glutathione redox reactions I,
glutathione degradation,
gamma-glutamyl cycle (plant pathway),
indole glucosinolate breakdown (active in intact plant cell),
selenate reduction,
glutathione redox reactions II,
glucosinolate biosynthesis from trihomomethionine,
ascorbate glutathione cycle,
glucosinolate biosynthesis from pentahomomethionine,
camalexin biosynthesis,
glucosinolate biosynthesis from homomethionine,
glucosinolate biosynthesis from phenylalanine,
methylglyoxal degradation I,
sulfate reduction II (assimilatory),
glucosinolate biosynthesis from dihomomethionine,
indole glucosinolate breakdown (insect chewing induced),
glutathione biosynthesis,
formaldehyde oxidation II (glutathione-dependent),
glutathione-mediated detoxification II,
glucosinolate biosynthesis from tetrahomomethionine,
glucosinolate biosynthesis from hexahomomethionine,
gamma-glutamyl cycle 		0.46 0.33 -0.31 C0104