4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on csn3-1 light
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "csn3-1 light"  Help Download transcriptome of top 30
Score Experiment Correlation from
csn3-1 light		 Correlation to
csn3-1 light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 csn3-1 light 1.00 >More info 1.00 >More info WT light Original data GEO bulk
2 csn5 (csn5a-2 csn5b) light 0.92 >More info 0.92 >More info WT light Original data GEO bulk
3 csn4-1 dark 0.88 >More info 0.86 >More info WT light Original data GEO bulk
4 csn4-1 mutant 0.81 >More info 0.81 >More info WT dark Original data GEO bulk
5 csn3-1 dark 0.79 >More info 0.79 >More info WT dark Original data GEO bulk
6 csn5 (csn5a-2 csn5b) dark 0.77 >More info 0.78 >More info WT dark Original data GEO bulk
7 cop1 Seedling BL+ABA 0.70 >More info 0.83 >More info WT Seedling BL+ABA Original data GEO bulk
8 UV 0.71 >More info 0.79 >More info WT aerial region Original data GEO bulk
9 cop1 Seedling BL 0.66 >More info 0.79 >More info WT Seedling BL Original data GEO bulk
10 Imidazolinone EC50 0.67 >More info 0.76 >More info Carrier (Imidazolinone) Original data GEO bulk
11 ice1 control 0.67 >More info 0.73 >More info WT control Original data GEO bulk
12 LTN008-2 aza-dc 0.69 >More info 0.71 >More info LTN012-2 Mock Original data
13 atmyc2 cop1 Seedling BL 0.64 >More info 0.76 >More info WT Seedling BL Original data GEO bulk
14 Sulfometuron EC50 0.67 >More info 0.71 >More info Carrier Original data GEO bulk
15 sta1 0.70 >More info 0.66 >More info WT Original data GEO bulk
16 ice1 6H Cold 0.63 >More info 0.73 >More info WT 6H Cold Original data GEO bulk
17 Cor 10h 0.62 >More info 0.72 >More info Mock 10h Cor Original data GEO bulk
18 seedlings +5AC 0.64 >More info 0.69 >More info control seedlings 10-day old whole seedling Original data GEO bulk
19 smg7b-1 0.61 >More info 0.72 >More info WT whole plant Original data GEO bulk
20 dor drought 0.51 >More info 0.81 >More info WT drought Original data GEO bulk
21 Col-0 under 4 days salt 0.64 >More info 0.67 >More info Col-0 under control 4 days salt treatment rosette Original data
22 sni1 0.54 >More info 0.77 >More info WT Original data GEO bulk
23 WT powdery mildew 0.63 >More info 0.68 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
24 SLWF infested 0.60 >More info 0.71 >More info SLWF uninfested rosette tissue Original data GEO bulk
25 Mutant cry1 (High Light) -0.64 >More info -0.66 >More info Col-0 (High Light) Original data GEO bulk
26 cry1 high light -0.64 >More info -0.66 >More info Col-O high light Original data GEO bulk
27 irradiated leaf (WT 1d) 0.49 >More info 0.81 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
28 Col ozone 2d 0.58 >More info 0.72 >More info Col clean-air 2d ozone Original data GEO bulk
29 lht1 untreated 0.61 >More info 0.69 >More info WT untreated untreated leaf Original data GEO bulk
30 ABA control 0.55 >More info 0.74 >More info No ABA control Original data GEO bulk
31 aox1a(line) MLD stressed 0.60 >More info 0.68 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
32 DFPM 0.60 >More info 0.68 >More info control Original data GEO bulk
33 ABA DFPM 0.62 >More info 0.66 >More info control Original data GEO bulk
34 apum23 0.58 >More info 0.70 >More info WT (Col-3) aerial parts Original data GEO bulk
35 Primisulfuron EC50 0.58 >More info 0.69 >More info Carrier (primisulfuron) Original data GEO bulk
36 smg5-2 0.59 >More info 0.68 >More info WT whole plant Original data GEO bulk
37 Botrytis cinerea 48h 0.58 >More info 0.69 >More info control 48h Original data GEO bulk
38 clf-28 swn-7 0.63 >More info 0.64 >More info Col whole plant Original data GEO bulk
39 WT-SA 0.59 >More info 0.68 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
40 Col leaves 48h LT 0.60 >More info 0.66 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
41 msh1 recA3 heat shock 0.53 >More info 0.73 >More info WT heat shock above-ground parts Original data GEO bulk
42 upf3 0.59 >More info 0.67 >More info WT whole plant Original data GEO bulk
43 cpr5 0.54 >More info 0.71 >More info WT(COL) Original data GEO bulk
44 35S:RPS4 eds1-2 24h -0.58 >More info -0.67 >More info 35S:RPS4 24h leaves Original data
45 gh3.5-1D 48 hpi 0.57 >More info 0.68 >More info Col-0 uninoculated Original data GEO bulk
46 bZIP1ko mutant N+Light- 0.54 >More info 0.71 >More info WT-sib N+Light- whole plant Original data GEO bulk
47 cpr5 0.56 >More info 0.68 >More info WT seedling Original data GEO bulk
48 Cor 24h 0.53 >More info 0.71 >More info Mock 24h Cor Original data GEO bulk
49 IMI 4mM 0.65 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
50 AvrRpt2 Col-0 6hpi 0.58 >More info 0.65 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
51 Col-0 WT HL 3h 0.57 >More info 0.66 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
52 Mutant siz1-3 0.59 >More info 0.64 >More info Col-0 Original data GEO bulk
53 siz1-3 control 0.59 >More info 0.64 >More info Col-0 control Original data GEO bulk
54 Triazolopyrimidine EC50 0.59 >More info 0.64 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
55 CMP 24hr 0.55 >More info 0.68 >More info Acetone 24hr root Original data GEO bulk
56 toc1-1-57hr 0.52 >More info 0.71 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
57 AtLysM RLK1 mutant water 0.55 >More info 0.67 >More info WT water Original data GEO bulk
58 cpr5npr1 0.54 >More info 0.68 >More info WT(COL) Original data GEO bulk
59 del1-1 mutant 5d uninfected 0.52 >More info 0.70 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
60 upf1 0.57 >More info 0.65 >More info WT whole plant Original data GEO bulk
61 BLM+INA 0.53 >More info 0.69 >More info CK BLM and INA seedling Original data
62 sicy-192 gun1-101 cotyledons 0.63 >More info 0.59 >More info WT cotyledons cotyledons Original data
63 long 17-degree- 0.41 >More info 0.81 >More info control long Original data GEO bulk
64 sid2 -0.48 >More info -0.74 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
65 irradiated leaf (cmt 1d) 0.49 >More info 0.73 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
66 CMP 4hr 0.57 >More info 0.64 >More info Acetone 4hr root Original data GEO bulk
67 SPT4-R3 seedlings0 DAS 0.60 >More info 0.61 >More info Col-0 seedlings0 DAS seedlings Original data
68 Fenclorim 4hr 0.56 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
69 nia1nia2 0.61 >More info 0.60 >More info Col-0 whole seedlings Original data GEO bulk
70 35S:RPS4 eds1-2 8h -0.54 >More info -0.67 >More info 35S:RPS4 8h leaves Original data
71 Shoot -K 0.55 >More info 0.65 >More info Control-shoot Original data GEO bulk
72 K starvation (shoot) 0.55 >More info 0.65 >More info Ws (shoot) Original data GEO bulk
73 35S::PI ap3-3 35S::AP-GR +DEX 0.40 >More info 0.80 >More info 0hr DEX Original data GEO bulk
74 RPL18 TuMV inoculated polysomal RNA 0.51 >More info 0.69 >More info mock inoculated polysomal RNA PO Original data GEO bulk
75 Cor hrpS 10h 0.59 >More info 0.61 >More info Mock 10h Cor hrpS Original data GEO bulk
76 Nicotinamide-81hr 0.55 >More info 0.64 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
77 WT Seedling BL+ABA 0.53 >More info 0.66 >More info WT Seedling BL Original data GEO bulk
78 ARR21C-ox 0.62 >More info 0.57 >More info Col-0 Original data ARR21C overexpression
79 PAHs stress 0.54 >More info 0.65 >More info exp control phenanthrene whole plants Original data GEO bulk
80 HopZ1a treated 0.52 >More info 0.67 >More info col Original data GEO bulk
81 seedling 1.5h after Gamma WT 0.48 >More info 0.71 >More info seedling day 1 unirradiated WT 1.5h Original data
82 Osmotic Stress 24 h (shoot) 0.55 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
83 CLO 4mM 0.54 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
84 ice1 3H Cold 0.62 >More info 0.56 >More info WT 3H Cold Original data GEO bulk
85 seedling 24h after Gamma atm-1 0.51 >More info 0.67 >More info seedling day 2 unirradiated atm-1 24h Original data
86 seedling 24h after Gamma WT 0.49 >More info 0.69 >More info seedling day 2 unirradiated WT 24h Original data
87 bak1-3 +Pep2 10h 0.56 >More info 0.61 >More info WT +Pep2 10h Pep2 Original data GEO bulk
88 Glyphosate EC50 0.50 >More info 0.67 >More info Carrier (Glyphosate) Original data GEO bulk
89 low water potential 0.53 >More info 0.64 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
90 Col whole leaf 5dpi 0.53 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
91 nas4x leaves - Fe -0.51 >More info -0.66 >More info WT leaves - Fe Leaves Original data GEO bulk
92 Mutant NahG(leaf) -0.47 >More info -0.70 >More info Col-0 (leaf) Original data GEO bulk
93 erf5 erf6 +chitooctaose -0.47 >More info -0.70 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
94 pab polysome 0.50 >More info 0.66 >More info WT polysome seedling shoot/aerial seedling Original data
95 SA 0.51 >More info 0.65 >More info WT mock Whole seedling Original data GEO bulk
96 WT in -N 0.52 >More info 0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
97 lht1 PstDC3000 48h 0.56 >More info 0.60 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
98 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
99 FarRed Light 4 h 0.38 >More info 0.78 >More info White Light 4 h Original data Light treatments
100 eds16 whole leaf 5dpi -0.49 >More info -0.67 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
101 pnp1-1 1wk +P 0.58 >More info 0.58 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
102 CMV-WT 0.53 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
103 GA4 3 h (ga1 seed) 0.55 >More info 0.60 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
104 cdpk6-yfp 0.56 >More info 0.59 >More info Kan seedlings Original data GEO bulk
105 seedling 3h after Gamma WT 0.43 >More info 0.72 >More info seedling day 1 unirradiated WT 3h Original data
106 UV Stress 24 h (shoot) 0.53 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
107 des1 water 0.56 >More info 0.58 >More info WT water water leaf Original data GEO bulk
108 JMJ24 knockout 0.50 >More info 0.64 >More info WT Original data GEO bulk
109 WT cold 0.49 >More info 0.65 >More info WT control All aerial tissue Original data GEO bulk
110 S58-2 0.46 >More info 0.68 >More info wt Original data GEO bulk
111 BLM 0.49 >More info 0.65 >More info CK BLM seedling Original data
112 35S-MIF1 light grown 0.42 >More info 0.72 >More info Light-grown WT control Original data GEO bulk
113 Col whole leaf amplified 5 dpi 0.46 >More info 0.67 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
114 RPL18 TuMV inoculated total RNA 0.46 >More info 0.67 >More info mock inoculated total RNA PO Original data GEO bulk
115 Mutant gh3.5-1D (AvrRpt2) 0.50 >More info 0.63 >More info Col-0 (AvrRpt2) Original data GEO bulk
116 DC3000 24h 0.52 >More info 0.61 >More info Mock 24h DC3000 Original data GEO bulk
117 toc1-1-85hr 0.49 >More info 0.64 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
118 HopZ1a treated ulp1c ulp1d 0.48 >More info 0.65 >More info col Original data GEO bulk
119 Shoot -Cs 0.43 >More info 0.70 >More info Control-shoot Original data GEO bulk
120 Mutant axr3-1 0.51 >More info 0.61 >More info Col Original data GEO bulk
121 9 hr Hypoxia 1 hr recovery Total RNA 0.52 >More info 0.60 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
122 Col-0 DCA 48h 0.48 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
123 rpoTmp(line) MLD stressed 0.54 >More info 0.57 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
124 35:SUB1A 0.47 >More info 0.64 >More info WT whole seedling Original data GEO bulk
125 Phytoprostane A1 4 h 0.59 >More info 0.51 >More info Col-0 Original data GEO bulk
126 ice1 24H Cold 0.53 >More info 0.57 >More info WT 24H Cold Original data GEO bulk
127 pnp1-1 1wk -P 0.53 >More info 0.57 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
128 pnp1-1 3h +P 0.52 >More info 0.58 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
129 sdg2 0.59 >More info 0.51 >More info wt seedling Original data GEO bulk
130 Mutant siz1-3 (Drought) 0.57 >More info 0.53 >More info Col-0 (Drought) Original data GEO bulk
131 siz1-3 drought 0.57 >More info 0.53 >More info Col-0 drought Original data GEO bulk
132 Red/FR Light 4 h -0.35 >More info -0.75 >More info FarRed Light 4 h Original data Light treatments
133 rosettes WT drought 0.49 >More info 0.61 >More info rosettes WT watered Original data GEO bulk
134 pad4-PsmES4326-24hpi -0.49 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
135 toc1-1-81hr 0.45 >More info 0.65 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
136 aox1a:rpoTmp untreated 0.45 >More info 0.65 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
137 Col BTH 0.42 >More info 0.67 >More info Col rosettes Original data GEO bulk
138 9 hr Hypoxia 1 hr recovery IP RNA 0.53 >More info 0.55 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
139 Fenclorim 24hr 0.52 >More info 0.55 >More info Acetone 24hr root Original data GEO bulk
140 A. thaliana-A. lyrata hybrid -0.52 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
141 nia1nia2noa1-2 0.56 >More info 0.51 >More info Col-0 whole seedlings Original data GEO bulk
142 Salt Stress 24 h (shoot) 0.46 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
143 Col-0 INA 48h 0.39 >More info 0.68 >More info Col-0 MOCK 48h Original data GEO bulk
144 sicy-192 cotyledons 0.42 >More info 0.65 >More info WT cotyledons cotyledons Original data
145 toc1-1-61hr 0.50 >More info 0.57 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
146 ahg2-1sid2-2 0.37 >More info 0.70 >More info WT (Col) control Original data GEO bulk
147 ceh1 mutant 0.47 >More info 0.60 >More info Parent line Original data
148 Selenate (shoot) 0.56 >More info 0.50 >More info Ws (shoot) Original data GEO bulk
149 gis5 seedlings 0.53 >More info 0.53 >More info WT seedlings Whole seedlings (leaves + roots) Original data
150 amiR-tor induced 6d 0.50 >More info 0.56 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
151 amiR-tor induced 3d 0.51 >More info 0.55 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
152 Shoot Selenate 0.56 >More info 0.50 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
153 B.cinerea 18 h infection 0.55 >More info 0.51 >More info Mock 18 h Original data Botrytis cinerea infection
154 Botrytis cinerea 18h 0.55 >More info 0.51 >More info control 18h Original data GEO bulk
155 Blue Light 4 h 0.35 >More info 0.71 >More info White Light 4 h Original data Light treatments
156 pvip1 pvip2 0.49 >More info 0.57 >More info Col-0 whole rosettes Original data GEO bulk
157 pmr4-1 control 0.48 >More info 0.58 >More info WT control uninoculated Original data GEO bulk
158 Col-0 48 hpi 0.48 >More info 0.58 >More info Col-0 uninoculated Original data GEO bulk
159 S15-118 0.38 >More info 0.68 >More info wt Original data GEO bulk
160 TaFLS overexpression line (OE2) -0.53 >More info -0.52 >More info Col-0 Rosette leaves Original data
161 60m light 0.33 >More info 0.72 >More info before light whole seedlings Original data GEO bulk
162 Nicotinamide-57hr 0.48 >More info 0.57 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
163 Laer treat paclobutrazol (PAC) 0.46 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
164 coi1-2 0.39 >More info 0.65 >More info Col-0 mock Whole seedling Original data GEO bulk
165 sid2-1 cold -0.41 >More info -0.63 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
166 npr1-1 SA -0.53 >More info -0.50 >More info Col-0 SA complete seedling Original data
167 plant (tga2-5-6) 4h phytoprostane A1 0.56 >More info 0.47 >More info plant (tga2-5-6) 4h control Original data GEO bulk
168 penta Alternaria 3dpi 0.54 >More info 0.49 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
169 short 12-degree- 0.24 >More info 0.79 >More info control short Original data GEO bulk
170 hrpA 7h 0.46 >More info 0.57 >More info Mock 7h hrpA Original data GEO bulk
171 abh1 -ABA 0.44 >More info 0.59 >More info Col-0 -ABA Original data GEO bulk
172 ataf1-1 mutant Col-0 Bgh inoculated 0.51 >More info 0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
173 Chitosan 3h Treatment 0.55 >More info 0.47 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
174 ARR22-ox (t-zeatin 3 h) 0.51 >More info 0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
175 Col whole leaf 7dpi 0.47 >More info 0.55 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
176 Pto inoculated 0.46 >More info 0.56 >More info col Original data GEO bulk
177 efr-1 +elf18 10h -0.43 >More info -0.59 >More info WT +elf18 10h elf18 Original data GEO bulk
178 WT chitooctaose 0.49 >More info 0.53 >More info WT water Original data GEO bulk
179 WT-Dry 0.38 >More info 0.64 >More info WT-CK dehydration treatment 1h Original data
180 seedling 24h after HZE WT 0.32 >More info 0.70 >More info seedling day 2 unirradiated WT 24h Original data
181 long 12-degree- 0.40 >More info 0.61 >More info control long Original data GEO bulk
182 rosettes myoox drought 0.46 >More info 0.55 >More info rosettes myoox watered Original data GEO bulk
183 Nicotinamide-53hr 0.47 >More info 0.54 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
184 downy mildew cotyledons late stage 0.39 >More info 0.62 >More info mock inoculated Cotyledons Original data GEO bulk
185 Mature callus 0.44 >More info 0.57 >More info Young callus hypocotyls Original data GEO bulk
186 camta2/3 warm 0.46 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
187 E2Fa-Dpa 0.46 >More info 0.55 >More info WT Original data GEO bulk
188 sfr3 control 0.35 >More info 0.66 >More info WT control All aerial tissue Original data GEO bulk
189 eif3h non-polysome 0.55 >More info 0.45 >More info WT non-polysome Original data GEO bulk
190 toc1-1-49hr 0.51 >More info 0.49 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
191 albino Ds13-2198-1 -0.52 >More info -0.48 >More info control Original data GEO bulk
192 phyB mutant 22C 10hrs -0.43 >More info -0.57 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
193 PBZ 0.34 >More info 0.66 >More info none PBZ Rosette Original data GEO bulk
194 A6 mutant 0.41 >More info 0.59 >More info WT rosette leaves Rosette leaves Original data GEO bulk
195 E.coli TUV86 2 fliC 7h 0.46 >More info 0.54 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
196 Elevated CO2 AMPLE N DAY 0.41 >More info 0.59 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
197 hira-root -0.45 >More info -0.55 >More info WT-root root Original data
198 DC3000 2 h (leaf) 0.35 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
199 Heat no recovery 0.44 >More info 0.55 >More info Mock no recovery seedling Original data GEO bulk
200 OH1 0.44 >More info 0.55 >More info Col-0 leaves Original data GEO bulk
201 WT 24H Cold 0.43 >More info 0.56 >More info WT control Original data GEO bulk
202 gul2-1 mutant 0.46 >More info 0.53 >More info WT 7 day-old whole seedlings Original data
203 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.48 >More info -0.51 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
204 seedling 24h after HZE atm-1 0.28 >More info 0.71 >More info seedling day 2 unirradiated atm-1 24h Original data
205 AgNO3 3 h 0.44 >More info 0.54 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
206 Phaseolicola 2 h (leaf) 0.37 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
207 rosettes drought 0.40 >More info 0.58 >More info rosettes watered Original data GEO bulk
208 Laer pretreat GA Flg22 1h 0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
209 atm3 -0.30 >More info -0.68 >More info Col0 whole plant Original data GEO bulk
210 atgsnor1-1-avrB-6h 0.37 >More info 0.61 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
211 Light 0.5h polysome-bound 0.38 >More info 0.60 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
212 anac017-2 AntimycinA 3h -0.44 >More info -0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
213 embryo paclobutrazol 0.42 >More info 0.56 >More info embryo-control paclobutrazol embryo Original data GEO bulk
214 pmr5 pmr6 0.42 >More info 0.56 >More info Col-0 Original data GEO bulk
215 WT seedlings MV 0.47 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
216 Night Time Treatment 0.33 >More info 0.65 >More info Night Time Control 1hr white light pulse aerial rosette Original data
217 Mutant iaa5_6_19 0.37 >More info 0.60 >More info Col Original data GEO bulk
218 short 17-degree- 0.28 >More info 0.69 >More info control short Original data GEO bulk
219 Col whole leaf 5 dpi 0.37 >More info 0.60 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
220 Nicotinamide-85hr 0.46 >More info 0.51 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
221 Light 0.5h steady-state 0.31 >More info 0.66 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
222 WT 24h cold 0.43 >More info 0.54 >More info WT warm 24h cold entire aerial part Original data GEO bulk
223 Leafminer damaged seedlings 0.40 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
224 scrm-D:mute 0.55 >More info 0.41 >More info Col-0 WT whole seedling Original data GEO bulk
225 Cycloheximide 3 h 0.44 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
226 Octopus overexpressor 35SDYG25 0.36 >More info 0.60 >More info WS Original data GEO bulk
227 camta1/2/3 warm 0.46 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
228 aba3-1 0.33 >More info 0.63 >More info wt Original data GEO bulk
229 WT 2-4h Xanthomonas 0.43 >More info 0.53 >More info WT T0 Original data GEO bulk
230 Col leaves 120h LT 0.45 >More info 0.51 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
231 8-DAC chr11-1chr17-1 0.45 >More info 0.51 >More info 8-DAC Col-0 leaf explants Original data
232 S14-150 0.27 >More info 0.68 >More info wt Original data GEO bulk
233 Elevated CO2 fully expanded leaf 0.52 >More info 0.43 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
234 Mutant sav3-2 (WL) 0.31 >More info 0.64 >More info Col-0 (WL) Original data GEO bulk
235 mpk6-ko Flg22 4h 0.43 >More info 0.52 >More info mpk6-ko H2O 4h Original data GEO bulk
236 WT 3h -P 0.37 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
237 ASL9-ox -0.44 >More info -0.51 >More info WT aerial parts of seedlings Original data GEO bulk
238 sav3-2 light 0.31 >More info 0.64 >More info Col-0 light seedlings Original data GEO bulk
239 Col leaf scrape 5 dpi 0.40 >More info 0.54 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
240 Stem tissue 2 days NAA 0.26 >More info 0.68 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
241 pepr1-1 Pepr2-3 +Pep2 2h -0.40 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
242 Differentiation 12h 0.38 >More info 0.56 >More info Differentiation 0h leaves Original data
243 col 24h4c set4 0.38 >More info 0.56 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
244 toc1-1-65hr 0.51 >More info 0.43 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
245 long 10-degree- 0.35 >More info 0.59 >More info control long Original data GEO bulk
246 WT salt 12 h 0.44 >More info 0.50 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
247 35S:RPS4 eds1-2 2h -0.33 >More info -0.61 >More info 35S:RPS4 2h leaves Original data
248 Elevated CO2 AMPLE N NIGHT 0.35 >More info 0.59 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
249 rosette Dark Wounded 0.27 >More info 0.66 >More info rosette Dark Control Original data GEO bulk
250 Heat and anoxia 0.38 >More info 0.55 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
251 WT NAA 2h -0.27 >More info -0.66 >More info WT 0h Leaf tissue Original data GEO bulk
252 oas-a1.1 Cd 24h 0.40 >More info 0.53 >More info Cd 24h root Shoot Original data GEO bulk
253 OE WRKY63.3 high light 0.37 >More info 0.56 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
254 Dark 40 min pls UV-A 5 min 0.33 >More info 0.60 >More info Dark 45 min Original data Light treatments
255 Col-0 norflurazon 0.43 >More info 0.50 >More info Col-0 control Original data GEO bulk
256 Stem tissue 5 days NAA 0.36 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
257 safener treated 0.41 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
258 root endodermis and quiescent center pH4.6 0.31 >More info 0.62 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
259 prors1-2 leaves 0.42 >More info 0.51 >More info Col-0 leaves leaves Original data
260 seedlings-week-old RECA1-overexpressing
transgenic		 0.36 >More info 0.57 >More info seedlings-week-old Col-0 seedlings Original data
261 GST 4 h (leaf) 0.40 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
262 edr1 18 h powdery mildew 0.39 >More info 0.53 >More info Col-0 18 h powdery mildew Original data GEO bulk
263 cpr5scv1 0.40 >More info 0.52 >More info WT(COL) Original data GEO bulk
264 embryo ABA 0.38 >More info 0.54 >More info embryo-control ABA embryo Original data GEO bulk
265 arf2 brz -0.41 >More info -0.51 >More info arf2 mock Original data GEO bulk
266 npr1-3 MOCK 48h -0.29 >More info -0.63 >More info Col-0 MOCK 48h Original data GEO bulk
267 WT flg22 2h 0.41 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
268 pnp1-1 3h -P 0.42 >More info 0.50 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
269 Starch sheath 5 days MS incubation 0.35 >More info 0.57 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
270 12h volatiles Sm. R3089 -0.33 >More info -0.59 >More info 12h untreated whole seedling Original data GEO bulk
271 Ws-2 high light 0.33 >More info 0.59 >More info Ws-2 low light Original data GEO bulk
272 col-5 DC3000 12h 0.42 >More info 0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
273 flu 0.39 >More info 0.52 >More info WT Col Original data GEO bulk
274 Laer Alternaria 3dpi -0.40 >More info -0.51 >More info Laer Control leaf discs Original data GEO bulk
275 WT-NOCO2 INFECTED 0.37 >More info 0.54 >More info WT-MOCK Original data GEO bulk
276 Col-0-avrB-6h 0.35 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
277 dicamba 0.37 >More info 0.54 >More info WT mock whole seedling Original data GEO bulk
278 col-5 hrpA 12h 0.37 >More info 0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
279 pmr5 0.39 >More info 0.52 >More info Col-0 Original data GEO bulk
280 gun1gun5 far-red pretreated -0.34 >More info -0.56 >More info WT far-red pretreated Original data GEO bulk
281 gun1-9 norflurazon 0.55 >More info 0.35 >More info gun1-9 control Original data GEO bulk
282 Norflurazon 0.39 >More info 0.51 >More info Col-0 Original data GEO bulk
283 WT Col-0 Bgh inoculated 0.39 >More info 0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
284 Norflurazon 0.39 >More info 0.51 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
285 cpr5npr1svi1 0.36 >More info 0.54 >More info WT(COL) Original data GEO bulk
286 ahg1-1 0.35 >More info 0.55 >More info ABA control Original data GEO bulk
287 seedling 1.5h after Gamma atm-1 0.38 >More info 0.52 >More info seedling day 1 unirradiated atm-1 1.5h Original data
288 5-Triiodobenzoic acid3 h 0.39 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
289 Mutant sav3-2 (SH) 0.26 >More info 0.63 >More info Col-0 (SH) Original data GEO bulk
290 GV3101 3hpi -0.37 >More info -0.52 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
291 QK HS 0.35 >More info 0.54 >More info QK control heat shocked seedling Original data GEO bulk
292 Col-0 drought 0.39 >More info 0.50 >More info Col-0 control Original data GEO bulk
293 sav3-2 shade 0.26 >More info 0.63 >More info Col-0 shade seedlings Original data GEO bulk
294 30m light 0.19 >More info 0.70 >More info before light whole seedlings Original data GEO bulk
295 Dark 40min pls UV-AB 5min 0.33 >More info 0.55 >More info Dark 45 min Original data Light treatments
296 root endodermis and quiescent center 40 mM NaCl 0.34 >More info 0.54 >More info root endodermis and quiescent center Original data GEO bulk
297 gun5 norflurazon 0.51 >More info 0.37 >More info gun5 control Original data GEO bulk
298 erf104-ko Flg22 4h 0.28 >More info 0.60 >More info erf104-ko H2O 4h Original data GEO bulk
299 vte2-1 3d vernalization 0.37 >More info 0.51 >More info WT 3d vernalization Original data GEO bulk
300 Col-O high light 0.35 >More info 0.53 >More info Col-O bule light Original data GEO bulk
301 Day Time Treatment 0.35 >More info 0.53 >More info Day Time Control 1hr white light pulse aerial rosette Original data
302 TNT-seedlings 0.32 >More info 0.55 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
303 6h +Pi -0.33 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
304 root cortex pH4.6 0.33 >More info 0.54 >More info root cortex pH5.7 Original data GEO bulk
305 arp6-10 24h at 27 ºC 0.51 >More info 0.36 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
306 flu over-tAPX 0.35 >More info 0.52 >More info WT Col Original data GEO bulk
307 Col-0 37C 0.35 >More info 0.52 >More info Col-0 22C Original data GEO bulk
308 lug3 leaves -0.36 >More info -0.51 >More info WT-leaves matured rosette leaves Original data GEO bulk
309 Cocultivation 8 hrs root 0.35 >More info 0.52 >More info Mock cocultivation 8 hrs root Root Original data
310 Whole root - low pH 24H 0.30 >More info 0.57 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
311 msh1 variegation Col-0 0.29 >More info 0.58 >More info WT Col-0 above ground part of plant Original data GEO bulk
312 eif3h polysome 0.52 >More info 0.34 >More info WT polysome Original data GEO bulk
313 Dark 44min pls RedLigh 1min 0.30 >More info 0.56 >More info Dark 45 min Original data Light treatments
314 npr1-PsmES4326-24hpi -0.34 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
315 WT Red light 1h 0.34 >More info 0.52 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
316 Transgenic LEC2GR Seedling 1h Dex 0.34 >More info 0.52 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
317 npr1-3 DCA 48h 0.36 >More info 0.50 >More info npr1-3 MOCK 48h Original data GEO bulk
318 WT leaves - Fe 0.35 >More info 0.51 >More info WT leaves + Fe Leaves Original data GEO bulk
319 hrcC 0.35 >More info 0.51 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
320 camta1/2/3 24h cold 0.35 >More info 0.51 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
321 erf5 erf6 -0.54 >More info -0.31 >More info WT+water water seedlings Original data GEO bulk
322 penta mutant (higher order mutant) -0.31 >More info -0.54 >More info col control (higher order mutant) Original data GEO bulk
323 camta1/3 warm 0.32 >More info 0.53 >More info WT warm entire aerial part Original data GEO bulk
324 gh3.5D uninoculated -0.32 >More info -0.53 >More info Col-0 48 hpi Original data GEO bulk
325 Heat 0.35 >More info 0.50 >More info Control 90 minutes at 38°C. Original data GEO bulk
326 Leaf wounded 0.28 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
327 Salt Stress 24 h (root) 0.34 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
328 Genotoxic Stress 3 h (shoot) 0.16 >More info 0.68 >More info Stress mock 3 h (shoot) Original data Stress treatments
329 Mutant axr3-1 (IAA) 0.29 >More info 0.55 >More info Col (IAA) Original data GEO bulk
330 FarRed Light 45min -0.14 >More info -0.70 >More info White Light 45min Original data Light treatments
331 +GA-180mins -0.32 >More info -0.51 >More info -180mins whole plant Original data GEO bulk
332 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
333 oas-a1.1 Cd 18h 0.27 >More info 0.55 >More info Cd 18h root Root Original data GEO bulk
334 spx1 spx2 complete 0.51 >More info 0.30 >More info WT complete seedlings Original data
335 R. solani AG8 0.30 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
336 Mutant nph4-1_arf19-1 0.28 >More info 0.52 >More info Col Original data GEO bulk
337 Light 3day wt -0.25 >More info -0.55 >More info 0h wt Original data
338 rcf1-1 cold 24h 0.24 >More info 0.56 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
339 rsa3-1 Na 24h 0.19 >More info 0.61 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
340 ABA 1 h 0.29 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
341 ABA 3 h 0.29 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
342 GR-bdl DEX IAA 0.29 >More info 0.50 >More info GR-bdl IAA Original data GEO bulk
343 2d dark-grown WT(Col-0)/1 hr red light 0.28 >More info 0.51 >More info 2d dark-grown WT seedling Original data GEO bulk
344 dsr1 -0.23 >More info -0.56 >More info WT mock Whole seedling Original data GEO bulk
345 Tsu-1 -Fe 24h 0.25 >More info 0.54 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
346 Tsu -Fe 24h Roots 0.25 >More info 0.54 >More info Tsu +Fe 24h Roots Original data GEO bulk
347 ein2 0.50 >More info 0.28 >More info Col-0 Leaves Original data GEO bulk
348 Red Light 4 h -0.12 >More info -0.66 >More info White Light 4 h Original data Light treatments
349 Mutant iaa5_6_19(IAA) 0.16 >More info 0.62 >More info Col (IAA) Original data GEO bulk
350 long 8-degree- 0.25 >More info 0.53 >More info control long Original data GEO bulk
351 AFB1 0h 0.23 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
352 Whole root - low pH 12H 0.28 >More info 0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
353 4C 24h 0.22 >More info 0.56 >More info 4C 0h Original data GEO bulk
354 Col-0 INA 6d 0.23 >More info 0.54 >More info Col-0 MOCK 6d Original data GEO bulk
355 ahg2-1 0.26 >More info 0.51 >More info WT (Col) control Original data GEO bulk
356 Bay-0-1h IAA -0.26 >More info -0.51 >More info Bay-0-0h IAA whole plant Original data GEO bulk
357 Col-0 V. longisporum-inoculated 48 hpi 0.23 >More info 0.54 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
358 msh1 recA3 untreated 0.13 >More info 0.63 >More info WT untreated above-ground parts Original data GEO bulk
359 pif3 Dark 0h -0.16 >More info -0.60 >More info WT Dark 0h etiolated seedling Original data GEO bulk
360 Red Light 45min -0.20 >More info -0.55 >More info White Light 45min Original data Light treatments
361 RRE2 0.19 >More info 0.56 >More info Col C Original data GEO bulk
362 abi4-102 +lincomycin -0.25 >More info -0.50 >More info Col-0 +lincomycin Original data GEO bulk
363 whole roots 140 mM NaCl 4 hour 0.24 >More info 0.50 >More info whole roots standard Original data GEO bulk
364 cct-1 mutant 9-day-old seedlings above-ground
portions		 0.24 >More info 0.50 >More info WT 7-day-old seedlings above-ground portions seedling Original data
365 short 8-degree- 0.22 >More info 0.51 >More info control short Original data GEO bulk
366 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
367 gun1-1 -lincomycin -0.18 >More info -0.54 >More info Col-0 -lincomycin Original data GEO bulk
368 root longitudinal zone-1 pH 4.6 0.19 >More info 0.52 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
369 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
370 35SAvr 0.17 >More info 0.52 >More info Ecotype Col Original data GEO bulk
371 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
372 vte2 leaves 120h LT 0.64 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
373 short 14-degree- 0.17 >More info 0.51 >More info control short Original data GEO bulk
374 4C 24h(SOIL) 0.17 >More info 0.50 >More info 4C 0h(SOIL) Original data GEO bulk
375 hai1-2 low water potential 0.13 >More info 0.53 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
376 Col-0 shade -0.15 >More info -0.51 >More info Col-0 light seedlings Original data GEO bulk
377 Got7 UV 0.15 >More info 0.50 >More info Got7 mock UV seedling Original data
378 nar1-4/- 0.12 >More info 0.50 >More info WT whole seedling Original data GEO bulk
379 sng1 0.09 >More info 0.51 >More info WT aerial region Original data GEO bulk
380 Heat shock optimum -0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
381 pvip1 pvip2 seedling 0.61 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
382 SA Treated 0.51 >More info 0.08 >More info Water Original data GEO bulk
383 IAA 1 h -0.08 >More info -0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
384 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
385 SA 4mM 0.50 >More info 0.08 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
386 root - 08% oxygen - 30min 0.05 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
387 ABI3GR +DEX +CHX 0.04 >More info 0.50 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
388 NahG 0.06 >More info -0.59 >More info Col-0 Leaves Original data GEO bulk
389 empty vector IAA Treated -0.01 >More info -0.50 >More info empty vector mock Original data GEO bulk
390 Estradiol4 days -0.05 >More info 0.52 >More info Col Original data GEO bulk
391 estradiol induced LEC1 -0.05 >More info 0.52 >More info control Original data GEO bulk
392 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
393 tt4 UV 0.12 >More info -0.53 >More info UV aerial region Original data GEO bulk
394 CCA1-ox 6am non-polysomal -0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
395 root longitudinal zone-1 -Fe 0.13 >More info -0.51 >More info root longitudinal zone-1 standard Original data GEO bulk
396 Light 3day hml -0.23 >More info 0.54 >More info 0h hml Original data