4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root longitudinal zone-1 -Fe
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List of experiments correlated with "root longitudinal zone-1 -Fe"  Help Download transcriptome of top 30
Score Experiment Correlation from
root longitudinal zone-1 -Fe		 Correlation to
root longitudinal zone-1 -Fe		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root longitudinal zone-1 -Fe 1.00 >More info 1.00 >More info root longitudinal zone-1 standard Original data GEO bulk
2 root longitudinal zone-2 -Fe 0.85 >More info 0.93 >More info root longitudinal zone-2 standard Original data GEO bulk
3 root longitudinal zone-4 -Fe 0.76 >More info 0.70 >More info root longitudinal zone-4 standard Original data GEO bulk
4 root longitudinal zone-3 -Fe 0.56 >More info 0.75 >More info root longitudinal zone-3 standard Original data GEO bulk
5 root - 08% oxygen - 2h 0.66 >More info 0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
6 iron minus 6 h 0.52 >More info 0.65 >More info iron +6 h root Original data GEO bulk
7 COL-0-Fe--shoot 0.53 >More info 0.59 >More info COL-0-Ctrl--shoot shoot Original data
8 Col -Fe 0.56 >More info 0.55 >More info Col-es root Original data GEO bulk
9 MG132 3 h 0.55 >More info 0.49 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
10 whole roots -Fe 48 hour 0.47 >More info 0.54 >More info whole roots standard Original data GEO bulk
11 Inflorescences Trp1 -0.47 >More info -0.53 >More info Inflorescences ler inflorescences Original data GEO bulk
12 COL-0-Fe--root 0.49 >More info 0.51 >More info COL-0-Ctrl--root root Original data
13 SCR-GR Time 12H Dex 0.68 >More info 0.30 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
14 EBE-XVE +estradiol -0.41 >More info -0.57 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
15 ahg2-1sid2-2 0.57 >More info 0.38 >More info WT (Col) control Original data GEO bulk
16 2hr transitory KNO3 ECR cell 0.35 >More info 0.60 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
17 Daminozide 3 h 0.53 >More info 0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
18 bri1-116 0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
19 Laer pretreat GA Flg22 1h 0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
20 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
21 Prohexadione 3 h 0.54 >More info 0.34 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
22 WT roots - Fe 0.37 >More info 0.51 >More info WT roots + Fe Roots Original data GEO bulk
23 Drought Stress 24 h (shoot) 0.59 >More info 0.29 >More info Stress mock 24 h (shoot) Original data Stress treatments
24 Fe starvation 72 h 0.33 >More info 0.54 >More info Control Original data GEO bulk
25 whole roots -Fe 72 hour 0.33 >More info 0.54 >More info whole roots standard Original data GEO bulk
26 noa1-2 -0.68 >More info -0.18 >More info Col-0 whole seedlings Original data GEO bulk
27 Col-0 SA -0.64 >More info -0.22 >More info Col-0 Original data GEO bulk
28 WT 3h -P -0.57 >More info -0.29 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
29 AgNO3 3 h 0.56 >More info 0.29 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
30 Dark 4 h pls RedLight 1min -0.31 >More info -0.52 >More info Dark 4 h Original data Light treatments
31 root - 01% oxygen - 2h 0.69 >More info 0.14 >More info root - 21% oxygen - 2h Original data GEO bulk
32 IAA7mII over-expressor IAA Treated 0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
33 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold -0.26 >More info -0.56 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
34 3x(m) -0.31 >More info -0.51 >More info 2x two week old seedlings Original data
35 WT Root Hypoxia 0.58 >More info 0.24 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
36 SCR-GR Time 1H Dex 0.66 >More info 0.15 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
37 Root wt CLE10 0.56 >More info 0.25 >More info Root wt CLE25 root tip Original data GEO bulk
38 Full C2 T2 0.29 >More info 0.52 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
39 roots WT 0uM Fe 0.51 >More info 0.29 >More info roots WT 100uM Fe 0uM Fe roots Original data GEO bulk
40 php 0.51 >More info 0.29 >More info WT Original data GEO bulk
41 Col-0 wt Hypoxic 0.50 >More info 0.29 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
42 ahg2-1 0.55 >More info 0.23 >More info WT (Col) control Original data GEO bulk
43 24h volatiles Sp. HRO-C48 -0.55 >More info -0.23 >More info 24h untreated whole seedling Original data GEO bulk
44 21h-DC3000 avrRpm1 -0.53 >More info -0.25 >More info 21h-DC3000 leaves Original data GEO bulk
45 Chitosan 3h Treatment 0.58 >More info 0.20 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
46 IPT8 induced 24h -0.58 >More info -0.19 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
47 lec1-1 12 DAF Seed -0.54 >More info -0.22 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
48 2hr continuous KNO3 ECR cell 0.21 >More info 0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
49 rsa1 salt 12 h 0.51 >More info 0.24 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
50 Col BTH 0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
51 atmyc2 cop1 Seedling Dark -0.50 >More info -0.24 >More info WT Seedling Dark Original data GEO bulk
52 Aerobic prt6 0.64 >More info 0.10 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
53 Truncated AC2 T1 -0.57 >More info -0.17 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
54 PNO8 3 h 0.55 >More info 0.19 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
55 Starch sheath 2 days MS incubation -0.53 >More info -0.21 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
56 Root sol2 -0.58 >More info -0.15 >More info Root wt Original data GEO bulk
57 CBF3 100mM NaCl 0.64 >More info 0.09 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
58 AVG 3 h 0.60 >More info 0.13 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
59 dorn1-1 Root 100 mM ATP 30 min -0.55 >More info -0.17 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
60 CLV3n cells 0.67 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
61 SCR-GR Time 3H Dex 0.58 >More info 0.14 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
62 CLV3p cells 0.60 >More info 0.11 >More info Protoplast Induced Original data GEO bulk
63 9 hr Hypoxia Total RNA 0.57 >More info 0.14 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
64 Col0-PsmES4326-24hpi 0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
65 FILp cells 0.65 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
66 Col-0 WT HL 3h -0.59 >More info -0.11 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
67 sim smr1 -0.64 >More info -0.06 >More info WT seedling Original data GEO bulk
68 T101D 10mM NH4NO3 0.18 >More info 0.52 >More info col 10mM NH4NO3 Root Original data
69 micropylar endosperm pre-globular 0.67 >More info 0.02 >More info whole seed sections pre-globular Original data GEO bulk
70 Heat shock optimum 0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
71 IRP1-OE-Fe--root -0.60 >More info -0.09 >More info COL-0-Fe--root root Original data
72 scm -0.57 >More info -0.12 >More info Col Original data GEO bulk
73 sfr3 cold 0.18 >More info 0.51 >More info WT-cold aerial tissues Original data GEO bulk
74 sta1 0.19 >More info 0.50 >More info WT Original data GEO bulk
75 SCR-GR Time 6H Dex 0.56 >More info 0.12 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
76 Dark 40min pls UV-AB 5min -0.50 >More info -0.17 >More info Dark 45 min Original data Light treatments
77 SA 24h 0.51 >More info 0.15 >More info EtOH 24h 24hr Original data GEO bulk
78 Heat no recovery -0.69 >More info 0.03 >More info Mock no recovery seedling Original data GEO bulk
79 chalazal endosperm pre-globular 0.60 >More info 0.06 >More info whole seed sections pre-globular Original data GEO bulk
80 arr-BA-sample 0.55 >More info 0.10 >More info Wt-BA-sample seedling Original data
81 AFB1 flg22 2h 0.53 >More info 0.12 >More info WT 0h Leaf tissue Original data GEO bulk
82 Homozygous-AtcesA4 0.57 >More info 0.08 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
83 L2.5 mutant 0.71 >More info -0.07 >More info Wt Original data GEO bulk
84 mutant acs2B (single mutant) -0.57 >More info -0.07 >More info col control (single mutant) Original data GEO bulk
85 Full AC2 T1 -0.53 >More info -0.10 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
86 vtc2 (I) -0.68 >More info 0.05 >More info Col (I) rosette Original data GEO bulk
87 SPT4-R3 seedlings0 DAS -0.51 >More info -0.12 >More info Col-0 seedlings0 DAS seedlings Original data
88 lec2-1 8 DAF Seed -0.50 >More info -0.13 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
89 ppi2 -0.64 >More info 0.01 >More info WT whole plant Original data GEO bulk
90 abi4 vtc2 (I) -0.73 >More info 0.10 >More info Col (I) rosette Original data GEO bulk
91 sicy-192 gun1-101 cotyledons -0.64 >More info 0.01 >More info WT cotyledons cotyledons Original data
92 chl1-9 10mM NH4NO3 0.55 >More info 0.07 >More info col 10mM NH4NO3 Root Original data
93 dde2-2 9 hpi A. brassicicola 0.54 >More info 0.08 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
94 phosphate-starved 0.07 >More info 0.54 >More info control shoot tissue Original data GEO bulk
95 HDG4 -0.50 >More info -0.11 >More info Control for tissue data shoot apical meristem Original data GEO bulk
96 HMG -0.51 >More info -0.10 >More info Control for tissue data shoot apical meristem Original data GEO bulk
97 ANOXIA -0.11 >More info -0.50 >More info ANOXIA+SUCROSE Original data GEO bulk
98 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
99 arr10 arr12 tZ 0.50 >More info 0.10 >More info tZ trans-zeatin roots Original data GEO bulk
100 LAS -0.50 >More info -0.10 >More info Control for tissue data shoot apical meristem Original data GEO bulk
101 ERF115OE roottip5days 0.50 >More info 0.10 >More info Col-0 roottip5days root tips Original data
102 Atape2 low light -0.51 >More info -0.09 >More info Control for tissue data shoot apical meristem Original data GEO bulk
103 WT Shoot Hypoxia 0.52 >More info 0.08 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
104 abi4-102 (I) -0.66 >More info 0.07 >More info Col (I) rosette Original data GEO bulk
105 rosette leaves lcr -0.50 >More info -0.09 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
106 DMTU 0.51 >More info 0.07 >More info control Original data GEO bulk
107 cov1 cov2 stem Top -0.69 >More info 0.11 >More info WT stem Top stem Top Original data GEO bulk
108 csn4-1 mutant -0.52 >More info -0.05 >More info WT dark Original data GEO bulk
109 Brassinolide 0.5 h (det2) 0.50 >More info 0.07 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
110 rosette leaves bdg -0.54 >More info -0.03 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
111 ARR22-ox (t-zeatin 3 h) 0.51 >More info 0.06 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
112 Leaf GLU1-KO -0.57 >More info 0.00 >More info Leaf Col(0) rosette leaves Original data GEO bulk
113 AtMYB30-ox T0 -0.61 >More info 0.04 >More info WT T0 Original data GEO bulk
114 WT 2-4h Xanthomonas -0.55 >More info -0.01 >More info WT T0 Original data GEO bulk
115 aba1 hypocotyl -0.50 >More info -0.06 >More info Ler hypocotyl hypocotyl Original data GEO bulk
116 root callus inducing medium 96 h -0.57 >More info 0.01 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
117 Kas -Fe 48h Shoots 0.51 >More info 0.04 >More info Kas +Fe 24h Shoots Original data GEO bulk
118 sicy-192 cotyledons -0.72 >More info 0.17 >More info WT cotyledons cotyledons Original data
119 9 hr Hypoxia IP RNA 0.56 >More info -0.03 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
120 camta2/3 warm -0.62 >More info 0.10 >More info WT warm entire aerial part Original data GEO bulk
121 WT 1wk -P -0.52 >More info -0.00 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
122 aox1a:rpoTmp untreated -0.62 >More info 0.10 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
123 cat2-short-day 2d 0.62 >More info -0.10 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
124 roots bhlh100/101 0uM Fe 0.57 >More info -0.06 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
125 root cells stele 140mM NaCl 1 hour -0.50 >More info -0.01 >More info root cells stele standard 1 hour root cells stele Original data
126 nia1nia2noa1-2 -0.57 >More info 0.06 >More info Col-0 whole seedlings Original data GEO bulk
127 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
128 ga1-3 SCL3OE 0.51 >More info -0.01 >More info ga1-3 whole root Original data
129 A6 mutant -0.50 >More info 0.01 >More info WT rosette leaves Rosette leaves Original data GEO bulk
130 Mutant lwd1_lwd2 -0.52 >More info 0.04 >More info Wildtype for phy mutants Original data GEO bulk
131 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.52 >More info 0.04 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
132 prt6-1 0.50 >More info -0.02 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
133 root cells cortex 140mM NaCl 32 hours -0.50 >More info 0.02 >More info root cells cortex standard 1 hour root cells cortex Original data
134 15m light -0.52 >More info 0.05 >More info before light whole seedlings Original data GEO bulk
135 ACN1-2 0.65 >More info -0.19 >More info col-7 Original data GEO bulk
136 6xX2x interploidy cross 0.54 >More info -0.09 >More info 2xX2x cross Original data GEO bulk
137 Cd 24h root 0.53 >More info -0.08 >More info WT-Untreated Shoot Original data GEO bulk
138 protoplasts T1 [flg22] -0.55 >More info 0.11 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
139 OE WRKY40.4 -0.50 >More info 0.06 >More info OE WRKY40.4 none leaf Original data GEO bulk
140 Inflorescence miR-NGA -0.60 >More info 0.16 >More info Inflorescence wt Original data GEO bulk
141 Anoxia 0.52 >More info -0.09 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
142 0h hml -0.22 >More info 0.65 >More info 0h wt Original data
143 estradiole-induced ANAC092 -0.52 >More info 0.10 >More info transgenic (empty vector inducible system) Original data GEO bulk
144 Hypoxic prt6 0.50 >More info -0.08 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
145 csn3-1 light -0.51 >More info 0.13 >More info WT light Original data GEO bulk
146 Norflurazon -0.54 >More info 0.19 >More info Col-0 Original data GEO bulk
147 Norflurazon -0.54 >More info 0.19 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
148 Infected pft1 leaf 0.53 >More info -0.19 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
149 Elevated CO2 LIMITING N DAY 0.51 >More info -0.18 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
150 Mutant bri1 0.52 >More info -0.24 >More info Ws-2 Original data Comparison of plant hormone related mutant
151 seed germinating in countinuous light 24h SL -0.40 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
152 Stigma -0.51 >More info 0.28 >More info Seedling Original data GEO bulk
153 Shoot apex inflorescence (after bolting) -0.51 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
154 12h volatiles Sm. R3089 -0.52 >More info 0.40 >More info 12h untreated whole seedling Original data GEO bulk
155 Chemically -0.60 >More info 0.58 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data