4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on hy5 high light
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "hy5 high light"
Download transcriptome of top 30
Score
Experiment
Correlation from
hy5 high light
Correlation to
hy5 high light
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
hy5 high light
1.00
>More info
1.00
>More info
Col-O high light
Original data
GEO bulk
2
Mutant hy5 (High Light)
1.00
>More info
1.00
>More info
Col-0 (High Light)
Original data
GEO bulk
3
hy5 low light
0.86
>More info
0.86
>More info
Col-O low light
Original data
GEO bulk
4
Mutant hy5
0.86
>More info
0.86
>More info
Col-0
Original data
GEO bulk
5
Atwrky40 high light
0.61
>More info
0.46
>More info
Col0 high light
high light for 1h at 1000 μE m-2s-1
leaf
Original data
GEO bulk
6
Red/FR Light 4 h
0.39
>More info
0.64
>More info
FarRed Light 4 h
Original data
Light treatments
7
FarRed Light 4 h
-0.28
>More info
-0.68
>More info
White Light 4 h
Original data
Light treatments
8
Mutant cry1 (High Light)
0.39
>More info
0.57
>More info
Col-0 (High Light)
Original data
GEO bulk
9
cry1 high light
0.39
>More info
0.57
>More info
Col-O high light
Original data
GEO bulk
10
Red Light 4 h
0.31
>More info
0.62
>More info
White Light 4 h
Original data
Light treatments
11
csn5 (csn5a-2 csn5b) dark
-0.50
>More info
-0.40
>More info
WT dark
Original data
GEO bulk
12
Laer pretreat GA Flg22 1h
0.19
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
13
WT light
-0.50
>More info
-0.36
>More info
WT dark
Original data
GEO bulk
14
root - 04% oxygen - 2h
-0.21
>More info
-0.64
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
15
Atwrky40
0.51
>More info
0.33
>More info
Col0
none
leaf
Original data
GEO bulk
16
atmyc2 cop1 Seedling BL
-0.34
>More info
-0.50
>More info
WT Seedling BL
Original data
GEO bulk
17
35S:RPS4 eds1-2 T0
0.04
>More info
0.77
>More info
35S:RPS4 T0
leaves
Original data
18
Leafminer damaged seedlings
0.23
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
19
2hr transitory KNO3 PrR cell
0.08
>More info
0.71
>More info
2hr KCl control PrR cell
Protoplasted root cells
Original data
GEO bulk
20
ALC Toc1 light-light Mock
-0.53
>More info
-0.25
>More info
Col light-light Mock
no ethanol
Original data
GEO bulk
21
Blue Light 4 h
-0.20
>More info
-0.58
>More info
White Light 4 h
Original data
Light treatments
22
IAA7mII over-expressor IAA Treated
0.08
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
23
Col0-PsmES4326-24hpi
0.15
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
24
Col BTH
0.07
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
25
cat2-2; 8h switch to ambient CO2 concentrations;
0.10
>More info
0.64
>More info
WT; 8h switch to ambient CO2 concentrations;
2 whole rosettes
Original data
26
root - 04% oxygen - 30min
-0.19
>More info
-0.53
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
27
12h volatiles Sm. R3089
0.07
>More info
0.64
>More info
12h untreated
whole seedling
Original data
GEO bulk
28
Brz220 3 h
0.52
>More info
0.18
>More info
Mock 3 h
Original data
Effect of brassinosteroid inhibitors on seedlings
29
TNT-seedlings
0.17
>More info
0.51
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
30
Heat shock optimum
0.03
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
31
root - 01% oxygen - 30min
-0.15
>More info
-0.50
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
32
siliques AtHb1 control
0.12
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
33
Brassinolide 0.5 h (det2)
-0.10
>More info
-0.53
>More info
Mock 0.5 h (det2)
Original data
Basic hormone treatment of seedlings
34
long 14-degree-
-0.02
>More info
-0.61
>More info
control long
Original data
GEO bulk
35
Ibuprofen 3 h
0.02
>More info
0.60
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
36
Col0 roots 2hr KNO3 nitrogen
0.03
>More info
0.59
>More info
Col0 roots 2hr KCl control
root
Original data
GEO bulk
37
CCA1-ox 6am non-polysomal
0.11
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
38
Methyl Jasmonate 3 h
-0.10
>More info
-0.51
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
39
SA 4mM
0.11
>More info
0.50
>More info
untreated
4 weeks old at time of treatment
whole leaf
Original data
GEO bulk
40
GO5; 8h switch to ambient CO2 concentrations;
0.10
>More info
0.50
>More info
WT; 8h switch to ambient CO2 concentrations;
2 whole rosettes
Original data
41
20h Col-0
-0.07
>More info
-0.52
>More info
00h Col-0
Original data
GEO bulk
42
seedling -S Exp
-0.05
>More info
-0.52
>More info
seedling FN Exp
seedling
Original data
43
gpa1-4/agb1-2 clean-air 3h
-0.02
>More info
0.55
>More info
Col clean-air 3h
clean-air
Original data
GEO bulk
44
xyl-grown cell culture- 1h 1mM Fru
0.06
>More info
-0.59
>More info
xyl-grown cell culture- 1h 1mM Xyl
cell culture
Original data
45
Root wt CLE10
0.02
>More info
-0.50
>More info
Root wt CLE25
root tip
Original data
GEO bulk
46
penta MeJA 1h
0.06
>More info
-0.53
>More info
Laer MeJA 1h
leaf discs
Original data
GEO bulk
47
seed germinating in countinuous light 24h SL
-0.20
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
48
root - 08% oxygen - 2h
0.03
>More info
-0.50
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
49
Ba1 UV
0.21
>More info
-0.63
>More info
Ba1 mock
UV
seedling
Original data
50
-Sulfate 24 h
0.10
>More info
-0.51
>More info
Mock 24 h (1500uM sulfate)
Original data
Response to sulfate limitation
51
Shoot apex inflorescence (after bolting)
-0.24
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
52
bri1-116
-0.32
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
53
MPK6 ox Shoot Hypoxia
0.12
>More info
-0.51
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
54
35S:RPS4 rrs1-11 2h
0.23
>More info
-0.50
>More info
35S:RPS4 2h
leaves
Original data