4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on FarRed Light 4 h
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List of experiments correlated with "FarRed Light 4 h "  Help Download transcriptome of top 30
Score Experiment Correlation from
FarRed Light 4 h 		Correlation to
FarRed Light 4 h 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 FarRed Light 4 h 1.00 >More info 1.00 >More info White Light 4 h Original data Light treatments
2 Blue Light 4 h 0.92 >More info 0.95 >More info White Light 4 h Original data Light treatments
3 Red/FR Light 4 h -0.93 >More info -0.93 >More info FarRed Light 4 h Original data Light treatments
4 2d dark-grown WT(Col-0)/1 hr red light 0.80 >More info 0.73 >More info 2d dark-grown WT seedling Original data GEO bulk
5 FarRed Light 45min -0.65 >More info -0.87 >More info White Light 45min Original data Light treatments
6 Light 4h steady-state 0.84 >More info 0.67 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
7 Light 0.5h polysome-bound 0.74 >More info 0.75 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
8 Dark 40 min pls UV-A 5 min 0.76 >More info 0.73 >More info Dark 45 min Original data Light treatments
9 Light 4h polysome-bound 0.84 >More info 0.64 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
10 Dark 40min pls UV-AB 5min 0.73 >More info 0.71 >More info Dark 45 min Original data Light treatments
11 WT Red light 1h 0.73 >More info 0.69 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
12 60m light 0.74 >More info 0.68 >More info before light whole seedlings Original data GEO bulk
13 Red Light 45min -0.67 >More info -0.74 >More info White Light 45min Original data Light treatments
14 30m light 0.71 >More info 0.68 >More info before light whole seedlings Original data GEO bulk
15 Dark 44min pls RedLigh 1min 0.73 >More info 0.65 >More info Dark 45 min Original data Light treatments
16 Night Time Treatment 0.72 >More info 0.65 >More info Night Time Control 1hr white light pulse aerial rosette Original data
17 bri1-116 0.64 >More info 0.73 >More info Col seedling Original data GEO bulk
18 short 12-degree- 0.63 >More info 0.73 >More info control short Original data GEO bulk
19 seedling 24h after Gamma WT 0.79 >More info 0.56 >More info seedling day 2 unirradiated WT 24h Original data
20 Light 0.5h steady-state 0.67 >More info 0.66 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
21 Red Light 4 h -0.60 >More info -0.72 >More info White Light 4 h Original data Light treatments
22 Mutant cry1 (High Light) -0.68 >More info -0.61 >More info Col-0 (High Light) Original data GEO bulk
23 IAA 1 h -0.64 >More info -0.65 >More info Mock 1 h Original data Basic hormone treatment of seedlings
24 seedling 24h after Gamma atm-1 0.73 >More info 0.56 >More info seedling day 2 unirradiated atm-1 24h Original data
25 Dark 4 h pls UV-AB 5min 0.65 >More info 0.64 >More info Dark 4 h Original data Light treatments
26 cry1 high light -0.68 >More info -0.61 >More info Col-O high light Original data GEO bulk
27 Col-0 WT HL 3h 0.78 >More info 0.49 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
28 24h volatiles Sm. R3089 -0.67 >More info -0.60 >More info 24h untreated whole seedling Original data GEO bulk
29 long 10-degree- 0.67 >More info 0.58 >More info control long Original data GEO bulk
30 long 12-degree- 0.62 >More info 0.62 >More info control long Original data GEO bulk
31 camta1-2 -0.75 >More info -0.49 >More info Col-0-WT Original data GEO bulk
32 etiolated cop1BBX22-GFPox 0.76 >More info 0.47 >More info etiolated Col-0 whole seedlings Original data GEO bulk
33 csn3-1 dark 0.80 >More info 0.43 >More info WT dark Original data GEO bulk
34 sav3-2 shade 0.67 >More info 0.55 >More info Col-0 shade seedlings Original data GEO bulk
35 Mutant sav3-2 (SH) 0.67 >More info 0.55 >More info Col-0 (SH) Original data GEO bulk
36 csn5 (csn5a-2 csn5b) dark 0.79 >More info 0.43 >More info WT dark Original data GEO bulk
37 Day Time Treatment 0.67 >More info 0.54 >More info Day Time Control 1hr white light pulse aerial rosette Original data
38 long 14-degree- 0.57 >More info 0.64 >More info control long Original data GEO bulk
39 csn4-1 mutant 0.81 >More info 0.39 >More info WT dark Original data GEO bulk
40 WT Red light 18h 0.73 >More info 0.47 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
41 des1 water 0.71 >More info 0.49 >More info WT water water leaf Original data GEO bulk
42 WT NAA 2h -0.59 >More info -0.61 >More info WT 0h Leaf tissue Original data GEO bulk
43 35S:LOB-GR DEX 0.69 >More info 0.50 >More info Col DEX dexamethasone seedling Original data GEO bulk
44 ARR22-ox 0.71 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
45 short 17-degree- 0.57 >More info 0.62 >More info control short Original data GEO bulk
46 cop1 Seedling BL+ABA 0.71 >More info 0.47 >More info WT Seedling BL+ABA Original data GEO bulk
47 shl-2 Pool -0.59 >More info -0.59 >More info Ler Pool seedling Original data GEO bulk
48 Uniconazole 3 h 0.75 >More info 0.42 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
49 pip3 At2g19270 RNAi 32 0.66 >More info 0.50 >More info Nd-1 whole plant Original data GEO bulk
50 csn3-1 light 0.78 >More info 0.38 >More info WT light Original data GEO bulk
51 toc1-1-85hr 0.62 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
52 WT Na2S 0.69 >More info 0.47 >More info WT water Na2S leaf Original data GEO bulk
53 long 8-degree- 0.62 >More info 0.53 >More info control long Original data GEO bulk
54 WT cold 0.66 >More info 0.49 >More info WT control All aerial tissue Original data GEO bulk
55 lht1 untreated 0.73 >More info 0.42 >More info WT untreated untreated leaf Original data GEO bulk
56 csn5 (csn5a-2 csn5b) light 0.76 >More info 0.39 >More info WT light Original data GEO bulk
57 GR-bdl DEX IAA 0.60 >More info 0.54 >More info GR-bdl IAA Original data GEO bulk
58 Dry late day 0.67 >More info 0.46 >More info Wet late day water-limited whole rosette Original data GEO bulk
59 petiole in FRD -0.73 >More info -0.40 >More info petiole in WL petioles Original data GEO bulk
60 pip3 At2g19270 RNAi 24 0.59 >More info 0.52 >More info Nd-1 whole plant Original data GEO bulk
61 long 17-degree- 0.57 >More info 0.54 >More info control long Original data GEO bulk
62 penta mutant (higher order mutant) -0.62 >More info -0.48 >More info col control (higher order mutant) Original data GEO bulk
63 WT hypoxia -0.68 >More info -0.40 >More info WT normoxia whole rosette Original data
64 MIL4 ox -0.72 >More info -0.36 >More info Col Original data GEO bulk
65 nas4x leaves + Fe -0.62 >More info -0.46 >More info WT leaves + Fe Leaves Original data GEO bulk
66 PBZ 0.44 >More info 0.64 >More info none PBZ Rosette Original data GEO bulk
67 Mutant axr3-1 0.64 >More info 0.43 >More info Col Original data GEO bulk
68 Shoot -Cs 0.51 >More info 0.55 >More info Control-shoot Original data GEO bulk
69 camta1/2 warm -0.63 >More info -0.43 >More info WT 24h cold entire aerial part Original data GEO bulk
70 phyB Dark 0.65 >More info 0.41 >More info WT(Ler) Dark Original data GEO bulk
71 csn4-1 dark 0.72 >More info 0.34 >More info WT light Original data GEO bulk
72 mutant acs6E (single mutant) 0.60 >More info 0.45 >More info col control (single mutant) Original data GEO bulk
73 IRP1-OE-Ctrl--shoot 0.65 >More info 0.40 >More info COL-0-Ctrl--shoot shoot Original data
74 atmyc2 cop1 Seedling BL 0.64 >More info 0.41 >More info WT Seedling BL Original data GEO bulk
75 Shoot dark control 7h -0.63 >More info -0.41 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
76 Col-0 DEX Shade -0.70 >More info -0.34 >More info Col-0 DEX WL seedlings Original data
77 tcp14 -0.51 >More info -0.53 >More info WT inflorescences Original data GEO bulk
78 WT(Ler) Rc50 0.66 >More info 0.38 >More info WT(Ler) Dark Original data GEO bulk
79 WT 24h cold 0.59 >More info 0.44 >More info WT warm 24h cold entire aerial part Original data GEO bulk
80 Col-O low light -0.56 >More info -0.47 >More info Col-O bule light Original data GEO bulk
81 IAA 0.5 h -0.55 >More info -0.48 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
82 Propiconazole 3 h 0.72 >More info 0.31 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
83 sfr3 control 0.65 >More info 0.38 >More info WT control All aerial tissue Original data GEO bulk
84 Fenclorim 24hr 0.63 >More info 0.39 >More info Acetone 24hr root Original data GEO bulk
85 seedling 1.5h after Gamma atm-1 0.50 >More info 0.52 >More info seedling day 1 unirradiated atm-1 1.5h Original data
86 35SpBVR3 -0.61 >More info -0.41 >More info WT Original data GEO bulk
87 phyAphyB Dark -0.62 >More info -0.40 >More info phyB Dark Original data GEO bulk
88 short 10-degree- 0.56 >More info 0.45 >More info control short Original data GEO bulk
89 upf1 0.57 >More info 0.44 >More info WT whole plant Original data GEO bulk
90 hy5 low light -0.75 >More info -0.26 >More info Col-O low light Original data GEO bulk
91 sid2-2 24hpi A. brassicicola 0.62 >More info 0.39 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
92 Ibuprofen 3 h 0.58 >More info 0.43 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
93 Mutant hy5 -0.75 >More info -0.26 >More info Col-0 Original data GEO bulk
94 lht1 PstDC3000 48h 0.70 >More info 0.31 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
95 WT 90-105 min Xanthomonas 0.65 >More info 0.36 >More info WT T0 Original data GEO bulk
96 Col-0 shade -0.61 >More info -0.40 >More info Col-0 light seedlings Original data GEO bulk
97 NJ15 0.49 >More info 0.52 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
98 Mature callus 0.61 >More info 0.39 >More info Young callus hypocotyls Original data GEO bulk
99 Fenclorim 4hr 0.57 >More info 0.43 >More info Acetone 4hr root Original data GEO bulk
100 WT Rc50 0.65 >More info 0.35 >More info WT Dark red light whole seedling Original data GEO bulk
101 B.cinerea 18 h infection 0.37 >More info 0.63 >More info Mock 18 h Original data Botrytis cinerea infection
102 Whole root - S 3H 0.45 >More info 0.55 >More info Whole root - S 0H Original data GEO bulk
103 Botrytis cinerea 18h 0.37 >More info 0.63 >More info control 18h Original data GEO bulk
104 rosettes drought 0.55 >More info 0.44 >More info rosettes watered Original data GEO bulk
105 rpoTmp(line) MLD stressed 0.60 >More info 0.39 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
106 rGRF3x35S:GIF -0.66 >More info -0.33 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
107 cop1 Seedling BL 0.63 >More info 0.36 >More info WT Seedling BL Original data GEO bulk
108 hepta mutant (higher order mutant) -0.61 >More info -0.38 >More info col control (higher order mutant) Original data GEO bulk
109 IAA Treated -0.42 >More info -0.57 >More info Negative Control Original data GEO bulk
110 Brassinolide 3 h (det2) -0.56 >More info -0.42 >More info Mock 3 h (det2) Original data Basic hormone treatment of seedlings
111 PIF5ox low R/FR 0.67 >More info 0.31 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
112 Atss3 Light1 0.53 >More info 0.45 >More info Atss3 Dark0.5 Original data GEO bulk
113 phyABDE Rc50 0.61 >More info 0.37 >More info phyABDE Dark red light whole seedling Original data GEO bulk
114 ein2-1 24hpi A. brassicicola 0.63 >More info 0.35 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
115 aerial organ callus inducing medium 12 h -0.60 >More info -0.37 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
116 WT cold 24h 0.52 >More info 0.45 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
117 essp4/sdg8-5 mutant 0.66 >More info 0.31 >More info wild type leaf Original data GEO bulk
118 dde2-2 24hpi A. brassicicola 0.52 >More info 0.45 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
119 WT Seedling BL 0.50 >More info 0.47 >More info WT Seedling Dark Original data GEO bulk
120 35S:LOB-GR mock 0.59 >More info 0.38 >More info Col mock mock seedling Original data GEO bulk
121 piffq 2d WL 0.64 >More info 0.33 >More info WT 2d WL whole seedling Original data GEO bulk
122 UV 0.63 >More info 0.34 >More info WT aerial region Original data GEO bulk
123 ga1-3 SCL3OE 0.58 >More info 0.39 >More info ga1-3 whole root Original data
124 Mutant hy5 (High Light) -0.68 >More info -0.28 >More info Col-0 (High Light) Original data GEO bulk
125 hy5 high light -0.68 >More info -0.28 >More info Col-O high light Original data GEO bulk
126 Shoot dark control 24h -0.62 >More info -0.34 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
127 CCA14 dark late -0.65 >More info -0.31 >More info Col dark late Original data GEO bulk
128 Ws-2 high light 0.61 >More info 0.35 >More info Ws-2 low light Original data GEO bulk
129 35S::KLU 0.52 >More info 0.44 >More info WT Shoot Original data
130 2d red light grown pif1pif3pif4pif5 (pifq) mutant 0.52 >More info 0.44 >More info 2d red light grown WT(Col-0) seedlings Original data GEO bulk
131 mutant acs9B (single mutant) -0.61 >More info -0.34 >More info col control (single mutant) Original data GEO bulk
132 low R/FR JA spray -0.62 >More info -0.33 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
133 det2 light-dark -0.61 >More info -0.34 >More info det2 light light-dark Original data GEO bulk
134 WT-Dry 0.65 >More info 0.30 >More info WT-CK dehydration treatment 1h Original data
135 C58 3hpi -0.76 >More info -0.19 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
136 GV3101 3hpi -0.66 >More info -0.28 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
137 camta1 leaf water -0.55 >More info -0.39 >More info Col-0 leaf water leaf Original data GEO bulk
138 seedling SPL13 -0.63 >More info -0.31 >More info seedling Col-0 Original data GEO bulk
139 abi4-102 -lincomycin -0.64 >More info -0.30 >More info Col-0 -lincomycin Original data GEO bulk
140 toc1-1-89hr 0.51 >More info 0.43 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
141 mp-B4149 mutant IAA 0.69 >More info 0.25 >More info GR-bdl IAA Original data GEO bulk
142 oas-a1.1 root 0.31 >More info 0.63 >More info WT-Untreated Root Original data GEO bulk
143 Bay-0-1h IAA -0.56 >More info -0.37 >More info Bay-0-0h IAA whole plant Original data GEO bulk
144 low water potential 0.54 >More info 0.39 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
145 sicy-192 gun1-101 cotyledons 0.65 >More info 0.28 >More info WT cotyledons cotyledons Original data
146 Paclobutrazol 3 h 0.57 >More info 0.36 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
147 mil4 sid2 -0.55 >More info -0.37 >More info Col rosettes Original data GEO bulk
148 12h volatiles Sm. R3089 -0.52 >More info -0.40 >More info 12h untreated whole seedling Original data GEO bulk
149 nia1nia2noa1-2 0.55 >More info 0.37 >More info Col-0 whole seedlings Original data GEO bulk
150 Phytoprostane A1 4 h 0.50 >More info 0.42 >More info Col-0 Original data GEO bulk
151 3x(p) -0.57 >More info -0.35 >More info 2x two week old seedlings Original data
152 Col whole leaf 3dpi 0.42 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
153 short 8-degree- 0.52 >More info 0.39 >More info control short Original data GEO bulk
154 downy mildew cotyledons early stage 0.67 >More info 0.24 >More info mock inoculated Cotyledons Original data GEO bulk
155 aox1a(line) MLD stressed 0.54 >More info 0.37 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
156 Mutant nph4-1_arf19-1 (IAA) 0.58 >More info 0.33 >More info Col (IAA) Original data GEO bulk
157 inhibitor A Treated 0.57 >More info 0.34 >More info Negative Control Original data GEO bulk
158 sav3-2 light 0.62 >More info 0.29 >More info Col-0 light seedlings Original data GEO bulk
159 mutant acs2B (single mutant) 0.60 >More info 0.31 >More info col control (single mutant) Original data GEO bulk
160 Mutant sav3-2 (WL) 0.62 >More info 0.29 >More info Col-0 (WL) Original data GEO bulk
161 sdg8-2 mutant 0.62 >More info 0.29 >More info wild type leaf Original data GEO bulk
162 piffq 3d WL 0.64 >More info 0.26 >More info WT 3d WL whole seedling Original data GEO bulk
163 ubc13A -Fe -0.50 >More info -0.40 >More info Col -Fe root Original data GEO bulk
164 shoot control p35S -0.35 >More info -0.55 >More info shoot control total Original data GEO bulk
165 root longitudinal zone-4 low sulfur -0.58 >More info -0.32 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
166 Heat no recovery 0.55 >More info 0.34 >More info Mock no recovery seedling Original data GEO bulk
167 MYB12OX/tt4 -0.56 >More info -0.33 >More info Col-0 aerial part Original data
168 essp3/brm5 mutant 0.61 >More info 0.28 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
169 4x -0.51 >More info -0.38 >More info 2x two week old seedlings Original data
170 seedling 1.5h after Gamma WT 0.64 >More info 0.25 >More info seedling day 1 unirradiated WT 1.5h Original data
171 IAA 3 h -0.54 >More info -0.35 >More info Mock 3 h Original data Basic hormone treatment of seedlings
172 Shoot submergence 24h -0.55 >More info -0.33 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
173 Laer Alternaria 3dpi -0.62 >More info -0.26 >More info Laer Control leaf discs Original data GEO bulk
174 ahg2-1sid2-2 0.62 >More info 0.26 >More info WT (Col) control Original data GEO bulk
175 ABA 1 h 0.37 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
176 seed germinating in countinuous light 24h SL 0.21 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
177 miR mutant (higher order mutant) -0.59 >More info -0.29 >More info col control (higher order mutant) Original data GEO bulk
178 WT leaf-drought 0.53 >More info 0.34 >More info WT leaf-well watered Original data GEO bulk
179 CMP 4hr 0.54 >More info 0.33 >More info Acetone 4hr root Original data GEO bulk
180 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.53 >More info 0.34 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
181 axr2-BR 0.66 >More info 0.21 >More info BR BR dark-grown seedlings Original data GEO bulk
182 Col leaves 48h LT 0.57 >More info 0.30 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
183 Anoxia 0.57 >More info 0.30 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
184 root columella root cap -S -0.52 >More info -0.34 >More info root columella root cap pH5.7 Original data GEO bulk
185 col 24h4c set4 0.54 >More info 0.32 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
186 WT NAA 1h -0.32 >More info -0.54 >More info WT 0h Leaf tissue Original data GEO bulk
187 root endodermis and quiescent center 40 mM NaCl 0.33 >More info 0.53 >More info root endodermis and quiescent center Original data GEO bulk
188 Bay-0-30min IAA -0.59 >More info -0.27 >More info Bay-0-0h IAA whole plant Original data GEO bulk
189 Mutant lfy-12(shoot apex) 0.50 >More info 0.36 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
190 35S::CBF2 0.50 >More info 0.36 >More info Ws2 Original data GEO bulk
191 Mutant nph4-1_arf19-1 0.55 >More info 0.30 >More info Col Original data GEO bulk
192 Bay-0-3h IAA -0.62 >More info -0.23 >More info Bay-0-0h IAA whole plant Original data GEO bulk
193 CabpBVR2 -0.50 >More info -0.35 >More info WT Original data GEO bulk
194 short 14-degree- 0.58 >More info 0.27 >More info control short Original data GEO bulk
195 npr1 -0.25 >More info -0.60 >More info WT(COL) Original data GEO bulk
196 arr10 arr12 0.53 >More info 0.31 >More info WT Original data GEO bulk
197 TaFLS overexpression line (OE2) -0.53 >More info -0.31 >More info Col-0 Rosette leaves Original data
198 pnp1-1 3h -P 0.50 >More info 0.34 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
199 erf104-ko H2O 4h 0.55 >More info 0.29 >More info Col-0 H2O 4h Original data GEO bulk
200 cca1-lhy 30m light -0.60 >More info -0.24 >More info 30m light whole seedlings Original data GEO bulk
201 WT(Ler) Rc15 0.56 >More info 0.27 >More info WT(Ler) Dark Original data GEO bulk
202 3x(m) -0.52 >More info -0.31 >More info 2x two week old seedlings Original data
203 eto1-4 + AVG -0.55 >More info -0.28 >More info eto1-4 whole seedling Original data GEO bulk
204 WT resupplied Pi 4h 0.54 >More info 0.29 >More info WT complete seedlings Original data
205 shoots bhlh100/101 100uM Fe 0.27 >More info 0.56 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
206 piffq FR 1h 0.58 >More info 0.25 >More info WT FR 1h whole seedling Original data GEO bulk
207 msh1 stunt 0.53 >More info 0.29 >More info WT Col-0 above ground part of plant Original data GEO bulk
208 low R/FR mock spray -0.53 >More info -0.29 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
209 Tsu -Fe 48h Shoots 0.52 >More info 0.30 >More info Tsu +Fe 24h Shoots Original data GEO bulk
210 Dry midnight 0.52 >More info 0.29 >More info Wet midnight water-limited whole rosette Original data GEO bulk
211 WT 24H Cold 0.54 >More info 0.27 >More info WT control Original data GEO bulk
212 Laer Pst DC3000 12hpi -0.62 >More info -0.19 >More info Laer Control leaf discs Original data GEO bulk
213 swn-7 -0.50 >More info -0.31 >More info Col whole plant Original data GEO bulk
214 Shoot apex inflorescence (after bolting) 0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
215 MG132 3 h 0.58 >More info 0.23 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
216 WT cold 12 h 0.58 >More info 0.23 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
217 WT chitooctaose 0.60 >More info 0.21 >More info WT water Original data GEO bulk
218 9 hr Hypoxia IP RNA 0.55 >More info 0.24 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
219 hexa mutant (higher order mutant) -0.64 >More info -0.15 >More info col control (higher order mutant) Original data GEO bulk
220 Col-0 DCA 6d -0.64 >More info -0.15 >More info Col-0 MOCK 6d Original data GEO bulk
221 Col-0 Mock Shade -0.54 >More info -0.25 >More info Col-0 Mock WL seedlings Original data
222 COL-0-Fe--shoot 0.53 >More info 0.26 >More info COL-0-Ctrl--shoot shoot Original data
223 aba2 1% sucrose 12-day-old -0.57 >More info -0.22 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
224 AtLysM RLK1 mutant water 0.56 >More info 0.22 >More info WT water Original data GEO bulk
225 pXVE:HA-EDM2-a untreated -0.50 >More info -0.28 >More info Col-0 untreated seedlings Original data GEO bulk
226 rGRF -0.58 >More info -0.20 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
227 Col0-PsmES4326-24hpi 0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
228 35S:GIF -0.69 >More info -0.09 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
229 Mutant iaa5_6_19 0.57 >More info 0.21 >More info Col Original data GEO bulk
230 ws 24h4c q8ws 0.50 >More info 0.27 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
231 current injection 0.52 >More info 0.25 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
232 PNO8 3 h 0.56 >More info 0.20 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
233 ASL9-ox -0.51 >More info -0.25 >More info WT aerial parts of seedlings Original data GEO bulk
234 6h volatiles Sp. HRO-C48 -0.53 >More info -0.22 >More info 6h untreated whole seedling Original data GEO bulk
235 RRE1 Chitin 0.50 >More info 0.25 >More info Chitin Original data GEO bulk
236 4C 0h 0.52 >More info 0.23 >More info 22C 0h Original data GEO bulk
237 shoots WT 0uM Fe 0.53 >More info 0.22 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
238 upf3 0.51 >More info 0.24 >More info WT whole plant Original data GEO bulk
239 C24-30min IAA -0.55 >More info -0.20 >More info C24-0h IAA whole plant Original data GEO bulk
240 Leaf wounded 0.51 >More info 0.24 >More info Leaf control vegetative leaf Original data GEO bulk
241 toc1-1-81hr 0.54 >More info 0.21 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
242 sid2-2 mock 0.56 >More info 0.18 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
243 auxin and brassinazole seedlings 0.53 >More info 0.21 >More info auxin seedlings Original data GEO bulk
244 sid2-2 safener 0.50 >More info 0.23 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
245 Dark 6h hml -0.55 >More info -0.18 >More info 0h hml Original data
246 Whole root - low pH 48H -0.06 >More info -0.67 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
247 rli 0.55 >More info 0.17 >More info WT whole plant Original data GEO bulk
248 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.65 >More info 0.07 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
249 Propiconazole 12 h 0.50 >More info 0.22 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
250 wnk8-3 untreated -0.52 >More info -0.20 >More info Col-0 untreated seedlings Original data GEO bulk
251 35S::ERF104 H2O 4h 0.54 >More info 0.18 >More info Col-0 H2O 4h Original data GEO bulk
252 gun1gun5 Norflurazon 0.55 >More info 0.16 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
253 C24-1h IAA -0.54 >More info -0.17 >More info C24-0h IAA whole plant Original data GEO bulk
254 shoot hypoxia total 0.50 >More info 0.21 >More info shoot control total Original data GEO bulk
255 CMP 24hr 0.53 >More info 0.18 >More info Acetone 24hr root Original data GEO bulk
256 Dark 6h wt -0.53 >More info -0.18 >More info 0h wt Original data
257 Col-0 DCA 48h 0.55 >More info 0.15 >More info Col-0 MOCK 48h Original data GEO bulk
258 leaf blade in FRD -0.54 >More info -0.16 >More info leaf blade in WL leaf blades Original data GEO bulk
259 Glyphosate EC50 0.52 >More info 0.18 >More info Carrier (Glyphosate) Original data GEO bulk
260 NaCl Col 0.16 >More info 0.53 >More info Col Original data GEO bulk
261 piffq FR 24h -0.52 >More info -0.16 >More info WT FR 24h whole seedling Original data GEO bulk
262 WT Shoot-Pi 0.53 >More info 0.15 >More info WT Shoot+Pi shoots Original data GEO bulk
263 etiolated cop1 0.64 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
264 Naphthyl- phthalamic acid 3 h 0.58 >More info 0.10 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
265 edm2-2 untreated -0.51 >More info -0.16 >More info Col-0 untreated seedlings Original data GEO bulk
266 DUO1 induced 24h 0.52 >More info 0.14 >More info 24hr-not-induced whole plant Original data GEO bulk
267 A. halleri -0.52 >More info -0.14 >More info A. thaliana mature leaves before flowering Original data GEO bulk
268 E.orontii Infection 3 day -0.61 >More info -0.04 >More info Uninfection 3 day Original data Elicitor treatments
269 A. thaliana-A. halleri hybrid -0.54 >More info -0.11 >More info A. thaliana mature leaves before flowering Original data GEO bulk
270 Col leaves 120h LT 0.53 >More info 0.11 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
271 siliques AtHb1 control 0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
272 arp6-10 24h at 27 ºC 0.50 >More info 0.13 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
273 Apex mir-3TCP 14DAS 0.54 >More info 0.09 >More info Apex Col 14DAS Original data GEO bulk
274 Mock pft1 leaf 0.55 >More info 0.08 >More info Mock Col-0 leaf water leaf Original data GEO bulk
275 an3-4 leaf primordia -0.52 >More info -0.09 >More info WT leaf primordia Original data GEO bulk
276 npr1 sni1 SA -0.50 >More info -0.11 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
277 Apex mir-319b 17DAS 0.61 >More info 0.00 >More info Apex Col 14DAS Original data GEO bulk
278 WT zebularine 5d 0.58 >More info 0.02 >More info WT mock 5d shoot apical meristem Original data
279 WT roots - Fe -0.08 >More info -0.52 >More info WT roots + Fe Roots Original data GEO bulk
280 axr2 0.50 >More info 0.09 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
281 exo70A1 -0.50 >More info -0.09 >More info Col-0 whole plant Original data GEO bulk
282 ahg2-1 0.50 >More info 0.09 >More info WT (Col) control Original data GEO bulk
283 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
284 Col-0 INA 6d -0.56 >More info -0.02 >More info Col-0 MOCK 6d Original data GEO bulk
285 pif4pif5 mut 24h FR 0.51 >More info 0.05 >More info WT 24h FR Original data GEO bulk
286 35S::PI ap3-3 35S::AP-GR +DEX -0.07 >More info 0.63 >More info 0hr DEX Original data GEO bulk
287 nrpe1 -0.54 >More info -0.01 >More info WT Original data
288 WT Shoot Hypoxia 0.52 >More info 0.03 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
289 sta1 0.51 >More info 0.03 >More info WT Original data GEO bulk
290 coi1 0.57 >More info -0.03 >More info Col-0 Leaves Original data GEO bulk
291 ATR1 OE -0.51 >More info -0.02 >More info WT for ATR1/MYB51 Original data GEO bulk
292 rosette leaves fdh -0.54 >More info 0.02 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
293 piffq FR 3h 0.50 >More info 0.01 >More info WT FR 3h whole seedling Original data GEO bulk
294 Shoot submergence 7h -0.50 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
295 Col-0 mbs1-1 HL 3h 0.52 >More info -0.03 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
296 Total RNA 35S:HF-RPL18 0.55 >More info -0.07 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
297 myb21 myb24 stage2 0.51 >More info -0.03 >More info WT stage2 Original data GEO bulk
298 sav1-1 light 0.54 >More info -0.07 >More info Col-0 light seedlings Original data GEO bulk
299 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
300 MPK6 ox Shoot Hypoxia 0.61 >More info -0.14 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
301 Leafminer damaged seedlings -0.10 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
302 light 0.64 >More info -0.18 >More info dark light seedling Original data GEO bulk
303 ubc13A-es -0.51 >More info 0.08 >More info Col-es root Original data GEO bulk
304 Col BTH -0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
305 Laer pretreat GA Flg22 1h -0.35 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
306 spx1 spx2 resupplied Pi 4h -0.57 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
307 Heat shock optimum -0.43 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk