ID | C0053 |
Compound name | ADP |
External link | http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=ADP |
Pathway Information | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
0.83 | 0.5 | -0.47 | ||
2 | AT2G34840 | Coatomer epsilon subunit | 0.82 | 0.43 | -0.46 | |||
3 | AT3G22250 | UDP-Glycosyltransferase superfamily protein | 0.82 | 0.48 | -0.46 | |||
4 | AT2G21800 | essential meiotic endonuclease 1A | essential meiotic endonuclease 1A, EME1A, essential meiotic endonuclease 1A |
-0.77 | 0.43 | -0.46 | ||
5 | AT3G43660 | Vacuolar iron transporter (VIT) family protein | -0.77 | 0.45 | -0.43 | |||
6 | AT5G46710 | PLATZ transcription factor family protein | -0.76 | 0.48 | -0.48 | |||
7 | AT3G22480 | prefoldin 2 | prefoldin 2 | -0.76 | 0.49 | -0.49 | ||
8 | AT1G05030 | Major facilitator superfamily protein | 0.76 | 0.44 | -0.41 | |||
9 | AT3G56090 | ferritin 3 | ferritin 3, ferritin 3 | -0.76 | 0.43 | -0.47 | ||
10 | AT1G44770 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.75 | 0.45 | -0.45 | |||
11 | AT3G61840 | Protein of unknown function (DUF688) | 0.75 | 0.47 | -0.45 | |||
12 | AT4G01910 | Cysteine/Histidine-rich C1 domain family protein | 0.75 | 0.44 | -0.43 | |||
13 | AT5G09250 | ssDNA-binding transcriptional regulator | KIWI | -0.75 | 0.48 | -0.47 | ||
14 | AT1G63810 | CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). |
-0.74 | 0.46 | -0.46 | |||
15 | AT3G57980 | DNA-binding bromodomain-containing protein | 0.74 | 0.45 | -0.45 | |||
16 | AT4G32120 | Galactosyltransferase family protein | -0.74 | 0.42 | -0.44 | |||
17 | AT2G45710 | Zinc-binding ribosomal protein family protein | -0.73 | 0.44 | -0.44 | |||
18 | AT3G49890 | unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.73 | 0.45 | -0.45 | |||
19 | AT3G44950 | glycine-rich protein | 0.73 | 0.46 | -0.45 | |||
20 | AT2G13570 | nuclear factor Y, subunit B7 | nuclear factor Y, subunit B7 | -0.73 | 0.47 | -0.48 | ||
21 | AT3G25160 | ER lumen protein retaining receptor family protein | 0.73 | 0.45 | -0.45 | |||
22 | AT5G62070 | IQ-domain 23 | IQ-domain 23 | -0.73 | 0.45 | -0.46 | ||
23 | AT3G20760 | Nse4, component of Smc5/6 DNA repair complex | -0.73 | 0.43 | -0.44 | |||
24 | AT5G20310 | Adenine nucleotide alpha hydrolases-like superfamily protein |
0.72 | 0.44 | -0.45 | |||
25 | AT5G16150 | plastidic GLC translocator | GLUCOSE TRANSPORTER 1, plastidic GLC translocator |
0.72 | 0.46 | -0.44 | ||
26 | AT5G14510 | ARM repeat superfamily protein | 0.72 | 0.44 | -0.44 | |||
27 | AT1G06710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.71 | 0.44 | -0.46 | |||
28 | AT5G24850 | cryptochrome 3 | cryptochrome 3 | -0.71 | 0.45 | -0.41 | ||
29 | AT3G30340 | nodulin MtN21 /EamA-like transporter family protein | 0.71 | 0.47 | -0.45 | |||
30 | AT1G63660 | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative |
-0.71 | 0.45 | -0.45 | |||
31 | AT2G32220 | Ribosomal L27e protein family | -0.71 | 0.46 | -0.43 | |||
32 | AT1G09510 | NAD(P)-binding Rossmann-fold superfamily protein | 0.71 | 0.46 | -0.43 | |||
33 | AT2G47310 | flowering time control protein-related / FCA gamma-related | 0.71 | 0.44 | -0.42 | |||
34 | AT1G03720 | Cysteine proteinases superfamily protein | -0.71 | 0.49 | -0.47 | |||
35 | AT5G22650 | histone deacetylase 2B | ARABIDOPSIS HISTONE DEACETYLASE 2, ATHD2B, HISTONE DEACETYLASE 2, histone deacetylase 2B, HDA4, HDT02, HDT2 |
-0.71 | 0.43 | -0.45 | ||
36 | AT2G48110 | reduced epidermal fluorescence 4 | MED33B, REDUCED EPIDERMAL FLUORESCENCE 4 |
0.71 | 0.46 | -0.43 | ||
37 | AT5G06670 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.7 | 0.42 | -0.46 | |||
38 | AT5G46400 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT PRP39-2, PRP39-2 | 0.7 | 0.45 | -0.45 | ||
39 | AT3G56270 | Plant protein of unknown function (DUF827) | 0.7 | 0.45 | -0.42 | |||
40 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.7 | 0.45 | -0.43 | |||
41 | AT5G13740 | zinc induced facilitator 1 | zinc induced facilitator 1 | 0.7 | 0.48 | -0.47 | ||
42 | AT3G48710 | DEK domain-containing chromatin associated protein | 0.7 | 0.43 | -0.45 | |||
43 | AT2G14460 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.7 | 0.44 | -0.45 | |||
44 | AT4G24240 | WRKY DNA-binding protein 7 | ATWRKY7, WRKY DNA-binding protein 7 |
-0.7 | 0.46 | -0.44 | ||
45 | AT1G75190 | unknown protein; Has 7306 Blast hits to 3858 proteins in 279 species: Archae - 15; Bacteria - 134; Metazoa - 3314; Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes - 2862 (source: NCBI BLink). |
-0.7 | 0.46 | -0.46 | |||
46 | AT4G26980 | RNI-like superfamily protein | 0.7 | 0.45 | -0.42 | |||
47 | AT1G50910 | unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). |
-0.69 | 0.44 | -0.41 | |||
48 | AT3G06433 | pseudogene of nodulin MtN3 family protein | 0.69 | 0.43 | -0.43 | |||
49 | AT2G20460 | transposable element gene | 0.69 | 0.46 | -0.43 | |||
50 | AT5G41600 | VIRB2-interacting protein 3 | VIRB2-interacting protein 3, Reticulan like protein B4 |
-0.69 | 0.44 | -0.42 | ||
51 | AT4G21150 | ribophorin II (RPN2) family protein | HAPLESS 6 | -0.69 | 0.45 | -0.42 | ||
52 | AT3G52040 | unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.45 | -0.45 | |||
53 | AT4G27380 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.48 | -0.45 | |||
54 | AT4G28710 | Myosin family protein with Dil domain | MYOSIN XI H, XIH | 0.69 | 0.44 | -0.41 | ||
55 | AT4G24020 | NIN like protein 7 | NIN like protein 7 | 0.69 | 0.44 | -0.45 | ||
56 | AT4G33390 | Plant protein of unknown function (DUF827) | -0.69 | 0.44 | -0.43 | |||
57 | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | -0.69 | 0.43 | -0.44 | |||
58 | AT1G49840 | Protein of unknown function (DUF620) | -0.69 | 0.43 | -0.43 | |||
59 | AT1G54770 | Fcf2 pre-rRNA processing protein | -0.68 | 0.45 | -0.43 | |||
60 | AT5G65500 | U-box domain-containing protein kinase family protein | 0.68 | 0.45 | -0.47 | |||
61 | AT2G06700 | transposable element gene | 0.68 | 0.47 | -0.43 | |||
62 | AT4G27330 | sporocyteless (SPL) | NOZZLE, SPOROCYTELESS | -0.68 | 0.47 | -0.41 | ||
63 | AT5G43440 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.68 | 0.41 | -0.45 | |||
64 | AT3G02190 | Ribosomal protein L39 family protein | -0.68 | 0.46 | -0.43 | |||
65 | AT1G16950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.42 | -0.43 | |||
66 | AT1G59520 | CW7 | CW7 | 0.68 | 0.44 | -0.46 | ||
67 | AT5G19200 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10B | 0.68 | 0.46 | -0.39 | ||
68 | AT4G24400 | CBL-interacting protein kinase 8 | ATCIPK8, CBL-interacting protein kinase 8, PROTEIN KINASE 11, SNF1-RELATED PROTEIN KINASE 3.13 |
0.68 | 0.46 | -0.43 | ||
69 | AT2G04070 | MATE efflux family protein | -0.68 | 0.43 | -0.44 | |||
70 | AT4G18990 | xyloglucan endotransglucosylase/hydrolase 29 | xyloglucan endotransglucosylase/hydrolase 29 |
0.68 | 0.46 | -0.4 | ||
71 | AT1G03100 | Pentatricopeptide repeat (PPR) superfamily protein | -0.68 | 0.47 | -0.5 | |||
72 | AT5G24840 | tRNA (guanine-N-7) methyltransferase | -0.67 | 0.45 | -0.44 | |||
73 | AT3G12140 | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein |
AtEML1, EMSY-like 1 | -0.67 | 0.45 | -0.45 | ||
74 | AT3G14030 | F-box associated ubiquitination effector family protein | 0.67 | 0.44 | -0.45 | |||
75 | AT4G28450 | nucleotide binding;protein binding | -0.67 | 0.44 | -0.42 | |||
76 | AT5G61990 | Pentatricopeptide repeat (PPR) superfamily protein | -0.67 | 0.43 | -0.46 | |||
77 | AT5G16800 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.67 | 0.46 | -0.42 | |||
78 | AT4G27850 | Glycine-rich protein family | 0.67 | 0.44 | -0.46 | |||
79 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | -0.67 | 0.43 | -0.49 | |||
80 | AT2G40300 | ferritin 4 | ferritin 4, ferritin 4 | -0.67 | 0.47 | -0.43 | ||
81 | AT2G11210 | transposable element gene | 0.66 | 0.48 | -0.45 | |||
82 | AT3G01820 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.66 | 0.46 | -0.47 | |||
83 | AT4G16900 | Disease resistance protein (TIR-NBS-LRR class) family | 0.66 | 0.47 | -0.43 | |||
84 | AT5G23640 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.66 | 0.41 | -0.43 | |||
85 | AT1G56710 | Pectin lyase-like superfamily protein | 0.66 | 0.45 | -0.45 | |||
86 | AT5G11760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.66 | 0.45 | -0.44 | |||
87 | AT1G53345 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in 75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi - 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37 (source: NCBI BLink). |
-0.66 | 0.48 | -0.44 | |||
88 | AT2G25670 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). |
-0.66 | 0.45 | -0.46 | |||
89 | AT4G13190 | Protein kinase superfamily protein | -0.66 | 0.41 | -0.46 | |||
90 | AT5G45260 | Disease resistance protein (TIR-NBS-LRR class) | ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, RESISTANT TO RALSTONIA SOLANACEARUM 1, SENSITIVE TO LOW HUMIDITY 1 |
0.66 | 0.44 | -0.44 | ||
91 | AT1G22080 | Cysteine proteinases superfamily protein | 0.66 | 0.41 | -0.48 | |||
92 | AT2G26060 | Transducin/WD40 repeat-like superfamily protein | embryo defective 1345 | -0.66 | 0.44 | -0.42 | ||
93 | AT1G75670 | DNA-directed RNA polymerases | -0.66 | 0.42 | -0.46 | |||
94 | AT2G42700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.66 | 0.45 | -0.42 | |||
95 | AT4G09080 | Outer membrane OMP85 family protein | TRANSLOCON OUTER MEMBRANE COMPLEX 75-IV, translocon at the outer envelope membrane of chloroplasts 75-IV |
-0.66 | 0.45 | -0.45 | ||
96 | AT5G23870 | Pectinacetylesterase family protein | -0.66 | 0.49 | -0.47 | |||
97 | AT2G16430 | purple acid phosphatase 10 | ATPAP10, purple acid phosphatase 10 |
-0.66 | 0.43 | -0.45 | ||
98 | AT5G29020 | transposable element gene | 0.66 | 0.44 | -0.45 | |||
99 | AT4G01220 | Nucleotide-diphospho-sugar transferase family protein | male gametophyte defective 4 | -0.66 | 0.45 | -0.46 | ||
100 | AT1G13130 | Cellulase (glycosyl hydrolase family 5) protein | -0.66 | 0.43 | -0.48 | |||
101 | AT5G22875 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.66 | 0.44 | -0.47 | |||
102 | AT1G22270 | Trm112p-like protein | -0.66 | 0.43 | -0.44 | |||
103 | AT4G23200 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 |
-0.65 | 0.44 | -0.42 | ||
104 | AT2G10465 | transposable element gene | 0.65 | 0.43 | -0.44 | |||
105 | AT3G02300 | Regulator of chromosome condensation (RCC1) family protein | 0.65 | 0.45 | -0.41 | |||
106 | AT3G27670 | ARM repeat superfamily protein | RESURRECTION1 | 0.65 | 0.44 | -0.46 | ||
107 | AT5G42060 | DEK, chromatin associated protein | -0.65 | 0.44 | -0.42 | |||
108 | AT3G58540 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06190.2); Has 6 Blast hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.46 | -0.44 | |||
109 | AT5G10220 | annexin 6 | annexin 6, ANNEXIN ARABIDOPSIS THALIANA 6 |
-0.65 | 0.43 | -0.44 | ||
110 | AT3G59220 | pirin | ATPIRIN1, pirin, PRN1 | -0.65 | 0.45 | -0.43 | ||
111 | AT3G51670 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
0.65 | 0.45 | -0.49 | |||
112 | AT3G12820 | myb domain protein 10 | myb domain protein 10, myb domain protein 10 |
-0.65 | 0.46 | -0.48 | ||
113 | AT2G20190 | CLIP-associated protein | CLIP-ASSOCIATED PROTEIN, CLIP-associated protein |
0.65 | 0.45 | -0.43 | ||
114 | AT3G07590 | Small nuclear ribonucleoprotein family protein | -0.65 | 0.43 | -0.42 | |||
115 | AT5G53400 | HSP20-like chaperones superfamily protein | BOBBER1 | -0.65 | 0.45 | -0.43 | ||
116 | AT4G16270 | Peroxidase superfamily protein | 0.65 | 0.44 | -0.47 | |||
117 | AT1G75180 | Erythronate-4-phosphate dehydrogenase family protein | -0.65 | 0.44 | -0.42 | |||
118 | AT2G44860 | Ribosomal protein L24e family protein | -0.65 | 0.45 | -0.44 | |||
119 | AT5G18360 | Disease resistance protein (TIR-NBS-LRR class) family | 0.65 | 0.42 | -0.45 | |||
120 | AT2G07230 | transposable element gene | 0.65 | 0.46 | -0.48 | |||
121 | AT1G62040 | Ubiquitin-like superfamily protein | autophagy 8c | 0.65 | 0.41 | -0.46 | ||
122 | AT5G49530 | SIN-like family protein | -0.65 | 0.44 | -0.43 | |||
123 | AT3G17770 | Dihydroxyacetone kinase | 0.65 | 0.46 | -0.46 | |||
124 | AT2G43280 | Far-red impaired responsive (FAR1) family protein | -0.65 | 0.45 | -0.47 | |||
125 | AT5G52770 | Copper transport protein family | -0.65 | 0.44 | -0.44 | |||
126 | AT2G18180 | Sec14p-like phosphatidylinositol transfer family protein | 0.65 | 0.49 | -0.49 | |||
127 | AT3G19740 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.65 | 0.44 | -0.45 | |||
128 | AT1G04790 | RING/U-box superfamily protein | -0.65 | 0.47 | -0.45 | |||
129 | AT3G56360 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.42 | -0.45 | |||
130 | AT1G12775 | Pentatricopeptide repeat (PPR) superfamily protein | -0.64 | 0.47 | -0.46 | |||
131 | AT5G55370 | MBOAT (membrane bound O-acyl transferase) family protein | -0.64 | 0.44 | -0.45 | |||
132 | AT1G69350 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.64 | 0.47 | -0.45 | |||
133 | AT4G35050 | Transducin family protein / WD-40 repeat family protein | MULTICOPY SUPPRESSOR OF IRA1 3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 |
-0.64 | 0.43 | -0.45 | ||
134 | AT5G04790 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.64 | 0.42 | -0.47 | |||
135 | AT1G27050 | homeobox protein 54 | -0.64 | 0.43 | -0.46 | |||
136 | AT1G08580 | unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.64 | 0.46 | -0.42 | |||
137 | AT2G37590 | DNA binding with one finger 2.4 | ATDOF2.4, DNA binding with one finger 2.4 |
0.64 | 0.46 | -0.42 | ||
138 | AT5G02390 | Protein of unknown function (DUF3741) | DUO1-activated unknown 1 | 0.64 | 0.46 | -0.45 | ||
139 | AT1G13690 | ATPase E1 | ATPase E1 | -0.64 | 0.44 | -0.46 | ||
140 | AT5G04280 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
AtRZ-1c, RZ-1c | -0.64 | 0.42 | -0.48 | ||
141 | AT1G79470 | Aldolase-type TIM barrel family protein | -0.64 | 0.47 | -0.44 | |||
142 | AT2G17680 | Arabidopsis protein of unknown function (DUF241) | 0.64 | 0.44 | -0.46 | |||
143 | AT1G71770 | poly(A)-binding protein 5 | poly(A)-binding protein 5 | -0.64 | 0.44 | -0.44 | ||
144 | AT1G11880 | transferases, transferring hexosyl groups | 0.64 | 0.43 | -0.45 | |||
145 | AT3G45430 | Concanavalin A-like lectin protein kinase family protein | 0.64 | 0.46 | -0.45 | |||
146 | AT2G21440 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.64 | 0.42 | -0.42 | |||
147 | AT5G22720 | F-box/RNI-like superfamily protein | 0.64 | 0.46 | -0.42 | |||
148 | AT4G36590 | MADS-box transcription factor family protein | 0.64 | 0.44 | -0.44 | |||
149 | AT4G16770 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.64 | 0.47 | -0.45 | |||
150 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | -0.64 | 0.45 | -0.41 | |||
151 | AT1G20520 | Arabidopsis protein of unknown function (DUF241) | 0.64 | 0.42 | -0.45 | |||
152 | AT3G04130 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.64 | 0.43 | -0.45 | |||
153 | AT5G62580 | ARM repeat superfamily protein | 0.64 | 0.49 | -0.48 | |||
154 | AT4G10730 | Protein kinase superfamily protein | 0.64 | 0.43 | -0.41 | |||
155 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.64 | 0.44 | -0.45 | |||
156 | AT3G52690 | RNI-like superfamily protein | -0.64 | 0.44 | -0.45 | |||
157 | AT4G32960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.64 | 0.45 | -0.45 | |||
158 | AT2G20770 | GCR2-like 2 | GCR2-like 2 | 0.64 | 0.45 | -0.42 | ||
159 | AT3G17790 | purple acid phosphatase 17 | ATACP5, ATPAP17, purple acid phosphatase 17 |
0.64 | 0.43 | -0.44 | ||
160 | AT5G59450 | GRAS family transcription factor | -0.64 | 0.43 | -0.4 | |||
161 | AT2G02880 | mucin-related | -0.64 | 0.42 | -0.45 | |||
162 | AT4G31880 | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink). |
-0.64 | 0.43 | -0.47 | |||
163 | AT1G51210 | UDP-Glycosyltransferase superfamily protein | 0.64 | 0.45 | -0.43 | |||
164 | AT1G19200 | Protein of unknown function (DUF581) | 0.63 | 0.44 | -0.43 | |||
165 | ATMG00890 | hypothetical protein | ORF106D | 0.63 | 0.46 | -0.43 | ||
166 | AT2G06005 | FRIGIDA interacting protein 1 | FRIGIDA interacting protein 1 | 0.63 | 0.47 | -0.43 | ||
167 | AT1G48050 | Ku80 family protein | ARABIDOPSIS THALIANA KU80 HOMOLOG, KU80 |
0.63 | 0.45 | -0.47 | ||
168 | AT3G13228 | RING/U-box superfamily protein | 0.63 | 0.45 | -0.46 | |||
169 | AT5G38350 | Disease resistance protein (NBS-LRR class) family | 0.63 | 0.44 | -0.45 | |||
170 | AT2G24220 | purine permease 5 | purine permease 5, purine permease 5 |
0.63 | 0.47 | -0.49 | ||
171 | AT3G23640 | heteroglycan glucosidase 1 | heteroglycan glucosidase 1 | 0.63 | 0.45 | -0.44 | ||
172 | AT1G42460 | transposable element gene | 0.63 | 0.45 | -0.46 | |||
173 | AT2G35950 | embryo sac development arrest 12 | embryo sac development arrest 12 | 0.63 | 0.46 | -0.41 | ||
174 | AT3G18650 | AGAMOUS-like 103 | AGAMOUS-like 103 | 0.63 | 0.43 | -0.44 | ||
175 | AT1G45160 | Protein kinase superfamily protein | 0.63 | 0.44 | -0.46 | |||
176 | AT1G54230 | Winged helix-turn-helix transcription repressor DNA-binding | 0.63 | 0.45 | -0.43 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
177 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
1 | 0.44 | -0.44 | ||
178 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.86 | 0.43 | -0.45 | ||
179 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | 0.82 | 0.46 | -0.46 | ||
180 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.81 | 0.45 | -0.44 | ||
181 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 0.8 | 0.44 | -0.44 | ||
182 | C0142 | Malonic acid | - | Malonate | fatty acid biosynthesis (plant mitochondria) | 0.79 | 0.45 | -0.43 | ||
183 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | 0.78 | 0.46 | -0.43 | ||
184 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
0.77 | 0.45 | -0.45 | ||
185 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.77 | 0.45 | -0.45 | ||
186 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | 0.76 | 0.44 | -0.47 | ||
187 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.74 | 0.45 | -0.46 | ||
188 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.72 | 0.45 | -0.45 | ||
189 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | 0.72 | 0.43 | -0.43 | ||
190 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.71 | 0.41 | -0.41 | ||
191 | C0114 | Homocystine | L-Homocystine | - | - | 0.71 | 0.42 | -0.42 | ||
192 | C0060 | Asparagine | D,L-Asparagine | L-Asparagine | asparagine degradation I, asparagine biosynthesis III (tRNA-dependent), asparagine biosynthesis I, tRNA charging, cyanide detoxification II |
0.71 | 0.41 | -0.43 | ||
193 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | 0.71 | 0.41 | -0.45 | ||
194 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
0.7 | 0.43 | -0.43 | ||
195 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
0.67 | 0.48 | -0.42 | ||
196 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
0.67 | 0.44 | -0.46 | ||
197 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.67 | 0.45 | -0.45 | ||
198 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.66 | 0.44 | -0.44 | ||
199 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.66 | 0.41 | -0.44 | ||
200 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.65 | 0.45 | -0.43 | ||
201 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
0.65 | 0.46 | -0.43 | ||
202 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
0.64 | 0.41 | -0.45 | ||
203 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
0.63 | 0.41 | -0.47 | ||
204 | C0062 | Betain | - | - | - | 0.63 | 0.46 | -0.44 | ||
205 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
0.63 | 0.45 | -0.43 |