bri1-116

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on bri1-116

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List of experiments correlated with "bri1-116"

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Score	Experiment	Correlation from bri1-116	Correlation to bri1-116	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	bri1-116	1.00 >More info	1.00 >More info	Col		seedling	Original data	GEO bulk
2	Dark 4 h pls RedLight 1min	0.73 >More info	0.73 >More info	Dark 4 h			Original data	Light treatments
3	Laer pretreat GA Flg22 1h	0.73 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
4	IAA7mII over-expressor IAA Treated	0.73 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
5	cop1 Seedling Dark	0.73 >More info	0.68 >More info	WT Seedling Dark			Original data	GEO bulk
6	Col BTH	0.73 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
7	seed germinating in countinuous light 24h SL	0.73 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
8	axr2-BR	0.73 >More info	0.66 >More info	BR	BR	dark-grown seedlings	Original data	GEO bulk
9	Elevated CO2 LIMITING N DAY	0.73 >More info	0.65 >More info	Elevated CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
10	WT light	0.73 >More info	0.65 >More info	WT dark			Original data	GEO bulk
11	arf2 brz	0.73 >More info	0.65 >More info	arf2 mock			Original data	GEO bulk
12	Heat shock optimum	0.73 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
13	Shoot apex inflorescence (after bolting)	0.73 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
14	axr2	0.73 >More info	0.64 >More info	WT-mock	mock	dark-grown seedlings	Original data	GEO bulk
15	Col BRZ	0.73 >More info	0.64 >More info	Col mock			Original data	GEO bulk
16	FarRed Light 4 h	0.73 >More info	0.64 >More info	White Light 4 h			Original data	Light treatments
17	Dark 4 h pls UV-A 5 min	0.73 >More info	0.64 >More info	Dark 4 h			Original data	Light treatments
18	AtGATA2ox	0.73 >More info	0.63 >More info	Col		seedling	Original data	GEO bulk
19	WT Seedling BL	0.73 >More info	0.61 >More info	WT Seedling Dark			Original data	GEO bulk
20	Col0-PsmES4326-24hpi	0.73 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
21	Blue Light 4 h	0.73 >More info	0.61 >More info	White Light 4 h			Original data	Light treatments
22	atmyc2 cop1 Seedling Dark	0.73 >More info	0.60 >More info	WT Seedling Dark			Original data	GEO bulk
23	etiolated cop1BBX22-GFPox	0.73 >More info	0.60 >More info	etiolated Col-0		whole seedlings	Original data	GEO bulk
24	WT(Ler) Rc50	0.73 >More info	0.57 >More info	WT(Ler) Dark			Original data	GEO bulk
25	Leafminer damaged seedlings	0.73 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
26	vtc1-1	0.73 >More info	0.56 >More info	Col-0		whole plant	Original data	GEO bulk
27	WT Rc50	0.73 >More info	0.56 >More info	WT Dark	red light	whole seedling	Original data	GEO bulk
28	WT(Ler) Rc15	0.73 >More info	0.55 >More info	WT(Ler) Dark			Original data	GEO bulk
29	phyB Dark	0.73 >More info	0.55 >More info	WT(Ler) Dark			Original data	GEO bulk
30	Propiconazole 12 h	0.73 >More info	0.54 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
31	pif3 Dark 0h	0.73 >More info	0.54 >More info	WT Dark 0h		etiolated seedling	Original data	GEO bulk
32	afb3-1 2h KNO3	0.73 >More info	0.53 >More info	Ws 2h KNO3	2 hours of 5 mM KNO3	Arabidopsis root	Original data	GEO bulk
33	csn5 (csn5a-2 csn5b) dark	0.73 >More info	0.52 >More info	WT dark			Original data	GEO bulk
34	root hypoxia pGL2	0.73 >More info	0.52 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
35	siliques AtHb1 control	0.73 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
36	WT Root Hypoxia	0.73 >More info	0.52 >More info	WT Root Normoxia (mock)	Hypoxia	Root	Original data	GEO bulk
37	phr1 Shoot-Pi	0.73 >More info	0.51 >More info	WT Root-Pi		shoots	Original data	GEO bulk
38	CCA1-ox 6am non-polysomal	0.73 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
39	sav3-2 light	0.73 >More info	0.51 >More info	Col-0 light		seedlings	Original data	GEO bulk
40	Paclobutrazol 12 h	0.73 >More info	0.51 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
41	Mutant sav3-2 (WL)	0.73 >More info	0.51 >More info	Col-0 (WL)			Original data	GEO bulk
42	gun1gun5 Norflurazon	0.73 >More info	0.50 >More info	Norflurazon	a herbicide (Norflurazon)	seedling	Original data	GEO bulk
43	Ler KAR1 24h seed	0.73 >More info	0.49 >More info	Ler WATER 24h seed	KAR1	seed	Original data	GEO bulk
44	L2.4 mutant	0.73 >More info	0.49 >More info	Wt			Original data	GEO bulk
45	Uniconazole 12 h	0.73 >More info	0.49 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
46	csn3-1 dark	0.73 >More info	0.49 >More info	WT dark			Original data	GEO bulk
47	pif3 Dark 1h	0.73 >More info	0.48 >More info	WT Dark 1h		etiolated seedling	Original data	GEO bulk
48	ARR22-ox	0.73 >More info	0.48 >More info	Col-0			Original data	Cytokinin treatment of seedlings
49	efr-1 +elf18 10h	0.73 >More info	0.48 >More info	WT +elf18 10h	elf18		Original data	GEO bulk
50	ckh2 CK25	0.73 >More info	0.47 >More info	WT (Ler) CK25	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
51	WT Red light 18h	0.73 >More info	0.47 >More info	WT Dark 18h		deetiolated seedling	Original data	GEO bulk
52	sav3-2 shade	0.73 >More info	0.47 >More info	Col-0 shade		seedlings	Original data	GEO bulk
53	Mutant sav3-2 (SH)	0.73 >More info	0.47 >More info	Col-0 (SH)			Original data	GEO bulk
54	ANOXIA	0.73 >More info	0.47 >More info	ANOXIA+SUCROSE			Original data	GEO bulk
55	gun1-1 +lincomycin	0.73 >More info	0.46 >More info	Col-0 +lincomycin			Original data	GEO bulk
56	0.5h light (+Lincomycin)	0.73 >More info	0.45 >More info	0.5h light (-Lincomycin)		seedlings	Original data	GEO bulk
57	2d dark-grown pif1pif3pif4pif5 (pifq) mutant	0.73 >More info	0.45 >More info	2d dark-grown WT seedling			Original data	GEO bulk
58	MPK6 ox Root Hypoxia	0.73 >More info	0.45 >More info	WT Root Normoxia (mock)	Hypoxia	Root	Original data	GEO bulk
59	Col-0 Root 100 mM ATP 30 min	0.73 >More info	0.44 >More info	Col-0 Root MES buffer 30 min		Roots of 5 day-old seedlings	Original data
60	Light 4h polysome-bound	0.73 >More info	0.44 >More info	Dark polysome-bound	white light	seedlings (aerial parts)	Original data	GEO bulk
61	Mutant arf2-6 (IAA)	0.73 >More info	0.44 >More info	Col (IAA)			Original data	GEO bulk
62	24h volatiles Sp. HRO-C48	0.73 >More info	0.44 >More info	24h untreated		whole seedling	Original data	GEO bulk
63	csn4-1 mutant	0.73 >More info	0.44 >More info	WT dark			Original data	GEO bulk
64	OXUPB1-2 meristematic zone	0.73 >More info	0.44 >More info	Col-0 meristematic zone		Seedling root meristem zone	Original data	GEO bulk
65	toc1-1-73hr	0.73 >More info	0.44 >More info	WT-untreated-73hr	none	seedlings aerial tissue	Original data	GEO bulk
66	10min Reillumination IP RNA	0.73 >More info	0.44 >More info	1h Dark IP RNA	1 h darkness plus 10 min reillumination	whole seedlings	Original data	GEO bulk
67	amiRAP hypoxic	0.73 >More info	0.44 >More info	hypoxic	hypoxia		Original data	GEO bulk
68	SCR 96hr-S	0.73 >More info	0.44 >More info	SCR 0hr		endodermis	Original data
69	2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr red light	0.73 >More info	0.43 >More info	2d dark-grown WT(Col-0)/1 hr red light			Original data	GEO bulk
70	agb1 gpa1 +ABA GC	0.73 >More info	0.43 >More info	Col-0 +ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
71	myb3 myb3r4d	0.73 >More info	0.43 >More info	Wild type Col0-9d		whole seedlings	Original data	GEO bulk
72	anac017-1 H2O2 3h	0.73 >More info	0.42 >More info	WT H2O2 3h	3h_H2O2		Original data	GEO bulk
73	Mutant arf2-6	0.73 >More info	0.42 >More info	Col			Original data	GEO bulk
74	pXVE:HA-EDM2-a untreated	0.73 >More info	0.42 >More info	Col-0 untreated		seedlings	Original data	GEO bulk
75	rao2 H2O2 3h	0.73 >More info	0.42 >More info	WT H2O2 3h	3h_H2O2		Original data	GEO bulk
76	sfr3 warm	0.73 >More info	0.42 >More info	WT-warm		aerial tissues	Original data	GEO bulk
77	root longitudinal zone-4 pH 4.6	0.73 >More info	0.42 >More info	root longitudinal zone-4 pH 5.7			Original data	GEO bulk
78	GR-bdl DEX IAA	0.73 >More info	0.42 >More info	GR-bdl IAA			Original data	GEO bulk
79	entire vegetative rosette	0.73 >More info	0.41 >More info	Col-0 Mock WL		entire vegetative rosette	Original data
80	Mutant bri1	0.73 >More info	0.41 >More info	Ws-2			Original data	Comparison of plant hormone related mutant
81	Dex-rga(delta17) 4h GA4	0.73 >More info	0.40 >More info	Vector 4h GA4		shoots	Original data	GEO bulk
82	arr-BA-sample	0.73 >More info	0.40 >More info	Wt-BA-sample		seedling	Original data
83	line J1551-5 days control + 2 days salt s	0.73 >More info	0.40 >More info	line J1551-7 days-control			Original data
84	gpa1 -ABA GC	0.73 >More info	0.40 >More info	Col-0 -ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
85	toc1-1-85hr	0.73 >More info	0.40 >More info	WT-untreated-85hr	none	seedlings aerial tissue	Original data	GEO bulk
86	pif4pif5 mut 24h FR	0.73 >More info	0.40 >More info	WT 24h FR			Original data	GEO bulk
87	root - 04% oxygen - 2h	0.73 >More info	0.40 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
88	bri1-5 mutant	0.73 >More info	0.39 >More info	WT		7 day-old whole seedlings	Original data
89	Light 4h steady-state	0.73 >More info	0.39 >More info	Dark steady-state	white light	seedlings (aerial parts)	Original data	GEO bulk
90	iron minus 24h	0.73 >More info	0.39 >More info	iron +24h		root	Original data	GEO bulk
91	Laer Flg22(Agrobacterium) 2h	0.73 >More info	0.39 >More info	Laer Control		leaf discs	Original data	GEO bulk
92	miR393 0h	0.73 >More info	0.39 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
93	seedlings + TSA	0.73 >More info	0.39 >More info	control seedlings		10-day old whole seedling	Original data	GEO bulk
94	pif4pif5 mut 1h FR	0.73 >More info	0.38 >More info	WT 1h FR			Original data	GEO bulk
95	fis1X2x fis1 mutant cross	0.73 >More info	0.38 >More info	2xX2x cross			Original data	GEO bulk
96	root - 04% oxygen - 30min	0.73 >More info	0.38 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
97	TAMM27 roots 2hr KNO3 nitrogen	0.73 >More info	0.38 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
98	SCR 72hr-S	0.73 >More info	0.38 >More info	SCR 0hr		endodermis	Original data
99	wnk8-2 untreated	0.73 >More info	0.38 >More info	Col-0 untreated		seedlings	Original data	GEO bulk
100	WT (Ler) CK25	0.73 >More info	0.38 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
101	amiRAP aerobic	0.73 >More info	0.37 >More info	WT aerobic	aerobic		Original data	GEO bulk
102	Whole root - low pH 48H	0.73 >More info	0.37 >More info	Whole root - Std pH 48H	pH 4.6 for 48 hr		Original data	GEO bulk
103	sps1	0.73 >More info	0.37 >More info	WT		seedling	Original data	GEO bulk
104	35S:RPS4 rrs1-11 8h	0.73 >More info	0.37 >More info	35S:RPS4 8h		leaves	Original data
105	35S:RPS4 eds1-2 8h	0.73 >More info	0.37 >More info	35S:RPS4 8h		leaves	Original data
106	root - 01% oxygen - 30min	0.73 >More info	0.37 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
107	ckh2 CK0	0.73 >More info	0.36 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin.	tissue culture	Original data	GEO bulk
108	eds16 whole leaf 5dpi	0.73 >More info	0.36 >More info	Col whole leaf 5dpi		whole leaf	Original data	GEO bulk
109	root - 01% oxygen - 2h	0.73 >More info	0.36 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
110	TAMM27 roots 2hr KCl control	0.73 >More info	0.36 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
111	root cortex pH4.6	0.73 >More info	0.36 >More info	root cortex pH5.7			Original data	GEO bulk
112	phyABDE Rc50	0.73 >More info	0.36 >More info	phyABDE Dark	red light	whole seedling	Original data	GEO bulk
113	dsr1	0.73 >More info	0.36 >More info	WT mock		Whole seedling	Original data	GEO bulk
114	MPK6 ox Shoot Hypoxia	0.73 >More info	0.36 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
115	BR	0.73 >More info	0.36 >More info	WT-mock	BR	dark-grown seedlings	Original data	GEO bulk
116	root hypoxia pSUC2	0.73 >More info	0.35 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
117	rrd1 IBA	0.73 >More info	0.35 >More info	wild type IBA	12h 0.5 mg/L IBA	cultured explant	Original data	GEO bulk
118	nd-1 mock 48 hpi	0.73 >More info	0.35 >More info	Col-0 mock 48 hpi		Pool of >50 individual roots	Original data
119	msg2-BR	0.73 >More info	0.35 >More info	BR	BR	dark-grown seedlings	Original data	GEO bulk
120	ein2	0.73 >More info	0.35 >More info	Col-0		Leaves	Original data	GEO bulk
121	anac017-2 AntimycinA 3h	0.73 >More info	0.35 >More info	WT AntimycinA 3h	3h_AntimycinA		Original data	GEO bulk
122	6m.KCl	0.73 >More info	0.35 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
123	DUO1 induced 6h	0.73 >More info	0.35 >More info	6hr-not-induced		whole plant	Original data	GEO bulk
124	bio4-1 mutant watered00µM biotin leaves	0.73 >More info	0.35 >More info	bio4-1 mutant leaves		leaves	Original data	GEO bulk
125	WT +Pep2 2h	0.73 >More info	0.35 >More info	WT untreated	Pep2		Original data	GEO bulk
126	chalazal seed coat heart stage	0.73 >More info	0.35 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
127	cop1 Seedling BL	0.73 >More info	0.35 >More info	WT Seedling BL			Original data	GEO bulk
128	root control pGL2	0.73 >More info	0.35 >More info	root control total	control	root	Original data	GEO bulk
129	root stele -S	0.73 >More info	0.35 >More info	root stele pH5.7			Original data	GEO bulk
130	wnk8-1 untreated	0.73 >More info	0.35 >More info	Col-0 untreated		seedlings	Original data	GEO bulk
131	ckh2 CK200	0.73 >More info	0.34 >More info	WT (Ler) CK200	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
132	SCR 24hr-S	0.73 >More info	0.34 >More info	SCR 0hr		endodermis	Original data
133	root cells epidermis 140mM NaCl 1 hour	0.73 >More info	0.34 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
134	MG132 3 h	0.73 >More info	0.34 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
135	root control pSultr2:2	0.73 >More info	0.34 >More info	root control total	control	root	Original data	GEO bulk
136	DUO1 induced 12h	0.73 >More info	0.34 >More info	12hr-not-induced		whole plant	Original data	GEO bulk
137	root control pSUC2	0.73 >More info	0.34 >More info	root control total	control	root	Original data	GEO bulk
138	ckh1 CK0	0.73 >More info	0.33 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin.	tissue culture	Original data	GEO bulk
139	Light 0.5h polysome-bound	0.73 >More info	0.33 >More info	Dark polysome-bound	white light	seedlings (aerial parts)	Original data	GEO bulk
140	high R/FR	0.73 >More info	0.33 >More info	low R/FR	high R/FR (control) mock spray		Original data	GEO bulk
141	SCR 48hr-S	0.73 >More info	0.33 >More info	SCR 0hr		endodermis	Original data
142	ms35 silique stage 7	0.73 >More info	0.33 >More info	Ler 6.7		anther and filament	Original data	GEO bulk
143	Mutant coi1(leaf)	0.73 >More info	0.33 >More info	Col-0 (leaf)			Original data	GEO bulk
144	sfr6 cold	0.73 >More info	0.33 >More info	WT cold		All aerial tissue	Original data	GEO bulk
145	glk1 glk2 GLK1-GR +DEX 4h	0.73 >More info	0.33 >More info	glk1 glk2 GLK1-GR mock 4h	dexamethasone	whole seedlings	Original data	GEO bulk
146	CeO2 germinant	0.73 >More info	0.33 >More info	Millipore Water germinant	CeO2	seedling	Original data
147	root endodermis and quiescent center 40 mM NaCl	0.73 >More info	0.33 >More info	root endodermis and quiescent center			Original data	GEO bulk
148	sfr2 cold	0.73 >More info	0.33 >More info	WT cold		All aerial tissue	Original data	GEO bulk
149	GiantCell Root	0.73 >More info	0.33 >More info	Control Root		laser captured giant cells	Original data	GEO bulk
150	AFB1 0h	0.73 >More info	0.32 >More info	Col 0h		Leaf	Original data	GEO bulk
151	PBZ	0.73 >More info	0.32 >More info	none	PBZ	Rosette	Original data	GEO bulk
152	35S:RPS4 eds1-2 2h	0.73 >More info	0.32 >More info	35S:RPS4 2h		leaves	Original data
153	endosperm paclobutrazol	0.73 >More info	0.32 >More info	endosperm-control	paclobutrazol	endosperm	Original data	GEO bulk
154	root cells epidermis 140mM NaCl 20 hours	0.73 >More info	0.32 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
155	agb1 gpa1 -ABA GC	0.73 >More info	0.32 >More info	Col-0 -ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
156	Root submergence 24h	0.73 >More info	0.32 >More info	Root light control	24 h submergence in darkness	whole root	Original data	GEO bulk
157	Root GLU1-KO	0.73 >More info	0.32 >More info	Root Col(0)		roots	Original data	GEO bulk
158	Paclobutrazol 3 h	0.73 >More info	0.32 >More info	Mock 3 h			Original data	Effect of GA inhibitors on seedlings
159	pmr5	0.73 >More info	0.32 >More info	Col-0		rosette	Original data	GEO bulk
160	gapcp1gapcp2	0.73 >More info	0.31 >More info	WT			Original data	GEO bulk
161	WT Uniconazole	0.73 >More info	0.31 >More info	WT mock			Original data	GEO bulk
162	gai MeJA 1h	0.73 >More info	0.31 >More info	Laer MeJA 1h		leaf discs	Original data	GEO bulk
163	Dex-rga(delta17) 4h GA4+DEX	0.73 >More info	0.31 >More info	Vector 4h GA4+DEX		shoots	Original data	GEO bulk
164	GR-REV 30min	0.73 >More info	0.31 >More info	Col 30min			Original data	GEO bulk
165	sav1-1 light	0.73 >More info	0.31 >More info	Col-0 light		seedlings	Original data	GEO bulk
166	rsa1 salt 12 h	0.73 >More info	0.31 >More info	WT salt 12 h	Salt with 120 mM NaCl for 24 h	seedlings	Original data	GEO bulk
167	pkl Mutant Uniconazole	0.73 >More info	0.31 >More info	pkl Mutant mock			Original data	GEO bulk
168	21h-DC3000 avrRpm1	0.73 >More info	0.31 >More info	21h-DC3000		leaves	Original data	GEO bulk
169	TaFLS overexpression line (OE1)	0.73 >More info	0.31 >More info	Col-0		Rosette leaves	Original data
170	WT 1mM phosphate 8 hours.	0.73 >More info	0.31 >More info	WT control (not supplemented).			Original data
171	GR-REV 60min	0.73 >More info	0.31 >More info	Col 60min			Original data	GEO bulk
172	Light 0.5h steady-state	0.73 >More info	0.31 >More info	Dark steady-state	white light	seedlings (aerial parts)	Original data	GEO bulk
173	root control pCO2	0.73 >More info	0.31 >More info	root control total	control	root	Original data	GEO bulk
174	dicamba	0.73 >More info	0.31 >More info	WT mock		whole seedling	Original data	GEO bulk
175	phyB mutant 22C 4hrs	0.73 >More info	0.30 >More info	L22-4hrs		whole plant excluding roots	Original data	GEO bulk
176	line J2731-5 days control + 2 days salt s	0.73 >More info	0.30 >More info	line J2731-7 days-control			Original data
177	GiantCell Root	0.73 >More info	0.30 >More info	Control Root		laser captured giant cells	Original data	GEO bulk
178	LTN005-2 TSA	0.73 >More info	0.30 >More info	LTN012-2 Mock			Original data
179	bZIP1ko mutant N-Light-	0.73 >More info	0.30 >More info	WT-sib N-Light-		whole plant	Original data	GEO bulk
180	phyB Rc50	0.73 >More info	0.30 >More info	WT(Ler) Rc50			Original data	GEO bulk
181	rsa1 salt 0 h	0.73 >More info	0.30 >More info	WT salt 0 h	Control	seedlings	Original data	GEO bulk
182	root longitudinal zone-1 pH 4.6	0.73 >More info	0.30 >More info	root longitudinal zone-1 pH 5.7			Original data	GEO bulk
183	Mutant axr3-1	0.73 >More info	0.30 >More info	Col			Original data	GEO bulk
184	Root dark control 24h	0.73 >More info	0.30 >More info	Root light control	non-submerged dark condition for 24 hours	whole root	Original data	GEO bulk
185	ddm1-2 rdr6-15	0.73 >More info	0.30 >More info	Col-0		plant inflorescence	Original data
186	root cells epidermis 140mM NaCl 3 hours	0.73 >More info	0.30 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
187	SHR-GR Time 12H Dex	0.73 >More info	0.30 >More info	SHR-GR Time 0H Dex	Dex media for 12 hours		Original data	GEO bulk
188	Laer GA 2h	0.73 >More info	0.30 >More info	Laer Control		leaf discs	Original data	GEO bulk
189	mp-B4149 mutant IAA	0.73 >More info	0.30 >More info	GR-bdl IAA			Original data	GEO bulk
190	root cells epidermis 140mM NaCl 8 hours	0.73 >More info	0.29 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
191	shoot control pKAT1	0.73 >More info	0.29 >More info	shoot control total			Original data	GEO bulk
192	DUO1 induced 24h	0.73 >More info	0.29 >More info	24hr-not-induced		whole plant	Original data	GEO bulk
193	AtLysM RLK1 mutant water	0.73 >More info	0.29 >More info	WT water			Original data	GEO bulk
194	toc1-1-77hr	0.73 >More info	0.29 >More info	WT-untreated-77hr	none	seedlings aerial tissue	Original data	GEO bulk
195	tunicamycin	0.73 >More info	0.29 >More info	DMF			Original data	GEO bulk
196	Brassinolide 0.5 h (det2)	0.73 >More info	0.29 >More info	Mock 0.5 h (det2)			Original data	Basic hormone treatment of seedlings
197	AsAKiin11 T3	0.73 >More info	0.29 >More info	C2 C2del and (As)AKiin11 control T3	three days post infusion with Agrobacterium containing antisense (As)AKiin11	Arabidopsis rosette leaves	Original data
198	root control pSHR	0.73 >More info	0.29 >More info	root control total	control	root	Original data	GEO bulk
199	toc1-1-89hr	0.73 >More info	0.29 >More info	WT-untreated-89hr	none	seedlings aerial tissue	Original data	GEO bulk
200	ALC Toc1 light-light EtOH	0.73 >More info	0.29 >More info	Col light-light EtOH	2.5% ethanol		Original data	GEO bulk
201	Col-0 35S:MBS1 HL 0h	0.73 >More info	0.29 >More info	Col-0 WT HL 0h	without high light treatment	whole seedlings without root	Original data
202	root cells columella root cap -Fe	0.73 >More info	0.29 >More info	whole roots standard			Original data	GEO bulk
203	msg2	0.73 >More info	0.29 >More info	WT-mock	mock	dark-grown seedlings	Original data	GEO bulk
204	toc1-1-81hr	0.73 >More info	0.29 >More info	WT-untreated-81hr	none	seedlings aerial tissue	Original data	GEO bulk
205	Dark 4 h pls UV-AB 5min	0.73 >More info	0.29 >More info	Dark 4 h			Original data	Light treatments
206	pepr1-1 Pepr2-3 untreated	0.73 >More info	0.29 >More info	WT untreated	untreated		Original data	GEO bulk
207	cov1 cov2 stem Top	0.73 >More info	0.29 >More info	WT stem Top		stem Top	Original data	GEO bulk
208	triploid female excess	0.73 >More info	0.29 >More info	tetraploid			Original data	GEO bulk
209	1 h Light IP RNA	0.73 >More info	0.28 >More info	1h Dark IP RNA	1 h light control	whole seedlings	Original data	GEO bulk
210	bak1-3 untreated	0.73 >More info	0.28 >More info	WT untreated	untreated		Original data	GEO bulk
211	ALC Toc1 light-light Mock	0.73 >More info	0.28 >More info	Col light-light Mock	no ethanol		Original data	GEO bulk
212	rao2 AntimycinA 3h	0.73 >More info	0.28 >More info	WT AntimycinA 3h	3h_AntimycinA		Original data	GEO bulk
213	nas4x roots - Fe	0.73 >More info	0.28 >More info	WT roots - Fe		Roots	Original data	GEO bulk
214	pad4-PsmES4326-24hpi	0.73 >More info	0.28 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
215	Truncated AC2 T2	0.73 >More info	0.28 >More info	AC2 and AC2del control T2	two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2	Arabidopsis rosette leaves	Original data
216	sfr3 cold	0.73 >More info	0.28 >More info	WT-cold		aerial tissues	Original data	GEO bulk
217	root cells endodermis 140mM NaCl 1 hour	0.73 >More info	0.28 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
218	HARAP aerobic	0.73 >More info	0.28 >More info	WT aerobic	aerobic		Original data	GEO bulk
219	cs26 short-day	0.73 >More info	0.28 >More info	Leaves-WT-SD		leaf	Original data	GEO bulk
220	35S::HRE2 Hypoxic	0.73 >More info	0.28 >More info	Col-0 wt Hypoxic	hypoxic treatment		Original data	GEO bulk
221	root cells epidermis 140mM NaCl 48 hours	0.73 >More info	0.28 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
222	ein3-1eil1-1 dark	0.73 >More info	0.28 >More info	Wt dark		whole 4-day old etiolated seedlings	Original data	GEO bulk
223	OsSAP11 expressing	0.73 >More info	0.28 >More info	WT		seedlings	Original data	GEO bulk
224	xyl-grown cell culture- 1h 1mM Suc	0.73 >More info	0.28 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
225	Split KNO3 roots - 2hours	0.73 >More info	0.27 >More info	Split KCl roots - 2hours	5mM KNO3 on ONE side for 2 hours	roots	Original data	GEO bulk
226	spx1 spx2 no Pi	0.73 >More info	0.27 >More info	WT no Pi		seedlings	Original data
227	ago1-27	0.73 >More info	0.27 >More info	Col-0		vegetative apex	Original data	GEO bulk
228	Col-0 35S:MBS1 HL 3h	0.73 >More info	0.27 >More info	Col-0 WT HL 3h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
229	stn7-1	0.73 >More info	0.27 >More info	Col-0		rosette leaves	Original data	GEO bulk
230	Imbibed 24 h ABA 3uM (seed)	0.73 >More info	0.27 >More info	Imbibed 24 h (seed)			Original data	Effect of ABA during seed imbibition
231	Dex-rga(delta17) 2h GA4+DEX	0.73 >More info	0.27 >More info	Vector 4h GA4+DEX		shoots	Original data	GEO bulk
232	P35S:rGRF1	0.73 >More info	0.27 >More info	Col-0			Original data	GEO bulk
233	long 8-degree-	0.73 >More info	0.27 >More info	control long			Original data	GEO bulk
234	AtLysM RLK1 mutant chitooctaose	0.73 >More info	0.27 >More info	WT chitooctaose			Original data	GEO bulk
235	Col leaves 120h LT	0.73 >More info	0.27 >More info	Col leaves 0h LT	12h	9-11th adult leaves	Original data
236	tbf1-elf18	0.73 >More info	0.27 >More info	WT-elf18	10 µM elf18 for 2 hrs (infiltration into leaves)	mature leaf	Original data	GEO bulk
237	aphid infested	0.73 >More info	0.27 >More info	control	aphid infested	Leaves	Original data	GEO bulk
238	2xX6x interploidy cross	0.73 >More info	0.27 >More info	2xX2x cross			Original data	GEO bulk
239	1h +Pi	0.73 >More info	0.27 >More info	1h -Pi		root	Original data	GEO bulk
240	eds16 whole leaf 0h UI	0.73 >More info	0.27 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
241	IAA 12h	0.73 >More info	0.27 >More info	control 12h		root	Original data	GEO bulk
242	anac017-1 AntimycinA 3h	0.73 >More info	0.27 >More info	WT AntimycinA 3h	3h_AntimycinA		Original data	GEO bulk
243	6m.KNO3	0.73 >More info	0.27 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
244	eds16 whole leaf 7dpi	0.73 >More info	0.27 >More info	Col whole leaf 7dpi		whole leaf	Original data	GEO bulk
245	aphid infested	0.73 >More info	0.27 >More info	CTR			Original data	GEO bulk
246	sfr2 control	0.73 >More info	0.27 >More info	WT control		All aerial tissue	Original data	GEO bulk
247	F1 hybrid submerged	0.73 >More info	0.26 >More info	F1 hybrid air			Original data	GEO bulk
248	phyABDE Dark	0.73 >More info	0.26 >More info	WT Dark	Dark	whole seedling	Original data	GEO bulk
249	roottip hypoxia pSCR	0.73 >More info	0.26 >More info	roottip hypoxia total	hypoxia	roottip	Original data	GEO bulk
250	root hypoxia pSHR	0.73 >More info	0.26 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
251	root cells cortex -Fe	0.73 >More info	0.26 >More info	whole roots standard			Original data	GEO bulk
252	red illumination +lincomycin	0.73 >More info	0.26 >More info	red illumination -lincomycin			Original data	GEO bulk
253	pif4pif5 mut dark	0.73 >More info	0.26 >More info	WT dark			Original data	GEO bulk
254	2hr continuous KNO3 and MSX and Gln PeR cell	0.73 >More info	0.26 >More info	2hr continuous KCl and MSX control PeR cell		Pericycle root cells	Original data	GEO bulk
255	root - 04% oxygen - 48h	0.73 >More info	0.26 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
256	Propiconazole 3 h	0.73 >More info	0.26 >More info	Mock 3 h			Original data	Effect of GA inhibitors on seedlings
257	Dex-rga(delta17) 2h GA4	0.73 >More info	0.26 >More info	Vector 4h GA4		shoots	Original data	GEO bulk
258	gpa1 +ABA GC	0.73 >More info	0.26 >More info	Col-0 +ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
259	ani1 T0.5	0.73 >More info	0.25 >More info	WT T0.5		root tissue	Original data	GEO bulk
260	IAA 8h	0.73 >More info	0.25 >More info	control 8h		root	Original data	GEO bulk
261	root cells epidermis 140mM NaCl 32 hours	0.73 >More info	0.25 >More info	root cells epidermis standard 1 hour		root cells epidermis	Original data
262	pGL1::GL1-GR Dex 4 hours	0.73 >More info	0.25 >More info	pGL1::GL1-GR mock 4 hours			Original data	GEO bulk
263	overexpresser LBD38 in -N	0.73 >More info	0.25 >More info	WT in -N	nitrogen depletion	whole seedling	Original data	GEO bulk
264	Root dark control 7h	0.73 >More info	0.25 >More info	Root light control	non-submerged dark condition for 7 hours	whole root	Original data	GEO bulk
265	dTLEc control	0.73 >More info	0.25 >More info	wt control		leaves	Original data	GEO bulk
266	npr1-1 water	0.73 >More info	0.25 >More info	Col-0 water		complete seedling	Original data
267	R. amphibia submerged	0.73 >More info	0.25 >More info	R. amphibia air			Original data	GEO bulk
268	gun1gun5 far-red pretreated	0.73 >More info	0.25 >More info	WT far-red pretreated			Original data	GEO bulk
269	gai Flg22 2h	0.73 >More info	0.25 >More info	Laer Flg22 2h		leaf discs	Original data	GEO bulk
270	ISOXABEN	0.73 >More info	0.25 >More info	CON	0.1 mM ISOXABEN		Original data	GEO bulk
271	Uniconazole 3 h	0.73 >More info	0.25 >More info	Mock 3 h			Original data	Effect of GA inhibitors on seedlings
272	Octopus overexpressor 35SDYG25	0.73 >More info	0.25 >More info	WS			Original data	GEO bulk
273	upb1-1 meristematic zone	0.73 >More info	0.25 >More info	Col-0 meristematic zone		Seedling root meristem zone	Original data	GEO bulk
274	gh3.5D uninoculated	0.73 >More info	0.25 >More info	Col-0 48 hpi			Original data	GEO bulk
275	indRKD4ox	0.73 >More info	0.25 >More info	Control (35S-GVG)		seedlings	Original data	GEO bulk
276	eto1-4	0.73 >More info	0.25 >More info	Col-0		whole seedling	Original data	GEO bulk
277	arf6 arf8 stage3	0.73 >More info	0.24 >More info	WT stage3			Original data	GEO bulk
278	nbp35-3/-	0.73 >More info	0.24 >More info	WT		whole seedling	Original data	GEO bulk
279	BAM8-Cat Ox untreated	0.73 >More info	0.24 >More info	WT untreated	none	shoot	Original data
280	35S:RPS4 eds1-2 24h	0.73 >More info	0.24 >More info	35S:RPS4 24h		leaves	Original data
281	L17 phyA line	0.73 >More info	0.24 >More info	WT		seedling	Original data	GEO bulk
282	pepr1-1 Pepr2-3 +Pep2 2h	0.73 >More info	0.24 >More info	WT +Pep2 2h	Pep2		Original data	GEO bulk
283	Octopus mutant DYG25	0.73 >More info	0.24 >More info	WS			Original data	GEO bulk
284	Indigo Carmine 0.5 uM	0.73 >More info	0.24 >More info	Control MV and IC	Indigo Carmine		Original data
285	spx1 spx2 resupplied Pi 4h	0.73 >More info	0.24 >More info	WT resupplied Pi 4h		seedlings	Original data
286	21h-DC3000 hrpA	0.73 >More info	0.24 >More info	21h-DC3000		leaves	Original data	GEO bulk
287	stele auxin	0.73 >More info	0.24 >More info	stele control	5 uM indole-3-acetic acid	stele	Original data	GEO bulk
288	ga1-3 SCL3OE	0.73 >More info	0.24 >More info	ga1-3		whole root	Original data
289	toc1-1-53hr	0.73 >More info	0.24 >More info	WT-untreated-53hr	none	seedlings aerial tissue	Original data	GEO bulk
290	shoot control pRBCS	0.73 >More info	0.23 >More info	shoot control total			Original data	GEO bulk
291	hira-protoplast	0.73 >More info	0.23 >More info	WT-protoplast		protoplast	Original data
292	atmyc2 Seedling BL	0.73 >More info	0.23 >More info	WT Seedling BL			Original data	GEO bulk
293	Mutant axr3-1 (IAA)	0.73 >More info	0.23 >More info	Col (IAA)			Original data	GEO bulk
294	express RfBP	0.73 >More info	0.23 >More info	WT		green part of the whole plant	Original data	GEO bulk
295	gun4-1	0.73 >More info	0.23 >More info	WT Col-0		seedling	Original data	GEO bulk
296	EBE-XVE +estradiol	0.73 >More info	0.23 >More info	WT-Col-0 +estradiol		shoot	Original data	GEO bulk
297	seedling h S Exp	0.73 >More info	0.23 >More info	seedling -S Exp		seedling	Original data
298	IAA 4h	0.73 >More info	0.23 >More info	control 4h		root	Original data	GEO bulk
299	35S::KLU	0.73 >More info	0.23 >More info	WT		Shoot	Original data
300	hni9 high nitrogen	0.73 >More info	0.23 >More info	WT high nitrogen		roots	Original data	GEO bulk
301	bHLH122 ox	0.73 >More info	0.23 >More info	WT Col-0	bHLH122 overexpression	shoot	Original data	GEO bulk
302	ABA SA 24h	0.73 >More info	0.23 >More info	EtOH 24h	24hr		Original data	GEO bulk
303	S82-2	0.73 >More info	0.23 >More info	wt			Original data	GEO bulk
304	sav1-1 shade	0.73 >More info	0.23 >More info	Col-0 shade		seedlings	Original data	GEO bulk
305	agb1 +ABA GC	0.73 >More info	0.23 >More info	Col-0 +ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
306	C24 24h cold	0.73 >More info	0.23 >More info	Col 24h cold		leaf	Original data	GEO bulk
307	24h volatiles Sm. R3089	0.73 >More info	0.23 >More info	24h untreated		whole seedling	Original data	GEO bulk
308	tt4	0.73 >More info	0.23 >More info	WT		aerial region	Original data	GEO bulk
309	roots ethylene	0.73 >More info	0.23 >More info	roots air			Original data	GEO bulk
310	root epidermis and lateral root cap -S	0.73 >More info	0.23 >More info	root epidermis and lateral root cap pH5.7			Original data	GEO bulk
311	Ovary	0.73 >More info	0.22 >More info	Seedling			Original data	GEO bulk
312	Laer Alternaria 3dpi	0.73 >More info	0.22 >More info	Laer Control		leaf discs	Original data	GEO bulk
313	Control KNO3 roots - 8hours	0.73 >More info	0.22 >More info	Control KCl roots - 8hours	5mM KNO3 on both sides for 8 hours	roots	Original data	GEO bulk
314	albino Ds13-2198-1	0.73 >More info	0.22 >More info	control			Original data	GEO bulk
315	root control pSCR	0.73 >More info	0.22 >More info	root control total	control	root	Original data	GEO bulk
316	root - 01% oxygen - 48h	0.73 >More info	0.22 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
317	Time-0 chr11-1chr17-1	0.73 >More info	0.22 >More info	Time-0 Col-0		leaf explants	Original data
318	Split KNO3 roots - 2days	0.73 >More info	0.22 >More info	Split KCl roots - 2days	5mM KNO3 on ONE side for 2 days	roots	Original data	GEO bulk
319	root endodermis and quiescent center pH4.6	0.73 >More info	0.22 >More info	root endodermis and quiescent center pH5.7			Original data	GEO bulk
320	seedling 3h after Gamma WT	0.73 >More info	0.22 >More info	seedling day 1 unirradiated WT	3h		Original data
321	ACN1-2	0.73 >More info	0.22 >More info	col-7			Original data	GEO bulk
322	ani1 T16	0.73 >More info	0.22 >More info	WT T16		root tissue	Original data	GEO bulk
323	middle flower buds J10A	0.73 >More info	0.22 >More info	middle flower buds J03A		middle flower buds	Original data	GEO bulk
324	ga1-3 1h GA4	0.73 >More info	0.22 >More info	ga1-3 1h water		shoots	Original data	GEO bulk
325	ACC 1 h	0.73 >More info	0.22 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
326	Col-0 leaf drought	0.73 >More info	0.22 >More info	Col-0 leaf water		leaf	Original data	GEO bulk
327	ASL9-ox	0.73 >More info	0.22 >More info	WT		aerial parts of seedlings	Original data	GEO bulk
328	Root submergence 7h	0.73 >More info	0.22 >More info	Root light control	7 h submergence in darkness	whole root	Original data	GEO bulk
329	sid2-2 safener	0.73 >More info	0.21 >More info	safener treated	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
330	cys-c1 root	0.73 >More info	0.21 >More info	Root-WT		roots	Original data	GEO bulk
331	roots bhlh100/101 0uM Fe	0.73 >More info	0.21 >More info	roots WT 0uM Fe	0uM Fe	roots	Original data	GEO bulk
332	AGL24 induced	0.73 >More info	0.21 >More info	WT-ESTRADIOL			Original data	GEO bulk
333	sid2	0.73 >More info	0.21 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
334	overexpresser LBD37 in -N	0.73 >More info	0.21 >More info	WT in -N	nitrogen depletion	whole seedling	Original data	GEO bulk
335	tcp13	0.73 >More info	0.21 >More info	WT		inflorescences	Original data	GEO bulk
336	mpk6-ko H2O 4h	0.73 >More info	0.21 >More info	Col-0 H2O 4h			Original data	GEO bulk
337	leaf rlt1-1rlt2-1	0.73 >More info	0.21 >More info	leaf Col-0		leaf	Original data	GEO bulk
338	atmyc2 Seedling BL+ABA	0.73 >More info	0.21 >More info	WT Seedling BL+ABA			Original data	GEO bulk
339	seedlings by volatiles from leafminer damaged Lima bean 24h	0.73 >More info	0.21 >More info	seedlings by volatiles from healthy Lima bean 24h		leaves	Original data	GEO bulk
340	Mutant gh3.5-1D	0.73 >More info	0.21 >More info	Col-0			Original data	GEO bulk
341	Col-0 mbs1-1 HL 3h	0.73 >More info	0.21 >More info	Col-0 WT HL 3h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
342	M6PR transgenic leaf 100mM NaCl	0.73 >More info	0.21 >More info	Col leaf 100mM NaCl		leaf	Original data	GEO bulk
343	JMJ24-IBM1 double knockout	0.73 >More info	0.21 >More info	WT			Original data	GEO bulk
344	Col-0 wt Hypoxic	0.73 >More info	0.21 >More info	Col-0 wt Aerobic	hypoxic treatment		Original data	GEO bulk
345	gun1gun5 drak pretreated	0.73 >More info	0.21 >More info	WT drak pretreated			Original data	GEO bulk
346	root cells endodermis and quiescent center -Fe	0.73 >More info	0.21 >More info	whole roots standard			Original data	GEO bulk
347	ACC 3 h	0.73 >More info	0.21 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
348	embryo proper linear-cotyledon	0.73 >More info	0.21 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
349	spch	0.73 >More info	0.21 >More info	Col-0 WT		whole seedling	Original data	GEO bulk
350	lib	0.73 >More info	0.21 >More info	WT		whole seedling	Original data	GEO bulk
351	large flower buds J10A	0.73 >More info	0.21 >More info	large flower buds J03A		large flower buds	Original data	GEO bulk
352	atm3	0.73 >More info	0.21 >More info	Col0		whole plant	Original data	GEO bulk
353	Blue Light 45 min	0.73 >More info	0.21 >More info	White Light 45min			Original data	Light treatments
354	R. sylvestris submerged	0.73 >More info	0.21 >More info	R. sylvestris air			Original data	GEO bulk
355	3m.KCl	0.73 >More info	0.20 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
356	pft1 23C	0.73 >More info	0.20 >More info	WT 23C		seedling	Original data	GEO bulk
357	Naphthyl- phthalamic acid 3 h	0.73 >More info	0.20 >More info	Mock 3 h			Original data	Effect of auxin inhibitors on seedlings
358	edm2-2 untreated	0.73 >More info	0.20 >More info	Col-0 untreated		seedlings	Original data	GEO bulk
359	phr1 phl1 Shoot-Pi	0.73 >More info	0.20 >More info	WT Shoot-Pi		shoots	Original data	GEO bulk
360	ahg2-1	0.73 >More info	0.20 >More info	WT (Col) control			Original data	GEO bulk
361	Starch sheath 5 days MS incubation	0.73 >More info	0.20 >More info	Starch sheath T0	MS incubation	laser capture microdissection	Original data	GEO bulk
362	root hypoxia total	0.73 >More info	0.20 >More info	root control total			Original data	GEO bulk
363	rgs1+no sugars	0.73 >More info	0.20 >More info	WT+no sugars		rosette leaves	Original data	GEO bulk
364	GRX-overexpression seedlings NaCl	0.73 >More info	0.20 >More info	WT seedlings NaCl		Seedlings	Original data	GEO bulk
365	cngc4	0.73 >More info	0.20 >More info	Ws-2		Seedlings	Original data	GEO bulk
366	root longitudinal zone-1 -Fe	0.73 >More info	0.20 >More info	root longitudinal zone-1 standard			Original data	GEO bulk
367	cat2-2; harvested 8h continiously maintained in high CO2;	0.73 >More info	0.20 >More info	WT; harvested 8h continiously maintained in high CO2;		2 whole rosettes	Original data
368	3m.KNO3	0.73 >More info	0.20 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
369	Laer Pst DC3000 12hpi	0.73 >More info	0.20 >More info	Laer Control		leaf discs	Original data	GEO bulk
370	roots IAA	0.73 >More info	0.20 >More info	roots mock			Original data	GEO bulk
371	coi1-PsmES4326-24hpi	0.73 >More info	0.20 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
372	npr1-1 SA	0.73 >More info	0.19 >More info	Col-0 SA		complete seedling	Original data
373	Col-0 RNAi-MBS2/mbs1-1 HL 3h	0.73 >More info	0.19 >More info	Col-0 WT HL 3h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
374	pericycle auxin	0.73 >More info	0.19 >More info	pericycle control	5 uM indole-3-acetic acid	pericycle	Original data	GEO bulk
375	prt6-1	0.73 >More info	0.19 >More info	Col-0	imbibed for 24 h	Pre-germinated seeds	Original data	GEO bulk
376	Atss3 Light4	0.73 >More info	0.19 >More info	Atss3 Dark0.5			Original data	GEO bulk
377	Imbibed 24 h ABA 30uM (seed)	0.73 >More info	0.19 >More info	Imbibed 24 h (seed)			Original data	Effect of ABA during seed imbibition
378	Shoot P recovery	0.73 >More info	0.19 >More info	Shoot -P	Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days		Original data	GEO bulk
379	Dark 40 min pls UV-A 5 min	0.73 >More info	0.19 >More info	Dark 45 min			Original data	Light treatments
380	wnk8-3 untreated	0.73 >More info	0.19 >More info	Col-0 untreated		seedlings	Original data	GEO bulk
381	embryo paclobutrazol	0.73 >More info	0.19 >More info	embryo-control	paclobutrazol	embryo	Original data	GEO bulk
382	EL (leaves 1-2) 14DAS	0.73 >More info	0.19 >More info	Control for tissue data			Original data	GEO bulk
383	root cells cortex 140mM NaCl 1 hour	0.73 >More info	0.19 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
384	gir root 4%glc	0.73 >More info	0.19 >More info	Col-7 root 4%glc		root	Original data	GEO bulk
385	epidermis auxin	0.73 >More info	0.19 >More info	epidermis control	5 uM indole-3-acetic acid	epidermis	Original data	GEO bulk
386	hsfa2 KO	0.73 >More info	0.19 >More info	WT (Col-0)		whole seedling	Original data	GEO bulk
387	psae1-3	0.73 >More info	0.19 >More info	WS		rosette leaves	Original data	GEO bulk
388	mutant-line1135	0.73 >More info	0.19 >More info	WT-control		whole plant	Original data	GEO bulk
389	2d red light grown pif1pif3pif4pif5 (pifq) mutant	0.73 >More info	0.19 >More info	2d red light grown WT(Col-0) seedlings			Original data	GEO bulk
390	root cells -Fe	0.73 >More info	0.19 >More info	whole roots standard		Standard media transferred to -Fe media for 24 hours prior to harvesting tissue	Original data	GEO bulk
391	noa1-2	0.73 >More info	0.19 >More info	Col-0		whole seedlings	Original data	GEO bulk
392	PIF5ox high R/FR	0.73 >More info	0.19 >More info	Col-0 high R/FR	high R/FR	seedlings	Original data	GEO bulk
393	seedling mSPL13	0.73 >More info	0.19 >More info	seedling Col-0			Original data	GEO bulk
394	ddm1-12	0.73 >More info	0.19 >More info	wt		whole seedling	Original data	GEO bulk
395	aox1a:rpoTmp MLD stressed	0.73 >More info	0.18 >More info	WT(Col0) MLD stressed (control aox1a:rpoTmp)		leaf	Original data
396	tbf1-SA	0.73 >More info	0.18 >More info	WT-SA	1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
397	root - 08% oxygen - 2h	0.73 >More info	0.18 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
398	cngc1	0.73 >More info	0.18 >More info	Ws-2		Seedlings	Original data	GEO bulk
399	root cells stele 140mM NaCl 48 hours	0.73 >More info	0.18 >More info	root cells stele standard 1 hour		root cells stele	Original data
400	ein2-PsmES4326-24hpi	0.73 >More info	0.18 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
401	ataf1-1 mutant Col-0 Un-inoculated	0.73 >More info	0.18 >More info	WT Col-0 Un-inoculated			Original data	GEO bulk
402	NaCl Col	0.73 >More info	0.18 >More info	Col			Original data	GEO bulk
403	BAM8-N Ox untreated	0.73 >More info	0.18 >More info	WT untreated	none	shoot	Original data
404	FLIGHT BRIC G PDFU-112 seedlings	0.73 >More info	0.18 >More info	GROUNDCONTROL BRIC G PDFU-135 seedlings		seedling	Original data
405	root cells stele 140mM NaCl 1 hour	0.73 >More info	0.18 >More info	root cells stele standard 1 hour		root cells stele	Original data
406	cellularized endosperm linear-cotyledon	0.73 >More info	0.18 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
407	sfr6 control	0.73 >More info	0.18 >More info	WT control		All aerial tissue	Original data	GEO bulk
408	root control pWOL	0.73 >More info	0.18 >More info	root control total	control	root	Original data	GEO bulk
409	er-2	0.73 >More info	0.18 >More info	WT		developing inflorescence tips	Original data	GEO bulk
410	Kas2 roots 2hr KCl control	0.73 >More info	0.18 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
411	2hr transitory KNO3 SR cell	0.73 >More info	0.18 >More info	2hr KCl control PrR cell		Stele root cells	Original data	GEO bulk
412	root epidermis and lateral root cap pH4.6	0.73 >More info	0.18 >More info	root epidermis and lateral root cap pH5.7			Original data	GEO bulk
413	pif4pif5 low R/FR	0.73 >More info	0.17 >More info	Col-0 low R/FR	low R/FR	seedlings	Original data	GEO bulk
414	tga1 tga4 2h KCl	0.73 >More info	0.17 >More info	Col 0 2h KCl	5 mM KCl	root	Original data	GEO bulk
415	35S:ATR1 like miR	0.73 >More info	0.17 >More info	WT for miR			Original data	GEO bulk
416	PIF5ox low R/FR	0.73 >More info	0.17 >More info	Col-0 low R/FR	low R/FR	seedlings	Original data	GEO bulk
417	high R/FR JA spray	0.73 >More info	0.17 >More info	high R/FR mock spray	high R/FR JA spray		Original data	GEO bulk
418	2hr transitory KNO3 LRCR cell	0.73 >More info	0.17 >More info	2hr KCl control LRCR cell		Lateral Root Cap root cells	Original data	GEO bulk
419	camta1 root drought	0.73 >More info	0.17 >More info	Col-0 root drought		root	Original data	GEO bulk
420	16C 4hs	0.73 >More info	0.17 >More info	L22-4hrs		whole plant excluding roots	Original data	GEO bulk
421	Kas -Fe 24h Roots	0.73 >More info	0.17 >More info	Kas +Fe 24h Roots			Original data	GEO bulk
422	hai1-2 low water potential	0.73 >More info	0.17 >More info	low water potential	low water potential stress	whole seedlings	Original data	GEO bulk
423	erf5 erf6	0.73 >More info	0.17 >More info	WT+water	water	seedlings	Original data	GEO bulk
424	M6PR transgenic 100mM NaCl	0.73 >More info	0.17 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
425	RL/LD atbzip16	0.73 >More info	0.17 >More info	RL/LD Ler	grown under dark or red-light and long-day (0.5 μmole m-2 sec-1)	aerial part of seedlings	Original data	GEO bulk
426	PRR5-VP 12h light on	0.73 >More info	0.17 >More info	WT 12h light on		whole plant	Original data	GEO bulk
427	Kas-1 -Fe 24h	0.73 >More info	0.17 >More info	Kas-1 +Fe 24h		roots	Original data	GEO bulk
428	root hypoxia pSCR	0.73 >More info	0.17 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
429	Col-0 overexpressing At1g54160 control	0.73 >More info	0.17 >More info	WT no treatement			Original data	GEO bulk
430	root control pPEP	0.73 >More info	0.17 >More info	root control total	control	root	Original data	GEO bulk
431	npr1-PsmES4326-24hpi	0.73 >More info	0.17 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
432	roottip control pWOL	0.73 >More info	0.17 >More info	roottip control total	control	roottip	Original data	GEO bulk
433	2hr transitory KNO3 PrR cell	0.73 >More info	0.17 >More info	2hr KCl control PrR cell		Protoplasted root cells	Original data	GEO bulk
434	long 14-degree-	0.73 >More info	0.17 >More info	control long			Original data	GEO bulk
435	Control KNO3 roots - 2days	0.73 >More info	0.17 >More info	Control KCl roots - 2days	5mM KNO3 on both sides for 2 days	roots	Original data	GEO bulk
436	ft-1 10C long-day	0.73 >More info	0.17 >More info	Ler 10C long-day		seeds	Original data	GEO bulk
437	QK HS	0.73 >More info	0.17 >More info	QK control	heat shocked	seedling	Original data	GEO bulk
438	roottip hypoxia pSHR	0.73 >More info	0.17 >More info	roottip hypoxia total	hypoxia	roottip	Original data	GEO bulk
439	embryo ABA	0.73 >More info	0.17 >More info	embryo-control	ABA	embryo	Original data	GEO bulk
440	FHY3p dark+DEX	0.73 >More info	0.17 >More info	FHY3p dark+mock			Original data	GEO bulk
441	2hr transitory KNO3 EPR cell	0.73 >More info	0.17 >More info	2hr KCl control EPR cell		Endodermis&Pericycle root cells	Original data	GEO bulk
442	root cells epidermis and lateral root cap -Fe	0.73 >More info	0.17 >More info	whole roots standard			Original data	GEO bulk
443	root longitudinal zone-4 low sulfur	0.73 >More info	0.17 >More info	root longitudinal zone-4 pH 5.7			Original data	GEO bulk
444	ape2 low light	0.73 >More info	0.17 >More info	Ws-2 low light			Original data	GEO bulk
445	At1g54160 ox	0.73 >More info	0.17 >More info	Col-0			Original data	GEO bulk
446	heart-stage-cotyledon	0.73 >More info	0.17 >More info	Control for tissue data			Original data	GEO bulk
447	Selenate (shoot)	0.73 >More info	0.16 >More info	Ws (shoot)			Original data	GEO bulk
448	pif4pif5 high R/FR	0.73 >More info	0.16 >More info	Col-0 high R/FR	high R/FR	seedlings	Original data	GEO bulk
449	Elevated CO2 LIMITING N NIGHT	0.73 >More info	0.16 >More info	Elevated CO2 AMPLE N NIGHT		Youngest Most Fully Expanded Leaf	Original data
450	brat1nrpe1	0.73 >More info	0.16 >More info	WT			Original data
451	root cells stele 140mM NaCl 20 hours	0.73 >More info	0.16 >More info	root cells stele standard 1 hour		root cells stele	Original data
452	oas-a1.1 Cd 24h	0.73 >More info	0.16 >More info	Cd 24h root		Shoot	Original data	GEO bulk
453	pGL3::GL3-GR Dex 4 hours	0.73 >More info	0.16 >More info	pGL3::GL3-GR mock 4 hours			Original data	GEO bulk
454	bZIP1ko mutant N-Light+	0.73 >More info	0.16 >More info	WT-sib N-Light+		whole plant	Original data	GEO bulk
455	OsRLCK253 expressing	0.73 >More info	0.16 >More info	WT		seedlings	Original data	GEO bulk
456	eds16 whole leaf 7d UI	0.73 >More info	0.16 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
457	FHY3p far-red+DEX	0.73 >More info	0.16 >More info	FHY3p far-red+mock			Original data	GEO bulk
458	long 10-degree-	0.73 >More info	0.16 >More info	control long			Original data	GEO bulk
459	slr-1 2h NAA	0.73 >More info	0.16 >More info	Col-0 2h NAA			Original data	GEO bulk
460	Cvi	0.73 >More info	0.16 >More info	Ler-2		~600 pooled 7 mm root tips	Original data	GEO bulk
461	WT cotyledons	0.73 >More info	0.16 >More info	Control for tissue data		cotyledons	Original data
462	Heat	0.73 >More info	0.16 >More info	Control	90 minutes at 38°C.		Original data	GEO bulk
463	35S::CBF2	0.73 >More info	0.16 >More info	Ws2			Original data	GEO bulk
464	heart-stage-root	0.73 >More info	0.16 >More info	Control for tissue data			Original data	GEO bulk
465	protoplasted roots pH4.6	0.73 >More info	0.16 >More info	Whole root - Std pH 1H	pH 4.6 for 24H		Original data	GEO bulk
466	Root wt CLE10	0.73 >More info	0.16 >More info	Root wt CLE25		root tip	Original data	GEO bulk
467	sfr3 control	0.73 >More info	0.16 >More info	WT control		All aerial tissue	Original data	GEO bulk
468	dorn1-1 Root MES buffer 30 min	0.73 >More info	0.16 >More info	Col-0 Root MES buffer 30 min		Roots of 5 day-old seedlings	Original data
469	Hypoxic e1 ate	0.73 >More info	0.16 >More info	Hypoxic Col-0	hypoxic conditions	seedlings	Original data	GEO bulk
470	abi4-102 +lincomycin	0.73 >More info	0.16 >More info	Col-0 +lincomycin			Original data	GEO bulk
471	Shoot Selenate	0.73 >More info	0.16 >More info	Shoot control	40 micromolar selenate	Shoot	Original data	GEO bulk
472	Mutant iaa17-6 (IAA)	0.73 >More info	0.16 >More info	Col (IAA)			Original data	GEO bulk
473	abi3-6 16 DAF Seed	0.73 >More info	0.16 >More info	WT (Col-0) 16 DAF Seed		developing seeds dissected from sliques	Original data
474	ced1	0.73 >More info	0.16 >More info	WT PEG 6hr		seedlings	Original data	GEO bulk
475	root cells stele 140mM NaCl 8 hours	0.73 >More info	0.15 >More info	root cells stele standard 1 hour		root cells stele	Original data
476	root cells stele 140mM NaCl 32 hours	0.73 >More info	0.15 >More info	root cells stele standard 1 hour		root cells stele	Original data
477	toc1-1-65hr	0.73 >More info	0.15 >More info	WT-untreated-65hr	none	seedlings aerial tissue	Original data	GEO bulk
478	WT heat shock	0.73 >More info	0.15 >More info	WT untreated		above-ground parts	Original data	GEO bulk
479	til1-1 37C	0.73 >More info	0.15 >More info	Col-0 37C			Original data	GEO bulk
480	Brz220 12 h	0.73 >More info	0.15 >More info	Mock 12 h			Original data	Effect of brassinosteroid inhibitors on seedlings
481	SA	0.73 >More info	0.15 >More info	WT mock		Whole seedling	Original data	GEO bulk
482	RRE1	0.73 >More info	0.15 >More info	Col C			Original data	GEO bulk
483	eds16 whole leaf 6hpi	0.73 >More info	0.15 >More info	Col whole leaf 6hpi		whole leaf	Original data	GEO bulk
484	2hr transitory KNO3 PeR cell	0.73 >More info	0.15 >More info	2hr KCl control PeR cell		Pericycle root cells	Original data	GEO bulk
485	Mutant ein2(leaf)	0.73 >More info	0.15 >More info	Col-0 (leaf)			Original data	GEO bulk
486	IAA 24h	0.73 >More info	0.15 >More info	control 24h		root	Original data	GEO bulk
487	Mature callus	0.73 >More info	0.15 >More info	Young callus		hypocotyls	Original data	GEO bulk
488	A. thaliana-A. lyrata hybrid	0.73 >More info	0.15 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
489	WT Nitrate 0.5h	0.73 >More info	0.15 >More info	WT untreated			Original data	GEO bulk
490	WT 30μM phosphate 8 hours.	0.73 >More info	0.15 >More info	WT control (not supplemented).			Original data
491	toc1-1-93hr	0.73 >More info	0.15 >More info	WT-untreated-93hr	none	seedlings aerial tissue	Original data	GEO bulk
492	middle flower buds J10B	0.73 >More info	0.15 >More info	middle flower buds J03B		middle flower buds	Original data	GEO bulk
493	GR-REV 120min	0.73 >More info	0.15 >More info	Col 120min			Original data	GEO bulk
494	WT Shoot Hypoxia	0.73 >More info	0.15 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
495	pskr1-5	0.73 >More info	0.15 >More info	wild type		Cotyledons	Original data	GEO bulk
496	4C 1h	0.73 >More info	0.15 >More info	4C 0h			Original data	GEO bulk
497	Aerobic e1 ate2	0.73 >More info	0.15 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
498	toc1-1-57hr	0.73 >More info	0.15 >More info	WT-untreated-57hr	none	seedlings aerial tissue	Original data	GEO bulk
499	Dark 44min pls RedLigh 1min	0.73 >More info	0.15 >More info	Dark 45 min			Original data	Light treatments
500	Ambient CO2 expanding leaf	0.73 >More info	0.15 >More info	Control for tissue data		expanding leaf	Original data
501	root longitudinal zone-3 NaCl	0.73 >More info	0.15 >More info	root longitudinal zone-3			Original data	GEO bulk
502	abi3-6 12 DAF Seed	0.73 >More info	0.14 >More info	WT (Col-0) 12 DAF Seed-3		developing seeds dissected from sliques	Original data
503	dTLEc systemic wounding	0.73 >More info	0.14 >More info	wt systemic wounding		leaves	Original data	GEO bulk
504	root longitudinal zone-3 low sulfur	0.73 >More info	0.14 >More info	root longitudinal zone-3 pH 5.7			Original data	GEO bulk
505	clf-28	0.73 >More info	0.14 >More info	Col		whole plant	Original data	GEO bulk
506	ABA	0.73 >More info	0.14 >More info	control			Original data	GEO bulk
507	BAM7-Cat Ox untreated	0.73 >More info	0.14 >More info	WT untreated	none	shoot	Original data
508	rdr6-15	0.73 >More info	0.14 >More info	Col-0		plant inflorescence	Original data
509	peripheral endosperm pre-globular	0.73 >More info	0.14 >More info	whole seed sections pre-globular			Original data	GEO bulk
510	Cor hrpS 24h	0.73 >More info	0.14 >More info	Mock 24h	Cor hrpS		Original data	GEO bulk
511	Drought Stress 24 h (root)	0.73 >More info	0.14 >More info	Stress mock 24 h (root)			Original data	Stress treatments
512	E2Fa-Dpa	0.73 >More info	0.14 >More info	WT			Original data	GEO bulk
513	WT seedlings NaCl	0.73 >More info	0.14 >More info	WT seedlings control		Seedlings	Original data	GEO bulk
514	sid2-2 mock	0.73 >More info	0.14 >More info	Col0 mock	DMSO control	rosette leaves	Original data	GEO bulk
515	Rosette leaf No12	0.73 >More info	0.14 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
516	seedling 1.5h after HZE atm-1	0.73 >More info	0.14 >More info	seedling day 1 unirradiated atm-1	1.5h		Original data
517	FAMA induced 4h	0.73 >More info	0.14 >More info	control 4h		Whole seedling	Original data	GEO bulk
518	aux1 mutant roots ethylene	0.73 >More info	0.14 >More info	roots air			Original data	GEO bulk
519	ape2 high light	0.73 >More info	0.14 >More info	Ws-2 high light			Original data	GEO bulk
520	9 hr Hypoxia Total RNA	0.73 >More info	0.14 >More info	9 hr Non-Stress Total RNA		seedlings	Original data	GEO bulk
521	pollinated pop2-1 flowers	0.73 >More info	0.14 >More info	pollinated WT flowers		flowers	Original data	GEO bulk
522	root hypoxia pCO2	0.73 >More info	0.14 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
523	1 h Light Total RNA	0.73 >More info	0.14 >More info	1h Dark Total RNA	1 h light control	whole seedlings	Original data	GEO bulk
524	oas-a1.1 root	0.73 >More info	0.14 >More info	WT-Untreated		Root	Original data	GEO bulk
525	Emwa1 inoculated psk 3 dpi	0.73 >More info	0.14 >More info	Emwa1 inoculated WT 3 dpi		Cotyledons	Original data	GEO bulk
526	etiolated atbzip16	0.73 >More info	0.14 >More info	etiolated Ler	etiolated	aerial part of seedlings	Original data	GEO bulk
527	DMTU	0.73 >More info	0.13 >More info	control			Original data	GEO bulk
528	TiO2 germinant	0.73 >More info	0.13 >More info	Millipore Water germinant	TiO2	seedling	Original data
529	seedling SPL13	0.73 >More info	0.13 >More info	seedling Col-0			Original data	GEO bulk
530	seedling 6h after Gamma atm-1	0.73 >More info	0.13 >More info	seedling day 1 unirradiated atm-1	6h		Original data
531	ARF10	0.73 >More info	0.13 >More info	Col-0			Original data	GEO bulk
532	myb21 myb24 stage3	0.73 >More info	0.13 >More info	WT stage3			Original data	GEO bulk
533	pad2-PsmES4326-24hpi	0.73 >More info	0.13 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
534	chalazal endosperm linear-cotyledon	0.73 >More info	0.13 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
535	seedling 6h after HZE atm-1	0.73 >More info	0.13 >More info	seedling day 1 unirradiated atm-1	6h		Original data
536	CsUBC13-OE-es	0.73 >More info	0.13 >More info	Col-es		root	Original data	GEO bulk
537	9 hr Hypoxia 1 hr recovery Total RNA	0.73 >More info	0.13 >More info	9 hr Non-Stress Total RNA		seedlings	Original data	GEO bulk
538	root cells endodermis 140mM NaCl 8 hours	0.73 >More info	0.13 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
539	control leaf (cmt 1d)	0.73 >More info	0.13 >More info	control leaf (WT 1d)		rosette leaf only	Original data	GEO bulk
540	prors1-2 leaves	0.73 >More info	0.13 >More info	Col-0 leaves		leaves	Original data
541	W(Liq) L-AOPP	0.73 >More info	0.13 >More info	W(Liq) Mock		whole plant	Original data	GEO bulk
542	toc1-1-69hr	0.73 >More info	0.13 >More info	WT-untreated-69hr	none	seedlings aerial tissue	Original data	GEO bulk
543	root cells cortex 140mM NaCl 8 hours	0.73 >More info	0.13 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
544	pGL3::GL3-GR Dex 24hours	0.73 >More info	0.13 >More info	pGL3::GL3-GR mock 24hours			Original data	GEO bulk
545	CHLM overexpression	0.73 >More info	0.13 >More info	Col-0 estr		green tissue	Original data	GEO bulk
546	roots bhlh100/101 100uM Fe	0.73 >More info	0.13 >More info	roots WT 100uM Fe	100uM Fe	roots	Original data	GEO bulk
547	ubc13A-es	0.73 >More info	0.13 >More info	Col-es		root	Original data	GEO bulk
548	globular-basal	0.73 >More info	0.13 >More info	Control for tissue data		globular embryo basal tissue	Original data	GEO bulk
549	IAA 2h	0.73 >More info	0.13 >More info	control 2h		root	Original data	GEO bulk
550	RRE2	0.73 >More info	0.13 >More info	Col C			Original data	GEO bulk
551	root cells stele 140mM NaCl 3 hours	0.73 >More info	0.13 >More info	root cells stele standard 1 hour		root cells stele	Original data
552	vip3	0.73 >More info	0.12 >More info	WT			Original data	GEO bulk
553	phyABCDE Dark	0.73 >More info	0.12 >More info	WT Dark	Dark	whole seedling	Original data	GEO bulk
554	ALC Toc1 light-dark Mock	0.73 >More info	0.12 >More info	Col light-dark Mock	no ethanol		Original data	GEO bulk
555	Kas-1 -Fe 48h	0.73 >More info	0.12 >More info	Kas-1 +Fe 24h		roots	Original data	GEO bulk
556	cat2-2; 0h switch to ambient CO2 concentrations;	0.73 >More info	0.12 >More info	WT; 0h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
557	WT cold 24h	0.73 >More info	0.12 >More info	WT cold 0h	cold at 4°C	seedlings	Original data	GEO bulk
558	Heat Recovery 24 h (shoot)	0.73 >More info	0.12 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
559	Kas -Fe 48h Roots	0.73 >More info	0.12 >More info	Kas +Fe 24h Roots			Original data	GEO bulk
560	1.5 hr nitrate	0.73 >More info	0.12 >More info	immediately prior to nitrogen addtion		roots from hydroponically grown plants	Original data	GEO bulk
561	ebs Pool	0.73 >More info	0.12 >More info	Ler Pool		seedling	Original data	GEO bulk
562	nd-1 V. longisporum-inoculated 48 hpi	0.73 >More info	0.12 >More info	Col-0 V. longisporum-inoculated 48 hpi		Pool of >50 individual roots	Original data
563	atgsnor1-1	0.73 >More info	0.12 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
564	whole roots 140 mM NaCl 1 hour	0.73 >More info	0.12 >More info	whole roots standard			Original data	GEO bulk
565	Mutant nph4-1_arf19-1	0.73 >More info	0.12 >More info	Col			Original data	GEO bulk
566	ms35 silique stage 9.10	0.73 >More info	0.12 >More info	Ler 8.9.10		anther and filament	Original data	GEO bulk
567	oas-a1.1 Cd 18h	0.73 >More info	0.12 >More info	Cd 18h root		Root	Original data	GEO bulk
568	columella auxin	0.73 >More info	0.12 >More info	columella control	5 uM indole-3-acetic acid	columella	Original data	GEO bulk
569	35S-GSH1 4C	0.73 >More info	0.12 >More info	Col-0 4C		seeds	Original data	GEO bulk
570	arr10 arr12 tZ	0.73 >More info	0.12 >More info	WT tZ			Original data	GEO bulk
571	smg7b-1	0.73 >More info	0.12 >More info	WT		whole plant	Original data	GEO bulk
572	gai Flg22 1h	0.73 >More info	0.12 >More info	Laer Flg22 1h		leaf discs	Original data	GEO bulk
573	Aerobic prt6	0.73 >More info	0.12 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
574	cop1 Seedling BL+ABA	0.73 >More info	0.12 >More info	WT Seedling BL+ABA			Original data	GEO bulk
575	arf6 arf8 stage2	0.73 >More info	0.12 >More info	WT stage2			Original data	GEO bulk
576	2hr continuous KNO3 SR cell	0.73 >More info	0.12 >More info	2hr KCl control PrR cell		Stele root cells	Original data	GEO bulk
577	ABA+DMTU	0.73 >More info	0.12 >More info	control			Original data	GEO bulk
578	ddm1-2	0.73 >More info	0.12 >More info	Col-0		plant inflorescence	Original data
579	atmyc2 cop1 Seedling BL	0.73 >More info	0.12 >More info	WT Seedling BL			Original data	GEO bulk
580	35S::HRE1 Hypoxic	0.73 >More info	0.11 >More info	Col-0 wt Hypoxic	hypoxic treatment		Original data	GEO bulk
581	4C 7d(SOIL)	0.73 >More info	0.11 >More info	4C 0h(SOIL)			Original data	GEO bulk
582	chl1-9 10mM NH4NO3	0.73 >More info	0.11 >More info	col 10mM NH4NO3		Root	Original data
583	hni9 low nitrogen	0.73 >More info	0.11 >More info	WT low nitrogen		roots	Original data	GEO bulk
584	root cells endodermis 140mM NaCl 3 hours	0.73 >More info	0.11 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
585	whole roots -Fe 6 hour	0.73 >More info	0.11 >More info	whole roots standard			Original data	GEO bulk
586	roots WT 0uM Fe	0.73 >More info	0.11 >More info	roots WT 100uM Fe	0uM Fe	roots	Original data	GEO bulk
587	SOS1 100mM NaCl	0.73 >More info	0.11 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
588	Light	0.73 >More info	0.11 >More info	Control			Original data	GEO bulk
589	pepr1-1 Pepr2-3 +Pep2 10h	0.73 >More info	0.11 >More info	WT +Pep2 10h	Pep2		Original data	GEO bulk
590	A. halleri highZn-leaf	0.73 >More info	0.11 >More info	A. petraea highZn-leaf			Original data	GEO bulk
591	scrm-D	0.73 >More info	0.11 >More info	Col-0 WT		whole seedling	Original data	GEO bulk
592	2hr continuous KNO3 PrR cell	0.73 >More info	0.11 >More info	2hr KCl control PrR cell		Protoplasted root cells	Original data	GEO bulk
593	mutant-line409	0.73 >More info	0.11 >More info	WT-control		whole plant	Original data	GEO bulk
594	12 hour 5929745	0.73 >More info	0.11 >More info	12 hour control (no chemical )			Original data	GEO bulk
595	mtf1-1	0.73 >More info	0.11 >More info	Col0		root	Original data
596	46T-Dry	0.73 >More info	0.11 >More info	WT-Dry	dehydration treatment 1h		Original data
597	Atss3 Dark8	0.73 >More info	0.11 >More info	Atss3 Dark0.5			Original data	GEO bulk
598	0 h Attim 17-1 1	0.73 >More info	0.11 >More info	0 h WT		seed	Original data
599	TaFLS overexpression line (OE2)	0.73 >More info	0.11 >More info	Col-0		Rosette leaves	Original data
600	chl1-5 Nitrate 0.5h	0.73 >More info	0.11 >More info	WT Nitrate 0.5h			Original data	GEO bulk
601	root cap pGL2(QC pSCRBRI1) 8h BL	0.73 >More info	0.11 >More info	root cap pGL2(QC pSCRBRI1) 0h BL	brassinosteroid	root	Original data
602	Ba1 UV	0.73 >More info	0.11 >More info	Ba1 mock	UV	seedling	Original data
603	auxin and brassinazole seedlings	0.73 >More info	0.11 >More info	auxin seedlings			Original data	GEO bulk
604	rid4 IBA	0.73 >More info	0.11 >More info	wild type IBA	12h 0.5 mg/L IBA	cultured explant	Original data	GEO bulk
605	Apex 14DAS	0.73 >More info	0.11 >More info	Control for tissue data			Original data	GEO bulk
606	Stigma	0.73 >More info	0.11 >More info	Seedling			Original data	GEO bulk
607	torpedo-apical	0.73 >More info	0.11 >More info	Control for tissue data		torpedo embryo apical tissue	Original data	GEO bulk
608	WT Red light 1h	0.73 >More info	0.11 >More info	WT Dark 1h		deetiolated seedling	Original data	GEO bulk
609	root cells endodermis 140mM NaCl 32 hours	0.73 >More info	0.11 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
610	root callus inducing medium 96 h	0.73 >More info	0.11 >More info	root callus inducing medium 0 h	96 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
611	sid2-PsmES4326-24hpi	0.73 >More info	0.11 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
612	Root -K	0.73 >More info	0.11 >More info	Control-root			Original data	GEO bulk
613	npr1 sni1 brca2a SA	0.73 >More info	0.11 >More info	npr1 sni1 SA	salicylic acid	seedling	Original data	GEO bulk
614	FOX line K19624	0.73 >More info	0.11 >More info	empty vector control (T3) FOX lines			Original data	GEO bulk
615	2hr continuous KNO3 PeR cell	0.73 >More info	0.11 >More info	2hr KCl control PeR cell		Pericycle root cells	Original data	GEO bulk
616	Ambient CO2 LIMITING N DAY	0.73 >More info	0.11 >More info	Ambient CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
617	root longitudinal zone-1 NaCl	0.73 >More info	0.11 >More info	root longitudinal zone-1			Original data	GEO bulk
618	WT+mannitol	0.73 >More info	0.11 >More info	WT+no sugars		rosette leaves	Original data	GEO bulk
619	pif5 high R/FR	0.73 >More info	0.11 >More info	Col-0 high R/FR	high R/FR	seedlings	Original data	GEO bulk
620	desiccated mature pollen grains	0.73 >More info	0.11 >More info	hydrated pollen grains			Original data	GEO bulk
621	arr-dmso-sample	0.73 >More info	0.10 >More info	Wt-dmso-sample		seedling	Original data
622	AsAKiin11 T1	0.73 >More info	0.10 >More info	C2 C2del and (As)AKiin11 control T1	one day post infusion with Agrobacterium containing antisense (As)AKiin11	Arabidopsis rosette leaves	Original data
623	Ambient CO2 leaf primordia	0.73 >More info	0.10 >More info	Control for tissue data		leaf primordia	Original data
624	dark +H2O2	0.73 >More info	0.10 >More info	dark	5 mM H2O2	seedling	Original data	GEO bulk
625	VND6 0h	0.73 >More info	0.10 >More info	wt 0h			Original data	GEO bulk
626	Methyl Jasmonate 3 h	0.73 >More info	0.10 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
627	root cells endodermis 140mM NaCl 20 hours	0.73 >More info	0.10 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
628	rao1-1 3h antimycin A	0.73 >More info	0.10 >More info	Col-Luc WT 3h antimycin A	50 µM antimycin A for 3 hours	whole green tissue	Original data	GEO bulk
629	Nicotinamide-61hr	0.73 >More info	0.10 >More info	WT-untreated-61hr	nicotinamide	aerial tissue	Original data	GEO bulk
630	npr1 sni1 ssn2 SA	0.73 >More info	0.10 >More info	npr1 sni1 SA	salicylic acid	seedling	Original data	GEO bulk
631	Col upon hypoxia 6 hrs	0.73 >More info	0.10 >More info	Col upon normoxia	hypoxia	seedling roots	Original data	GEO bulk
632	SAM SE agl15 agl18 double mutant	0.73 >More info	0.10 >More info	SAM SE Col			Original data	GEO bulk
633	KCl germinant	0.73 >More info	0.10 >More info	Millipore Water germinant	KCl	seedling	Original data
634	sid2-1 warm	0.73 >More info	0.10 >More info	WT warm		entire aerial part	Original data	GEO bulk
635	seedling 1.5h after HZE WT	0.73 >More info	0.10 >More info	seedling day 1 unirradiated WT	1.5h		Original data
636	cca1-lhy 30m light	0.73 >More info	0.10 >More info	30m light		whole seedlings	Original data	GEO bulk
637	Mutant nph4-1_arf19-1 (IAA)	0.73 >More info	0.10 >More info	Col (IAA)			Original data	GEO bulk
638	Expanding leaf	0.73 >More info	0.10 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
639	rrd2 IBA	0.73 >More info	0.10 >More info	wild type IBA	12h 0.5 mg/L IBA	cultured explant	Original data	GEO bulk
640	root control p35S	0.73 >More info	0.10 >More info	root control total	control	root	Original data	GEO bulk
641	small flower buds J10B	0.73 >More info	0.10 >More info	small flower buds J03B		small flower buds	Original data	GEO bulk
642	Heat Recovery 24 h (root)	0.73 >More info	0.10 >More info	Stress mock 24 h (root)			Original data	Stress treatments
643	hsfa2 KO heat shock	0.73 >More info	0.10 >More info	WT (Col-0) heat shock		whole seedling	Original data	GEO bulk
644	inhibitor A Treated	0.73 >More info	0.10 >More info	Negative Control			Original data	GEO bulk
645	Nuclei whole embryo	0.73 >More info	0.10 >More info	Control for tissue data		whole embryo	Original data
646	cca1-lhy before light	0.73 >More info	0.10 >More info	before light		whole seedlings	Original data	GEO bulk
647	Mutant lfy-12(shoot apex)	0.73 >More info	0.10 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
648	unpollinated pistil	0.73 >More info	0.10 >More info	Control for tissue data		pistil	Original data	GEO bulk
649	gul2-1 bri1-5 mutant	0.73 >More info	0.10 >More info	WT		7 day-old whole seedlings	Original data
650	root cells endodermis 140mM NaCl 48 hours	0.73 >More info	0.10 >More info	root cells endodermis standard 1 hour		root cells endodermis	Original data
651	K starvation (root)	0.73 >More info	0.10 >More info	Ws (root)			Original data	GEO bulk
652	RGA-GR-DEX	0.73 >More info	0.10 >More info	RGA-GR-MOCK	DEX	inflorescence	Original data	GEO bulk
653	root - 08% oxygen - 48h	0.73 >More info	0.10 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
654	shoot control pGL2	0.73 >More info	0.10 >More info	shoot control total			Original data	GEO bulk
655	Chitosan 3h Treatment	0.73 >More info	0.10 >More info	No Chitosan Control	chitosan treatment for 3 hours under continuous light.		Original data	GEO bulk
656	AhNAS2-RNAi Control	0.73 >More info	0.10 >More info	WT Control		Root	Original data	GEO bulk
657	ga1-3	0.73 >More info	0.09 >More info	wt		shoots	Original data	GEO bulk
658	Nicotinamide-85hr	0.73 >More info	0.09 >More info	WT-untreated-85hr	nicotinamide	aerial tissue	Original data	GEO bulk
659	2hr KCl control SR cell	0.73 >More info	0.09 >More info	2hr KCl control PrR cell		Stele root cells	Original data	GEO bulk
660	35S-GSH1 22C	0.73 >More info	0.09 >More info	Col-0 22C		seeds	Original data	GEO bulk
661	npr1-3 MOCK 48h	0.73 >More info	0.09 >More info	Col-0 MOCK 48h			Original data	GEO bulk
662	WUS-GR DEX Cycloheximide DEX	0.73 >More info	0.09 >More info	WUS-GR DEX Cycloheximide	Cycloheximide Dexamethasone		Original data	GEO bulk
663	torpedo-root	0.73 >More info	0.09 >More info	Control for tissue data			Original data	GEO bulk
664	psad1	0.73 >More info	0.09 >More info	WS		rosette leaves	Original data	GEO bulk
665	INA	0.73 >More info	0.09 >More info	CK	INA	seedling	Original data
666	Col-0 5dpi	0.73 >More info	0.09 >More info	Col-0 5d uininfected		mature fully expanded leaves	Original data	GEO bulk
667	ahg2-1sid2-2	0.73 >More info	0.09 >More info	WT (Col) control			Original data	GEO bulk
668	35S:CDO1 normoxia	0.73 >More info	0.09 >More info	WT normoxia	normoxia	whole rosette	Original data
669	iron minus 0 h	0.73 >More info	0.09 >More info	iron +0 h		root	Original data	GEO bulk
670	protoplasts T1 [flg22]	0.73 >More info	0.09 >More info	protoplasts T1 [CPK]		mesophyll protoplasts	Original data	GEO bulk
671	arr10 arr12	0.73 >More info	0.09 >More info	WT			Original data	GEO bulk
672	Heat 6h	0.73 >More info	0.09 >More info	At mock		rosettes - 5 leaves stage	Original data
673	long 12-degree-	0.73 >More info	0.09 >More info	control long			Original data	GEO bulk
674	ML (Mature leaves) 35DAS	0.73 >More info	0.09 >More info	Control for tissue data			Original data	GEO bulk
675	ms35 silique stage 5	0.73 >More info	0.09 >More info	Ler .5		anther and filament	Original data	GEO bulk
676	detached inflorescences 24h	0.73 >More info	0.09 >More info	detached inflorescences 0h	detached dark-held immature inflorescences	inflorescences from the primary bolts	Original data	GEO bulk
677	leaf	0.73 >More info	0.09 >More info	Control for tissue data		leaf	Original data	GEO bulk
678	efr-1 untreated	0.73 >More info	0.09 >More info	WT untreated	untreated		Original data	GEO bulk
679	oxt6 mutant	0.73 >More info	0.09 >More info	WT			Original data	GEO bulk
680	CDB1-Knockout	0.73 >More info	0.09 >More info	WT			Original data	GEO bulk
681	WT salt 12 h	0.73 >More info	0.09 >More info	WT salt 0 h	Salt with 120 mM NaCl for 24 h	seedlings	Original data	GEO bulk
682	4tga safener	0.73 >More info	0.09 >More info	safener treated	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
683	mkk2 control rep	0.73 >More info	0.09 >More info	Col-0 Time 0 rep			Original data	GEO bulk
684	low R/FR SA	0.73 >More info	0.09 >More info	low R/FR	low R/FR SA spray		Original data	GEO bulk
685	ahg2-1abi1-1	0.73 >More info	0.09 >More info	WT (Col) control			Original data	GEO bulk
686	pkl-1	0.73 >More info	0.09 >More info	WT		whole seedling	Original data	GEO bulk
687	coi1-16 ein2 sid2 ctrl	0.73 >More info	0.09 >More info	Col-0 ozone- (control genotype coi1-16 ein2 sid2)	control		Original data
688	ABI3GR +DEX -CHX	0.73 >More info	0.09 >More info	ABI3GR -DEX -CHX	DEX	root/protoplasts	Original data	GEO bulk
689	jkd-4 QC	0.73 >More info	0.09 >More info	Col-0 QC		Quiescent Center	Original data
690	4d red light grown hmr-5 seedlings	0.73 >More info	0.09 >More info	4d red light grown WT(Col-0) seedlings			Original data
691	rdr6-15	0.73 >More info	0.09 >More info	Col-0			Original data	GEO bulk
692	AFB1 0h	0.73 >More info	0.09 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
693	toc1-1-61hr	0.73 >More info	0.09 >More info	WT-untreated-61hr	none	seedlings aerial tissue	Original data	GEO bulk
694	Te CA	0.73 >More info	0.09 >More info	Col CA		Leaves	Original data
695	WT (Col-0) inflorescence moderate drought day 5	0.73 >More info	0.09 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
696	Ambient CO2 fully expanded leaf	0.73 >More info	0.09 >More info	Control for tissue data		fully expanded leaf	Original data
697	embryo proper heart stage	0.73 >More info	0.09 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
698	torpedo-basal	0.73 >More info	0.09 >More info	Control for tissue data		torpedo embryo basal tissue	Original data	GEO bulk
699	Tsu -Fe 48h Shoots	0.73 >More info	0.09 >More info	Tsu +Fe 24h Shoots			Original data	GEO bulk
700	embryo proper	0.73 >More info	0.09 >More info	Control for tissue data			Original data	GEO bulk
701	root longitudinal zone-2 NaCl	0.73 >More info	0.08 >More info	root longitudinal zone-2			Original data	GEO bulk
702	Transgenic LEC2GR Seedling 4h Dex	0.73 >More info	0.08 >More info	WT WS-O Seedling 4h Dex			Original data	GEO bulk
703	large flower buds J10B	0.73 >More info	0.08 >More info	large flower buds J03B		large flower buds	Original data	GEO bulk
704	L2.5 mutant	0.73 >More info	0.08 >More info	Wt			Original data	GEO bulk
705	rsa3-1 Na 24h	0.73 >More info	0.08 >More info	WT Na 24h	120 mM NaCl for 24 h	whole seedlings	Original data	GEO bulk
706	dark +lincomycin	0.73 >More info	0.08 >More info	dark -lincomycin			Original data	GEO bulk
707	SAM L-AOPP	0.73 >More info	0.08 >More info	SAM Mock		shoot apical meristem	Original data	GEO bulk
708	BLM	0.73 >More info	0.08 >More info	CK	BLM	seedling	Original data
709	Ws HS	0.73 >More info	0.08 >More info	Ws control	heat shocked	seedling	Original data	GEO bulk
710	Shoot apex vegetative &Young leaves	0.73 >More info	0.08 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
711	hexa mutant (higher order mutant)	0.73 >More info	0.08 >More info	col control (higher order mutant)			Original data	GEO bulk
712	WT (Col-0) inflorescence well-watered day 3	0.73 >More info	0.08 >More info	WT (Col-0) inflorescence well-watered day 0		Unopen flower buds	Original data	GEO bulk
713	Mutant ap2-6(flower)	0.73 >More info	0.08 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
714	6h volatiles Sm. R3089	0.73 >More info	0.08 >More info	6h untreated		whole seedling	Original data	GEO bulk
715	Whole root - S 48H	0.73 >More info	0.08 >More info	Whole root - S 0H			Original data	GEO bulk
716	Root P recovery	0.73 >More info	0.08 >More info	Root -P	Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days		Original data	GEO bulk
717	Hypoxic prt6	0.73 >More info	0.08 >More info	Hypoxic Col-0	hypoxic conditions	seedlings	Original data	GEO bulk
718	shoot hypoxia pRBCS	0.73 >More info	0.08 >More info	shoot hypoxia total			Original data	GEO bulk
719	Dark	0.73 >More info	0.08 >More info	Control			Original data	GEO bulk
720	Var2-1 roots 2hr KCl control	0.73 >More info	0.08 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
721	Kas -Fe 24h Shoots	0.73 >More info	0.08 >More info	Kas +Fe 24h Shoots			Original data	GEO bulk
722	AtMYB30-as 90-105 min Xanthomonas	0.73 >More info	0.08 >More info	WT 90-105 min Xanthomonas			Original data	GEO bulk
723	Whole root - S 24H	0.73 >More info	0.08 >More info	Whole root - S 0H			Original data	GEO bulk
724	aox1a(line) untreated	0.73 >More info	0.08 >More info	WT(Col0) untreated (control aox1a)		leaf	Original data
725	small flower buds J10A	0.73 >More info	0.08 >More info	small flower buds J03A		small flower buds	Original data	GEO bulk
726	root cells stele -Fe	0.73 >More info	0.08 >More info	whole roots standard			Original data	GEO bulk
727	Ts5 roots 2hr KNO3 nitrogen	0.73 >More info	0.08 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
728	globular-apical	0.73 >More info	0.08 >More info	Control for tissue data		globular embryo apical tissue	Original data	GEO bulk
729	SA Treated	0.73 >More info	0.08 >More info	Water			Original data	GEO bulk
730	4tga mock	0.73 >More info	0.08 >More info	Col0 mock	DMSO control	rosette leaves	Original data	GEO bulk
731	tbf1-mock spray	0.73 >More info	0.08 >More info	WT-mock spray	water for 6 hrs (spray)	mature leaf	Original data	GEO bulk
732	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold	0.73 >More info	0.08 >More info	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1	12h cold (4C)	rosettes	Original data	GEO bulk
733	SND1 0h	0.73 >More info	0.08 >More info	wt 0h			Original data	GEO bulk
734	expressing C2 Mock	0.73 >More info	0.08 >More info	LUC2C			Original data	GEO bulk
735	AmGSTF1 expressor	0.73 >More info	0.08 >More info	WT		leaf tissue	Original data	GEO bulk
736	rli	0.73 >More info	0.08 >More info	WT		whole plant	Original data	GEO bulk
737	anac017-2 H2O2 3h	0.73 >More info	0.08 >More info	WT H2O2 3h	3h_H2O2		Original data	GEO bulk
738	OXUPB1-2 elongation zone	0.73 >More info	0.08 >More info	Col-0 elongation zone		Seedling root elongation zone	Original data	GEO bulk
739	seed germinating in countinuous light 12 h SL	0.73 >More info	0.08 >More info	Control for tissue data		seed	Original data	GEO bulk
740	shoot hypoxia pKAT1	0.73 >More info	0.08 >More info	shoot hypoxia total			Original data	GEO bulk
741	48 h S Attim 17-1 1	0.73 >More info	0.07 >More info	0 h Attim 17-1 1		seed	Original data
742	Mutant lwd1_lwd2	0.73 >More info	0.07 >More info	Wildtype for phy mutants			Original data	GEO bulk
743	CBF3 0mM NaCl	0.73 >More info	0.07 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
744	irradiated leaf (cmt 5d)	0.73 >More info	0.07 >More info	control leaf (cmt 5d)		rosette leaf only	Original data	GEO bulk
745	WT (Col-0) inflorescence drought day 10	0.73 >More info	0.07 >More info	WT (Col-0) inflorescence well-watered day 10		Unopen flower buds	Original data	GEO bulk
746	ssi2 sid2	0.73 >More info	0.07 >More info	WT COL		leaves	Original data	GEO bulk
747	8 hr nitrate	0.73 >More info	0.07 >More info	immediately prior to nitrogen addtion		roots from hydroponically grown plants	Original data	GEO bulk
748	ice1 3H Cold	0.73 >More info	0.07 >More info	WT 3H Cold			Original data	GEO bulk
749	lec1-1 12 DAF Seed	0.73 >More info	0.07 >More info	WT (WS) 12 DAF Seed		developing seeds dissected from sliques	Original data
750	LWD1 and LWD2 in photoperiod regulation (lwd1lwd2 )	0.73 >More info	0.07 >More info	LWD1 and LWD2 in photoperiod regulation (wt )			Original data	GEO bulk
751	root cells cortex 140mM NaCl 32 hours	0.73 >More info	0.07 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
752	cat2-hCO2	0.73 >More info	0.07 >More info	Col0-hCO2	grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
753	tga2 tga5 tga6 ctrl	0.73 >More info	0.07 >More info	Col-0 ctrl (control genotype tga2 tag5 tga6)	control		Original data
754	Pedicels stage15	0.73 >More info	0.07 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
755	2d dark-grown WT(Col-0)/1 hr red light	0.73 >More info	0.07 >More info	2d dark-grown WT seedling			Original data	GEO bulk
756	T1080 UV	0.73 >More info	0.07 >More info	T1080 mock	UV	seedling	Original data
757	35S::ERF104 H2O 4h	0.73 >More info	0.07 >More info	Col-0 H2O 4h			Original data	GEO bulk
758	chalazal endosperm pre-globular	0.73 >More info	0.07 >More info	whole seed sections pre-globular			Original data	GEO bulk
759	tga1 tga4 2h KNO3	0.73 >More info	0.07 >More info	Col 0 2h KNO3	5 mM KNO3	root	Original data	GEO bulk
760	gun5 norflurazon	0.73 >More info	0.07 >More info	gun5 control			Original data	GEO bulk
761	coi1	0.73 >More info	0.07 >More info	Col-0		Leaves	Original data	GEO bulk
762	35S::Zat12+H2O2	0.73 >More info	0.07 >More info	WT+H2O2	H2O2		Original data	GEO bulk
763	Mutant ap1-15(flower)	0.73 >More info	0.07 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
764	root cells cortex 140mM NaCl 20 hours	0.73 >More info	0.07 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
765	essp3/brm5 mutant	0.73 >More info	0.07 >More info	WT (Pro-beta-CG;GUS)			Original data	GEO bulk
766	chl1-12 10mM NH4NO3	0.73 >More info	0.07 >More info	col 10mM NH4NO3		Root	Original data
767	Col-0 DEX Shade	0.73 >More info	0.07 >More info	Col-0 DEX WL		seedlings	Original data
768	micropylar endosperm linear-cotyledon	0.73 >More info	0.07 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
769	phyABCDE Rc50	0.73 >More info	0.07 >More info	phyABCDE Dark	red light	whole seedling	Original data	GEO bulk
770	pad4-est1b-1-doublemutant	0.73 >More info	0.07 >More info	pad4-mutant		developed rosette leaves	Original data	GEO bulk
771	2xX4x interploidy cross	0.73 >More info	0.07 >More info	2xX2x cross			Original data	GEO bulk
772	Atss3 Dark4	0.73 >More info	0.07 >More info	Atss3 Dark0.5			Original data	GEO bulk
773	osmotic 10day leaf	0.73 >More info	0.07 >More info	mock 10day leaf	osmotic	leaves	Original data	GEO bulk
774	A. lyrata	0.73 >More info	0.07 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
775	wrky33 mock	0.73 >More info	0.07 >More info	WT mock	14 hour mock control	leaves	Original data
776	piffq 3d WL	0.73 >More info	0.07 >More info	WT 3d WL		whole seedling	Original data	GEO bulk
777	Starch sheath 2 days MS incubation	0.73 >More info	0.07 >More info	Starch sheath T0	MS incubation	laser capture microdissection	Original data	GEO bulk
778	expressing C2 MeJA	0.73 >More info	0.07 >More info	LUC2T			Original data	GEO bulk
779	OsTOP6B ox	0.73 >More info	0.06 >More info	WT			Original data	GEO bulk
780	abi4-102 (I)	0.73 >More info	0.06 >More info	Col (I)		rosette	Original data	GEO bulk
781	seed germinating in countinuous light 6 h SL	0.73 >More info	0.06 >More info	Control for tissue data		seed	Original data	GEO bulk
782	Leaf	0.73 >More info	0.06 >More info	Control for tissue data		leaf	Original data	GEO bulk
783	OsTOP6A1 ox	0.73 >More info	0.06 >More info	Seedling WT			Original data	GEO bulk
784	torpedo-meristem	0.73 >More info	0.06 >More info	Control for tissue data		torpedo embryo meristem tissue	Original data	GEO bulk
785	embryo proper mature green	0.73 >More info	0.06 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
786	pGL1::GL1-GR Dex 24hours	0.73 >More info	0.06 >More info	pGL1::GL1-GR mock 24hours			Original data	GEO bulk
787	GA4 3 h (ga1 seed)	0.73 >More info	0.06 >More info	Mock 3 h			Original data	Effect of gibberellin during seed imbibition
788	Col-0 Mock Shade	0.73 >More info	0.06 >More info	Col-0 Mock WL		seedlings	Original data
789	PstDC3000 48h	0.73 >More info	0.06 >More info	WT untreated	48hr	leaf	Original data	GEO bulk
790	peripheral endosperm heart stage	0.73 >More info	0.06 >More info	Control for tissue data		peripheral endosperm captured by LCM	Original data	GEO bulk
791	root cap pGL2(QC pSCRBRI1) 0h BL	0.73 >More info	0.06 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
792	Mutant clv3-7(flower)	0.73 >More info	0.06 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
793	Whole root - S 72H	0.73 >More info	0.06 >More info	Whole root - S 0H			Original data	GEO bulk
794	CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold	0.73 >More info	0.06 >More info	CSP1 immonoprecipitated RNA 35S:HF-RPL18	12h cold (4C)	rosettes	Original data	GEO bulk
795	upf2i	0.73 >More info	0.06 >More info	WT		whole plant	Original data	GEO bulk
796	Seeds stage3 with siliques	0.73 >More info	0.06 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
797	lec1-1 Post-Mature Green Seed	0.73 >More info	0.06 >More info	Control for tissue data			Original data	GEO bulk
798	psad1-1 stn7-1	0.73 >More info	0.06 >More info	Col-0		rosette leaves	Original data	GEO bulk
799	root cortex 40 mM NaCl	0.73 >More info	0.06 >More info	root cortex			Original data	GEO bulk
800	root longitudinal zone-2 -Fe	0.73 >More info	0.06 >More info	root longitudinal zone-2 standard			Original data	GEO bulk
801	WT 16C	0.73 >More info	0.06 >More info	WT 23C		seedling	Original data	GEO bulk
802	A2hsfa1-ox in quadruple mutant heat shock	0.73 >More info	0.06 >More info	hsfa1 quadruple mutant heat shock		whole seedling	Original data	GEO bulk
803	35S::LFY	0.73 >More info	0.06 >More info	Landsberg erecta		seedlings	Original data	GEO bulk
804	Prohexadione 3 h	0.73 >More info	0.06 >More info	Mock 3 h			Original data	Effect of GA inhibitors on seedlings
805	250uM KNO3 20min shoots	0.73 >More info	0.06 >More info	250uM KCL 20min shoots		shoots	Original data	GEO bulk
806	AhNAS2-RNAi +Zn	0.73 >More info	0.06 >More info	WT +Zn		Root	Original data	GEO bulk
807	Cd 24h root	0.73 >More info	0.06 >More info	WT-Untreated		Shoot	Original data	GEO bulk
808	Anoxia	0.73 >More info	0.06 >More info	Control	anoxia for 6h at 23°C in the dark.		Original data	GEO bulk
809	opr3 OPDA 8 h	0.73 >More info	0.06 >More info	opr3 0 h			Original data	GEO bulk
810	proline	0.73 >More info	0.06 >More info	noneHS			Original data	GEO bulk
811	rdo4 siliques	0.73 >More info	0.06 >More info	WT Ler siliques			Original data	GEO bulk
812	Mutant ag-12(shoot apex)	0.73 >More info	0.06 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
813	Col whole leaf 1dpi	0.73 >More info	0.06 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
814	agb1 -ABA GC	0.73 >More info	0.05 >More info	Col-0 -ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
815	Apex 5DAS	0.73 >More info	0.05 >More info	Control for tissue data			Original data	GEO bulk
816	Kas -Fe 48h Shoots	0.73 >More info	0.05 >More info	Kas +Fe 24h Shoots			Original data	GEO bulk
817	lec1-1 24h post-fertilization Seed	0.73 >More info	0.05 >More info	Control for tissue data			Original data	GEO bulk
818	mil4 sid2	0.73 >More info	0.05 >More info	Col		rosettes	Original data	GEO bulk
819	seed germinating in countinuous light 1 h SL	0.73 >More info	0.05 >More info	Control for tissue data		seed	Original data	GEO bulk
820	rao1-2 3h antimycin A	0.73 >More info	0.05 >More info	Col-Luc WT 3h antimycin A	50 µM antimycin A for 3 hours	whole green tissue	Original data	GEO bulk
821	pistil 0.5HAP	0.73 >More info	0.05 >More info	unpollinated pistil		pistil	Original data	GEO bulk
822	RRE1 Chitin	0.73 >More info	0.05 >More info	Chitin			Original data	GEO bulk
823	CLV3n cells	0.73 >More info	0.05 >More info	Protoplast Induced			Original data	GEO bulk
824	shoot control pSultr2:2	0.73 >More info	0.05 >More info	shoot control total			Original data	GEO bulk
825	SOS1 0mM NaCl	0.73 >More info	0.05 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
826	SCL3 OE	0.73 >More info	0.05 >More info	Col-0		whole root	Original data	GEO bulk
827	bam8 untreated	0.73 >More info	0.05 >More info	WT untreated	none	shoot	Original data
828	Proximalhalf (leaf7)	0.73 >More info	0.05 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
829	170G5-16	0.73 >More info	0.05 >More info	Ler-2		~600 pooled 7 mm root tips	Original data	GEO bulk
830	abi1 hypocotyl	0.73 >More info	0.05 >More info	Ler hypocotyl		hypocotyl	Original data	GEO bulk
831	Myzus persicae saliva	0.73 >More info	0.05 >More info	Control			Original data	GEO bulk
832	nas4x roots + Fe	0.73 >More info	0.05 >More info	WT roots + Fe		Roots	Original data	GEO bulk
833	HSP90 Reduced Salk hsp90.1	0.73 >More info	0.05 >More info	HSP90 Reduced Control		All aerial tissue	Original data	GEO bulk
834	det2 light-dark	0.73 >More info	0.05 >More info	det2 light	light-dark		Original data	GEO bulk
835	root hypoxia p35S	0.73 >More info	0.05 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
836	rgs1+mannitol	0.73 >More info	0.05 >More info	WT+mannitol		rosette leaves	Original data	GEO bulk
837	NaCl cpctry	0.73 >More info	0.05 >More info	NaCl Col			Original data	GEO bulk
838	2hr continuous KNO3 LRCR cell	0.73 >More info	0.05 >More info	2hr KCl control LRCR cell		Lateral Root Cap root cells	Original data	GEO bulk
839	miR mutant (higher order mutant)	0.73 >More info	0.05 >More info	col control (higher order mutant)			Original data	GEO bulk
840	seedling	0.73 >More info	0.05 >More info	Control for tissue data		seedling	Original data	GEO bulk
841	aphid saliva treated	0.73 >More info	0.05 >More info	control	aphid saliva treated	leaves	Original data	GEO bulk
842	BLM+INA	0.73 >More info	0.05 >More info	CK	BLM and INA	seedling	Original data
843	roottip hypoxia total	0.73 >More info	0.05 >More info	roottip control total			Original data	GEO bulk
844	erf104-ko H2O 4h	0.73 >More info	0.05 >More info	Col-0 H2O 4h			Original data	GEO bulk
845	WT 30μM arsenate 8 hours.	0.73 >More info	0.05 >More info	WT control (not supplemented).			Original data
846	Ambient CO2 LIMITING N NIGHT	0.73 >More info	0.05 >More info	Ambient CO2 AMPLE N NIGHT		Youngest Most Fully Expanded Leaf	Original data
847	gpa1-4/agb1-2 clean-air 2d	0.73 >More info	0.05 >More info	Col clean-air 2d	clean-air		Original data	GEO bulk
848	elf3-7-16ºC	0.73 >More info	0.05 >More info	WT-16ºC			Original data	GEO bulk
849	Col-0 (t-zeatin 3 h)	0.73 >More info	0.05 >More info	Col-0			Original data	Cytokinin treatment of seedlings
850	Var2-1 roots 2hr KNO3 nitrogen	0.73 >More info	0.05 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
851	whole seeds mature green	0.73 >More info	0.05 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
852	prmt5-5	0.73 >More info	0.05 >More info	WT Col continuous light		Aerial tissue	Original data	GEO bulk
853	slr-1 6h NAA	0.73 >More info	0.05 >More info	Col-0 6h NAA			Original data	GEO bulk
854	48 h S WT	0.73 >More info	0.05 >More info	0 h WT		seed	Original data
855	siliques	0.73 >More info	0.05 >More info	Control for tissue data			Original data	GEO bulk
856	nNOS-drought	0.73 >More info	0.05 >More info	WT-drought		leaf	Original data
857	Whole root - S 12H	0.73 >More info	0.05 >More info	Whole root - S 0H			Original data	GEO bulk
858	whole roots -Fe 24hour	0.73 >More info	0.04 >More info	whole roots standard			Original data	GEO bulk
859	Nuclei suspensor	0.73 >More info	0.04 >More info	Control for tissue data		suspensor	Original data
860	Carpels stage15	0.73 >More info	0.04 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
861	WUS-GR DEX	0.73 >More info	0.04 >More info	Mock	Dexamethasone		Original data	GEO bulk
862	Col-0 low oxygen	0.73 >More info	0.04 >More info	Col-0 control	low oxygen	root	Original data	GEO bulk
863	iron minus 6 h	0.73 >More info	0.04 >More info	iron +6 h		root	Original data	GEO bulk
864	Col-0 37C	0.73 >More info	0.04 >More info	Col-0 22C			Original data	GEO bulk
865	Roots Cd	0.73 >More info	0.04 >More info	Roots control	Cd	Root	Original data	GEO bulk
866	ovule	0.73 >More info	0.04 >More info	Control for tissue data		ovule	Original data	GEO bulk
867	micropylar endosperm heart stage	0.73 >More info	0.04 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
868	WT Seedling BL+ABA	0.73 >More info	0.04 >More info	WT Seedling BL			Original data	GEO bulk
869	seed during stratification 48 h S	0.73 >More info	0.04 >More info	Control for tissue data		seed	Original data	GEO bulk
870	Cocultivation 8 hrs leaf	0.73 >More info	0.04 >More info	Mock cocultivation 8 hrs leaf		Leaf	Original data
871	AtMinD1 Prolonged-induction	0.73 >More info	0.04 >More info	Control		whole plant	Original data	GEO bulk
872	lec2-1 12 DAF Seed	0.73 >More info	0.04 >More info	WT (WS) 12 DAF Seed		developing seeds dissected from sliques	Original data
873	HSP90 Reduced RNAi-A1	0.73 >More info	0.04 >More info	HSP90 Reduced Col-0 CS60000		All aerial tissue	Original data	GEO bulk
874	JA	0.73 >More info	0.04 >More info	Col-0 mock		Whole seedling	Original data	GEO bulk
875	Methyl Jasmonate 0.5 h	0.73 >More info	0.04 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
876	root cells cortex 140mM NaCl 3 hours	0.73 >More info	0.04 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
877	vtc2 day 14 induction	0.73 >More info	0.04 >More info	WT day 14 induction		day 14 induction of somatic embryogenesis	Original data	GEO bulk
878	lec1-1 Mature Green Seed	0.73 >More info	0.04 >More info	Control for tissue data			Original data	GEO bulk
879	2hr continuous KNO3 EPR cell	0.73 >More info	0.04 >More info	2hr KCl control EPR cell		Endodermis&Pericycle root cells	Original data	GEO bulk
880	hog1-7	0.73 >More info	0.04 >More info	wt		whole seedling	Original data	GEO bulk
881	Col 0 2h KNO3	0.73 >More info	0.04 >More info	Col 0 2h KCl	5 mM KNO3	root	Original data	GEO bulk
882	2hr continuous KNO3 and MSX PeR cell	0.73 >More info	0.04 >More info	2hr continuous KCl and MSX control PeR cell		Pericycle root cells	Original data	GEO bulk
883	Split KNO3 roots - 8hours	0.73 >More info	0.04 >More info	Split KCl roots - 8hours	5mM KNO3 on ONE side for 8 hours	roots	Original data	GEO bulk
884	Nuclei proembryo	0.73 >More info	0.04 >More info	Control for tissue data		proembryo	Original data
885	scrm-D:mute	0.73 >More info	0.04 >More info	Col-0 WT		whole seedling	Original data	GEO bulk
886	columella control	0.73 >More info	0.04 >More info	Control for tissue data	mock	columella	Original data	GEO bulk
887	Flower (stage12)	0.73 >More info	0.04 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
888	GA3 0.5 h (ga1)	0.73 >More info	0.04 >More info	Mock 0.5 h (ga1)			Original data	Basic hormone treatment of seedlings
889	4x	0.73 >More info	0.04 >More info	2x		two week old seedlings	Original data
890	WT cold 12 h	0.73 >More info	0.04 >More info	WT cold 0h	GSM955987	seedlings	Original data	GEO bulk
891	abh1 +ABA	0.73 >More info	0.04 >More info	Col-0 +ABA			Original data	GEO bulk
892	vte2 leaves 120h LT	0.73 >More info	0.04 >More info	Col leaves 120h LT	12h	9-11th adult leaves	Original data
893	etiolated cop1	0.73 >More info	0.04 >More info	etiolated Col-0		whole seedlings	Original data	GEO bulk
894	seedlings by volatiles from leafminer damaged Lima bean 48h	0.73 >More info	0.04 >More info	seedlings by volatiles from healthy Lima bean 48h		leaves	Original data	GEO bulk
895	Fe starvation 24 h	0.73 >More info	0.04 >More info	Control			Original data	GEO bulk
896	vte1-1 1d vernalization	0.73 >More info	0.04 >More info	WT 1d vernalization			Original data	GEO bulk
897	16C 10h	0.73 >More info	0.04 >More info	L22-10hrs		whole plant excluding roots	Original data	GEO bulk
898	gtl1	0.73 >More info	0.04 >More info	WT		trichome	Original data	GEO bulk
899	Cold Stress 24 h (root)	0.73 >More info	0.04 >More info	Stress mock 24 h (root)			Original data	Stress treatments
900	apl	0.73 >More info	0.04 >More info	WT		phloem	Original data
901	Genotoxic Stress 3 h (shoot)	0.73 >More info	0.04 >More info	Stress mock 3 h (shoot)			Original data	Stress treatments
902	gtl1-1	0.73 >More info	0.04 >More info	WT		trichome	Original data	GEO bulk
903	8h-DC3000 avrRpm1	0.73 >More info	0.04 >More info	8h-DC3000		leaves	Original data	GEO bulk
904	csn4-1 dark	0.73 >More info	0.04 >More info	WT light			Original data	GEO bulk
905	C24 UV1	0.73 >More info	0.04 >More info	C24 mock	UV	seedling	Original data
906	mutant-line774	0.73 >More info	0.04 >More info	WT-control		whole plant	Original data	GEO bulk
907	siliques AtHb1 hypoxia	0.73 >More info	0.03 >More info	siliques WT hypoxia	hypoxia	silique	Original data	GEO bulk
908	RRE2 Chitin	0.73 >More info	0.03 >More info	Chitin			Original data	GEO bulk
909	Nuclear GSH3	0.73 >More info	0.03 >More info	Cytoplasmic GSH3	Media change		Original data	GEO bulk
910	sid2	0.73 >More info	0.03 >More info	Col		rosettes	Original data	GEO bulk
911	Col-0 4C	0.73 >More info	0.03 >More info	Col-0 22C		seeds	Original data	GEO bulk
912	Mutant lfy-12(flower)	0.73 >More info	0.03 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
913	harboring empty vector+CHX	0.73 >More info	0.03 >More info	harboring empty vector+DEX +CHX	10mM cycloheximide (CHX) 6hrs	whole seedlings	Original data	GEO bulk
914	Oxidative Stress 3 h (root)	0.73 >More info	0.03 >More info	Stress mock 3 h (root)			Original data	Stress treatments
915	WT Atum 1h	0.73 >More info	0.03 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
916	eds16 whole leaf 1dpi	0.73 >More info	0.03 >More info	Col whole leaf 1dpi		whole leaf	Original data	GEO bulk
917	wavy	0.73 >More info	0.03 >More info	WT			Original data	GEO bulk
918	anac017-1 water 3h	0.73 >More info	0.03 >More info	WT water 3h	3h_water		Original data	GEO bulk
919	Atss3 Light1	0.73 >More info	0.03 >More info	Atss3 Dark0.5			Original data	GEO bulk
920	root hypoxia pPEP	0.73 >More info	0.03 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
921	WT cold	0.73 >More info	0.03 >More info	WT warm	3 week cold	entire aerial part	Original data	GEO bulk
922	Col-0 low R/FR	0.73 >More info	0.03 >More info	Col-0 high R/FR	low R/FR	seedlings	Original data	GEO bulk
923	sdg2	0.73 >More info	0.03 >More info	wt		seedling	Original data	GEO bulk
924	hda9 dryseed	0.73 >More info	0.03 >More info	Col dryseed		dry seeds	Original data
925	eds16 laser microdissected 5 dpi	0.73 >More info	0.03 >More info	Col laser microdissected 5 dpi		LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
926	35S-MIF1 dark grown	0.73 >More info	0.03 >More info	Dark-grown WT control			Original data	GEO bulk
927	Cells whole embryo	0.73 >More info	0.03 >More info	Control for tissue data		whole embryo	Original data
928	NAA +AA	0.73 >More info	0.03 >More info	NAA -AA	B5 media supplemented with 4.5 µM NAA and treated with AA		Original data
929	atmyc2 Seedling Dark	0.73 >More info	0.03 >More info	WT Seedling Dark			Original data	GEO bulk
930	whole roots 140 mM NaCl 16 hour	0.73 >More info	0.03 >More info	whole roots standard			Original data	GEO bulk
931	hepta mutant (higher order mutant)	0.73 >More info	0.03 >More info	col control (higher order mutant)			Original data	GEO bulk
932	cca1-lhy 15m light	0.73 >More info	0.03 >More info	15m light		whole seedlings	Original data	GEO bulk
933	Starch sheath 2 days NAA	0.73 >More info	0.03 >More info	Starch sheath T0	Stem starch sheath under NAA in vitro treatment before cell divission	laser capture microdissection	Original data	GEO bulk
934	HS	0.73 >More info	0.03 >More info	noneHS			Original data	GEO bulk
935	Ws 2h KNO3	0.73 >More info	0.03 >More info	Ws 2h KCl	2 hours of 5 mM KNO3	Arabidopsis root	Original data	GEO bulk
936	Ws seedlings	0.73 >More info	0.03 >More info	ged1 seedlings			Original data	GEO bulk
937	Shoot apex vegetative	0.73 >More info	0.03 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
938	Shoot apex transition (before bolting)	0.73 >More info	0.03 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
939	GR::bZIP1 +CHX +N +DEX	0.73 >More info	0.03 >More info	GR::bZIP1 empty vector control +CHX +N +DEX	1 µM DEX in Ethanol		Original data
940	cat2-long-day 4d	0.73 >More info	0.03 >More info	Col0-LD4	transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
941	opr3 JA 22 h	0.73 >More info	0.03 >More info	opr3 0 h			Original data	GEO bulk
942	root epidermis and lateral root cap 40 mM NaCl	0.73 >More info	0.03 >More info	root epidermis and lateral root cap			Original data	GEO bulk
943	ARR22-ox (t-zeatin 3 h)	0.73 >More info	0.03 >More info	Col-0 (t-zeatin 3 h)			Original data	Cytokinin treatment of seedlings
944	roottip hypoxia pWOL	0.73 >More info	0.02 >More info	roottip hypoxia total			Original data	GEO bulk
945	atmospheric CO2 high Mg root	0.73 >More info	0.02 >More info	atmospheric CO2 normal Mg root		Root	Original data
946	Cotyledons	0.73 >More info	0.02 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
947	Col-0 0h NAA	0.73 >More info	0.02 >More info	Col-0 6h MOCK			Original data	GEO bulk
948	WT zebularine 5d	0.73 >More info	0.02 >More info	WT mock 5d		shoot apical meristem	Original data
949	intact root auxin	0.73 >More info	0.02 >More info	intact root control	5 uM indole-3-acetic acid	whole root	Original data	GEO bulk
950	Col-0 SA	0.73 >More info	0.02 >More info	Col-0 water		complete seedling	Original data
951	whole roots -Fe 72 hour	0.73 >More info	0.02 >More info	whole roots standard			Original data	GEO bulk
952	root hypoxia pWOL	0.73 >More info	0.02 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
953	NAA 6h	0.73 >More info	0.02 >More info	before treatment	NAA	root	Original data	GEO bulk
954	camta2/3 warm	0.73 >More info	0.02 >More info	WT warm		entire aerial part	Original data	GEO bulk
955	ACN1-2 Sucrose	0.73 >More info	0.02 >More info	Col-7 Sucrose			Original data	GEO bulk
956	seedling 6h after HZE WT	0.73 >More info	0.02 >More info	seedling day 1 unirradiated WT	6h		Original data
957	npr1 sni1 brca2a	0.73 >More info	0.02 >More info	npr1 sni1 water	water	seedling	Original data	GEO bulk
958	whole roots 140 mM NaCl 30 minutes	0.73 >More info	0.02 >More info	whole roots standard			Original data	GEO bulk
959	Genotoxic Stress 3 h (root)	0.73 >More info	0.02 >More info	Stress mock 3 h (root)			Original data	Stress treatments
960	pistil 3.5HAP	0.73 >More info	0.02 >More info	unpollinated pistil		pistil	Original data	GEO bulk
961	npr1 sni1 ssn2	0.73 >More info	0.02 >More info	npr1 sni1 water	water	seedling	Original data	GEO bulk
962	Distal half (leaf7)	0.73 >More info	0.02 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
963	R. solani AG2-1	0.73 >More info	0.02 >More info	control	Rhizoctonia solani AG2-1	whole seedling	Original data	GEO bulk
964	WT hypoxia	0.73 >More info	0.02 >More info	WT normoxia		whole rosette	Original data
965	HSP90 Reduced RNAi-C1	0.73 >More info	0.02 >More info	HSP90 Reduced Col-0 CS60000		All aerial tissue	Original data	GEO bulk
966	ANAC102 over-expressor	0.73 >More info	0.02 >More info	C24			Original data	GEO bulk
967	shoots WT 0uM Fe	0.73 >More info	0.02 >More info	shoots WT 100uM Fe	0uM Fe	shoots	Original data	GEO bulk
968	lug3 flowers	0.73 >More info	0.02 >More info	WT-flowers		flowers	Original data	GEO bulk
969	2 hr Hypoxia Total RNA	0.73 >More info	0.02 >More info	2 hr Non-Stress Total RNA		seedlings	Original data	GEO bulk
970	OE WRKY40.4	0.73 >More info	0.02 >More info	OE WRKY40.4	none	leaf	Original data	GEO bulk
971	ABA JA 24h	0.73 >More info	0.02 >More info	EtOH 24h	24hr		Original data	GEO bulk
972	ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark	0.73 >More info	0.02 >More info	ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark	2 h mock dark	seedling	Original data
973	seedling 3h after HZE WT	0.73 >More info	0.02 >More info	seedling day 1 unirradiated WT	3h		Original data
974	12 hour 7606596	0.73 >More info	0.02 >More info	12 hour control (no chemical )			Original data	GEO bulk
975	Fe starvation 72 h	0.73 >More info	0.02 >More info	Control			Original data	GEO bulk
976	root longitudinal zone-4 NaCl	0.73 >More info	0.02 >More info	root longitudinal zone-4			Original data	GEO bulk
977	SPT4-R3 seedlings0 DAS	0.73 >More info	0.02 >More info	Col-0 seedlings0 DAS		seedlings	Original data
978	npr1-3 DCA 48h	0.73 >More info	0.02 >More info	npr1-3 MOCK 48h			Original data	GEO bulk
979	Col-0 24hpi A. brassicicola	0.73 >More info	0.02 >More info	Col-0 24hpi mock		3rd-5th true leaves	Original data
980	(Col-0)+200 uM As	0.73 >More info	0.02 >More info	(Col-0)+0 uM As	treated with 200 uM As	Roots	Original data	GEO bulk
981	root hypoxia pRPL11C	0.73 >More info	0.02 >More info	root hypoxia total	hypoxia	root	Original data	GEO bulk
982	3 hour 7606596	0.73 >More info	0.02 >More info	3 hour control (no chemical )			Original data	GEO bulk
983	FLIGHT BRIC G PDFU-359 tissue	0.73 >More info	0.02 >More info	GROUND BRIC G PDFU-255 tissue		cultured cells	Original data
984	safener treated	0.73 >More info	0.02 >More info	Col0 mock	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
985	rao1-2	0.73 >More info	0.02 >More info	Col-Luc WT mock	water control treatment 3 hours	whole green tissue	Original data	GEO bulk
986	slr-1 0h NAA	0.73 >More info	0.02 >More info	Col-0 0h NAA			Original data	GEO bulk
987	whole roots -Fe	0.73 >More info	0.02 >More info	whole roots standard		Standard media transferred to -Fe media for 24 hours prior to harvesting tissue	Original data	GEO bulk
988	chl1-5 10mM NH4NO3	0.73 >More info	0.02 >More info	col 10mM NH4NO3		Root	Original data
989	sng1	0.73 >More info	0.02 >More info	WT		aerial region	Original data	GEO bulk
990	WT (Col-0) inflorescence moderate drought day 4	0.73 >More info	0.02 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
991	R. solani AG8	0.73 >More info	0.02 >More info	control	Rhizoctonia solani AG8	whole seedling	Original data	GEO bulk
992	Dark 40min pls UV-AB 5min	0.73 >More info	0.02 >More info	Dark 45 min			Original data	Light treatments
993	elevated CO2 high Mg shoot	0.73 >More info	0.02 >More info	atmospheric CO2 high Mg shoot		Shoot	Original data
994	root callus inducing medium 48 h	0.73 >More info	0.02 >More info	root callus inducing medium 0 h	48 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
995	Homozygous-AtcesA4	0.73 >More info	0.02 >More info	Heterozygous-AtcesA4		rosette	Original data	GEO bulk
996	embryo proper pre-globular	0.73 >More info	0.02 >More info	whole seed sections pre-globular			Original data	GEO bulk
997	osmotic 11day root	0.73 >More info	0.02 >More info	mock 10day root	osmotic	roots	Original data	GEO bulk
998	epfl4 epfl6	0.73 >More info	0.02 >More info	WT		developing inflorescence tips	Original data	GEO bulk
999	flowers	0.73 >More info	0.02 >More info	Control for tissue data			Original data	GEO bulk
1000	Col whole leaf 3dpi	0.73 >More info	0.02 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
1001	46T-CK	0.73 >More info	0.02 >More info	WT-CK	none		Original data
1002	Brz220 3 h	0.73 >More info	0.01 >More info	Mock 3 h			Original data	Effect of brassinosteroid inhibitors on seedlings
1003	A2hsfa1-ox in quadruple mutant	0.73 >More info	0.01 >More info	hsfa1 quadruple mutant		whole seedling	Original data	GEO bulk
1004	mbd11 mutant thaliana 10-day-old seedling	0.73 >More info	0.01 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
1005	ptpks2	0.73 >More info	0.01 >More info	Col-WT		leaves	Original data	GEO bulk
1006	Col in Pi deficiency medium	0.73 >More info	0.01 >More info	Col in control medium		root	Original data	GEO bulk
1007	Petiol (leaf7)	0.73 >More info	0.01 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1008	0h hml	0.73 >More info	0.01 >More info	0h wt			Original data
1009	root protoplasts 40 mM NaCl	0.73 >More info	0.01 >More info	whole roots 40 mM NaCl		protoplasting and FACS sorting	Original data	GEO bulk
1010	Atwrky63 high light	0.73 >More info	0.01 >More info	Col0 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
1011	ms1 unpollinated	0.73 >More info	0.01 >More info	WT 8h-pollinated		pistil	Original data	GEO bulk
1012	flower-buds	0.73 >More info	0.01 >More info	Control for tissue data			Original data	GEO bulk
1013	seedlings +5AC	0.73 >More info	0.01 >More info	control seedlings		10-day old whole seedling	Original data	GEO bulk
1014	whole seeds	0.73 >More info	0.01 >More info	Control for tissue data			Original data	GEO bulk
1015	osmotic 11day leaf	0.73 >More info	0.01 >More info	mock 10day leaf	osmotic	leaves	Original data	GEO bulk
1016	hira-root	0.73 >More info	0.01 >More info	WT-root		root	Original data
1017	root columella root cap 40 mM NaCl	0.73 >More info	0.01 >More info	root columella root cap			Original data	GEO bulk
1018	tfl1-1-23ºC	0.73 >More info	0.01 >More info	WT-23ºC			Original data	GEO bulk
1019	siliques WT hypoxia	0.73 >More info	0.01 >More info	siliques WT control	hypoxia	silique	Original data	GEO bulk
1020	rpoTmp(line) untreated	0.73 >More info	0.01 >More info	WT(Col0) untreated (control rpoTmp)		leaf	Original data
1021	CMP 4hr	0.73 >More info	0.01 >More info	Acetone 4hr		root	Original data	GEO bulk
1022	elevated CO2 low Mg root	0.73 >More info	0.01 >More info	atmospheric CO2 low Mg root		Root	Original data
1023	flower	0.73 >More info	0.01 >More info	Control for tissue data		flower	Original data	GEO bulk
1024	Root from tip to 130 mm proximal to tip (cut 4dpg)	0.73 >More info	0.01 >More info	Control for tissue data			Original data	GEO bulk
1025	3x(p)	0.73 >More info	0.01 >More info	2x		two week old seedlings	Original data
1026	A1-1	0.73 >More info	0.01 >More info	WT			Original data	GEO bulk
1027	camta1/2 warm	0.73 >More info	0.01 >More info	WT 24h cold		entire aerial part	Original data	GEO bulk
1028	Ws-2 high light	0.73 >More info	0.01 >More info	Ws-2 low light			Original data	GEO bulk
1029	rosettes atx drought	0.73 >More info	0.01 >More info	rosettes atx watered			Original data	GEO bulk
1030	Pst-DC3000(hrpA)-4hpi	0.73 >More info	0.01 >More info	Pst-DC3000-4hpi			Original data	GEO bulk
1031	CHLD reduction	0.73 >More info	0.01 >More info	Col-0 dex		green tissue	Original data	GEO bulk
1032	mARF10	0.73 >More info	0.01 >More info	Col-0			Original data	GEO bulk
1033	root longitudinal zone-1 low sulfur	0.73 >More info	0.01 >More info	root longitudinal zone-1 pH 5.7			Original data	GEO bulk
1034	GR::bZIP1 +CHX -N +DEX	0.73 >More info	0.01 >More info	empty vector control +CHX -N +DEX	1 µM DEX in Ethanol		Original data
1035	rao2 water 3h	0.73 >More info	0.01 >More info	WT water 3h	3h_water		Original data	GEO bulk
1036	BAM7-N Ox untreated	0.73 >More info	0.01 >More info	WT untreated	none	shoot	Original data
1037	camta1 root water	0.73 >More info	0.01 >More info	Col-0 root water		root	Original data	GEO bulk
1038	35S:RPS4 rrs1-11 T0	0.73 >More info	0.01 >More info	35S:RPS4 T0		leaves	Original data
1039	A. thaliana-A. halleri hybrid	0.73 >More info	0.01 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
1040	Nicotinamide-65hr	0.73 >More info	0.01 >More info	WT-untreated-65hr	nicotinamide	aerial tissue	Original data	GEO bulk
1041	C2H2 ZF TDNA mutant	0.73 >More info	0.01 >More info	Col-WT		mature pollen	Original data	GEO bulk
1042	WT (Col-0) inflorescence drought day 3	0.73 >More info	0.01 >More info	WT (Col-0) inflorescence well-watered day 3		Unopen flower buds	Original data	GEO bulk
1043	root longitudinal zone-3 pH 4.6	0.73 >More info	0.01 >More info	root longitudinal zone-3 pH 5.7			Original data	GEO bulk
1044	syd-2	0.73 >More info	0.01 >More info	Ler			Original data	GEO bulk
1045	oas-a1.1 shoot	0.73 >More info	0.01 >More info	WT-Untreated		Shoot	Original data	GEO bulk
1046	A. halleri	0.73 >More info	0.01 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
1047	roottip hypoxia p35S	0.73 >More info	0.01 >More info	roottip hypoxia total	hypoxia	roottip	Original data	GEO bulk
1048	CCA1-ox 12am total RNA	0.73 >More info	0.01 >More info	WT 12am total RNA		aerial part	Original data
1049	tbf1-mock infiltration	0.73 >More info	0.01 >More info	WT-mock infiltration	water for 2 hrs (infiltration into leaves)	mature leaf	Original data	GEO bulk
1050	plant (tga2-5-6) 4h control	0.73 >More info	0.00 >More info	plant (Col-0) 4h control			Original data	GEO bulk
1051	Wounding Stress3 h (root)	0.73 >More info	0.00 >More info	Stress mock 3 h (root)			Original data	Stress treatments
1052	pil5 red light	0.73 >More info	-0.00 >More info	Col-0 red light			Original data	GEO bulk
1053	ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hHypoxia+20&9;Reoxy	0.73 >More info	-0.00 >More info	ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hHypoxia+20&9;Reoxy	2 h hypoxia +2' reoxy	seedling	Original data
1054	Bud	0.73 >More info	0.00 >More info	Control for tissue data		pollen grains and tubes	Original data
1055	Inflorescences ler	0.73 >More info	-0.00 >More info	Control for tissue data		inflorescences	Original data	GEO bulk
1056	protoplasts T2 [flg22]	0.73 >More info	-0.00 >More info	protoplasts T2 [CPK]		mesophyll protoplasts	Original data	GEO bulk
1057	peripheral endosperm mature green	0.73 >More info	0.00 >More info	Control for tissue data		peripherial endosperm captured by LCM	Original data	GEO bulk
1058	Dark 1day hml	0.73 >More info	0.00 >More info	0h hml			Original data
1059	brat1	0.73 >More info	0.00 >More info	WT			Original data
1060	Nicotinamide-81hr	0.73 >More info	-0.00 >More info	WT-untreated-81hr	nicotinamide	aerial tissue	Original data	GEO bulk
1061	fil-8 yab3-2 yab5-1	0.73 >More info	0.00 >More info	wt		Apices	Original data	GEO bulk
1062	Shoot submergence 7h	0.73 >More info	-0.00 >More info	Shoot light control	7 h submergence in darkness	whole shoot	Original data	GEO bulk
1063	Ws 100mM NaCl	0.73 >More info	-0.00 >More info	Ws 0mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
1064	Col leaves 48h LT	0.73 >More info	-0.00 >More info	Col leaves 0h LT	48h	9-11th adult leaves	Original data
1065	LAS	0.73 >More info	0.00 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1066	SND1 12h	0.73 >More info	0.00 >More info	wt 12h			Original data	GEO bulk
1067	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	0.73 >More info	-0.00 >More info	Control for tissue data			Original data	GEO bulk
1068	anac017-2 water 3h	0.73 >More info	-0.00 >More info	WT water 3h	3h_water		Original data	GEO bulk
1069	17 2h total	0.73 >More info	-0.00 >More info	27 1h total	1.5mM 4SU added at h	whole seedlings floating on MS medium	Original data
1070	35S:GIF	0.73 >More info	0.00 >More info	Col-0		Apices from 20 day-old plants growth in shortdays	Original data
1071	Ws leaf 100mM NaCl	0.73 >More info	-0.00 >More info	Ws leaf 0mM NaCl		leaf	Original data	GEO bulk
1072	250uM K-nitrate 20min roots	0.73 >More info	0.00 >More info	250uM KCl 20min roots		Roots	Original data	GEO bulk
1073	Col-O low light	0.73 >More info	-0.00 >More info	Col-O bule light			Original data	GEO bulk
1074	hypoxic	0.73 >More info	0.00 >More info	WT aerobic	hypoxia		Original data	GEO bulk
1075	Inflorescences Trp1	0.73 >More info	0.00 >More info	Inflorescences ler		inflorescences	Original data	GEO bulk
1076	nhx5-1/nhx6	0.73 >More info	-0.00 >More info	WT		Rosette leaf	Original data	GEO bulk
1077	MYB29 OE	0.73 >More info	-0.00 >More info	WT for MYB29/76			Original data	GEO bulk
1078	shoot-10 μM DEX- 12 hr	0.73 >More info	0.00 >More info	shoot-10 μM DEX- 0 hr	SHR induction by DEX	whole shoot	Original data
1079	CHS-silenced type	0.73 >More info	-0.00 >More info	anthocyanin-producing revertants		total tissue	Original data	GEO bulk
1080	WT (Ler) CK200	0.73 >More info	-0.00 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
1081	OsTOP6A3 ox	0.73 >More info	-0.00 >More info	WT			Original data	GEO bulk
1082	SA 24h	0.73 >More info	0.00 >More info	EtOH 24h	24hr		Original data	GEO bulk
1083	SAM L-AOPP+IAA	0.73 >More info	0.00 >More info	SAM Mock		shoot apical meristem	Original data	GEO bulk
1084	UV	0.73 >More info	-0.00 >More info	WT		aerial region	Original data	GEO bulk
1085	Mutant tga2_5_6	0.73 >More info	0.00 >More info	Col-0			Original data	GEO bulk
1086	Root from tip to 130 mm proximal to tip (cut 8dpg)	0.73 >More info	0.00 >More info	Control for tissue data			Original data	GEO bulk
1087	2h KNO3 Whole root	0.73 >More info	-0.00 >More info	2h KCl control Whole root		Whole root	Original data	GEO bulk
1088	Fei-0-3h IAA	0.73 >More info	0.00 >More info	Fei-0-0h IAA		whole plant	Original data	GEO bulk
1089	MYB12OX	0.73 >More info	0.00 >More info	Col-0		aerial part	Original data
1090	PRR5-VP 6h light on	0.73 >More info	-0.00 >More info	WT 6h light on		whole plant	Original data	GEO bulk
1091	tZ	0.73 >More info	0.00 >More info	DMSO--WT	trans-zeatin	roots	Original data	GEO bulk
1092	Dark 1day wt	0.73 >More info	0.00 >More info	0h wt			Original data
1093	micropylar endosperm mature green	0.73 >More info	-0.00 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
1094	Anther	0.73 >More info	0.00 >More info	Control for tissue data		anther	Original data
1095	rosette leaves lcr	0.73 >More info	0.00 >More info	rosette leaves WT		Young rosette leaves 2mm to 1cm	Original data	GEO bulk
1096	low CO2 + dark	0.73 >More info	0.00 >More info	normal CO2 + light			Original data	GEO bulk
1097	Col-0 6h NAA	0.73 >More info	-0.00 >More info	Col-0 6h MOCK			Original data	GEO bulk
1098	agb1 gpa1 +ABA LF	0.73 >More info	0.00 >More info	Col-0 +ABA LF		Leaves of five week-old plants	Original data	GEO bulk
1099	control leaf (cmt 5d)	0.73 >More info	0.00 >More info	control leaf (WT 5d)		rosette leaf only	Original data	GEO bulk
1100	ubc13A -Fe	0.73 >More info	0.00 >More info	Col -Fe		root	Original data	GEO bulk
1101	pif5 low R/FR	0.73 >More info	-0.01 >More info	Col-0 low R/FR	low R/FR	seedlings	Original data	GEO bulk
1102	GV3101 3hpi	0.73 >More info	-0.01 >More info	Reference 3hpi		wounded inflorescence stalk segments	Original data	GEO bulk
1103	WT Atum 2h	0.73 >More info	-0.01 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
1104	seedling 6h after Gamma WT	0.73 >More info	-0.01 >More info	seedling day 1 unirradiated WT	6h		Original data
1105	6xX2x interploidy cross	0.73 >More info	-0.01 >More info	2xX2x cross			Original data	GEO bulk
1106	Mutant ap2-6(shoot apex)	0.73 >More info	-0.01 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
1107	RPL18 TuMV inoculated polysomal RNA	0.73 >More info	-0.01 >More info	mock inoculated polysomal RNA		PO	Original data	GEO bulk
1108	Apex BLS>>TCP4 14DAS	0.73 >More info	-0.01 >More info	Apex Col 14DAS			Original data	GEO bulk
1109	lateral nectary stage 11-12	0.73 >More info	-0.01 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
1110	CCA1-ox 6am small polysomal	0.73 >More info	-0.01 >More info	WT 6am small polysomal		aerial part	Original data
1111	myb61 xylem	0.73 >More info	-0.01 >More info	wt xylem		xylem	Original data	GEO bulk
1112	toc1-1-49hr	0.73 >More info	-0.01 >More info	WT-untreated-49hr	none	seedlings aerial tissue	Original data	GEO bulk
1113	amiR-ETP1/2	0.73 >More info	-0.01 >More info	Col-0 air			Original data	GEO bulk
1114	(Ws-2)+100 uM As	0.73 >More info	-0.01 >More info	(Ws-2)+0 uM As	treated with 100 uM As	Roots	Original data	GEO bulk
1115	CCA1-ox 12am large polysomal	0.73 >More info	-0.01 >More info	WT 12am large polysomal		aerial part	Original data
1116	Sucrose 90 mM 6h in dark	0.73 >More info	-0.01 >More info	AIR EXPERIMENT			Original data	GEO bulk
1117	17 0h total	0.73 >More info	-0.01 >More info	27 0h total		whole seedlings floating on MS medium	Original data
1118	elevated CO2 normal Mg shoot	0.73 >More info	-0.01 >More info	atmospheric CO2 normal Mg shoot		Shoot	Original data
1119	gpa1-4/agb1-2 ozone 3h	0.73 >More info	-0.01 >More info	Col ozone 3h	ozone		Original data	GEO bulk
1120	peripherial endosperm	0.73 >More info	-0.01 >More info	Control for tissue data			Original data	GEO bulk
1121	Col-O high light	0.73 >More info	-0.01 >More info	Col-O bule light			Original data	GEO bulk
1122	whole seeds heart stage	0.73 >More info	-0.01 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
1123	HSP90 Reduced Salk hsp90.3	0.73 >More info	-0.01 >More info	HSP90 Reduced Control		All aerial tissue	Original data	GEO bulk
1124	Dark 2day ivd	0.73 >More info	-0.01 >More info	0h ivd			Original data
1125	phyB mutant 16C 10hrs	0.73 >More info	-0.01 >More info	16C 10h		whole plant excluding roots	Original data	GEO bulk
1126	rdo2 siliques	0.73 >More info	-0.01 >More info	WT Ler siliques			Original data	GEO bulk
1127	shoot hypoxia pGL2	0.73 >More info	-0.01 >More info	shoot hypoxia total			Original data	GEO bulk
1128	CCA1-ox 6pm non-polysomal	0.73 >More info	-0.01 >More info	WT 6pm non-polysomal		aerial part	Original data
1129	17 2h labelled	0.73 >More info	-0.01 >More info	27 1h labelled	1.5mM 4SU added at h	whole seedlings floating on MS medium	Original data
1130	ANAC102 knock-out seeds low oxygen	0.73 >More info	-0.01 >More info	Col-0 seeds low oxygen			Original data	GEO bulk
1131	irradiated leaf (WT 5d)	0.73 >More info	-0.01 >More info	control leaf (WT 5d)		rosette leaf only	Original data	GEO bulk
1132	cct-1 mutant 9-day-old seedlings above-ground portions	0.73 >More info	-0.01 >More info	WT 7-day-old seedlings above-ground portions		seedling	Original data
1133	sid2-1 cold	0.73 >More info	-0.01 >More info	WT cold	3 week cold	entire aerial part	Original data	GEO bulk
1134	phyABDE 4-day dark- 2 hours Rc50	0.73 >More info	-0.01 >More info	phyABDE Dark	4-day dark growth followed by 2 hours of red light	whole seedling	Original data	GEO bulk
1135	seedling 1.5h after Gamma WT	0.73 >More info	-0.01 >More info	seedling day 1 unirradiated WT	1.5h		Original data
1136	MIL4 ox	0.73 >More info	-0.01 >More info	Col			Original data	GEO bulk
1137	atgsnor1-1-avrB-6h	0.73 >More info	-0.01 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
1138	IAA 3 h	0.73 >More info	-0.01 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
1139	vte2 leaves 0h LT	0.73 >More info	-0.01 >More info	Col leaves 0h LT	h	9-11th adult leaves	Original data
1140	green tissue gl3 egl3	0.73 >More info	-0.01 >More info	green tissue WT L. er			Original data	GEO bulk
1141	WR 35S 3h BL	0.73 >More info	-0.01 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1142	Col-0 shade	0.73 >More info	-0.01 >More info	Col-0 light		seedlings	Original data	GEO bulk
1143	ddm1 F6 inflorescence	0.73 >More info	-0.01 >More info	wt Col inflorescence		unopened flower buds	Original data
1144	4h decapitation	0.73 >More info	-0.01 >More info	axillary-buds-before-decapitation		axillary shoots	Original data	GEO bulk
1145	Laer MeJA 1h	0.73 >More info	-0.01 >More info	Laer Control		leaf discs	Original data	GEO bulk
1146	iron minus 1 h	0.73 >More info	-0.01 >More info	iron +1 h		root	Original data	GEO bulk
1147	LFYGR	0.73 >More info	-0.01 >More info	WT		shoot apices	Original data	GEO bulk
1148	phyB mutant 22C 10hrs	0.73 >More info	-0.01 >More info	L22-10hrs		whole plant excluding roots	Original data	GEO bulk
1149	eto1-4 +393	0.73 >More info	-0.01 >More info	eto1-4		whole seedling	Original data	GEO bulk
1150	AtHDA6(rts1-1) rts1-5	0.73 >More info	-0.01 >More info	null-mutant		whole plant	Original data	GEO bulk
1151	shoot control pSUC2	0.73 >More info	-0.01 >More info	shoot control total			Original data	GEO bulk
1152	FILp cells	0.73 >More info	-0.01 >More info	Protoplast Induced			Original data	GEO bulk
1153	17 2h unlabelled	0.73 >More info	-0.02 >More info	27 1h unlabelled	1.5mM 4SU added at h	whole seedlings floating on MS medium	Original data
1154	35S::TCP	0.73 >More info	-0.02 >More info	thaliana control		secondary inflorescence	Original data
1155	Col -Fe	0.73 >More info	-0.02 >More info	Col-es		root	Original data	GEO bulk
1156	roottip control pSCR	0.73 >More info	-0.02 >More info	roottip control total	control	roottip	Original data	GEO bulk
1157	myb5 mutant seed	0.73 >More info	-0.02 >More info	WT seed			Original data	GEO bulk
1158	dorn1-1 Root 100 mM ATP 30 min	0.73 >More info	-0.02 >More info	Col-0 Root 100 mM ATP 30 min		Roots of 5 day-old seedlings	Original data
1159	20h Col-0	0.73 >More info	-0.02 >More info	00h Col-0			Original data	GEO bulk
1160	seedling 12h after Gamma WT	0.73 >More info	-0.02 >More info	seedling day 1 unirradiated WT	12h		Original data
1161	low R/FR mock spray	0.73 >More info	-0.02 >More info	high R/FR mock spray	low R/FR mock spray		Original data	GEO bulk
1162	seedling 12h after Gamma atm-1	0.73 >More info	-0.02 >More info	seedling day 1 unirradiated atm-1	12h		Original data
1163	Col leaf 100mM NaCl	0.73 >More info	-0.02 >More info	Col leaf 0mM NaCl		leaf	Original data	GEO bulk
1164	Col leaf 100mM NaCl	0.73 >More info	-0.02 >More info	Col leaf 0mM NaCl		leaf	Original data	GEO bulk
1165	psae1-3 stn7-1	0.73 >More info	-0.02 >More info	WS		rosette leaves	Original data	GEO bulk
1166	seedling 12h after HZE WT	0.73 >More info	-0.02 >More info	seedling day 1 unirradiated WT	12h		Original data
1167	mutant acs2C (single mutant)	0.73 >More info	-0.02 >More info	col control (single mutant)			Original data	GEO bulk
1168	whole roots 140 mM NaCl 4 hour	0.73 >More info	-0.02 >More info	whole roots standard			Original data	GEO bulk
1169	Col 100mM NaCl	0.73 >More info	-0.02 >More info	Col 0mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
1170	camta1 leaf drought	0.73 >More info	-0.02 >More info	Col-0 leaf drought		leaf	Original data	GEO bulk
1171	pnp1-1 3h +P	0.73 >More info	-0.02 >More info	WT 3h +P	Full nutrient medium (+P)	seedlings without roots	Original data	GEO bulk
1172	NahG	0.73 >More info	-0.02 >More info	Col-0		Leaves	Original data	GEO bulk
1173	WT Root-Pi	0.73 >More info	-0.02 >More info	WT Root+Pi		roots	Original data	GEO bulk
1174	triplod male excess	0.73 >More info	-0.02 >More info	tetraploid			Original data	GEO bulk
1175	arr10 arr12	0.73 >More info	-0.02 >More info	DMSO--WT	DMSO	roots	Original data	GEO bulk
1176	rpoTmp(line) MLD stressed	0.73 >More info	-0.02 >More info	WT(Col0) MLD stressed (control rpoTmp)		leaf	Original data
1177	oxt6:AtCPSF30 line	0.73 >More info	-0.02 >More info	oxt6 mutant			Original data	GEO bulk
1178	silique	0.73 >More info	-0.02 >More info	Control for tissue data		silique	Original data	GEO bulk
1179	atr mitomycin C	0.73 >More info	-0.02 >More info	WT mitomycin C		shoot apical meristem	Original data
1180	cdpk6-yfp	0.73 >More info	-0.02 >More info	Kan		seedlings	Original data	GEO bulk
1181	ALC Toc1 light-dark EtOH	0.73 >More info	-0.02 >More info	Col light-dark EtOH	2.5% ethanol		Original data	GEO bulk
1182	SAM SE 35S:AGL15	0.73 >More info	-0.02 >More info	SAM SE Col			Original data	GEO bulk
1183	nar1-4/-	0.73 >More info	-0.02 >More info	WT		whole seedling	Original data	GEO bulk
1184	WT zebularine	0.73 >More info	-0.02 >More info	WT mock		shoot apical meristem	Original data
1185	plant (tga2-5-6) 4h phytoprostane A1	0.73 >More info	-0.02 >More info	plant (tga2-5-6) 4h control			Original data	GEO bulk
1186	Elevated CO2 AMPLE N DAY	0.73 >More info	-0.02 >More info	Ambient CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
1187	rGRF	0.73 >More info	-0.02 >More info	Col-0		Apices from 20 day-old plants growth in shortdays	Original data
1188	root cells cortex 140mM NaCl 48 hours	0.73 >More info	-0.02 >More info	root cells cortex standard 1 hour		root cells cortex	Original data
1189	Rsch CA	0.73 >More info	-0.02 >More info	Col CA		Leaves	Original data
1190	seedling 24h after Gamma atm-1	0.73 >More info	-0.02 >More info	seedling day 2 unirradiated atm-1	24h		Original data
1191	elevated CO2 low Mg shoot	0.73 >More info	-0.02 >More info	atmospheric CO2 low Mg shoot		Shoot	Original data
1192	root control pRPL11C	0.73 >More info	-0.02 >More info	root control total	control	root	Original data	GEO bulk
1193	pvip1 pvip2 seedling	0.73 >More info	-0.02 >More info	Col-0 seedling		seedling	Original data	GEO bulk
1194	root - 08% oxygen - 30min	0.73 >More info	-0.02 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
1195	long 17-degree-	0.73 >More info	-0.02 >More info	control long			Original data	GEO bulk
1196	tt4 UV	0.73 >More info	-0.02 >More info	UV		aerial region	Original data	GEO bulk
1197	Atape2 low light	0.73 >More info	-0.02 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1198	ATR1 OE	0.73 >More info	-0.02 >More info	WT for ATR1/MYB51			Original data	GEO bulk
1199	pmr5	0.73 >More info	-0.02 >More info	Col-0			Original data	GEO bulk
1200	CCA1-ox 6am total RNA	0.73 >More info	-0.02 >More info	WT 6am total RNA		aerial part	Original data
1201	WT +Pep2 10h	0.73 >More info	-0.02 >More info	WT untreated	Pep2		Original data	GEO bulk
1202	P.syringae vir 4 h (leaf)	0.73 >More info	-0.02 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
1203	WT (Col-0) inflorescence well-watered day 10	0.73 >More info	-0.02 >More info	WT (Col-0) inflorescence well-watered day 0		Unopen flower buds	Original data	GEO bulk
1204	35S::Zat12	0.73 >More info	-0.02 >More info	WT			Original data	GEO bulk
1205	ssi2 act1	0.73 >More info	-0.02 >More info	WT COL		leaves	Original data	GEO bulk
1206	nas4x leaves - Fe	0.73 >More info	-0.02 >More info	WT leaves - Fe		Leaves	Original data	GEO bulk
1207	4C 24h	0.73 >More info	-0.02 >More info	4C 0h			Original data	GEO bulk
1208	root callus inducing medium 24h	0.73 >More info	-0.02 >More info	root callus inducing medium 0 h	24 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
1209	ddm1 mutant seedlings	0.73 >More info	-0.02 >More info	control seedlings		10-day old whole seedling	Original data	GEO bulk
1210	WT seedlings IAA	0.73 >More info	-0.02 >More info	WT seedlings control		Seedlings	Original data	GEO bulk
1211	Cauline leaves	0.73 >More info	-0.02 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1212	Osmotic Stress 24 h (root)	0.73 >More info	-0.02 >More info	Stress mock 24 h (root)			Original data	Stress treatments
1213	leaf chr11-1chr17-1	0.73 >More info	-0.02 >More info	leaf Col-0		leaves	Original data	GEO bulk
1214	dsr1 SA Treated	0.73 >More info	-0.03 >More info	SA		Whole seedling	Original data	GEO bulk
1215	6h volatiles Sp. HRO-C48	0.73 >More info	-0.03 >More info	6h untreated		whole seedling	Original data	GEO bulk
1216	shoot-10 μM DEX- 3 hr	0.73 >More info	-0.03 >More info	shoot-10 μM DEX- 0 hr	SHR induction by DEX	whole shoot	Original data
1217	A6 mutant	0.73 >More info	-0.03 >More info	WT rosette leaves		Rosette leaves	Original data	GEO bulk
1218	35S:LOB-GR DEX	0.73 >More info	-0.03 >More info	Col DEX	dexamethasone	seedling	Original data	GEO bulk
1219	Atwrky63	0.73 >More info	-0.03 >More info	Col0	none	leaf	Original data	GEO bulk
1220	Whole root - low pH 6H	0.73 >More info	-0.03 >More info	Whole root - Std pH 6H	pH 4.6 for 6 hr		Original data	GEO bulk
1221	gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3	0.73 >More info	-0.03 >More info	ga-1 1 hr 100 uM GA3			Original data	GEO bulk
1222	ex1ex2flu dark 8hours/30 minute light	0.73 >More info	-0.03 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
1223	csn3-1 light	0.73 >More info	-0.03 >More info	WT light			Original data	GEO bulk
1224	Constans-mutant	0.73 >More info	-0.03 >More info	Col control		above-ground whole plant	Original data	GEO bulk
1225	35S:VND7-VP16-GR+DEX +CHX	0.73 >More info	-0.03 >More info	35S:VND7-VP16-GR+CHX	10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs	whole seedlings	Original data	GEO bulk
1226	mbd4 mutant thaliana 10-day-old seedling	0.73 >More info	-0.03 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
1227	KAN1	0.73 >More info	-0.03 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1228	root longitudinal zone-2 low sulfur	0.73 >More info	-0.03 >More info	root longitudinal zone-2 pH 5.7			Original data	GEO bulk
1229	cca1-lhy 60m light	0.73 >More info	-0.03 >More info	60m light		whole seedlings	Original data	GEO bulk
1230	chalazal endosperm	0.73 >More info	-0.03 >More info	Control for tissue data			Original data	GEO bulk
1231	Kin SA	0.73 >More info	-0.03 >More info	Col-0 SA			Original data	GEO bulk
1232	HairpinZ 4 h (leaf)	0.73 >More info	-0.03 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
1233	in vivo pollen tube	0.73 >More info	-0.03 >More info	Control for tissue data		pollen tube	Original data	GEO bulk
1234	ga1-3/brm-1	0.73 >More info	-0.03 >More info	wt		shoots	Original data	GEO bulk
1235	shoot-10 μM DEX- 24hr	0.73 >More info	-0.03 >More info	shoot-10 μM DEX- 0 hr	SHR induction by DEX	whole shoot	Original data
1236	spores of Gigaspora rosea	0.73 >More info	-0.03 >More info	Control			Original data	GEO bulk
1237	low R/FR JA spray	0.73 >More info	-0.03 >More info	high R/FR JA spray	low R/FR JA spray		Original data	GEO bulk
1238	seed germinating in countinuous light 48 h SL	0.73 >More info	-0.03 >More info	Control for tissue data		seed	Original data	GEO bulk
1239	php	0.73 >More info	-0.03 >More info	WT			Original data	GEO bulk
1240	sng1 UV	0.73 >More info	-0.03 >More info	UV		aerial region	Original data	GEO bulk
1241	mkk1 24h BTH rep	0.73 >More info	-0.03 >More info	Col-0 24h BTH rep			Original data	GEO bulk
1242	erf115ko roottip5days	0.73 >More info	-0.03 >More info	Col-0 roottip5days		root tips	Original data
1243	seedling 24h after Gamma WT	0.73 >More info	-0.03 >More info	seedling day 2 unirradiated WT	24h		Original data
1244	Rosette leaf No2	0.73 >More info	-0.03 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1245	WT cold	0.73 >More info	-0.03 >More info	WT control		All aerial tissue	Original data	GEO bulk
1246	NFA8 roots 2hr KNO3 nitrogen	0.73 >More info	-0.03 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
1247	WT tZ	0.73 >More info	-0.03 >More info	WT			Original data	GEO bulk
1248	seedling 12h after HZE atm-1	0.73 >More info	-0.03 >More info	seedling day 1 unirradiated atm-1	12h		Original data
1249	Dark 6h hml	0.73 >More info	-0.03 >More info	0h hml			Original data
1250	Seedling-HeatStressed POLYSOMESmRNA	0.73 >More info	-0.03 >More info	Seedling-control POLYSOMESmRNA		seedling	Original data
1251	general seed coat pre-globular	0.73 >More info	-0.03 >More info	whole seed sections pre-globular			Original data	GEO bulk
1252	dense canopy	0.73 >More info	-0.03 >More info	single (control)		petiole	Original data	GEO bulk
1253	OH1	0.73 >More info	-0.03 >More info	Col-0		leaves	Original data	GEO bulk
1254	seed freshly harvested H	0.73 >More info	-0.03 >More info	Control for tissue data		seed	Original data	GEO bulk
1255	Cambium 5 days NAA	0.73 >More info	-0.03 >More info	Stem tissue T0	Interfascicular cambium induced after 5 days NAA in vitro treatment	laser capture microdissection	Original data	GEO bulk
1256	HDG4	0.73 >More info	-0.03 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1257	Salicylic Acid 3 h	0.73 >More info	-0.03 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
1258	se-1	0.73 >More info	-0.03 >More info	Col-0		vegetative apex	Original data	GEO bulk
1259	QC pSCR 0h BL	0.73 >More info	-0.03 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1260	CCA1-ox 12am small polysomal	0.73 >More info	-0.03 >More info	WT 12am small polysomal		aerial part	Original data
1261	rosette leaves bdg	0.73 >More info	-0.03 >More info	rosette leaves WT		Young rosette leaves 2mm to 1cm	Original data	GEO bulk
1262	cpctry	0.73 >More info	-0.03 >More info	Col			Original data	GEO bulk
1263	plant (Col-0) 4h phytoprostane A1	0.73 >More info	-0.03 >More info	plant (tga2-5-6) 4h control			Original data	GEO bulk
1264	6 h SL Attim 17-1 1	0.73 >More info	-0.03 >More info	0 h Attim 17-1 1		seed	Original data
1265	Mutant ga1-5	0.73 >More info	-0.03 >More info	Ler-1			Original data	Comparison of plant hormone related mutant
1266	6h +Pi	0.73 >More info	-0.03 >More info	6h -Pi		root	Original data	GEO bulk
1267	QC pSCR(QC pSCRBRI1) 0h BL	0.73 >More info	-0.03 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1268	ged1 seedlings	0.73 >More info	-0.03 >More info	Ws seedlings			Original data	GEO bulk
1269	35S:MYB28 like miR	0.73 >More info	-0.04 >More info	WT for miR			Original data	GEO bulk
1270	4C 7d	0.73 >More info	-0.04 >More info	4C 0h			Original data	GEO bulk
1271	short 10-degree-	0.73 >More info	-0.04 >More info	control short			Original data	GEO bulk
1272	Root -P	0.73 >More info	-0.04 >More info	Root Mock	P_starvation 10-day Phosphate starvation		Original data	GEO bulk
1273	root callus inducing medium 12 h	0.73 >More info	-0.04 >More info	root callus inducing medium 0 h	12 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
1274	Kas2 roots 2hr KNO3 nitrogen	0.73 >More info	-0.04 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
1275	ADD3	0.73 >More info	-0.04 >More info	WT		aerial part	Original data	GEO bulk
1276	Total RNA csp1 cold	0.73 >More info	-0.04 >More info	Total RNA csp1	12h cold (4C)	rosettes	Original data	GEO bulk
1277	Cd 18h root	0.73 >More info	-0.04 >More info	WT-Untreated		Root	Original data	GEO bulk
1278	upf1	0.73 >More info	-0.04 >More info	WT		whole plant	Original data	GEO bulk
1279	seedling 24h after HZE WT	0.73 >More info	-0.04 >More info	seedling day 2 unirradiated WT	24h		Original data
1280	nhx6	0.73 >More info	-0.04 >More info	WT		Rosette leaf	Original data	GEO bulk
1281	calcicole ecotype Cal-0	0.73 >More info	-0.04 >More info	Col-4	1 mM CaCl2		Original data	GEO bulk
1282	dark-hs	0.73 >More info	-0.04 >More info	dark-control		seedling	Original data
1283	chalazal endosperm mature green	0.73 >More info	-0.04 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
1284	rosettes drought	0.73 >More info	-0.04 >More info	rosettes watered			Original data	GEO bulk
1285	Flowers stage15	0.73 >More info	-0.04 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1286	arf2 mock	0.73 >More info	-0.04 >More info	Col mock			Original data	GEO bulk
1287	pmr5 pmr6	0.73 >More info	-0.04 >More info	Col-0			Original data	GEO bulk
1288	CCA1-ox 6pm total RNA	0.73 >More info	-0.04 >More info	WT 6pm total RNA		aerial part	Original data
1289	bak1-3 +Pep2 2h	0.73 >More info	-0.04 >More info	WT +Pep2 2h	Pep2		Original data	GEO bulk
1290	BI-1-3h IAA	0.73 >More info	-0.04 >More info	BI-1-0h IAA		whole plant	Original data	GEO bulk
1291	agp6 agp11 pollen tube	0.73 >More info	-0.04 >More info	WT pollen tube		pollen tube	Original data	GEO bulk
1292	ams	0.73 >More info	-0.04 >More info	WT		anther	Original data	GEO bulk
1293	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)	0.73 >More info	-0.04 >More info	Control for tissue data			Original data	GEO bulk
1294	eds16 whole leaf 3dpi	0.73 >More info	-0.04 >More info	Col whole leaf 3dpi		whole leaf	Original data	GEO bulk
1295	24h SL Attim 17-1 1	0.73 >More info	-0.04 >More info	0 h Attim 17-1 1		seed	Original data
1296	12h Col-0	0.73 >More info	-0.04 >More info	00h Col-0			Original data	GEO bulk
1297	pkl Mutant mock	0.73 >More info	-0.04 >More info	WT mock			Original data	GEO bulk
1298	Mutant arf2 (etiol)	0.73 >More info	-0.04 >More info	Col (etiol)			Original data	GEO bulk
1299	Ts5 roots 2hr KCl control	0.73 >More info	-0.04 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
1300	Col-0 ozone	0.73 >More info	-0.04 >More info	Col-0 ctrl	350 ppb ozone exposure for 2hr	whole rosette	Original data
1301	roottip control pSHR	0.73 >More info	-0.04 >More info	roottip control total	control	roottip	Original data	GEO bulk
1302	AsAKiin11 T2	0.73 >More info	-0.04 >More info	C2 C2del and (As)AKiin11 control T2	two days post infusion with Agrobacterium containing antisense (As)AKiin11	Arabidopsis rosette leaves	Original data
1303	Dark 2day hml	0.73 >More info	-0.04 >More info	0h hml			Original data
1304	16h Col-0	0.73 >More info	-0.04 >More info	00h Col-0			Original data	GEO bulk
1305	aox1a(line) MLD stressed	0.73 >More info	-0.04 >More info	WT(Col0) MLD stressed (control aox1a)		leaf	Original data
1306	WT (Col-0) inflorescence well-watered day 4	0.73 >More info	-0.04 >More info	WT (Col-0) inflorescence well-watered day 0		Unopen flower buds	Original data	GEO bulk
1307	WR 35S 8h BL	0.73 >More info	-0.04 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1308	whole roots 140 mM NaCl 32 hour	0.73 >More info	-0.04 >More info	whole roots standard			Original data	GEO bulk
1309	Col whole leaf amplified 5 dpi	0.73 >More info	-0.04 >More info	Col whole leaf amplified 5d UI		whole leaf	Original data	GEO bulk
1310	P-chlorophenoxy- isobutyric acid 3 h	0.73 >More info	-0.04 >More info	Mock 3 h			Original data	Effect of auxin inhibitors on seedlings
1311	ulp1c ulp1d	0.73 >More info	-0.04 >More info	col			Original data	GEO bulk
1312	inhibitor B Treated	0.73 >More info	-0.04 >More info	Negative Control			Original data	GEO bulk
1313	Heat shock 30%Inhibition	0.73 >More info	-0.04 >More info	Heat shock baseline	Photosynthesis at 30% inhibition from optimum	leaf first fully expanded	Original data	GEO bulk
1314	gun5 control	0.73 >More info	-0.04 >More info	Col-0 control			Original data	GEO bulk
1315	light-hs	0.73 >More info	-0.04 >More info	light-control		seedling	Original data
1316	swn-7	0.73 >More info	-0.04 >More info	Col		whole plant	Original data	GEO bulk
1317	2hr continuous KCl and MSX control PeR cell	0.73 >More info	-0.04 >More info	2hr KCl control PeR cell		Pericycle root cells	Original data	GEO bulk
1318	AVG 3 h	0.73 >More info	-0.04 >More info	Mock 3 h			Original data	Effect of ethylene inhibitors on seedlings
1319	HRE1-RNAi20 normoxia	0.73 >More info	-0.04 >More info	Col upon normoxia	normoxia	seedling roots	Original data	GEO bulk
1320	ckh1 CK25	0.73 >More info	-0.04 >More info	WT (Ler) CK25	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
1321	A. halleri control-leaf	0.73 >More info	-0.05 >More info	A. petraea control-leaf			Original data	GEO bulk
1322	Mh0 UV	0.73 >More info	-0.05 >More info	Mh0 mock	UV	seedling	Original data
1323	6 h SL WT	0.73 >More info	-0.05 >More info	0 h WT		seed	Original data
1324	rosette Dark Wounded	0.73 >More info	-0.05 >More info	rosette Dark Control			Original data	GEO bulk
1325	Phytoprostane A1 4 h	0.73 >More info	-0.05 >More info	Col-0			Original data	GEO bulk
1326	piffq FR 1h	0.73 >More info	-0.05 >More info	WT FR 1h		whole seedling	Original data	GEO bulk
1327	shoot hypoxia total	0.73 >More info	-0.05 >More info	shoot control total			Original data	GEO bulk
1328	root cap pGL2 0h BL	0.73 >More info	-0.05 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1329	Shoot dark control 7h	0.73 >More info	-0.05 >More info	Shoot light control	7 h non-submerged dark condition	whole shoot	Original data	GEO bulk
1330	plant (Col-0) 4h OPDA	0.73 >More info	-0.05 >More info	plant (Col-0) 4h control			Original data	GEO bulk
1331	root BA 12h	0.73 >More info	-0.05 >More info	root control 12h	boron (5mM)	root	Original data	GEO bulk
1332	gapcp1gapcp2 ABA	0.73 >More info	-0.05 >More info	WT ABA	ABA	seedling	Original data	GEO bulk
1333	mil4	0.73 >More info	-0.05 >More info	Col		rosettes	Original data	GEO bulk
1334	0.2µM SMX	0.73 >More info	-0.05 >More info	control		Whole seedling	Original data	GEO bulk
1335	sid2-2 24hpi A. brassicicola	0.73 >More info	-0.05 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
1336	shoot hypoxia p35S	0.73 >More info	-0.05 >More info	shoot hypoxia total			Original data	GEO bulk
1337	Nicotinamide-93hr	0.73 >More info	-0.05 >More info	WT-untreated-93hr	nicotinamide	aerial tissue	Original data	GEO bulk
1338	Dry midnight	0.73 >More info	-0.05 >More info	Wet midnight	water-limited	whole rosette	Original data	GEO bulk
1339	WT (Ler) TSA	0.73 >More info	-0.05 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA.	tissue culture	Original data	GEO bulk
1340	Heat and anoxia	0.73 >More info	-0.05 >More info	Control	treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark.		Original data	GEO bulk
1341	Shoot dark control 24h	0.73 >More info	-0.05 >More info	Shoot light control	24 h non-submerged dark condition	whole shoot	Original data	GEO bulk
1342	Dry late day	0.73 >More info	-0.05 >More info	Wet late day	water-limited	whole rosette	Original data	GEO bulk
1343	stele pSHR 0h BL	0.73 >More info	-0.05 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1344	tmm1-inflorescence-tips	0.73 >More info	-0.05 >More info	Col gl1-inflorescence-tips		inflorescence tip	Original data	GEO bulk
1345	empty vector IAA Treated	0.73 >More info	-0.05 >More info	empty vector mock			Original data	GEO bulk
1346	cat2-long-day 2d	0.73 >More info	-0.05 >More info	Col0-LD2	transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
1347	tga2 tga5 tga6 ozone	0.73 >More info	-0.05 >More info	Col-0 ozone- (control genotype tga2 tag5 tga6)	350 ppb ozone exposure for 2hr		Original data
1348	CCA1-ox 12pm non-polysomal	0.73 >More info	-0.05 >More info	WT 12pm non-polysomal		aerial part	Original data
1349	Nicotinamide-89hr	0.73 >More info	-0.05 >More info	WT-untreated-89hr	nicotinamide	aerial tissue	Original data	GEO bulk
1350	COL-0-Fe--root	0.73 >More info	-0.05 >More info	COL-0-Ctrl--root		root	Original data
1351	Col whole leaf 5 dpi	0.73 >More info	-0.05 >More info	Col whole leaf 5d UI		whole leaf	Original data	GEO bulk
1352	seed during stratification 12 h S	0.73 >More info	-0.05 >More info	Control for tissue data		seed	Original data	GEO bulk
1353	WT 3h -P	0.73 >More info	-0.05 >More info	WT 3h +P	No phosphate medium	seedlings without roots	Original data	GEO bulk
1354	gun1-1 -lincomycin	0.73 >More info	-0.05 >More info	Col-0 -lincomycin			Original data	GEO bulk
1355	chl1-5 untreated	0.73 >More info	-0.05 >More info	WT untreated			Original data	GEO bulk
1356	HARAP hypoxic	0.73 >More info	-0.05 >More info	hypoxic	hypoxia		Original data	GEO bulk
1357	Mutant nph4-1 (IAA)	0.73 >More info	-0.05 >More info	Col (IAA)			Original data	GEO bulk
1358	OPDA 4 h	0.73 >More info	-0.05 >More info	Col-0			Original data	GEO bulk
1359	edr1 96 h powdery mildew	0.73 >More info	-0.05 >More info	Col-0 96 h powdery mildew			Original data	GEO bulk
1360	npr1 sni1 SA	0.73 >More info	-0.05 >More info	npr1 sni1 water	salicylic acid	seedling	Original data	GEO bulk
1361	aux1 mutant roots air	0.73 >More info	-0.05 >More info	roots IAA			Original data	GEO bulk
1362	Apex mir-3TCP 14DAS	0.73 >More info	-0.05 >More info	Apex Col 14DAS			Original data	GEO bulk
1363	coi1-16 ein2 sid2 ozone	0.73 >More info	-0.05 >More info	coi1-16 ein2 sid2 ctrl	350 ppb ozone exposure for 2hr		Original data
1364	tor mutant glucose	0.73 >More info	-0.05 >More info	WT (Col) glucose	glucose	seedlings	Original data	GEO bulk
1365	Stem wox4	0.73 >More info	-0.05 >More info	Stem Col		first internode of stem	Original data	GEO bulk
1366	iae1	0.73 >More info	-0.05 >More info	B179			Original data	GEO bulk
1367	9 hr Hypoxia 1 hr recovery IP RNA	0.73 >More info	-0.05 >More info	9 hr Non-Stress IP RNA		seedlings	Original data	GEO bulk
1368	HMG	0.73 >More info	-0.05 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1369	atmospheric CO2 low Mg root	0.73 >More info	-0.05 >More info	atmospheric CO2 normal Mg root		Root	Original data
1370	HSP90 Reduced RNAi-A2	0.73 >More info	-0.05 >More info	HSP90 Reduced Col-0 CS60000		All aerial tissue	Original data	GEO bulk
1371	leaf blade in FRD	0.73 >More info	-0.05 >More info	leaf blade in WL		leaf blades	Original data	GEO bulk
1372	CCA1-ox 12am non-polysomal	0.73 >More info	-0.05 >More info	WT 12am non-polysomal		aerial part	Original data
1373	rcf1-1 cold 0h	0.73 >More info	-0.05 >More info	WT cold 0h	Control	seedlings	Original data	GEO bulk
1374	seed during stratification 1 h S	0.73 >More info	-0.05 >More info	Control for tissue data		seed	Original data	GEO bulk
1375	pft1 16C	0.73 >More info	-0.05 >More info	WT 16C		seedling	Original data	GEO bulk
1376	Dark 6h wt	0.73 >More info	-0.05 >More info	0h wt			Original data
1377	micropylar endosperm pre-globular	0.73 >More info	-0.06 >More info	whole seed sections pre-globular			Original data	GEO bulk
1378	4C 24h(SOIL)	0.73 >More info	-0.06 >More info	4C 0h(SOIL)			Original data	GEO bulk
1379	Bay-0-3h IAA	0.73 >More info	-0.06 >More info	Bay-0-0h IAA		whole plant	Original data	GEO bulk
1380	ice1 control	0.73 >More info	-0.06 >More info	WT control			Original data	GEO bulk
1381	root cap pGL2(root cap pGL2BRI1) 3h BL	0.73 >More info	-0.06 >More info	root cap pGL2(root cap pGL2BRI1) 0h BL	brassinosteroid	root	Original data
1382	WT seedlings MV	0.73 >More info	-0.06 >More info	WT seedlings control		Seedlings	Original data	GEO bulk
1383	8hr-pH4.5	0.73 >More info	-0.06 >More info	8hr-pH6	8hr pH 4.5	roots	Original data	GEO bulk
1384	Root -Cs	0.73 >More info	-0.06 >More info	Control-root			Original data	GEO bulk
1385	WT 24h cold	0.73 >More info	-0.06 >More info	WT warm	24h cold	entire aerial part	Original data	GEO bulk
1386	Col-0 ozone- (control genotype coi1-16 ein2 sid2)	0.73 >More info	-0.06 >More info	Col-0 ctrl (control genotype coi1-16 ein2 sid2)	350 ppb ozone exposure for 2hr		Original data
1387	CCA1-ox 12pm total RNA	0.73 >More info	-0.06 >More info	WT 12pm total RNA		aerial part	Original data
1388	IAA7mII over-expressor mock	0.73 >More info	-0.06 >More info	empty vector mock			Original data	GEO bulk
1389	4h pollen tube	0.73 >More info	-0.06 >More info	drypollen		in vitro-grown pollen tubes	Original data	GEO bulk
1390	Full AC2 T1	0.73 >More info	-0.06 >More info	AC2 and AC2del control T1	one day post infusion with Agrobacterium containing full-length CaLCuV AC2	Arabidopsis rosette leaves	Original data
1391	roottip control p35S	0.73 >More info	-0.06 >More info	roottip control total	control	roottip	Original data	GEO bulk
1392	sfr3 cold	0.73 >More info	-0.06 >More info	WT cold		All aerial tissue	Original data	GEO bulk
1393	root cap pGL2(root cap pGL2BRI1) 0h BL	0.73 >More info	-0.06 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1394	CCA1-ox 6am large polysomal	0.73 >More info	-0.06 >More info	WT 6am large polysomal		aerial part	Original data
1395	4xX2x interploidy cross	0.73 >More info	-0.06 >More info	2xX2x cross			Original data	GEO bulk
1396	S58-2	0.73 >More info	-0.06 >More info	wt			Original data	GEO bulk
1397	Kin	0.73 >More info	-0.06 >More info	Col-0			Original data	GEO bulk
1398	smg5-2	0.73 >More info	-0.06 >More info	WT		whole plant	Original data	GEO bulk
1399	Cvi SA	0.73 >More info	-0.06 >More info	Col-0 SA			Original data	GEO bulk
1400	Col-0 HS	0.73 >More info	-0.06 >More info	Col-0 control	heat shocked	seedling	Original data	GEO bulk
1401	Mutant ap1-15(shoot apex)	0.73 >More info	-0.06 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
1402	lec1-1 Cotyledon Stage Seed	0.73 >More info	-0.06 >More info	Control for tissue data			Original data	GEO bulk
1403	B5 +AA	0.73 >More info	-0.06 >More info	B5 -AA	B5 media and treated with AA		Original data
1404	ago4-1	0.73 >More info	-0.06 >More info	WT La-er		whole plants	Original data	GEO bulk
1405	Mutant siz1-3	0.73 >More info	-0.06 >More info	Col-0			Original data	GEO bulk
1406	24h SL WT	0.73 >More info	-0.06 >More info	0 h WT		seed	Original data
1407	Col(gl) leaf 100mM NaCl	0.73 >More info	-0.06 >More info	Col leaf 100mM NaCl		leaf	Original data	GEO bulk
1408	WT (Col-0) heat shock	0.73 >More info	-0.06 >More info	WT (Col-0)		whole seedling	Original data	GEO bulk
1409	PsJN	0.73 >More info	-0.06 >More info	Control	inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN	Plantlet	Original data	GEO bulk
1410	penta Pst DC3000 12hpi	0.73 >More info	-0.06 >More info	Laer Pst DC3000 12hpi		leaf discs	Original data	GEO bulk
1411	C24 ozone	0.73 >More info	-0.06 >More info	C24 ctrl	350 ppb ozone exposure for 2hr	whole rosette	Original data
1412	ckh1 CK200	0.73 >More info	-0.06 >More info	WT (Ler) CK200	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
1413	ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight	0.73 >More info	-0.06 >More info	ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight	2 h light	seedling	Original data
1414	ANAC102 knock-out	0.73 >More info	-0.06 >More info	Col-0			Original data	GEO bulk
1415	sex4-3	0.73 >More info	-0.06 >More info	Col-WT		leaves	Original data	GEO bulk
1416	camta1 leaf water	0.73 >More info	-0.06 >More info	Col-0 leaf water		leaf	Original data	GEO bulk
1417	Col whole leaf 6hpi	0.73 >More info	-0.06 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
1418	8-DAC chr11-1chr17-1	0.73 >More info	-0.06 >More info	8-DAC Col-0		leaf explants	Original data
1419	siz1-3 control	0.73 >More info	-0.06 >More info	Col-0 control			Original data	GEO bulk
1420	ahg3-1	0.73 >More info	-0.06 >More info	ABA control			Original data	GEO bulk
1421	shl-2 Pool	0.73 >More info	-0.06 >More info	Ler Pool		seedling	Original data	GEO bulk
1422	Total RNA 35S:HF-RPL18 cold	0.73 >More info	-0.06 >More info	Total RNA csp1 cold	12h cold (4C)	rosettes	Original data	GEO bulk
1423	dry seed 0 h	0.73 >More info	-0.06 >More info	Control for tissue data		seed	Original data	GEO bulk
1424	AAF-OX	0.73 >More info	-0.06 >More info	Col-0		Rosette leaf	Original data	GEO bulk
1425	xyl-grown cell culture- 1h 1mM Fru	0.73 >More info	-0.06 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
1426	csn5 (csn5a-2 csn5b) light	0.73 >More info	-0.06 >More info	WT light			Original data	GEO bulk
1427	08h Col-0	0.73 >More info	-0.06 >More info	00h Col-0			Original data	GEO bulk
1428	35S:RPS4 eds1-2 T0	0.73 >More info	-0.06 >More info	35S:RPS4 T0		leaves	Original data
1429	WT+sucrose	0.73 >More info	-0.06 >More info	WT+no sugars		rosette leaves	Original data	GEO bulk
1430	Col(gl) 100mM NaCl	0.73 >More info	-0.06 >More info	Col 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
1431	short 17-degree-	0.73 >More info	-0.06 >More info	control short			Original data	GEO bulk
1432	AtMYB30-ox T0	0.73 >More info	-0.06 >More info	WT T0			Original data	GEO bulk
1433	ABA 24h	0.73 >More info	-0.06 >More info	EtOH 24h	24hr		Original data	GEO bulk
1434	C58 3hpi	0.73 >More info	-0.06 >More info	Reference 3hpi		wounded inflorescence stalk segments	Original data	GEO bulk
1435	3 hour 5929745	0.73 >More info	-0.06 >More info	3 hour control (no chemical )			Original data	GEO bulk
1436	KAN1-GR 30min	0.73 >More info	-0.06 >More info	KAN1-GR 0min			Original data	GEO bulk
1437	SCR-GR Time 3H Dex	0.73 >More info	-0.06 >More info	SCR-GR Time 0H Dex	Dex media for 3 hours		Original data	GEO bulk
1438	G3P	0.73 >More info	-0.06 >More info	Mock		distal leaves	Original data	GEO bulk
1439	PRR5-VP 18h light on	0.73 >More info	-0.06 >More info	WT 18h light on		whole plant	Original data	GEO bulk
1440	FAMA induced 48h	0.73 >More info	-0.07 >More info	control 48h		Whole seedling	Original data	GEO bulk
1441	protoplasts T0 [flg22]	0.73 >More info	-0.07 >More info	protoplasts T0 [CPK]		mesophyll protoplasts	Original data	GEO bulk
1442	Col-0 2HS	0.73 >More info	-0.07 >More info	Col-0NS	2 h hypoxia stress (2HS)	7-day-old seedlings	Original data
1443	Seeds stage8 w/o siliques	0.73 >More info	-0.07 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1444	Ler 10C long-day	0.73 >More info	-0.07 >More info	Ler 20C long-day		seeds	Original data	GEO bulk
1445	Salt Stress 24 h (shoot)	0.73 >More info	-0.07 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
1446	WT (Col-0) inflorescence drought day 5	0.73 >More info	-0.07 >More info	WT (Col-0) inflorescence well-watered day 5		Unopen flower buds	Original data	GEO bulk
1447	WT drought	0.73 >More info	-0.07 >More info	WT control		All aerial tissue	Original data	GEO bulk
1448	ORS1 induced	0.73 >More info	-0.07 >More info	mock-induced		rosette leaves	Original data	GEO bulk
1449	GO5; 0h switch to ambient CO2 concentrations;	0.73 >More info	-0.07 >More info	WT; 0h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
1450	AtMYB30-ox 2-4h Xanthomonas	0.73 >More info	-0.07 >More info	WT 2-4h Xanthomonas			Original data	GEO bulk
1451	met1-3 fourth-selfed generation	0.73 >More info	-0.07 >More info	Col WT		leaf	Original data	GEO bulk
1452	Full C2 T2	0.73 >More info	-0.07 >More info	C2 C2del and (As)AKiin11 control T2	two days post infusion with Agrobacterium containing full-length SCTV C2	Arabidopsis rosette leaves	Original data
1453	35S::HRE2 Aerobic	0.73 >More info	-0.07 >More info	Col-0 wt Aerobic	untreated control		Original data	GEO bulk
1454	penta Flg22 2h	0.73 >More info	-0.07 >More info	Laer Flg22 2h		leaf discs	Original data	GEO bulk
1455	FOX line K16331	0.73 >More info	-0.07 >More info	empty vector control (T3) FOX lines			Original data	GEO bulk
1456	msh1 variegation Col-0	0.73 >More info	-0.07 >More info	WT Col-0		above ground part of plant	Original data	GEO bulk
1457	ein3 eil1 JA	0.73 >More info	-0.07 >More info	JA		Whole seedling	Original data	GEO bulk
1458	Nicotinamide-49hr	0.73 >More info	-0.07 >More info	WT-untreated-49hr	nicotinamide	aerial tissue	Original data	GEO bulk
1459	IAA 1h	0.73 >More info	-0.07 >More info	control 1h		root	Original data	GEO bulk
1460	chalazal seed coat pre-globular	0.73 >More info	-0.07 >More info	whole seed sections pre-globular			Original data	GEO bulk
1461	4C 1h	0.73 >More info	-0.07 >More info	22C 1h			Original data	GEO bulk
1462	rosettes WT drought	0.73 >More info	-0.07 >More info	rosettes WT watered			Original data	GEO bulk
1463	35S:LOB-GR mock	0.73 >More info	-0.07 >More info	Col mock	mock	seedling	Original data	GEO bulk
1464	root columella root cap pH4.6	0.73 >More info	-0.07 >More info	root columella root cap pH5.7			Original data	GEO bulk
1465	Mutant siz1-3 (Drought)	0.73 >More info	-0.07 >More info	Col-0 (Drought)			Original data	GEO bulk
1466	1.5 hr ammonium	0.73 >More info	-0.07 >More info	immediately prior to nitrogen addtion		roots from hydroponically grown plants	Original data	GEO bulk
1467	Drought Stress 24 h (shoot)	0.73 >More info	-0.07 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
1468	BAM8-Lig Ox untreated	0.73 >More info	-0.07 >More info	WT untreated	none	shoot	Original data
1469	Col-0 flu HL 3h	0.73 >More info	-0.07 >More info	Col-0 WT HL 3h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
1470	Truncated AC2 T1	0.73 >More info	-0.07 >More info	AC2 and AC2del control T1	one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2	Arabidopsis rosette leaves	Original data
1471	anti-sense for AtAOX1a	0.73 >More info	-0.07 >More info	WT			Original data	GEO bulk
1472	Mt	0.73 >More info	-0.07 >More info	Col-0			Original data	GEO bulk
1473	lateral root cap-columella pBRN2 0h BL	0.73 >More info	-0.07 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
1474	+GA-30mins	0.73 >More info	-0.07 >More info	-30mins		whole plant	Original data	GEO bulk
1475	Pseudomonas	0.73 >More info	-0.07 >More info	Control	pseudomonas treated	whole seedling	Original data	GEO bulk
1476	IAA 0h	0.73 >More info	-0.07 >More info	control 0h		root	Original data	GEO bulk
1477	frb1 mutant	0.73 >More info	-0.07 >More info	WT		whole seedling	Original data	GEO bulk
1478	fil-8 yab3-2	0.73 >More info	-0.07 >More info	wt		Apices	Original data	GEO bulk
1479	camta1-2	0.73 >More info	-0.07 >More info	Col-0-WT			Original data	GEO bulk
1480	HAP5-triple-mutant	0.73 >More info	-0.07 >More info	Col control		above-ground whole plant	Original data	GEO bulk
1481	siz1-3 drought	0.73 >More info	-0.07 >More info	Col-0 drought			Original data	GEO bulk
1482	Mutant NahG(leaf)	0.73 >More info	-0.07 >More info	Col-0 (leaf)			Original data	GEO bulk
1483	4C 6h	0.73 >More info	-0.07 >More info	22C 3h			Original data	GEO bulk
1484	COL-0-Fe--shoot	0.73 >More info	-0.07 >More info	COL-0-Ctrl--shoot		shoot	Original data
1485	myb61 cork	0.73 >More info	-0.07 >More info	wt cork		cork	Original data	GEO bulk
1486	Mutant ufo-1(shoot apex)	0.73 >More info	-0.07 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
1487	Tsu SA	0.73 >More info	-0.07 >More info	Col-0 SA			Original data	GEO bulk
1488	DC3000 24h	0.73 >More info	-0.07 >More info	Mock 24h	DC3000		Original data	GEO bulk
1489	M6PR transgenic leaf 0mM NaCl	0.73 >More info	-0.07 >More info	Col leaf 0mM NaCl		leaf	Original data	GEO bulk
1490	Elevated CO2 leaf primordia	0.73 >More info	-0.07 >More info	Ambient CO2 leaf primordia		leaf primordia	Original data
1491	osmotic 10day root	0.73 >More info	-0.07 >More info	mock 10day root	osmotic	roots	Original data	GEO bulk
1492	Regenerating Stump Root Tip Cut 130 mm andn Recut 5 hrs Taking 70 mm of Stump (4dpg)	0.73 >More info	-0.07 >More info	Control for tissue data			Original data	GEO bulk
1493	Protoplast Induced	0.73 >More info	-0.07 >More info	Uninduced			Original data	GEO bulk
1494	SQ8 roots 2hr KCl control	0.73 >More info	-0.07 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
1495	root longitudinal zone-3 -Fe	0.73 >More info	-0.08 >More info	root longitudinal zone-3 standard			Original data	GEO bulk
1496	2 hr Hypoxia IP RNA	0.73 >More info	-0.08 >More info	2 hr Non-Stress IP RNA		seedlings	Original data	GEO bulk
1497	Dark 1day ivd	0.73 >More info	-0.08 >More info	0h ivd			Original data
1498	WT (Col-0) inflorescence well-watered day 5	0.73 >More info	-0.08 >More info	WT (Col-0) inflorescence well-watered day 0		Unopen flower buds	Original data	GEO bulk
1499	CCA1-ox 6pm small polysomal	0.73 >More info	-0.08 >More info	WT 6pm small polysomal		aerial part	Original data
1500	hyl1	0.73 >More info	-0.08 >More info	Col-0			Original data	GEO bulk
1501	Col(gl) 0mM NaCl	0.73 >More info	-0.08 >More info	Col 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
1502	dyt1	0.73 >More info	-0.08 >More info	WT		anther	Original data	GEO bulk
1503	M6PR transgenic 0mM NaCl	0.73 >More info	-0.08 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
1504	fus3-3 12 DAF Seed	0.73 >More info	-0.08 >More info	WT (Col-0) 12 DAF Seed-3		developing seeds dissected from sliques	Original data
1505	CCA1-ox 12pm small polysomal	0.73 >More info	-0.08 >More info	WT 12pm small polysomal		aerial part	Original data
1506	WT Na2S	0.73 >More info	-0.08 >More info	WT water	Na2S	leaf	Original data	GEO bulk
1507	estradiole-induced ANAC092	0.73 >More info	-0.08 >More info	transgenic (empty vector inducible system)			Original data	GEO bulk
1508	Selenate (root)	0.73 >More info	-0.08 >More info	Ws (root)			Original data	GEO bulk
1509	rgs1+sucrose	0.73 >More info	-0.08 >More info	WT+sucrose		rosette leaves	Original data	GEO bulk
1510	Root Selenate	0.73 >More info	-0.08 >More info	Root control	40 micromolar selenate	Root	Original data	GEO bulk
1511	dde2-2 24hpi A. brassicicola	0.73 >More info	-0.08 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
1512	WT (Col-0) inflorescence moderate drought day 3	0.73 >More info	-0.08 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
1513	penta Flg22 1h	0.73 >More info	-0.08 >More info	Laer Flg22 1h		leaf discs	Original data	GEO bulk
1514	AFB1 PSTDC3000 24h	0.73 >More info	-0.08 >More info	Col PSTDC3000 24h		Leaf	Original data	GEO bulk
1515	cdm1 mutant floral young floral buds	0.73 >More info	-0.08 >More info	WT floral yound floral buds		Unopen flower buds	Original data
1516	aox1a:rpoTmp untreated	0.73 >More info	-0.08 >More info	WT(Col0) untreated (control aox1a:rpoTmp)		leaf	Original data
1517	seu-3 ant-1	0.73 >More info	-0.08 >More info	Col-0			Original data	GEO bulk
1518	(Col-0)+100 uM As	0.73 >More info	-0.08 >More info	(Col-0)+0 uM As	treated with 100 uM As	Roots	Original data	GEO bulk
1519	shoot-10 μM DEX- 6 hr	0.73 >More info	-0.08 >More info	shoot-10 μM DEX- 0 hr	SHR induction by DEX	whole shoot	Original data
1520	Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)	0.73 >More info	-0.08 >More info	Control for tissue data			Original data	GEO bulk
1521	Col(gl) leaf 0mM NaCl	0.73 >More info	-0.08 >More info	Col leaf 0mM NaCl		leaf	Original data	GEO bulk
1522	CLV3p cells	0.73 >More info	-0.08 >More info	Protoplast Induced			Original data	GEO bulk
1523	seed coat heart stage	0.73 >More info	-0.08 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
1524	Daminozide 3 h	0.73 >More info	-0.08 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
1525	nhx5	0.73 >More info	-0.08 >More info	WT		Rosette leaf	Original data	GEO bulk
1526	lec2-1 8 DAF Seed	0.73 >More info	-0.08 >More info	WT (WS) 8 DAF Seed		developing seeds dissected from sliques	Original data
1527	4C 3h	0.73 >More info	-0.08 >More info	22C 3h			Original data	GEO bulk
1528	Control KNO3 roots - 2hours	0.73 >More info	-0.08 >More info	Control KCl roots - 2hours	5mM KNO3 on both sides for 2 hours	roots	Original data	GEO bulk
1529	shoot control p35S	0.73 >More info	-0.08 >More info	shoot control total			Original data	GEO bulk
1530	whole roots -Fe 48 hour	0.73 >More info	-0.08 >More info	whole roots standard			Original data	GEO bulk
1531	Heat shock 20%Inhibition	0.73 >More info	-0.08 >More info	Heat shock baseline	Photosynthesis at 20% inhibition from optimum	leaf first fully expanded	Original data	GEO bulk
1532	Light 3day ivd	0.73 >More info	-0.08 >More info	0h ivd			Original data
1533	Heat 2 days recovery	0.73 >More info	-0.08 >More info	Mock 2 days recovery		seedling	Original data	GEO bulk
1534	MYB76 OE	0.73 >More info	-0.08 >More info	WT for MYB29/76			Original data	GEO bulk
1535	Emwa1 inoculated WT 3 dpi	0.73 >More info	-0.08 >More info	wild type		Cotyledons	Original data	GEO bulk
1536	Mutant nph4-1	0.73 >More info	-0.08 >More info	Col			Original data	GEO bulk
1537	myb50 cork	0.73 >More info	-0.08 >More info	wt cork		cork	Original data	GEO bulk
1538	Apex mir-319b 17DAS	0.73 >More info	-0.08 >More info	Apex Col 14DAS			Original data	GEO bulk
1539	OxPHR1 -Pi-DEX-CHX	0.73 >More info	-0.08 >More info	phr1 -Pi-DEX-CHX			Original data	GEO bulk
1540	gid1a gid1b-1 gid1c-2 mock 1 hr	0.73 >More info	-0.08 >More info	ga-1 mock 1 hr			Original data	GEO bulk
1541	Salt Stress 24 h (root)	0.73 >More info	-0.08 >More info	Stress mock 24 h (root)			Original data	Stress treatments
1542	mutant acs5D (single mutant)	0.73 >More info	-0.08 >More info	col control (single mutant)			Original data	GEO bulk
1543	Col 8h	0.73 >More info	-0.08 >More info	Col CA		Leaves	Original data
1544	Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)	0.73 >More info	-0.09 >More info	Control for tissue data			Original data	GEO bulk
1545	Te 8h	0.73 >More info	-0.09 >More info	Te CA		Leaves	Original data
1546	wrky72-1-NOCO2 INFECTED	0.73 >More info	-0.09 >More info	WT-NOCO2 INFECTED			Original data	GEO bulk
1547	Infected Col-0 leaf	0.73 >More info	-0.09 >More info	Mock Col-0 leaf	F. oxysporum	leaf	Original data	GEO bulk
1548	opr3 OPDA 22 h	0.73 >More info	-0.09 >More info	opr3 0 h			Original data	GEO bulk
1549	ssi2	0.73 >More info	-0.09 >More info	WT COL		leaves	Original data	GEO bulk
1550	Fenclorim 24hr	0.73 >More info	-0.09 >More info	Acetone 24hr		root	Original data	GEO bulk
1551	Nicotinamide-77hr	0.73 >More info	-0.09 >More info	WT-untreated-77hr	nicotinamide	aerial tissue	Original data	GEO bulk
1552	IBM1 knockout	0.73 >More info	-0.09 >More info	WT			Original data	GEO bulk
1553	torpedo-cotyledon	0.73 >More info	-0.09 >More info	Control for tissue data			Original data	GEO bulk
1554	CCA1-ox 12pm large polysomal	0.73 >More info	-0.09 >More info	WT 12pm large polysomal		aerial part	Original data
1555	over-tAPX	0.73 >More info	-0.09 >More info	WT Col			Original data	GEO bulk
1556	met1-3 second-selfed generation	0.73 >More info	-0.09 >More info	Col WT		leaf	Original data	GEO bulk
1557	Day Time Treatment	0.73 >More info	-0.09 >More info	Day Time Control	1hr white light pulse	aerial rosette	Original data
1558	mutant acs9B (single mutant)	0.73 >More info	-0.09 >More info	col control (single mutant)			Original data	GEO bulk
1559	Mutant cry1 (High Light)	0.73 >More info	-0.09 >More info	Col-0 (High Light)			Original data	GEO bulk
1560	ahg1-1	0.73 >More info	-0.09 >More info	ABA control			Original data	GEO bulk
1561	SQ8 roots 2hr KNO3 nitrogen	0.73 >More info	-0.09 >More info	Col0 roots 2hr KNO3 nitrogen		root	Original data	GEO bulk
1562	median nectary stage 14-15	0.73 >More info	-0.09 >More info	Control for tissue data		median nectaries	Original data	GEO bulk
1563	cdkf:1-2	0.73 >More info	-0.09 >More info	wt seedling		young seedlings	Original data	GEO bulk
1564	mkk1 control rep	0.73 >More info	-0.09 >More info	Col-0 Time 0 rep			Original data	GEO bulk
1565	Dark 3day hml	0.73 >More info	-0.09 >More info	0h hml			Original data
1566	Col-0 48 hpi	0.73 >More info	-0.09 >More info	Col-0 uninoculated			Original data	GEO bulk
1567	Ibuprofen 3 h	0.73 >More info	-0.09 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
1568	Lip0 UV	0.73 >More info	-0.09 >More info	Lip0 mock	UV	seedling	Original data
1569	35S::CYC	0.73 >More info	-0.09 >More info	thaliana control		secondary inflorescence	Original data
1570	wrky72-1-MOCK	0.73 >More info	-0.09 >More info	WT-MOCK			Original data	GEO bulk
1571	root stele pH4.6	0.73 >More info	-0.09 >More info	root stele pH5.7			Original data	GEO bulk
1572	Te ozone	0.73 >More info	-0.09 >More info	Te ctrl	350 ppb ozone exposure for 2hr	whole rosette	Original data
1573	dor control	0.73 >More info	-0.09 >More info	WT control			Original data	GEO bulk
1574	des1.1	0.73 >More info	-0.09 >More info	Leaves-WT		leaf	Original data	GEO bulk
1575	WOX1-1	0.73 >More info	-0.09 >More info	Col-0		aerial part	Original data
1576	CCA1-ox 6pm large polysomal	0.73 >More info	-0.09 >More info	WT 6pm large polysomal		aerial part	Original data
1577	HSP90 Reduced Salk hsp90.2	0.73 >More info	-0.09 >More info	HSP90 Reduced Control		All aerial tissue	Original data	GEO bulk
1578	ARR21C-ox	0.73 >More info	-0.09 >More info	Col-0			Original data	ARR21C overexpression
1579	Methyl Violet 0.5 uM	0.73 >More info	-0.09 >More info	Control MV and IC	Methyl Violet		Original data
1580	WT chitooctaose	0.73 >More info	-0.09 >More info	WT water			Original data	GEO bulk
1581	vtc2 day 7 induction	0.73 >More info	-0.09 >More info	WT day 7 induction		day 7 induction of somatic embryogenesis	Original data	GEO bulk
1582	low water potential	0.73 >More info	-0.09 >More info	control	Col-0 -1.2 MPa	whole seedlings	Original data	GEO bulk
1583	GO5; harvested 8h continiously maintained in high CO2;	0.73 >More info	-0.09 >More info	WT; harvested 8h continiously maintained in high CO2;		2 whole rosettes	Original data
1584	vtc2 zygotic embryo	0.73 >More info	-0.09 >More info	WT zygotic embryo		zygotic embryo	Original data	GEO bulk
1585	se-1 p35S::MIR156	0.73 >More info	-0.09 >More info	Col-0		vegetative apex	Original data	GEO bulk
1586	sdg8-2 mutant	0.73 >More info	-0.09 >More info	wild type		leaf	Original data	GEO bulk
1587	seedling 30 min S Exp	0.73 >More info	-0.09 >More info	seedling -S Exp		seedling	Original data
1588	pistil 8.0HAP	0.73 >More info	-0.09 >More info	unpollinated pistil		pistil	Original data	GEO bulk
1589	Mutant ap3-6(flower)	0.73 >More info	-0.09 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
1590	seed coat	0.73 >More info	-0.09 >More info	Control for tissue data			Original data	GEO bulk
1591	cry1 high light	0.73 >More info	-0.09 >More info	Col-O high light			Original data	GEO bulk
1592	Cvi	0.73 >More info	-0.09 >More info	Col-0			Original data	GEO bulk
1593	Chitin	0.73 >More info	-0.10 >More info	Col C			Original data	GEO bulk
1594	Callus	0.73 >More info	-0.10 >More info	Control for tissue data		callus	Original data	GEO bulk
1595	msh1 stunt	0.73 >More info	-0.10 >More info	WT Col-0		above ground part of plant	Original data	GEO bulk
1596	Nuclear GSH2	0.73 >More info	-0.10 >More info	Cytoplasmic GSH2	Control		Original data	GEO bulk
1597	Night Time Treatment	0.73 >More info	-0.10 >More info	Night Time Control	1hr white light pulse	aerial rosette	Original data
1598	CMV-WT	0.73 >More info	-0.10 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
1599	nhx5-2/nhx6	0.73 >More info	-0.10 >More info	WT		Rosette leaf	Original data	GEO bulk
1600	Root sol2	0.73 >More info	-0.10 >More info	Root wt			Original data	GEO bulk
1601	04h Col-0	0.73 >More info	-0.10 >More info	00h Col-0			Original data	GEO bulk
1602	bZIP1ko mutant N+Light+	0.73 >More info	-0.10 >More info	WT-sib N+Light+		whole plant	Original data	GEO bulk
1603	sfr6 drought	0.73 >More info	-0.10 >More info	WT drought		All aerial tissue	Original data	GEO bulk
1604	20d after anthesis	0.73 >More info	-0.10 >More info	10d after anthesis		senescing pod tissues of 20 days after anthesis	Original data	GEO bulk
1605	4C 0h	0.73 >More info	-0.10 >More info	22C 0h			Original data	GEO bulk
1606	lec1-1 Globular Stage Seed	0.73 >More info	-0.10 >More info	Control for tissue data			Original data	GEO bulk
1607	Sha-3h IAA	0.73 >More info	-0.10 >More info	Sha-0h IAA		whole plant	Original data	GEO bulk
1608	elevated CO2 normal Mg root	0.73 >More info	-0.10 >More info	atmospheric CO2 normal Mg root		Root	Original data
1609	plant (tga2-5-6) 4h OPDA	0.73 >More info	-0.10 >More info	plant (tga2-5-6) 4h control			Original data	GEO bulk
1610	Dark 3day wt	0.73 >More info	-0.10 >More info	0h wt			Original data
1611	Mutant cry1	0.73 >More info	-0.10 >More info	Col-0			Original data	GEO bulk
1612	C58 6dpi	0.73 >More info	-0.10 >More info	Reference 6dpi		wounded inflorescence stalk segments	Original data	GEO bulk
1613	gh3.5-1D 48 hpi	0.73 >More info	-0.10 >More info	Col-0 uninoculated			Original data	GEO bulk
1614	agb1 gpa1 -ABA LF	0.73 >More info	-0.10 >More info	Col-0 -ABA LF		Leaves of five week-old plants	Original data	GEO bulk
1615	apum23	0.73 >More info	-0.10 >More info	WT (Col-3)		aerial parts	Original data	GEO bulk
1616	root stele 40 mM NaCls	0.73 >More info	-0.10 >More info	root stele			Original data	GEO bulk
1617	Col-0 ozone- (control genotype tga2 tag5 tga6)	0.73 >More info	-0.10 >More info	Col-0 ctrl (control genotype tga2 tag5 tga6)	350 ppb ozone exposure for 2hr		Original data
1618	0.5h pollen tube	0.73 >More info	-0.10 >More info	drypollen		in vitro-grown pollen tubes	Original data	GEO bulk
1619	lateral nectary stage 14-15	0.73 >More info	-0.10 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
1620	Oxidative Stress 3 h (shoot)	0.73 >More info	-0.10 >More info	Stress mock 3 h (shoot)			Original data	Stress treatments
1621	shoot hypoxia pSUC2	0.73 >More info	-0.10 >More info	shoot hypoxia total			Original data	GEO bulk
1622	Mutant gh3.5-1D (AvrRpt2)	0.73 >More info	-0.10 >More info	Col-0 (AvrRpt2)			Original data	GEO bulk
1623	RPL18 TuMV inoculated total RNA	0.73 >More info	-0.10 >More info	mock inoculated total RNA		PO	Original data	GEO bulk
1624	IAA/inhibitor B Treated	0.73 >More info	-0.10 >More info	IAA Treated			Original data	GEO bulk
1625	rdo3 siliques	0.73 >More info	-0.10 >More info	WT Ler siliques			Original data	GEO bulk
1626	an3-4 leaf primordia	0.73 >More info	-0.10 >More info	WT leaf primordia			Original data	GEO bulk
1627	Light 3day wt	0.73 >More info	-0.10 >More info	0h wt			Original data
1628	vte2-1 1d vernalization	0.73 >More info	-0.10 >More info	WT 1d vernalization			Original data	GEO bulk
1629	brm-1	0.73 >More info	-0.10 >More info	wt		shoots	Original data	GEO bulk
1630	15m.KNO3	0.73 >More info	-0.10 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
1631	Dark 6h ivd	0.73 >More info	-0.10 >More info	0h ivd			Original data
1632	cat2-short-day 4d	0.73 >More info	-0.10 >More info	Col0-SD4	transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
1633	Col-0 flu HL 0h	0.73 >More info	-0.10 >More info	Col-0 WT HL 0h	without high light treatment	whole seedlings without root	Original data
1634	WUSp cells	0.73 >More info	-0.10 >More info	Protoplast Induced			Original data	GEO bulk
1635	arp6-10 12 ºC	0.73 >More info	-0.10 >More info	Col-0 12 ºC		whole seedlings	Original data	GEO bulk
1636	ein2-1 24hpi A. brassicicola	0.73 >More info	-0.10 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
1637	AtHB8	0.73 >More info	-0.10 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1638	in vitro pollen tube	0.73 >More info	-0.10 >More info	Control for tissue data		pollen tube	Original data
1639	BAM8 Ox untreated	0.73 >More info	-0.10 >More info	WT untreated	none	shoot	Original data
1640	dcl1-7	0.73 >More info	-0.10 >More info	Ler			Original data	GEO bulk
1641	S17	0.73 >More info	-0.10 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
1642	vte2 leaves 48h LT	0.73 >More info	-0.10 >More info	Col leaves 48h LT	48h	9-11th adult leaves	Original data
1643	Seedling-HeatStressed TOTALmRNA	0.73 >More info	-0.10 >More info	Seedling-control TOTALmRNA		seedling	Original data
1644	cry1 low light	0.73 >More info	-0.10 >More info	Col-O low light			Original data	GEO bulk
1645	Nicotinamide-57hr	0.73 >More info	-0.10 >More info	WT-untreated-57hr	nicotinamide	aerial tissue	Original data	GEO bulk
1646	ein2 mutant roots mock	0.73 >More info	-0.10 >More info	roots mock			Original data	GEO bulk
1647	gct-2 mutant 9-day-old seedlings above-ground portions	0.73 >More info	-0.10 >More info	WT 7-day-old seedlings above-ground portions		seedling	Original data
1648	WT (Col-0) inflorescence moderate drought day 10	0.73 >More info	-0.11 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
1649	Mutant ap3-6(shoot apex)	0.73 >More info	-0.11 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
1650	wrky72-2-MOCK	0.73 >More info	-0.11 >More info	WT-MOCK			Original data	GEO bulk
1651	Col-0 WT HL 3h	0.73 >More info	-0.11 >More info	Col-0 WT HL 0h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
1652	SND1XVE	0.73 >More info	-0.11 >More info	SND1XVE Control	cycloheximide+estradiol		Original data	GEO bulk
1653	short 8-degree-	0.73 >More info	-0.11 >More info	control short			Original data	GEO bulk
1654	GR:KAN1 DEX Shade	0.73 >More info	-0.11 >More info	GR:KAN1 Mock Shade		seedlings	Original data
1655	ara1OX	0.73 >More info	-0.11 >More info	Col-0			Original data	GEO bulk
1656	Got7 UV	0.73 >More info	-0.11 >More info	Got7 mock	UV	seedling	Original data
1657	tfl1-1-16ºC	0.73 >More info	-0.11 >More info	WT-16ºC			Original data	GEO bulk
1658	T8 leaf-drought	0.73 >More info	-0.11 >More info	T8 leaf-well watered			Original data	GEO bulk
1659	pollen	0.73 >More info	-0.11 >More info	Control for tissue data		pollen grain	Original data	GEO bulk
1660	Nicotinamide-53hr	0.73 >More info	-0.11 >More info	WT-untreated-53hr	nicotinamide	aerial tissue	Original data	GEO bulk
1661	atmospheric CO2 high Mg shoot	0.73 >More info	-0.11 >More info	atmospheric CO2 normal Mg shoot		Shoot	Original data
1662	penta MeJA 1h	0.73 >More info	-0.11 >More info	Laer MeJA 1h		leaf discs	Original data	GEO bulk
1663	pap1-D/tt4	0.73 >More info	-0.11 >More info	Col-0		aerial part	Original data
1664	GRX-overexpression seedlings control	0.73 >More info	-0.11 >More info	WT seedlings control		Seedlings	Original data	GEO bulk
1665	Full C2 T3	0.73 >More info	-0.11 >More info	C2 C2del and (As)AKiin11 control T3	three days post infusion with Agrobacterium containing full-length SCTV C2	Arabidopsis rosette leaves	Original data
1666	Polysomal RNA 35S:AtCSP1-FH1	0.73 >More info	-0.11 >More info	Polysomal RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
1667	SCR-GR Time 1H Dex	0.73 >More info	-0.11 >More info	SCR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
1668	ap1-1 cal-1 35S:AGGR +DEX 1d	0.73 >More info	-0.11 >More info	Mock 1d	Steroid		Original data	GEO bulk
1669	CBF3 100mM NaCl	0.73 >More info	-0.11 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
1670	MYB12OX/tt4	0.73 >More info	-0.11 >More info	Col-0		aerial part	Original data
1671	Homozygous-AtcesA6	0.73 >More info	-0.11 >More info	Heterozygous-AtcesA6		rosette	Original data	GEO bulk
1672	Apex octa 18DAS	0.73 >More info	-0.11 >More info	Apex Col 14DAS			Original data	GEO bulk
1673	Van SA	0.73 >More info	-0.11 >More info	Col-0 SA			Original data	GEO bulk
1674	Bur-0-3h IAA	0.73 >More info	-0.11 >More info	Bur-0h IAA		whole plant	Original data	GEO bulk
1675	Col-0 RNAi-MBS2/mbs1-1 HL 0h	0.73 >More info	-0.11 >More info	Col-0 WT HL 0h	without high light treatment	whole seedlings without root	Original data
1676	Col-0 mbs1-1 HL 0h	0.73 >More info	-0.11 >More info	Col-0 WT HL 0h	without high light treatment	whole seedlings without root	Original data
1677	gabaculin	0.73 >More info	-0.11 >More info	WT Col-0		seedling	Original data	GEO bulk
1678	Col-0 SA	0.73 >More info	-0.11 >More info	Col-0			Original data	GEO bulk
1679	Whole root - low pH 12H	0.73 >More info	-0.11 >More info	Whole root - Std pH 12H	pH 4.6 for 12 hr		Original data	GEO bulk
1680	Compost	0.73 >More info	-0.11 >More info	Perlite	Compost		Original data	GEO bulk
1681	coi1-2 JA	0.73 >More info	-0.11 >More info	JA		Whole seedling	Original data	GEO bulk
1682	Tsu -Fe 24h Shoots	0.73 >More info	-0.11 >More info	Tsu +Fe 24h Shoots			Original data	GEO bulk
1683	short 14-degree-	0.73 >More info	-0.11 >More info	control short			Original data	GEO bulk
1684	chalazal seed coat	0.73 >More info	-0.11 >More info	Control for tissue data			Original data	GEO bulk
1685	Dark 2day wt	0.73 >More info	-0.11 >More info	0h wt			Original data
1686	8 hr ammonium	0.73 >More info	-0.11 >More info	immediately prior to nitrogen addtion		roots from hydroponically grown plants	Original data	GEO bulk
1687	atr zebularine	0.73 >More info	-0.11 >More info	WT zebularine		shoot apical meristem	Original data
1688	NFA8 roots 2hr KCl control	0.73 >More info	-0.11 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
1689	Stem 1st node	0.73 >More info	-0.12 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1690	35S:ORE1-protoplast 6h	0.73 >More info	-0.12 >More info	WT	none	mesophyll cell protoplasts	Original data	GEO bulk
1691	wrky72-2-NOCO2 INFECTED	0.73 >More info	-0.12 >More info	WT-NOCO2 INFECTED			Original data	GEO bulk
1692	lug3 leaves	0.73 >More info	-0.12 >More info	WT-leaves		matured rosette leaves	Original data	GEO bulk
1693	9 hr Hypoxia IP RNA	0.73 >More info	-0.12 >More info	9 hr Non-Stress IP RNA		seedlings	Original data	GEO bulk
1694	Mutant ag-12(flower)	0.73 >More info	-0.12 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
1695	rao1-1	0.73 >More info	-0.12 >More info	Col-Luc WT mock	water control treatment 3 hours	whole green tissue	Original data	GEO bulk
1696	ice1 6H Cold	0.73 >More info	-0.12 >More info	WT 6H Cold			Original data	GEO bulk
1697	arr10 arr12 tZ	0.73 >More info	-0.12 >More info	tZ	trans-zeatin	roots	Original data	GEO bulk
1698	WT (Col) glucose	0.73 >More info	-0.12 >More info	WT (Col)	glucose	seedlings	Original data	GEO bulk
1699	rosette leaves fdh	0.73 >More info	-0.12 >More info	rosette leaves WT		Young rosette leaves 2mm to 1cm	Original data	GEO bulk
1700	AZC	0.73 >More info	-0.12 >More info	noneHS			Original data	GEO bulk
1701	Full C2 T1	0.73 >More info	-0.12 >More info	C2 C2del and (As)AKiin11 control T1	one day post infusion with Agrobacterium containing full-length SCTV C2	Arabidopsis rosette leaves	Original data
1702	exo70A1	0.73 >More info	-0.12 >More info	Col-0		whole plant	Original data	GEO bulk
1703	root endodermis -S	0.73 >More info	-0.12 >More info	root endodermis and quiescent center pH5.7			Original data	GEO bulk
1704	elevated CO2 high Mg root	0.73 >More info	-0.12 >More info	atmospheric CO2 high Mg root		Root	Original data
1705	chalazal endosperm heart stage	0.73 >More info	-0.12 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
1706	Stem tissue 5 days NAA	0.73 >More info	-0.12 >More info	Stem tissue T0	Stem tissue with NAA treatment	Stem tissue with NAA treatment	Original data	GEO bulk
1707	35S::IaTCP	0.73 >More info	-0.12 >More info	thaliana control		secondary inflorescence	Original data
1708	Tsu	0.73 >More info	-0.12 >More info	Col-0			Original data	GEO bulk
1709	Shoot submergence 24h	0.73 >More info	-0.12 >More info	Shoot light control	24 h submergence in darkness	whole shoot	Original data	GEO bulk
1710	col 24h4c set4	0.73 >More info	-0.12 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
1711	Sepals stage15	0.73 >More info	-0.12 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1712	mutant acs4A (single mutant)	0.73 >More info	-0.12 >More info	col control (single mutant)			Original data	GEO bulk
1713	gpa1-4/agb1-2 ozone 2d	0.73 >More info	-0.12 >More info	Col ozone 2d	ozone		Original data	GEO bulk
1714	BAM7 Ox untreated	0.73 >More info	-0.12 >More info	WT untreated	none	shoot	Original data
1715	Col-7 Sucrose	0.73 >More info	-0.12 >More info	col-7			Original data	GEO bulk
1716	Mature pollen	0.73 >More info	-0.12 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1717	ABA 3h	0.73 >More info	-0.12 >More info	EtOH 3h	3hr		Original data	GEO bulk
1718	15m light	0.73 >More info	-0.12 >More info	before light		whole seedlings	Original data	GEO bulk
1719	camta1/2/3 warm	0.73 >More info	-0.12 >More info	WT warm		entire aerial part	Original data	GEO bulk
1720	HSP90 Reduced RNAi-B1	0.73 >More info	-0.12 >More info	HSP90 Reduced Col-0 CS60000		All aerial tissue	Original data	GEO bulk
1721	Whole root - low pH 1H	0.73 >More info	-0.12 >More info	Whole root - Std pH 1H	pH 4.6 for 1 hr		Original data	GEO bulk
1722	ABA 3 h	0.73 >More info	-0.12 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
1723	Prohexadione 12 h	0.73 >More info	-0.12 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
1724	FLIGHT TAGESB plate6 SHOOTS	0.73 >More info	-0.12 >More info	GROUND CONTROL TAGESB plate6 SHOOTS		plant tissue	Original data
1725	opr3 JA 8 h	0.73 >More info	-0.12 >More info	opr3 0 h			Original data	GEO bulk
1726	0h ivd	0.73 >More info	-0.12 >More info	0h wt			Original data
1727	20m.KNO3	0.73 >More info	-0.12 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
1728	rdr6-11 ein5-1 ski2-3	0.73 >More info	-0.12 >More info	Col-0		aerial tissue	Original data
1729	bZIP TDNA mutant	0.73 >More info	-0.12 >More info	Col-WT		mature pollen	Original data	GEO bulk
1730	edr1 18 h powdery mildew	0.73 >More info	-0.12 >More info	Col-0 18 h powdery mildew			Original data	GEO bulk
1731	atmospheric CO2 low Mg shoot	0.73 >More info	-0.12 >More info	atmospheric CO2 normal Mg shoot		Shoot	Original data
1732	atr mock	0.73 >More info	-0.12 >More info	WT mock		shoot apical meristem	Original data
1733	Imidazolinone EC50	0.73 >More info	-0.13 >More info	Carrier (Imidazolinone)			Original data	GEO bulk
1734	gun1-9 norflurazon	0.73 >More info	-0.13 >More info	gun1-9 control			Original data	GEO bulk
1735	pip3 At2g19270 RNAi 24	0.73 >More info	-0.13 >More info	Nd-1		whole plant	Original data	GEO bulk
1736	spx1 spx2 complete	0.73 >More info	-0.13 >More info	WT complete		seedlings	Original data
1737	pip3 At2g19270 TDNA 9	0.73 >More info	-0.13 >More info	Col-0		whole plant	Original data	GEO bulk
1738	Col PSTDC3000 24h	0.73 >More info	-0.13 >More info	Col 0h		Leaf	Original data	GEO bulk
1739	ex1 flu dark 8hours/30 minute light	0.73 >More info	-0.13 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
1740	S14-150	0.73 >More info	-0.13 >More info	wt			Original data	GEO bulk
1741	afb3-1 2h KCl	0.73 >More info	-0.13 >More info	Ws 2h KCl	2 hours of 5 mM KCl	Arabidopsis root	Original data	GEO bulk
1742	Col leaf scrape 5 dpi	0.73 >More info	-0.13 >More info	Col whole leaf 5d UI		leaf section scrapes	Original data	GEO bulk
1743	KAN1-GR 60min	0.73 >More info	-0.13 >More info	KAN1-GR 0min			Original data	GEO bulk
1744	piffq FR 3h	0.73 >More info	-0.13 >More info	WT FR 3h		whole seedling	Original data	GEO bulk
1745	AtMinD1 Temporal-induction	0.73 >More info	-0.13 >More info	Control		whole plant	Original data	GEO bulk
1746	DVL4 induced	0.73 >More info	-0.13 >More info	emptyvectordex			Original data	GEO bulk
1747	GA 120min	0.73 >More info	-0.13 >More info	CON120	GA 120 min.	root tips	Original data	GEO bulk
1748	35S::PI ap3-3 35S::AP-GR +DEX	0.73 >More info	-0.13 >More info	0hr DEX			Original data	GEO bulk
1749	ACC 0.5 h	0.73 >More info	-0.13 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
1750	mutant acs1A (single mutant)	0.73 >More info	-0.13 >More info	col control (single mutant)			Original data	GEO bulk
1751	Mt SA	0.73 >More info	-0.13 >More info	Col-0 SA			Original data	GEO bulk
1752	Mutant clv3-7(shoot apex)	0.73 >More info	-0.13 >More info	Shoot apex inflorescence (after bolting)			Original data	Developmental series; organs / tissues at different ages
1753	hai1-2	0.73 >More info	-0.13 >More info	control	control	whole seedlings	Original data	GEO bulk
1754	BAM7-Lig Ox untreated	0.73 >More info	-0.13 >More info	WT untreated	none	shoot	Original data
1755	Mutant arf19-1 (IAA)	0.73 >More info	-0.13 >More info	Col (IAA)			Original data	GEO bulk
1756	pip3 At2g19270 TDNA 6h-5	0.73 >More info	-0.13 >More info	Col-0		whole plant	Original data	GEO bulk
1757	lateral root cap-columella pBRN2 8h BL	0.73 >More info	-0.13 >More info	lateral root cap-columella pBRN2 0h BL	brassinosteroid	root	Original data
1758	clf-28 swn-7	0.73 >More info	-0.13 >More info	Col		whole plant	Original data	GEO bulk
1759	ein2 mutant roots IAA	0.73 >More info	-0.13 >More info	roots ethylene			Original data	GEO bulk
1760	Col dryseed	0.73 >More info	-0.13 >More info	Control for tissue data		dry seeds	Original data
1761	Nicotinamide-69hr	0.73 >More info	-0.13 >More info	WT-untreated-69hr	nicotinamide	aerial tissue	Original data	GEO bulk
1762	hrpA fliC 7h	0.73 >More info	-0.13 >More info	Mock 7h	hrpA fliC		Original data	GEO bulk
1763	endosperm ABA	0.73 >More info	-0.13 >More info	endosperm-control	ABA	endosperm	Original data	GEO bulk
1764	cell culture 4 h phytoprostane A1	0.73 >More info	-0.13 >More info	cell culture 4 h control			Original data	GEO bulk
1765	Est SA	0.73 >More info	-0.13 >More info	Col-0 SA			Original data	GEO bulk
1766	Laer Flg22(Agrobacterium) 1h	0.73 >More info	-0.13 >More info	Laer Control		leaf discs	Original data	GEO bulk
1767	ask1 mutant flower buds	0.73 >More info	-0.13 >More info	Ler WT flower buds		unopened flower buds	Original data	GEO bulk
1768	Triazolopyrimidine EC50	0.73 >More info	-0.13 >More info	Carrier (Triazolopyrimidine)			Original data	GEO bulk
1769	Fumonisin B1	0.73 >More info	-0.13 >More info	control	Fumonisin B1	protoplast	Original data	GEO bulk
1770	cs26 long day	0.73 >More info	-0.13 >More info	Leaves-WT-LD		leaf	Original data	GEO bulk
1771	seuss-3	0.73 >More info	-0.13 >More info	Col-0			Original data	GEO bulk
1772	P.p 30hai	0.73 >More info	-0.13 >More info	At-Control		roots	Original data	GEO bulk
1773	Full AC2 T2	0.73 >More info	-0.13 >More info	AC2 and AC2del control T2	two days post infusion with Agrobacterium containing full-length CaLCuV AC2	Arabidopsis rosette leaves	Original data
1774	Cocultivation 8 hrs root	0.73 >More info	-0.13 >More info	Mock cocultivation 8 hrs root		Root	Original data
1775	leaf blade in D	0.73 >More info	-0.13 >More info	leaf blade in WL		leaf blades	Original data	GEO bulk
1776	Nicotinamide-73hr	0.73 >More info	-0.13 >More info	WT-untreated-73hr	nicotinamide	aerial tissue	Original data	GEO bulk
1777	Osmotic Stress 24 h (shoot)	0.73 >More info	-0.14 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
1778	GA3 1 h (ga1)	0.73 >More info	-0.14 >More info	Mock 1 h (ga1)			Original data	Basic hormone treatment of seedlings
1779	camta3-1	0.73 >More info	-0.14 >More info	WT			Original data	GEO bulk
1780	CCA14 dark early	0.73 >More info	-0.14 >More info	Col dark early			Original data	GEO bulk
1781	CT101 ozone	0.73 >More info	-0.14 >More info	CT101 ctrl	350 ppb ozone exposure for 2hr	whole rosette	Original data
1782	Inflorescence ngaquad	0.73 >More info	-0.14 >More info	Inflorescence wt			Original data	GEO bulk
1783	Col-0 INA 48h	0.73 >More info	-0.14 >More info	Col-0 MOCK 48h			Original data	GEO bulk
1784	axr1 hypocotyl	0.73 >More info	-0.14 >More info	wt hypocotyl		hypocotyl	Original data	GEO bulk
1785	whole roots -Fe 3 hour	0.73 >More info	-0.14 >More info	whole roots standard			Original data	GEO bulk
1786	del1-1 5dpi	0.73 >More info	-0.14 >More info	Col-0 5dpi		mature fully expanded leaves	Original data	GEO bulk
1787	Stem tissue 2 days NAA	0.73 >More info	-0.14 >More info	Stem tissue T0	Stem tissue with NAA treatment	Stem tissue with NAA treatment	Original data	GEO bulk
1788	bak1-3 +Pep2 10h	0.73 >More info	-0.14 >More info	WT +Pep2 10h	Pep2		Original data	GEO bulk
1789	hen1	0.73 >More info	-0.14 >More info	Ler			Original data	GEO bulk
1790	Col-0 V. longisporum-inoculated 48 hpi	0.73 >More info	-0.14 >More info	Col-0 mock 48 hpi		Pool of >50 individual roots	Original data
1791	vtc2-1	0.73 >More info	-0.14 >More info	Col-0		whole plant	Original data	GEO bulk
1792	Heat no recovery	0.73 >More info	-0.14 >More info	Mock no recovery		seedling	Original data	GEO bulk
1793	piffq FR 24h	0.73 >More info	-0.14 >More info	WT FR 24h		whole seedling	Original data	GEO bulk
1794	Col-0 INA 6d	0.73 >More info	-0.14 >More info	Col-0 MOCK 6d			Original data	GEO bulk
1795	rGRF3x35S:GIF	0.73 >More info	-0.14 >More info	Col-0		Apices from 20 day-old plants growth in shortdays	Original data
1796	chalazal seed coat mature green	0.73 >More info	-0.14 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
1797	esd7-1	0.73 >More info	-0.14 >More info	Ler		seedlings	Original data	GEO bulk
1798	nrpe1	0.73 >More info	-0.14 >More info	WT			Original data
1799	Col-0-3h IAA	0.73 >More info	-0.14 >More info	Col-0-0h IAA		whole plant	Original data	GEO bulk
1800	CMV-A2b mutant	0.73 >More info	-0.14 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
1801	Ler hypocotyl	0.73 >More info	-0.14 >More info	wt hypocotyl		hypocotyl	Original data	GEO bulk
1802	12m.KNO3	0.73 >More info	-0.14 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
1803	Col 3d	0.73 >More info	-0.14 >More info	Col CA		Leaves	Original data
1804	aln-1	0.73 >More info	-0.14 >More info	Col-0		Aerial part of seedlings	Original data
1805	Cold Stress 24 h (shoot)	0.73 >More info	-0.14 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
1806	Cor hrpS 10h	0.73 >More info	-0.14 >More info	Mock 10h	Cor hrpS		Original data	GEO bulk
1807	t-zeatin 1 h	0.73 >More info	-0.14 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
1808	ein2 1% sucrose 14-day-old	0.73 >More info	-0.14 >More info	Col-0 1% sucrose 14-day-old			Original data	GEO bulk
1809	FLIGHT TAGESB plate6 ROOTS	0.73 >More info	-0.14 >More info	GROUND CONTROL TAGESB plate6 ROOTS		plant tissue	Original data
1810	coronatine	0.73 >More info	-0.14 >More info	control		rosette leaves	Original data
1811	Senescing leaf	0.73 >More info	-0.14 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1812	P.syringae AvrRpt2 4 h (leaf)	0.73 >More info	-0.14 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
1813	60m light	0.73 >More info	-0.14 >More info	before light		whole seedlings	Original data	GEO bulk
1814	eto1-4 +370	0.73 >More info	-0.14 >More info	eto1-4		whole seedling	Original data	GEO bulk
1815	hsfa1 quadruple mutant heat shock	0.73 >More info	-0.14 >More info	WT (Col-0) heat shock		whole seedling	Original data	GEO bulk
1816	Fe starvation 3 h	0.73 >More info	-0.14 >More info	Control			Original data	GEO bulk
1817	Heat 6h-recover 48h	0.73 >More info	-0.14 >More info	Heat 6h		rosettes - 5 leaves stage	Original data
1818	C24-3h IAA	0.73 >More info	-0.14 >More info	C24-0h IAA		whole plant	Original data	GEO bulk
1819	Col whole leaf 5dpi	0.73 >More info	-0.14 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
1820	WT +Zn	0.73 >More info	-0.14 >More info	WT Control		Root	Original data	GEO bulk
1821	scl3	0.73 >More info	-0.14 >More info	Col-0		whole root	Original data	GEO bulk
1822	abi4 vtc2 (I)	0.73 >More info	-0.14 >More info	Col (I)		rosette	Original data	GEO bulk
1823	mutant acs6E (single mutant)	0.73 >More info	-0.14 >More info	col control (single mutant)			Original data	GEO bulk
1824	seed coat mature green	0.73 >More info	-0.14 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
1825	NAA 3h	0.73 >More info	-0.15 >More info	before treatment	NAA	root	Original data	GEO bulk
1826	Mutant iaa17-6	0.73 >More info	-0.15 >More info	Col			Original data	GEO bulk
1827	ABA 1 h	0.73 >More info	-0.15 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
1828	ga1-3 scl3-1	0.73 >More info	-0.15 >More info	ga1-3		whole root	Original data
1829	Whole root - low pH 24H	0.73 >More info	-0.15 >More info	Whole root - Std pH 24H	pH 4.6 for 24 hr		Original data	GEO bulk
1830	ara1/2mut	0.73 >More info	-0.15 >More info	Col-3			Original data	GEO bulk
1831	brm-101	0.73 >More info	-0.15 >More info	Ler			Original data	GEO bulk
1832	P. infestans 6 h (leaf)	0.73 >More info	-0.15 >More info	Mock 6 h (leaf)			Original data	Elicitor treatments
1833	ga-1 1 hr 100 uM GA3	0.73 >More info	-0.15 >More info	ga-1 mock 1 hr			Original data	GEO bulk
1834	OE-HRA1 2HS	0.73 >More info	-0.15 >More info	Col-0 2HS	2 h hypoxia stress (2HS)	7-day-old seedlings	Original data
1835	lec1-1 8 DAF Seed	0.73 >More info	-0.15 >More info	WT (WS) 8 DAF Seed		developing seeds dissected from sliques	Original data
1836	shoots bhlh100/101 0uM Fe	0.73 >More info	-0.15 >More info	shoots WT 0uM Fe	0uM Fe	shoots	Original data	GEO bulk
1837	bam7 bam8 untreated	0.73 >More info	-0.15 >More info	WT untreated	none	shoot	Original data
1838	Col-0 2h NAA	0.73 >More info	-0.15 >More info	Col-0 6h MOCK			Original data	GEO bulk
1839	IAA 0.5h	0.73 >More info	-0.15 >More info	control 0.5h		root	Original data	GEO bulk
1840	rosettes myoox drought	0.73 >More info	-0.15 >More info	rosettes myoox watered			Original data	GEO bulk
1841	Est	0.73 >More info	-0.15 >More info	Col-0			Original data	GEO bulk
1842	35S::ZAT12	0.73 >More info	-0.15 >More info	gl1			Original data	GEO bulk
1843	xrn4-5 flower	0.73 >More info	-0.15 >More info	Col-0 flower		inflorescence	Original data	GEO bulk
1844	Hypocotyl	0.73 >More info	-0.15 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1845	Stem 2ndinternode	0.73 >More info	-0.15 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1846	SHR-GR Time 3H Dex	0.73 >More info	-0.15 >More info	SHR-GR Time 0H Dex	Dex media for 3 hours		Original data	GEO bulk
1847	vtc2 (I)	0.73 >More info	-0.15 >More info	Col (I)		rosette	Original data	GEO bulk
1848	pap1-D	0.73 >More info	-0.15 >More info	Col-0		aerial part	Original data
1849	WT mitomycin C	0.73 >More info	-0.15 >More info	WT mock		shoot apical meristem	Original data
1850	myb50 xylem	0.73 >More info	-0.15 >More info	wt xylem		xylem	Original data	GEO bulk
1851	stele pSHR 3h BL	0.73 >More info	-0.15 >More info	stele pSHR 0h BL	brassinosteroid	root	Original data
1852	sni1	0.73 >More info	-0.15 >More info	WT			Original data	GEO bulk
1853	pif1-2 dark	0.73 >More info	-0.15 >More info	Wt dark			Original data	GEO bulk
1854	30m light	0.73 >More info	-0.15 >More info	before light		whole seedlings	Original data	GEO bulk
1855	Mutant pif1-2 (Dark etiol)	0.73 >More info	-0.15 >More info	Col-0 (Dark etiol)			Original data	GEO bulk
1856	Col ozone 2d	0.73 >More info	-0.15 >More info	Col clean-air 2d	ozone		Original data	GEO bulk
1857	pnp1-1 3h -P	0.73 >More info	-0.15 >More info	WT 3h -P	No phosphate medium	seedlings without roots	Original data	GEO bulk
1858	dcl1-15 mutant	0.73 >More info	-0.15 >More info	WT torpedo embryos		torpedo embryos	Original data	GEO bulk
1859	des1 water	0.73 >More info	-0.15 >More info	WT water	water	leaf	Original data	GEO bulk
1860	tcp14	0.73 >More info	-0.15 >More info	WT		inflorescences	Original data	GEO bulk
1861	Tsu -Fe 24h Roots	0.73 >More info	-0.15 >More info	Tsu +Fe 24h Roots			Original data	GEO bulk
1862	tcp13/+ tcp14/+	0.73 >More info	-0.15 >More info	WT		inflorescences	Original data	GEO bulk
1863	ABI3GR +DEX +CHX	0.73 >More info	-0.15 >More info	ABI3GR -DEX +CHX	DEX CHX	root/protoplasts	Original data	GEO bulk
1864	WT Shoot-Pi	0.73 >More info	-0.15 >More info	WT Shoot+Pi		shoots	Original data	GEO bulk
1865	Polysomal RNA 35S:HF-RPL18 cold	0.73 >More info	-0.15 >More info	Polysomal RNA csp1 cold	12h cold (4C)	rosettes	Original data	GEO bulk
1866	penta Alternaria 3dpi	0.73 >More info	-0.15 >More info	Laer Alternaria 3dpi		leaf discs	Original data	GEO bulk
1867	Col-0 DCA 48h	0.73 >More info	-0.15 >More info	Col-0 MOCK 48h			Original data	GEO bulk
1868	penta mutant (higher order mutant)	0.73 >More info	-0.15 >More info	col control (higher order mutant)			Original data	GEO bulk
1869	mutant	0.73 >More info	-0.15 >More info	Anther		anther	Original data
1870	Tsu-1 -Fe 24h	0.73 >More info	-0.15 >More info	Tsu-1 +Fe 24h		roots	Original data	GEO bulk
1871	Methyl Jasmonate 1 h	0.73 >More info	-0.15 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
1872	nia1nia2noa1-2	0.73 >More info	-0.15 >More info	Col-0		whole seedlings	Original data	GEO bulk
1873	Col-0 drought	0.73 >More info	-0.15 >More info	Col-0 control			Original data	GEO bulk
1874	FLIGHT TAGESB plate	0.73 >More info	-0.15 >More info	GROUND CONTROL TAGESB plate			Original data
1875	rdr6-11	0.73 >More info	-0.15 >More info	Col-0		aerial tissue	Original data
1876	short 12-degree-	0.73 >More info	-0.16 >More info	control short			Original data	GEO bulk
1877	GRX-overexpression seedlings IAA	0.73 >More info	-0.16 >More info	WT seedlings IAA		Seedlings	Original data	GEO bulk
1878	HSP90 Reduced hsp90.2	0.73 >More info	-0.16 >More info	HSP90 Reduced Control		All aerial tissue	Original data	GEO bulk
1879	arp6-10 2h 27 -degree-C	0.73 >More info	-0.16 >More info	Col-0 2h at 27 ºC		whole seedlings	Original data	GEO bulk
1880	stele pSHR 8h BL	0.73 >More info	-0.16 >More info	stele pSHR 0h BL	brassinosteroid	root	Original data
1881	Primisulfuron EC50	0.73 >More info	-0.16 >More info	Carrier (primisulfuron)			Original data	GEO bulk
1882	high-R:FR bud uppermost	0.73 >More info	-0.16 >More info	low-R:FR bud uppermost	high R	rosette axillary bud n	Original data	GEO bulk
1883	35S:RPS4 rrs1-11 2h	0.73 >More info	-0.16 >More info	35S:RPS4 2h		leaves	Original data
1884	Mutant ufo-1(flower)	0.73 >More info	-0.16 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
1885	24h +Pi	0.73 >More info	-0.16 >More info	24h -Pi		root	Original data	GEO bulk
1886	Leaf systemic	0.73 >More info	-0.16 >More info	Leaf control		vegetative leaf	Original data	GEO bulk
1887	Stamen stage15	0.73 >More info	-0.16 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1888	GRX-overexpression seedlings MV	0.73 >More info	-0.16 >More info	WT seedlings MV		Seedlings	Original data	GEO bulk
1889	rhd2	0.73 >More info	-0.16 >More info	WT		Small excised segments of primary root tissue corresponding to root-hair elongation zone	Original data	GEO bulk
1890	Whole root - low pH 3H	0.73 >More info	-0.16 >More info	Whole root - Std pH 3H	pH 4.6 for 3 hr		Original data	GEO bulk
1891	Infected pft1 leaf	0.73 >More info	-0.16 >More info	Infected Col-0 leaf	F. oxysporum	leaf	Original data	GEO bulk
1892	Imbibed 3 h (seed)	0.73 >More info	-0.16 >More info	Dry seed			Original data	Time course of early seed germination
1893	petiole in FRD	0.73 >More info	-0.16 >More info	petiole in WL		petioles	Original data	GEO bulk
1894	abi4-102 -lincomycin	0.73 >More info	-0.16 >More info	Col-0 -lincomycin			Original data	GEO bulk
1895	Tsu-1 -Fe 48h	0.73 >More info	-0.16 >More info	Tsu-1 +Fe 24h		roots	Original data	GEO bulk
1896	whole roots -Fe 12 hour	0.73 >More info	-0.16 >More info	whole roots standard			Original data	GEO bulk
1897	UV Stress 24 h (shoot)	0.73 >More info	-0.16 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
1898	PNO8 3 h	0.73 >More info	-0.16 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
1899	WT-SA	0.73 >More info	-0.16 >More info	WT-mock spray	1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
1900	Col light-dark EtOH	0.73 >More info	-0.16 >More info	Col light-dark Mock	2.5% ethanol		Original data	GEO bulk
1901	vtc2 mature somatic embryo	0.73 >More info	-0.16 >More info	WT mature somatic embryo		mature somatic embryo	Original data	GEO bulk
1902	cpr5	0.73 >More info	-0.16 >More info	WT		seedling	Original data	GEO bulk
1903	Section Root from70 mm to 340 mm harvested immediately	0.73 >More info	-0.16 >More info	Control for tissue data			Original data	GEO bulk
1904	per1 in Pi deficiency medium	0.73 >More info	-0.16 >More info	Col in Pi deficiency medium		root	Original data	GEO bulk
1905	naxillin 3h	0.73 >More info	-0.16 >More info	before treatment	naxillin	root	Original data	GEO bulk
1906	cpr5 sim smr1	0.73 >More info	-0.16 >More info	WT		seedling	Original data	GEO bulk
1907	Tsu -Fe 48h Roots	0.73 >More info	-0.16 >More info	Tsu +Fe 24h Roots			Original data	GEO bulk
1908	upf3	0.73 >More info	-0.16 >More info	WT		whole plant	Original data	GEO bulk
1909	petiole in D	0.73 >More info	-0.16 >More info	petiole in WL		petioles	Original data	GEO bulk
1910	SCR-GR Time 6H Dex	0.73 >More info	-0.16 >More info	SCR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk
1911	Leaf wounded	0.73 >More info	-0.16 >More info	Leaf control		vegetative leaf	Original data	GEO bulk
1912	ABA JA 3h	0.73 >More info	-0.16 >More info	EtOH 3h	3hr		Original data	GEO bulk
1913	HRE1-RNAi20 hypoxia 6 hrs	0.73 >More info	-0.16 >More info	Col upon hypoxia 6 hrs	hypoxia	seedling roots	Original data	GEO bulk
1914	gun1-9 control	0.73 >More info	-0.16 >More info	Col-0 control			Original data	GEO bulk
1915	WT (Col-0) inflorescence drought day 4	0.73 >More info	-0.16 >More info	WT (Col-0) inflorescence well-watered day 4		Unopen flower buds	Original data	GEO bulk
1916	T101A 10mM NH4NO3	0.73 >More info	-0.16 >More info	col 10mM NH4NO3		Root	Original data
1917	pip3 At2g19270 RNAi 32	0.73 >More info	-0.17 >More info	Nd-1		whole plant	Original data	GEO bulk
1918	root cortex -S	0.73 >More info	-0.17 >More info	root cortex pH5.7			Original data	GEO bulk
1919	general seed coat linear-cotyledon	0.73 >More info	-0.17 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
1920	Col-0 root drought	0.73 >More info	-0.17 >More info	Col-0 root water		root	Original data	GEO bulk
1921	Transgenic LEC2GR Seedling 1h Dex	0.73 >More info	-0.17 >More info	Transgenic LEC2GR Seedling 0h Dex			Original data	GEO bulk
1922	WT-elf18	0.73 >More info	-0.17 >More info	WT-mock infiltration	10 µM elf18 for 2 hrs (infiltration into leaves)	mature leaf	Original data	GEO bulk
1923	eif3h non-polysome	0.73 >More info	-0.17 >More info	WT non-polysome			Original data	GEO bulk
1924	IXB induced	0.73 >More info	-0.17 >More info	Methanol IXB		Suspension cells	Original data	GEO bulk
1925	sex1-3	0.73 >More info	-0.17 >More info	Col-WT		leaves	Original data	GEO bulk
1926	penta Control	0.73 >More info	-0.17 >More info	Laer Control		leaf discs	Original data	GEO bulk
1927	SA 3h	0.73 >More info	-0.17 >More info	EtOH 3h	3hr		Original data	GEO bulk
1928	WT-drought	0.73 >More info	-0.17 >More info	WT-control		leaf	Original data
1929	Al treated	0.73 >More info	-0.17 >More info	control			Original data	GEO bulk
1930	P.p 2.5hai	0.73 >More info	-0.17 >More info	At-Control		roots	Original data	GEO bulk
1931	aba1 hypocotyl	0.73 >More info	-0.17 >More info	Ler hypocotyl		hypocotyl	Original data	GEO bulk
1932	ceh1 mutant	0.73 >More info	-0.17 >More info	Parent line			Original data
1933	piffq 2d WL	0.73 >More info	-0.17 >More info	WT 2d WL		whole seedling	Original data	GEO bulk
1934	Van	0.73 >More info	-0.17 >More info	Col-0			Original data	GEO bulk
1935	CAX1/CAX3 mutant	0.73 >More info	-0.17 >More info	Col		whole plant	Original data	GEO bulk
1936	Fenclorim 4hr	0.73 >More info	-0.17 >More info	Acetone 4hr		root	Original data	GEO bulk
1937	MYB51 OE	0.73 >More info	-0.17 >More info	WT for ATR1/MYB51			Original data	GEO bulk
1938	JMJ24 knockout	0.73 >More info	-0.17 >More info	WT			Original data	GEO bulk
1939	Glyphosate EC50	0.73 >More info	-0.17 >More info	Carrier (Glyphosate)			Original data	GEO bulk
1940	WT 24H Cold	0.73 >More info	-0.17 >More info	WT control			Original data	GEO bulk
1941	WT roots - Fe	0.73 >More info	-0.17 >More info	WT roots + Fe		Roots	Original data	GEO bulk
1942	til1-1 22C	0.73 >More info	-0.17 >More info	Col-0 22C			Original data	GEO bulk
1943	Base wox4	0.73 >More info	-0.17 >More info	Base Col		base of stem	Original data	GEO bulk
1944	Col0 roots 2hr KNO3 nitrogen	0.73 >More info	-0.17 >More info	Col0 roots 2hr KCl control		root	Original data	GEO bulk
1945	CMP 24hr	0.73 >More info	-0.17 >More info	Acetone 24hr		root	Original data	GEO bulk
1946	myb21 myb24 stage2	0.73 >More info	-0.17 >More info	WT stage2			Original data	GEO bulk
1947	Elevated CO2 fully expanded leaf	0.73 >More info	-0.18 >More info	Ambient CO2 fully expanded leaf		fully expanded leaf	Original data
1948	col-5 hrpA 4h	0.73 >More info	-0.18 >More info	col-5 MgCl2 4h		Whole leaf	Original data	GEO bulk
1949	oligomycin 4 h	0.73 >More info	-0.18 >More info	mock 4 h	4 h_oligo	seedling culture	Original data	GEO bulk
1950	wrky33 Bc inoculation 14h	0.73 >More info	-0.18 >More info	wrky33 mock	14 hour post inoculation with spores of Botrytis cinerea 2100	leaves	Original data
1951	IAA/inhibitor A Treated	0.73 >More info	-0.18 >More info	IAA Treated			Original data	GEO bulk
1952	Laer pretreat GA Flg22 0h	0.73 >More info	-0.18 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
1953	ws 24h4c q8ws	0.73 >More info	-0.18 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
1954	KO-nudx19 leaves	0.73 >More info	-0.18 >More info	WT leaves		rosette leaves	Original data
1955	grf1/grf2/grf3	0.73 >More info	-0.18 >More info	WS			Original data	GEO bulk
1956	Atwrky40	0.73 >More info	-0.18 >More info	Col0	none	leaf	Original data	GEO bulk
1957	1hr-pH4.5	0.73 >More info	-0.18 >More info	1hr-pH6	1hr pH 4.5	roots	Original data	GEO bulk
1958	SIV pollen tube	0.73 >More info	-0.18 >More info	drypollen		Semi in vivo-grown pollen tubes	Original data	GEO bulk
1959	max4 hypocotyl	0.73 >More info	-0.18 >More info	wt hypocotyl		hypocotyl	Original data	GEO bulk
1960	etr1 1% sucrose 12-day-old	0.73 >More info	-0.18 >More info	Col-0 1% sucrose 12-day-old			Original data	GEO bulk
1961	opr3 JA 0.5 h	0.73 >More info	-0.18 >More info	opr3 0 h			Original data	GEO bulk
1962	light	0.73 >More info	-0.18 >More info	dark	light	seedling	Original data	GEO bulk
1963	Dark 3day ivd	0.73 >More info	-0.18 >More info	0h ivd			Original data
1964	abi4-102 (II)	0.73 >More info	-0.18 >More info	Col (II)		rosette	Original data	GEO bulk
1965	camta1/2/3 24h cold	0.73 >More info	-0.18 >More info	WT 24h cold	24h cold	entire aerial part	Original data	GEO bulk
1966	Botrytis cinerea 48h	0.73 >More info	-0.18 >More info	control 48h			Original data	GEO bulk
1967	ERF115OE roottip5days	0.73 >More info	-0.18 >More info	Col-0 roottip5days		root tips	Original data
1968	kyp protoplast	0.73 >More info	-0.18 >More info	Ler protoplast		protoplast	Original data	GEO bulk
1969	pip3 At2g19270 TDNA 6h-1	0.73 >More info	-0.18 >More info	Col-0		whole plant	Original data	GEO bulk
1970	gai Control	0.73 >More info	-0.18 >More info	Laer Control		leaf discs	Original data	GEO bulk
1971	-Sulfate 24 h	0.73 >More info	-0.18 >More info	Mock 24 h (1500uM sulfate)			Original data	Response to sulfate limitation
1972	root cap pGL2(QC pSCRBRI1) 3h BL	0.73 >More info	-0.18 >More info	root cap pGL2(QC pSCRBRI1) 0h BL	brassinosteroid	root	Original data
1973	JA 3h	0.73 >More info	-0.18 >More info	EtOH 3h	3hr		Original data	GEO bulk
1974	35S::RSL4	0.73 >More info	-0.18 >More info	Col-0 Control		root	Original data	GEO bulk
1975	tt4	0.73 >More info	-0.18 >More info	Col-0		aerial part	Original data
1976	chalazal seed coat linear-cotyledon	0.73 >More info	-0.18 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
1977	agb1 +ABA LF	0.73 >More info	-0.18 >More info	Col-0 +ABA LF		Leaves of five week-old plants	Original data	GEO bulk
1978	Ler 20C long-day	0.73 >More info	-0.18 >More info	Ler 20C short-day		seeds	Original data	GEO bulk
1979	leaf13	0.73 >More info	-0.18 >More info	unwounded leaves	none		Original data	GEO bulk
1980	5-Triiodobenzoic acid3 h	0.73 >More info	-0.18 >More info	Mock 3 h			Original data	Effect of auxin inhibitors on seedlings
1981	edr1 36 h powdery mildew	0.73 >More info	-0.18 >More info	Col-0 36 h powdery mildew			Original data	GEO bulk
1982	glk1 glk2 GLK1-GR +DEX 24h	0.73 >More info	-0.18 >More info	glk1 glk2 GLK1-GR mock 24h	dexamethasone	whole seedlings	Original data	GEO bulk
1983	wermyb2	0.73 >More info	-0.18 >More info	Col			Original data	GEO bulk
1984	sicy-192 gun1-101 cotyledons	0.73 >More info	-0.18 >More info	WT cotyledons		cotyledons	Original data
1985	Leafminer locally damaged thaliana seedlings	0.73 >More info	-0.19 >More info	Undamaged thaliana seedlings	locally damaged by leafminer	leaves	Original data	GEO bulk
1986	Petals stage15	0.73 >More info	-0.19 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
1987	Col-0 under 4 days salt	0.73 >More info	-0.19 >More info	Col-0 under control	4 days salt treatment	rosette	Original data
1988	pho1	0.73 >More info	-0.19 >More info	Col2WT			Original data	GEO bulk
1989	estradiole-induced ANAC059	0.73 >More info	-0.19 >More info	transgenic (empty vector inducible system)			Original data	GEO bulk
1990	WT Bc inoculation 14h	0.73 >More info	-0.19 >More info	WT mock	14 hour post inoculation with spores of Botrytis cinerea 2100	leaves	Original data
1991	ice1 24H Cold	0.73 >More info	-0.19 >More info	WT 24H Cold			Original data	GEO bulk
1992	root longitudinal zone-2 pH 4.6	0.73 >More info	-0.19 >More info	root longitudinal zone-2 pH 5.7			Original data	GEO bulk
1993	Col-0 DCA 6d	0.73 >More info	-0.19 >More info	Col-0 MOCK 6d			Original data	GEO bulk
1994	Pst-DC3000(avrRpm1)-4hpi	0.73 >More info	-0.19 >More info	Pst-DC3000-4hpi			Original data	GEO bulk
1995	C24-1h IAA	0.73 >More info	-0.19 >More info	C24-0h IAA		whole plant	Original data	GEO bulk
1996	miR396b overexpressor	0.73 >More info	-0.19 >More info	Col-0		vegetative apices together with the leaf primordia	Original data
1997	35S:miR396	0.73 >More info	-0.19 >More info	WT		0 days-old seedlings.	Original data	GEO bulk
1998	gpa1-4/agb1-2 clean-air 3h	0.73 >More info	-0.19 >More info	Col clean-air 3h	clean-air		Original data	GEO bulk
1999	12h volatiles Sp. HRO-C48	0.73 >More info	-0.19 >More info	12h untreated		whole seedling	Original data	GEO bulk
2000	WT leaves - Fe	0.73 >More info	-0.19 >More info	WT leaves + Fe		Leaves	Original data	GEO bulk
2001	35:SUB1A	0.73 >More info	-0.19 >More info	WT		whole seedling	Original data	GEO bulk
2002	ERF96OE	0.73 >More info	-0.19 >More info	WT		leaf	Original data
2003	12h-DC3000 hrpA	0.73 >More info	-0.19 >More info	12h-DC3000		leaves	Original data	GEO bulk
2004	OE-HRA1 NS	0.73 >More info	-0.19 >More info	Col-0NS	2 h non-stress (2NS)	7-day-old seedlings	Original data
2005	epiF3	0.73 >More info	-0.19 >More info	WT Col-0		aerial part	Original data
2006	atsf1-2 mutant seedling	0.73 >More info	-0.19 >More info	Col-0 seedling		seedlings	Original data
2007	amiR-tor induced 6d	0.73 >More info	-0.19 >More info	amiR-tor 6d C	6 days estradiol-treated	seedlings	Original data	GEO bulk
2008	ref6-1	0.73 >More info	-0.19 >More info	Col		whole seedling	Original data	GEO bulk
2009	ga1 KAR1 24h seed	0.73 >More info	-0.19 >More info	Ler KAR1 24h seed	KAR1	seed	Original data	GEO bulk
2010	shoots bhlh100/101 100uM Fe	0.73 >More info	-0.19 >More info	shoots WT 100uM Fe	100uM Fe	shoots	Original data	GEO bulk
2011	24h light (+Lincomycin)	0.73 >More info	-0.19 >More info	24h light (-Lincomycin)		seedlings	Original data	GEO bulk
2012	ein2-1 +Pep2 2h	0.73 >More info	-0.20 >More info	WT +Pep2 2h	Pep2		Original data	GEO bulk
2013	Total RNA 35S:AtCSP1-FH1	0.73 >More info	-0.20 >More info	Total RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
2014	essp4/sdg8-5 mutant	0.73 >More info	-0.20 >More info	wild type		leaf	Original data	GEO bulk
2015	P.p 10.5hai	0.73 >More info	-0.20 >More info	At-Control		roots	Original data	GEO bulk
2016	LEAFY-GR DEX +CHX	0.73 >More info	-0.20 >More info	LEAFY-GR CHX	Dexamethasone plus cycloheximide	seedlings	Original data	GEO bulk
2017	LTN014-2 aza-dc+TSA	0.73 >More info	-0.20 >More info	LTN012-2 Mock			Original data
2018	arp6-10 24h at 27 ºC	0.73 >More info	-0.20 >More info	Col-0 24h at 27 ºC		whole seedlings	Original data	GEO bulk
2019	tor mutant	0.73 >More info	-0.20 >More info	WT (Col)	none	seedlings	Original data	GEO bulk
2020	dcl2-1	0.73 >More info	-0.20 >More info	Col-0			Original data	GEO bulk
2021	35SPaWRKY1	0.73 >More info	-0.20 >More info	Vector		Seedlings including shoot and root	Original data	GEO bulk
2022	GR:KAN1 DEX WL	0.73 >More info	-0.20 >More info	GR:KAN1 Mock WL		seedlings	Original data
2023	pif1pif3pif4pif5 mutant (pifq)	0.73 >More info	-0.20 >More info	WT (col)			Original data	GEO bulk
2024	OE WRKY63.3	0.73 >More info	-0.20 >More info	OE WRKY40.4	none	leaf	Original data	GEO bulk
2025	root Dosed gold	0.73 >More info	-0.20 >More info	root No gold	.125 mM gold 24 h	roots	Original data
2026	fls1-3	0.73 >More info	-0.20 >More info	Col-0		Rosette leaves	Original data
2027	sid2-avrB-6h	0.73 >More info	-0.20 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
2028	root cap pGL2 8h BL	0.73 >More info	-0.20 >More info	root cap pGL2 0h BL	brassinosteroid	root	Original data
2029	Cycloheximide 3 h	0.73 >More info	-0.20 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
2030	TA induced	0.73 >More info	-0.20 >More info	Methanol TA		Suspension cells	Original data	GEO bulk
2031	IPT8 mutant tZ 12h	0.73 >More info	-0.20 >More info	Control 12h	12 hours	primary root tip (5 mm)	Original data	GEO bulk
2032	miR PSTDC3000 24h	0.73 >More info	-0.20 >More info	Col PSTDC3000 24h		Leaf	Original data	GEO bulk
2033	rpl24 polysome	0.73 >More info	-0.20 >More info	WT polysome		seedling shoot/aerial seedling	Original data
2034	Atwrky40 high light	0.73 >More info	-0.20 >More info	Col0 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
2035	Total RNA 35S:HF-RPL18	0.73 >More info	-0.20 >More info	Total RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
2036	SHR-GR Time 6H Dex	0.73 >More info	-0.20 >More info	SHR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk
2037	current injection	0.73 >More info	-0.20 >More info	no current injection	4 microampere of electric current for 1 second		Original data	GEO bulk
2038	sim smr1	0.73 >More info	-0.20 >More info	WT		seedling	Original data	GEO bulk
2039	oligomycin 1 h	0.73 >More info	-0.20 >More info	mock 1 h	1 h_oligo	seedling culture	Original data	GEO bulk
2040	VND7XVE	0.73 >More info	-0.20 >More info	VND7XVE Control	cycloheximide+estradiol		Original data	GEO bulk
2041	0.125 mM gold 24 h	0.73 >More info	-0.20 >More info	root	0.125 mM gold 24 h	roots	Original data	GEO bulk
2042	OE WRKY63.3 high light	0.73 >More info	-0.20 >More info	OE WRKY40.4 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
2043	pmr4-1 control	0.73 >More info	-0.20 >More info	WT control	uninoculated		Original data	GEO bulk
2044	Laer pretreat JA Flg22 2h	0.73 >More info	-0.20 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2045	WT NAA 1h	0.73 >More info	-0.21 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2046	mkk2 24h BTH rep	0.73 >More info	-0.21 >More info	Col-0 24h BTH rep			Original data	GEO bulk
2047	P.p 6hai	0.73 >More info	-0.21 >More info	At-Control		roots	Original data	GEO bulk
2048	BI-1-1h IAA	0.73 >More info	-0.21 >More info	BI-1-0h IAA		whole plant	Original data	GEO bulk
2049	irradiated leaf (WT 1d)	0.73 >More info	-0.21 >More info	control leaf (WT 1d)		rosette leaf only	Original data	GEO bulk
2050	root columella root cap -S	0.73 >More info	-0.21 >More info	root columella root cap pH5.7			Original data	GEO bulk
2051	12h volatiles Sm. R3089	0.73 >More info	-0.21 >More info	12h untreated		whole seedling	Original data	GEO bulk
2052	edr1 0 h powdery mildew	0.73 >More info	-0.21 >More info	Col-0 0 h powdery mildew			Original data	GEO bulk
2053	cpr5scv1	0.73 >More info	-0.21 >More info	WT(COL)			Original data	GEO bulk
2054	Laer pretreat GA Flg22 2h	0.73 >More info	-0.21 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2055	S5	0.73 >More info	-0.21 >More info	WT			Original data	GEO bulk
2056	eif3h	0.73 >More info	-0.21 >More info	WT			Original data	GEO bulk
2057	WT+H2O2	0.73 >More info	-0.21 >More info	WT	H2O2		Original data	GEO bulk
2058	mbd6 mutant thaliana 10-day-old seedling	0.73 >More info	-0.21 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
2059	erf5 erf6 +chitooctaose	0.73 >More info	-0.21 >More info	WT+chitooctaose	chitooctaose	seedlings	Original data	GEO bulk
2060	phr1 Root-Pi	0.73 >More info	-0.21 >More info	WT Root+Pi		roots	Original data	GEO bulk
2061	low CO2 + light	0.73 >More info	-0.21 >More info	normal CO2 + light			Original data	GEO bulk
2062	t-zeatin 0.5 h	0.73 >More info	-0.21 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
2063	Bay-0-1h IAA	0.73 >More info	-0.21 >More info	Bay-0-0h IAA		whole plant	Original data	GEO bulk
2064	C2 leaf-drought	0.73 >More info	-0.21 >More info	C2 leaf-well watered			Original data	GEO bulk
2065	Light 3day hml	0.73 >More info	-0.21 >More info	0h hml			Original data
2066	4d red light grown hmr-22 seedlings	0.73 >More info	-0.21 >More info	4d red light grown WT(Col-0) seedlings			Original data
2067	des1 Na2S	0.73 >More info	-0.21 >More info	WT Na2S	Na2S	leaf	Original data	GEO bulk
2068	t-zeatin 3 h	0.73 >More info	-0.21 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
2069	ppi2	0.73 >More info	-0.21 >More info	WT		whole plant	Original data	GEO bulk
2070	LTN008-2 aza-dc	0.73 >More info	-0.21 >More info	LTN012-2 Mock			Original data
2071	WT powdery mildew	0.73 >More info	-0.21 >More info	WT control	inoculation with the powdery mildew pathogen		Original data	GEO bulk
2072	phosphate-starved	0.73 >More info	-0.21 >More info	control		shoot tissue	Original data	GEO bulk
2073	IPT8 induced 12h	0.73 >More info	-0.21 >More info	Control 12h	12 hours	primary root tip (5 mm)	Original data	GEO bulk
2074	Leafminer systemically damaged thaliana seedlings	0.73 >More info	-0.21 >More info	Undamaged thaliana seedlings	systemically damaged by leafminer	leaves	Original data	GEO bulk
2075	Whole root - S 3H	0.73 >More info	-0.21 >More info	Whole root - S 0H			Original data	GEO bulk
2076	GST-overexpression seedlings control	0.73 >More info	-0.21 >More info	WT seedlings control		Seedlings	Original data
2077	Inflorescence miR-NGA	0.73 >More info	-0.22 >More info	Inflorescence wt			Original data	GEO bulk
2078	Rose Bengal 0.5 uM	0.73 >More info	-0.22 >More info	Control RB and PER	Rose Bengal		Original data
2079	WT 3H Cold	0.73 >More info	-0.22 >More info	WT control			Original data	GEO bulk
2080	35S::MBF1c	0.73 >More info	-0.22 >More info	control			Original data	GEO bulk
2081	Shoot -Cs	0.73 >More info	-0.22 >More info	Control-shoot			Original data	GEO bulk
2082	pnp1-1 1wk -P	0.73 >More info	-0.22 >More info	WT 1wk -P	No phosphate medium	seedlings without roots	Original data	GEO bulk
2083	cov1 cov2 stem Base	0.73 >More info	-0.22 >More info	WT stem Base		stem Base	Original data	GEO bulk
2084	Bay-0-30min IAA	0.73 >More info	-0.22 >More info	Bay-0-0h IAA		whole plant	Original data	GEO bulk
2085	high-R:FR bud axillary	0.73 >More info	-0.22 >More info	low-R:FR bud axillary	high R	rosette axillary bud n-2	Original data	GEO bulk
2086	camta1/3 warm	0.73 >More info	-0.22 >More info	WT warm		entire aerial part	Original data	GEO bulk
2087	WT H2O2 3h	0.73 >More info	-0.22 >More info	WT water 3h	3h_H2O2		Original data	GEO bulk
2088	mutant-line348	0.73 >More info	-0.22 >More info	WT-control		whole plant	Original data	GEO bulk
2089	gpa1 -ABA LF	0.73 >More info	-0.22 >More info	Col-0 -ABA LF		Leaves of five week-old plants	Original data	GEO bulk
2090	ANAC102 knock-out low oxygen	0.73 >More info	-0.22 >More info	Col-0 low oxygen			Original data	GEO bulk
2091	rosette Light Wounded	0.73 >More info	-0.22 >More info	rosette Light Control			Original data	GEO bulk
2092	HopZ1a treated ulp1c ulp1d	0.73 >More info	-0.22 >More info	col			Original data	GEO bulk
2093	W(Liq) L-AOPP+IAA	0.73 >More info	-0.22 >More info	W(Liq) Mock		whole plant	Original data	GEO bulk
2094	PNO8 12 h	0.73 >More info	-0.22 >More info	Mock 12 h			Original data	Effect of other inhibitors on seedlings
2095	seedling 1.5h after Gamma atm-1	0.73 >More info	-0.22 >More info	seedling day 1 unirradiated atm-1	1.5h		Original data
2096	WT 90-105 min Xanthomonas	0.73 >More info	-0.22 >More info	WT T0			Original data	GEO bulk
2097	gir flower 33d	0.73 >More info	-0.22 >More info	Col-7 flower 33d		flower	Original data	GEO bulk
2098	rpl24 nonpolysome	0.73 >More info	-0.22 >More info	WT nonpolysome		seedling shoot/aerial seedling	Original data
2099	gul2-1 mutant	0.73 >More info	-0.22 >More info	WT		7 day-old whole seedlings	Original data
2100	ABA	0.73 >More info	-0.22 >More info	control			Original data	GEO bulk
2101	mkk1/mkk2 control rep	0.73 >More info	-0.22 >More info	Col-0 Time 0 rep			Original data	GEO bulk
2102	Laer GA 1h	0.73 >More info	-0.22 >More info	Laer Control		leaf discs	Original data	GEO bulk
2103	mkk1/mkk2 24h BTH rep	0.73 >More info	-0.22 >More info	Col-0 24h BTH rep			Original data	GEO bulk
2104	Mutant iaa5_6_19	0.73 >More info	-0.22 >More info	Col			Original data	GEO bulk
2105	Sulfometuron EC50	0.73 >More info	-0.22 >More info	Carrier			Original data	GEO bulk
2106	msh1 recA3 untreated	0.73 >More info	-0.22 >More info	WT untreated		above-ground parts	Original data	GEO bulk
2107	Bur-0-1h IAA	0.73 >More info	-0.22 >More info	Bur-0h IAA		whole plant	Original data	GEO bulk
2108	Elevated CO2 AMPLE N NIGHT	0.73 >More info	-0.23 >More info	Ambient CO2 AMPLE N NIGHT		Youngest Most Fully Expanded Leaf	Original data
2109	Shoot -P	0.73 >More info	-0.23 >More info	Shoot Mock	P_starvation 10-day Phosphate starvation		Original data	GEO bulk
2110	WT leaf-drought	0.73 >More info	-0.23 >More info	WT leaf-well watered			Original data	GEO bulk
2111	ABA SA 3h	0.73 >More info	-0.23 >More info	EtOH 3h	3hr		Original data	GEO bulk
2112	fus3-3 8 DAF Seed	0.73 >More info	-0.23 >More info	WT (Col-0) 8 DAF Seed		developing seeds dissected from sliques	Original data
2113	apk1 apk2	0.73 >More info	-0.23 >More info	Col0-control		whole rosette	Original data	GEO bulk
2114	Fei-0-1h IAA	0.73 >More info	-0.23 >More info	Fei-0-0h IAA		whole plant	Original data	GEO bulk
2115	tetraploid	0.73 >More info	-0.23 >More info	diploid			Original data	GEO bulk
2116	rsl4	0.73 >More info	-0.23 >More info	Col-0 Control		root	Original data	GEO bulk
2117	Te 3d	0.73 >More info	-0.23 >More info	Te CA		Leaves	Original data
2118	Polysomal RNA 35S:HF-RPL18	0.73 >More info	-0.23 >More info	Polysomal RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
2119	D2O	0.73 >More info	-0.23 >More info	H2O		seedling	Original data	GEO bulk
2120	non-polysome mRNA eif3k	0.73 >More info	-0.23 >More info	non-polysome mRNA WT		aerial part	Original data	GEO bulk
2121	35S::HRE1 Aerobic	0.73 >More info	-0.23 >More info	Col-0 wt Aerobic	untreated control		Original data	GEO bulk
2122	opr3 OPDA 0.5 h	0.73 >More info	-0.23 >More info	opr3 0 h			Original data	GEO bulk
2123	col-5 DC3000 4h	0.73 >More info	-0.23 >More info	col-5 MgCl2 4h		Whole leaf	Original data	GEO bulk
2124	pip3 At2g19270 TDNA 1	0.73 >More info	-0.23 >More info	Col-0		whole plant	Original data	GEO bulk
2125	aintegumenta-1	0.73 >More info	-0.23 >More info	Col-0			Original data	GEO bulk
2126	hrpA 7h	0.73 >More info	-0.23 >More info	Mock 7h	hrpA		Original data	GEO bulk
2127	mutant acs2B (single mutant)	0.73 >More info	-0.23 >More info	col control (single mutant)			Original data	GEO bulk
2128	Col-0 C2H4 24h	0.73 >More info	-0.23 >More info	Col-0 air	4 hour ethylene gas (10 ppm)		Original data	GEO bulk
2129	seedling -S Exp	0.73 >More info	-0.23 >More info	seedling FN Exp		seedling	Original data
2130	chito-tetramer	0.73 >More info	-0.24 >More info	Col Mock			Original data	GEO bulk
2131	Col-0 +lincomycin	0.73 >More info	-0.24 >More info	Col-0 -lincomycin			Original data	GEO bulk
2132	mutant acs5C (single mutant)	0.73 >More info	-0.24 >More info	col control (single mutant)			Original data	GEO bulk
2133	AvrRpt2 Col-0 6hpi	0.73 >More info	-0.24 >More info	AvrRpt2 Col-0 0hpi	Infiltration of Psm	mature leaf	Original data
2134	QC pSCR(QC pSCRBRI1) 3h BL	0.73 >More info	-0.24 >More info	QC pSCR(QC pSCRBRI1) 0h BL	brassinosteroid	root	Original data
2135	seedling 24h after HZE atm-1	0.73 >More info	-0.24 >More info	seedling day 2 unirradiated atm-1	24h		Original data
2136	NaCl wermyb2	0.73 >More info	-0.24 >More info	NaCl Col			Original data	GEO bulk
2137	rcf1-1 cold 24h	0.73 >More info	-0.24 >More info	WT cold 24h	cold at 4°C	seedlings	Original data	GEO bulk
2138	Col-0 red light	0.73 >More info	-0.24 >More info	Col-0 dark			Original data	GEO bulk
2139	AtNIGT1/HRS1 +CHX + DEX + Nitrate	0.73 >More info	-0.24 >More info	AtNIGT1/HRS1 +CHX - DEX + Nitrate			Original data
2140	E.orontii Infection 3 day	0.73 >More info	-0.24 >More info	Uninfection 3 day			Original data	Elicitor treatments
2141	downy mildew cotyledons late stage	0.73 >More info	-0.24 >More info	mock inoculated		Cotyledons	Original data	GEO bulk
2142	Cor 24h	0.73 >More info	-0.24 >More info	Mock 24h	Cor		Original data	GEO bulk
2143	miR 0h	0.73 >More info	-0.24 >More info	Col 0h		Leaf	Original data	GEO bulk
2144	OE WRKY40.4 high light	0.73 >More info	-0.24 >More info	OE WRKY40.4 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
2145	akt1-1	0.73 >More info	-0.24 >More info	Ws-2		Seedlings	Original data	GEO bulk
2146	phyABCDE 4-day dark- 2 hours Rc50	0.73 >More info	-0.24 >More info	phyABCDE Dark	4-day dark growth followed by 2 hours of red light	whole seedling	Original data	GEO bulk
2147	cys-c1 leaf	0.73 >More info	-0.24 >More info	Leaf-WT		leaves	Original data	GEO bulk
2148	Te 1d	0.73 >More info	-0.24 >More info	Te CA		Leaves	Original data
2149	JA 24h	0.73 >More info	-0.24 >More info	EtOH 24h	24hr		Original data	GEO bulk
2150	root longitudinal zone-4 -Fe	0.73 >More info	-0.24 >More info	root longitudinal zone-4 standard			Original data	GEO bulk
2151	4h light (+Lincomycin)	0.73 >More info	-0.24 >More info	4h light (-Lincomycin)		seedlings	Original data	GEO bulk
2152	+1.6 mM Tween 20 1 h.	0.73 >More info	-0.24 >More info	+distilled water 1 h.			Original data	GEO bulk
2153	12m.KCl	0.73 >More info	-0.24 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
2154	IAA19mII over-expressor mock	0.73 >More info	-0.24 >More info	empty vector mock			Original data	GEO bulk
2155	rcf1-1 cold 12h	0.73 >More info	-0.24 >More info	WT cold 12 h	cold at 4°C	seedlings	Original data	GEO bulk
2156	QC pSCR(QC pSCRBRI1) 8h BL	0.73 >More info	-0.24 >More info	QC pSCR(QC pSCRBRI1) 0h BL	brassinosteroid	root	Original data
2157	atgsnor1-3-avrB-6h	0.73 >More info	-0.24 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
2158	naxillin 6h	0.73 >More info	-0.24 >More info	before treatment	naxillin	root	Original data	GEO bulk
2159	MIL4 ox BTH	0.73 >More info	-0.24 >More info	Col BTH			Original data	GEO bulk
2160	Imbibed 1 h (seed)	0.73 >More info	-0.24 >More info	Dry seed			Original data	Time course of early seed germination
2161	A. halleri control-root	0.73 >More info	-0.25 >More info	A. petraea control-root			Original data	GEO bulk
2162	VND6 12h	0.73 >More info	-0.25 >More info	wt 12h			Original data	GEO bulk
2163	pab total	0.73 >More info	-0.25 >More info	WT total		seedling shoot/aerial seedling	Original data
2164	Col-0 +ABA GC	0.73 >More info	-0.25 >More info	Col-0 -ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
2165	rpl24 total	0.73 >More info	-0.25 >More info	WT total		seedling shoot/aerial seedling	Original data
2166	T6 leaf-drought	0.73 >More info	-0.25 >More info	T6 leaf-well watered			Original data	GEO bulk
2167	ein5-1 ski2-3	0.73 >More info	-0.25 >More info	Col-0		aerial tissue	Original data
2168	4C 2h(SOIL)	0.73 >More info	-0.25 >More info	4C 0h(SOIL)			Original data	GEO bulk
2169	DC3000 2 h (leaf)	0.73 >More info	-0.25 >More info	Mock 2 h (leaf)			Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
2170	rdr2-1	0.73 >More info	-0.25 >More info	Col-0			Original data	GEO bulk
2171	bbx24 in With Light	0.73 >More info	-0.25 >More info	WT in With Light	light	seedling	Original data
2172	root protophloem 40 mM NaCl	0.73 >More info	-0.25 >More info	root protophloem			Original data	GEO bulk
2173	Total RNA 35S:AtCSP1-FH1 cold	0.73 >More info	-0.25 >More info	Total RNA csp1 cold	12h cold (4C)	rosettes	Original data	GEO bulk
2174	cat2-short-day 2d	0.73 >More info	-0.25 >More info	Col0-SD2	transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
2175	GV3101 6dpi	0.73 >More info	-0.25 >More info	Reference 6dpi		wounded inflorescence stalk segments	Original data	GEO bulk
2176	root cap pGL2 3h BL	0.73 >More info	-0.25 >More info	root cap pGL2 0h BL	brassinosteroid	root	Original data
2177	SIZ	0.73 >More info	-0.25 >More info	COL		seedling	Original data
2178	pvip1 pvip2	0.73 >More info	-0.25 >More info	Col-0		whole rosettes	Original data	GEO bulk
2179	FLIGHT TAGES 2B plate6 HYPOCOTYLS	0.73 >More info	-0.25 >More info	GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS		plant tissue	Original data
2180	Whole root - low pH 30min	0.73 >More info	-0.25 >More info	Whole root - Std pH 30min	pH 4.6 for 30 min		Original data	GEO bulk
2181	WT AntimycinA 3h	0.73 >More info	-0.25 >More info	WT water 3h	3h_AntimycinA		Original data	GEO bulk
2182	IRP1-OE-Ctrl--shoot	0.73 >More info	-0.25 >More info	COL-0-Ctrl--shoot		shoot	Original data
2183	WT +elf18 2h	0.73 >More info	-0.26 >More info	WT untreated	elf18		Original data	GEO bulk
2184	treated group	0.73 >More info	-0.26 >More info	Control group			Original data
2185	coi1-2	0.73 >More info	-0.26 >More info	Col-0 mock		Whole seedling	Original data	GEO bulk
2186	chito-octamer	0.73 >More info	-0.26 >More info	Col Mock			Original data	GEO bulk
2187	sicy-192 cotyledons	0.73 >More info	-0.26 >More info	WT cotyledons		cotyledons	Original data
2188	ORE1-IOE-2h+Est	0.73 >More info	-0.26 >More info	ORE1-IOE-2h+Mock	Estradiol	Whole seedling	Original data	GEO bulk
2189	Mature roots	0.73 >More info	-0.26 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
2190	Col-0-1h IAA	0.73 >More info	-0.26 >More info	Col-0-0h IAA		whole plant	Original data	GEO bulk
2191	fri-flc	0.73 >More info	-0.26 >More info	WT			Original data	GEO bulk
2192	ein3 eil1	0.73 >More info	-0.26 >More info	Col-0 mock		Whole seedling	Original data	GEO bulk
2193	Pto inoculated	0.73 >More info	-0.26 >More info	col			Original data	GEO bulk
2194	6-trichlorophenoxyacetic acid 3 h	0.73 >More info	-0.26 >More info	Mock 3 h			Original data	Effect of auxin inhibitors on seedlings
2195	QC	0.73 >More info	-0.26 >More info	Control for tissue data		FACS-sorted protoplasts from roots	Original data
2196	cpr5	0.73 >More info	-0.26 >More info	WT(COL)			Original data	GEO bulk
2197	abh1 -ABA	0.73 >More info	-0.26 >More info	Col-0 -ABA			Original data	GEO bulk
2198	col-5 hrpA 2h	0.73 >More info	-0.26 >More info	col-5 MgCl2 2h		Whole leaf	Original data	GEO bulk
2199	downy mildew cotyledons early stage	0.73 >More info	-0.26 >More info	mock inoculated		Cotyledons	Original data	GEO bulk
2200	WT polysome	0.73 >More info	-0.26 >More info	WT non-polysome			Original data	GEO bulk
2201	dcl3-1	0.73 >More info	-0.26 >More info	Col-0			Original data	GEO bulk
2202	ex2 flu dark 8hours/30 minute light	0.73 >More info	-0.26 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
2203	3d old, both 10mM sucrose and 0.2µM SMX	0.73 >More info	-0.26 >More info	control		Whole seedling	Original data	GEO bulk
2204	9m.KCl	0.73 >More info	-0.26 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
2205	WT no Pi	0.73 >More info	-0.26 >More info	WT complete		seedlings	Original data
2206	hsfa1 quadruple mutant	0.73 >More info	-0.26 >More info	WT (Col-0)		whole seedling	Original data	GEO bulk
2207	AB	0.73 >More info	-0.26 >More info	COL		seedling	Original data
2208	WT flg22 2h	0.73 >More info	-0.26 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2209	Mock pft1 leaf	0.73 >More info	-0.26 >More info	Mock Col-0 leaf	water	leaf	Original data	GEO bulk
2210	ga1 24h seed	0.73 >More info	-0.27 >More info	Ler WATER 24h seed	water	seed	Original data	GEO bulk
2211	vte1-1 3d vernalization	0.73 >More info	-0.27 >More info	WT 3d vernalization			Original data	GEO bulk
2212	2hr transitory KNO3 ECR cell	0.73 >More info	-0.27 >More info	2hr KCl control ECR cell		Epidermis&Cortex root cells	Original data	GEO bulk
2213	AFB1 flg22 2h	0.73 >More info	-0.27 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2214	Dry midday	0.73 >More info	-0.27 >More info	Wet midday	water-limited	whole rosette	Original data	GEO bulk
2215	IAA19mII over-expressor IAA Treated	0.73 >More info	-0.27 >More info	empty vector IAA Treated			Original data	GEO bulk
2216	pnp1-1 1wk +P	0.73 >More info	-0.27 >More info	WT 1wk +P	Full nutrient medium (+P)	seedlings without roots	Original data	GEO bulk
2217	Col-0 norflurazon	0.73 >More info	-0.27 >More info	Col-0 control			Original data	GEO bulk
2218	GA	0.73 >More info	-0.27 >More info	none	GA	Rosette	Original data	GEO bulk
2219	vtc1 (II)	0.73 >More info	-0.27 >More info	Col (II)		rosette	Original data	GEO bulk
2220	tumour	0.73 >More info	-0.27 >More info	non-tumor		tumour	Original data	GEO bulk
2221	WT resupplied Pi 4h	0.73 >More info	-0.27 >More info	WT complete		seedlings	Original data
2222	Col 1d	0.73 >More info	-0.27 >More info	Col CA		Leaves	Original data
2223	0h light (+Lincomycin)	0.73 >More info	-0.27 >More info	0h light (-Lincomycin)		seedlings	Original data	GEO bulk
2224	TNT-seedlings	0.73 >More info	-0.27 >More info	DMF-control-seedlings	TNT-treated-seedlings	whole plant	Original data	GEO bulk
2225	nia1nia2	0.73 >More info	-0.27 >More info	Col-0		whole seedlings	Original data	GEO bulk
2226	WT NAA 2h	0.73 >More info	-0.27 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2227	Chemically	0.73 >More info	-0.27 >More info	Solvent	treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid	whole seedlings	Original data
2228	P35S:rGRF3	0.73 >More info	-0.27 >More info	WS			Original data	GEO bulk
2229	SAB	0.73 >More info	-0.27 >More info	COL		seedling	Original data
2230	PAHs stress	0.73 >More info	-0.27 >More info	exp control	phenanthrene	whole plants	Original data	GEO bulk
2231	hst5	0.73 >More info	-0.28 >More info	Col-0			Original data	GEO bulk
2232	ein2-1 untreated	0.73 >More info	-0.28 >More info	WT untreated	untreated		Original data	GEO bulk
2233	nNOS-control	0.73 >More info	-0.28 >More info	WT-control		leaf	Original data
2234	pil5 dark	0.73 >More info	-0.28 >More info	Col-0 dark			Original data	GEO bulk
2235	WT +elf18 10h	0.73 >More info	-0.28 >More info	WT untreated	elf18		Original data	GEO bulk
2236	Leaf GLU1-KO	0.73 >More info	-0.28 >More info	Leaf Col(0)		rosette leaves	Original data	GEO bulk
2237	myb triple mutant 8h-pollinated ms1	0.73 >More info	-0.28 >More info	WT 8h-pollinated		pistil	Original data	GEO bulk
2238	UV Stress 24 h (root)	0.73 >More info	-0.28 >More info	Stress mock 24 h (root)			Original data	Stress treatments
2239	35S:RPS4 rrs1-11 24h	0.73 >More info	-0.28 >More info	35S:RPS4 24h		leaves	Original data
2240	IRP1-OE-Fe--shoot	0.73 >More info	-0.28 >More info	COL-0-Fe--shoot		shoot	Original data
2241	QC pSCR 8h BL	0.73 >More info	-0.28 >More info	QC pSCR 0h BL	brassinosteroid	root	Original data
2242	+GA-180mins	0.73 >More info	-0.28 >More info	-180mins		whole plant	Original data	GEO bulk
2243	Sha-30min IAA	0.73 >More info	-0.28 >More info	Sha-0h IAA		whole plant	Original data	GEO bulk
2244	lht1 PstDC3000 48h	0.73 >More info	-0.28 >More info	PstDC3000 48h	48hr	leaf	Original data	GEO bulk
2245	Col light-light EtOH	0.73 >More info	-0.28 >More info	Col light-light Mock	2.5% ethanol		Original data	GEO bulk
2246	eto1-4 +303	0.73 >More info	-0.28 >More info	eto1-4		whole seedling	Original data	GEO bulk
2247	pmr4-1 powdery mildew	0.73 >More info	-0.28 >More info	WT powdery mildew	uninoculated		Original data	GEO bulk
2248	rts1-5	0.73 >More info	-0.28 >More info	null-mutant		whole plant	Original data	GEO bulk
2249	Laer pretreat JA Flg22 1h	0.73 >More info	-0.29 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2250	camta3-2	0.73 >More info	-0.29 >More info	WT			Original data	GEO bulk
2251	irradiated leaf (cmt 1d)	0.73 >More info	-0.29 >More info	control leaf (cmt 1d)		rosette leaf only	Original data	GEO bulk
2252	35SAvr	0.73 >More info	-0.29 >More info	Ecotype Col			Original data	GEO bulk
2253	miR393 flg22 1h	0.73 >More info	-0.29 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2254	1h light (+Lincomycin)	0.73 >More info	-0.29 >More info	1h light (-Lincomycin)		seedlings	Original data	GEO bulk
2255	cngc1-3	0.73 >More info	-0.29 >More info	Col-0		root	Original data	GEO bulk
2256	Mutant arf19-1	0.73 >More info	-0.29 >More info	Col			Original data	GEO bulk
2257	phloem sieve cells and companion cells	0.73 >More info	-0.29 >More info	Control for tissue data		phloem	Original data	GEO bulk
2258	ABA 0.5 h	0.73 >More info	-0.29 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
2259	35S-MIF1 light grown	0.73 >More info	-0.29 >More info	Light-grown WT control			Original data	GEO bulk
2260	lht1 untreated	0.73 >More info	-0.29 >More info	WT untreated	untreated	leaf	Original data	GEO bulk
2261	DFPM	0.73 >More info	-0.29 >More info	control			Original data	GEO bulk
2262	phyB mutant 16C 4hrs	0.73 >More info	-0.29 >More info	16C 4hs		whole plant excluding roots	Original data	GEO bulk
2263	agb1 -ABA LF	0.73 >More info	-0.29 >More info	Col-0 -ABA LF		Leaves of five week-old plants	Original data	GEO bulk
2264	Seedling-control POLYSOMESmRNA	0.73 >More info	-0.29 >More info	Seedling-control TOTALmRNA		seedling	Original data
2265	+GA-60mins	0.73 >More info	-0.29 >More info	-60mins		whole plant	Original data	GEO bulk
2266	AtMYB30-ox 90-105 min Xanthomonas	0.73 >More info	-0.29 >More info	WT 90-105 min Xanthomonas			Original data	GEO bulk
2267	Hydrogen Peroxide 500 uM	0.73 >More info	-0.29 >More info	Control RB and PER	Hydrogen Peroxide		Original data
2268	sta1	0.73 >More info	-0.30 >More info	WT			Original data	GEO bulk
2269	aba3-1	0.73 >More info	-0.30 >More info	wt			Original data	GEO bulk
2270	total mRNA eif3k	0.73 >More info	-0.30 >More info	total mRNA WT		aerial part	Original data	GEO bulk
2271	Col whole leaf 7dpi	0.73 >More info	-0.30 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
2272	hrcC	0.73 >More info	-0.30 >More info	MgCl2	5x10^7 cfu/ml DC3000 hrcC mutant		Original data	GEO bulk
2273	msh1 recA3 heat shock	0.73 >More info	-0.30 >More info	WT heat shock		above-ground parts	Original data	GEO bulk
2274	IPT8 induced 24h	0.73 >More info	-0.30 >More info	Control 24h	24 hours	primary root tip (5 mm)	Original data	GEO bulk
2275	S15-118	0.73 >More info	-0.30 >More info	wt			Original data	GEO bulk
2276	8h-DC3000 hrpA	0.73 >More info	-0.30 >More info	8h-DC3000		leaves	Original data	GEO bulk
2277	C58 35dpi	0.73 >More info	-0.30 >More info	Reference 35dpi		wounded inflorescence stalk segments	Original data	GEO bulk
2278	IMI 4mM	0.73 >More info	-0.30 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
2279	wt systemic wounding	0.73 >More info	-0.30 >More info	wt control		leaves	Original data	GEO bulk
2280	Laer pretreat GA+JA Flg22 0h	0.73 >More info	-0.31 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2281	gacA	0.73 >More info	-0.31 >More info	PA14		seedlings	Original data	GEO bulk
2282	SHR-GR Time 1H Dex	0.73 >More info	-0.31 >More info	SHR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
2283	pericycle control	0.73 >More info	-0.31 >More info	Control for tissue data	mock	pericycle	Original data	GEO bulk
2284	BI-1-30min IAA	0.73 >More info	-0.31 >More info	BI-1-0h IAA		whole plant	Original data	GEO bulk
2285	mil4 BTH	0.73 >More info	-0.31 >More info	Col BTH		rosettes	Original data	GEO bulk
2286	Polysomal RNA 35S:AtCSP1-FH1 cold	0.73 >More info	-0.31 >More info	Polysomal RNA csp1 cold	12h cold (4C)	rosettes	Original data	GEO bulk
2287	3x(m)	0.73 >More info	-0.31 >More info	2x		two week old seedlings	Original data
2288	NaCl scm	0.73 >More info	-0.31 >More info	NaCl Col			Original data	GEO bulk
2289	Rsch 3d	0.73 >More info	-0.31 >More info	Rsch CA		Leaves	Original data
2290	WT-NOCO2 INFECTED	0.73 >More info	-0.31 >More info	WT-MOCK			Original data	GEO bulk
2291	bio4-1 mutant leaves	0.73 >More info	-0.31 >More info	WT leaves		leaves	Original data	GEO bulk
2292	LEAFY-GR DEX	0.73 >More info	-0.31 >More info	Mock	Dexamethasone	seedlings	Original data	GEO bulk
2293	AgNO3 3 h	0.73 >More info	-0.31 >More info	Mock 3 h			Original data	Effect of ethylene inhibitors on seedlings
2294	C24-30min IAA	0.73 >More info	-0.31 >More info	C24-0h IAA		whole plant	Original data	GEO bulk
2295	WT 6H Cold	0.73 >More info	-0.31 >More info	WT control			Original data	GEO bulk
2296	ein2-1 +elf18 2h	0.73 >More info	-0.31 >More info	WT +elf18 2h	elf18		Original data	GEO bulk
2297	GSH	0.73 >More info	-0.31 >More info	control	GSH treated	seedlings	Original data	GEO bulk
2298	AFB1 flg22 1h	0.73 >More info	-0.31 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2299	Dry pre-dawn	0.73 >More info	-0.31 >More info	Wet pre-dawn	water-limited	whole rosette	Original data	GEO bulk
2300	Bur-0-30min IAA	0.73 >More info	-0.31 >More info	Bur-0h IAA		whole plant	Original data	GEO bulk
2301	per1 in control medium	0.73 >More info	-0.32 >More info	Col in control medium		root	Original data	GEO bulk
2302	gis5 seedlings	0.73 >More info	-0.32 >More info	WT seedlings		Whole seedlings (leaves + roots)	Original data
2303	aerial organ callus inducing medium 12 h	0.73 >More info	-0.32 >More info	aerial organ callus inducing medium 0 h	12 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
2304	upb1-1 elongation zone	0.73 >More info	-0.32 >More info	Col-0 elongation zone		Seedling root elongation zone	Original data	GEO bulk
2305	Col-0 +ABA LF	0.73 >More info	-0.32 >More info	Col-0 -ABA LF		Leaves of five week-old plants	Original data	GEO bulk
2306	differentiating xylem	0.73 >More info	-0.32 >More info	Control for tissue data		xylem	Original data	GEO bulk
2307	hy5 low light	0.73 >More info	-0.32 >More info	Col-O low light			Original data	GEO bulk
2308	shoot hypoxia pCER5	0.73 >More info	-0.32 >More info	shoot hypoxia total			Original data	GEO bulk
2309	cpr5npr1	0.73 >More info	-0.32 >More info	WT(COL)			Original data	GEO bulk
2310	CCA14 dark late	0.73 >More info	-0.32 >More info	Col dark late			Original data	GEO bulk
2311	Mutant hy5	0.73 >More info	-0.32 >More info	Col-0			Original data	GEO bulk
2312	Mutant hy5 (High Light)	0.73 >More info	-0.32 >More info	Col-0 (High Light)			Original data	GEO bulk
2313	erf104-ko Flg22 4h	0.73 >More info	-0.32 >More info	erf104-ko H2O 4h			Original data	GEO bulk
2314	WT flg22 1h	0.73 >More info	-0.32 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2315	hy5 high light	0.73 >More info	-0.32 >More info	Col-O high light			Original data	GEO bulk
2316	F1 whole seedlings root	0.73 >More info	-0.32 >More info	Col whole seedlings root		Seedlings	Original data	GEO bulk
2317	intact root control	0.73 >More info	-0.32 >More info	Control for tissue data	mock	whole root	Original data	GEO bulk
2318	Sha-1h IAA	0.73 >More info	-0.32 >More info	Sha-0h IAA		whole plant	Original data	GEO bulk
2319	scm	0.73 >More info	-0.32 >More info	Col			Original data	GEO bulk
2320	WT+chitooctaose	0.73 >More info	-0.32 >More info	WT+water	chitooctaose	seedlings	Original data	GEO bulk
2321	35S:PCO1 hypoxia	0.73 >More info	-0.32 >More info	WT hypoxia		whole rosette	Original data
2322	del1-1 mutant 5d uninfected	0.73 >More info	-0.33 >More info	Col-0 5d uininfected		mature fully expanded leaves	Original data	GEO bulk
2323	gpa1 +ABA LF	0.73 >More info	-0.33 >More info	Col-0 +ABA LF		Leaves of five week-old plants	Original data	GEO bulk
2324	cortex	0.73 >More info	-0.33 >More info	Control for tissue data		cortex	Original data	GEO bulk
2325	E.orontii Infection 6 h	0.73 >More info	-0.33 >More info	Uninfection 6 h			Original data	Elicitor treatments
2326	Col-0 Flg22 4h	0.73 >More info	-0.33 >More info	Col-0 H2O 4h			Original data	GEO bulk
2327	12h-DC3000 avrRpm1	0.73 >More info	-0.33 >More info	12h-DC3000		leaves	Original data	GEO bulk
2328	Stem+10 mg/g NPA	0.73 >More info	-0.33 >More info	Stem (mock control)	NPA treated stem	stem	Original data	GEO bulk
2329	shoot control pCER5	0.73 >More info	-0.33 >More info	shoot control total			Original data	GEO bulk
2330	dor drought	0.73 >More info	-0.33 >More info	WT drought			Original data	GEO bulk
2331	ulp1c ulp1d +Pto	0.73 >More info	-0.33 >More info	ulp1c ulp1d mock			Original data	GEO bulk
2332	Col laser microdissected 5 dpi	0.73 >More info	-0.33 >More info	Col laser microdissected 5d UI		LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
2333	Laer treat paclobutrazol (PAC)	0.73 >More info	-0.33 >More info	Laer Control		leaf discs	Original data	GEO bulk
2334	opr3 JA 2 h	0.73 >More info	-0.33 >More info	opr3 0 h			Original data	GEO bulk
2335	ABA DFPM	0.73 >More info	-0.33 >More info	control			Original data	GEO bulk
2336	Shoot -K	0.73 >More info	-0.33 >More info	Control-shoot			Original data	GEO bulk
2337	K starvation (shoot)	0.73 >More info	-0.33 >More info	Ws (shoot)			Original data	GEO bulk
2338	ABA control	0.73 >More info	-0.34 >More info	No ABA control			Original data	GEO bulk
2339	max3GR24 (1 uM)	0.73 >More info	-0.34 >More info	max3 seedlings DMSO (mock)		whole seedlings	Original data	GEO bulk
2340	Laer pretreat GA+JA Flg22 1h	0.73 >More info	-0.34 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2341	WT NAA/flg 2h	0.73 >More info	-0.34 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2342	ein2-1 +elf18 10h	0.73 >More info	-0.34 >More info	WT +elf18 10h	elf18		Original data	GEO bulk
2343	NJ15	0.73 >More info	-0.34 >More info	mock	sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates	Seedlings	Original data
2344	HSP90 Reduced RNAi-A3	0.73 >More info	-0.34 >More info	HSP90 Reduced Col-0 CS60000		All aerial tissue	Original data	GEO bulk
2345	epidermis control	0.73 >More info	-0.34 >More info	Control for tissue data	mock	epidermis	Original data	GEO bulk
2346	growing pollen tubes	0.73 >More info	-0.34 >More info	hydrated pollen grains			Original data	GEO bulk
2347	Col-0-30min IAA	0.73 >More info	-0.34 >More info	Col-0-0h IAA		whole plant	Original data	GEO bulk
2348	cpr5npr1svi1	0.73 >More info	-0.34 >More info	WT(COL)			Original data	GEO bulk
2349	GA3 3 h (ga1)	0.73 >More info	-0.34 >More info	Mock 3 h (ga1)			Original data	Basic hormone treatment of seedlings
2350	aerial organ callus inducing medium 24h	0.73 >More info	-0.34 >More info	aerial organ callus inducing medium 0 h	24 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
2351	elf3-7-23ºC	0.73 >More info	-0.34 >More info	WT-23ºC			Original data	GEO bulk
2352	Col-0-avrB-6h	0.73 >More info	-0.34 >More info	Col-0-untreated-control	avrB	leaf tissue	Original data	GEO bulk
2353	Lipopolysaccaride4 h (leaf)	0.73 >More info	-0.34 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
2354	IRP1-OE-Fe--root	0.73 >More info	-0.35 >More info	COL-0-Fe--root		root	Original data
2355	polysome mRNA eif3k	0.73 >More info	-0.35 >More info	polysome mRNA WT		aerial part	Original data	GEO bulk
2356	WT-Dry	0.73 >More info	-0.35 >More info	WT-CK	dehydration treatment 1h		Original data
2357	flu dark 8hours/30 minute light	0.73 >More info	-0.35 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
2358	W(Liq) L-AOPP+IPyA	0.73 >More info	-0.35 >More info	W(Liq) Mock		whole plant	Original data	GEO bulk
2359	HopZ1a treated	0.73 >More info	-0.35 >More info	col			Original data	GEO bulk
2360	estradiol induced LEC1	0.73 >More info	-0.36 >More info	control			Original data	GEO bulk
2361	bbx24 in Simulated Shade	0.73 >More info	-0.36 >More info	WT in simulated shade	shade	seedling	Original data
2362	Norflurazon	0.73 >More info	-0.36 >More info	Col-0			Original data	GEO bulk
2363	Laer pretreat JA Flg22 0h	0.73 >More info	-0.36 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2364	Estradiol4 days	0.73 >More info	-0.36 >More info	Col			Original data	GEO bulk
2365	IRP1-OE-Ctrl--root	0.73 >More info	-0.36 >More info	COL-0-Ctrl--root		root	Original data
2366	seedlings-week-old RECA1-overexpressing transgenic	0.73 >More info	-0.36 >More info	seedlings-week-old Col-0		seedlings	Original data
2367	aba2 1% sucrose 12-day-old	0.73 >More info	-0.36 >More info	Col-7 1% sucrose 12-day-old			Original data	GEO bulk
2368	Differentiation 24h	0.73 >More info	-0.36 >More info	Differentiation 0h		leaves	Original data
2369	cngc19	0.73 >More info	-0.36 >More info	Col-0		root	Original data	GEO bulk
2370	Wounding Stress3 h (shoot)	0.73 >More info	-0.36 >More info	Stress mock 3 h (shoot)			Original data	Stress treatments
2371	Norflurazon	0.73 >More info	-0.36 >More info	WT-Contrl	a herbicide (Norflurazon)	seedling	Original data	GEO bulk
2372	mature endodermis glcal	0.73 >More info	-0.37 >More info	Control for tissue data		endodermis	Original data	GEO bulk
2373	CsUBC13-OE -Fe	0.73 >More info	-0.37 >More info	Col -Fe		root	Original data	GEO bulk
2374	flu	0.73 >More info	-0.37 >More info	WT Col			Original data	GEO bulk
2375	IAA 1 h	0.73 >More info	-0.37 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
2376	WT NAA/flg 1h	0.73 >More info	-0.37 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2377	2 h EST	0.73 >More info	-0.37 >More info	mock	2 h EST	seedling	Original data	GEO bulk
2378	Cor 10h	0.73 >More info	-0.37 >More info	Mock 10h	Cor		Original data	GEO bulk
2379	MYB46-GR DEX	0.73 >More info	-0.37 >More info	MYB46-GR mock		Young rosette leaves (5-7th)	Original data	GEO bulk
2380	ataf1-1 mutant Col-0 Bgh inoculated	0.73 >More info	-0.37 >More info	ataf1-1 mutant Col-0 Un-inoculated			Original data	GEO bulk
2381	SLWF infested	0.73 >More info	-0.37 >More info	SLWF uninfested		rosette tissue	Original data	GEO bulk
2382	CLO 4mM	0.73 >More info	-0.38 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
2383	root cap pGL2(root cap pGL2BRI1) 8h BL	0.73 >More info	-0.38 >More info	root cap pGL2(root cap pGL2BRI1) 0h BL	brassinosteroid	root	Original data
2384	root hair	0.73 >More info	-0.38 >More info	Control for tissue data		root hairs	Original data	GEO bulk
2385	WT 2-4h Xanthomonas	0.73 >More info	-0.38 >More info	WT T0			Original data	GEO bulk
2386	NAA -AA	0.73 >More info	-0.38 >More info	B5 -AA	B5 media supplemented with 4.5 µM NAA and untreated		Original data
2387	Red Light 4 h	0.73 >More info	-0.38 >More info	White Light 4 h			Original data	Light treatments
2388	-Sulfate 2 h	0.73 >More info	-0.38 >More info	Mock 2 h (1500uM sulfate)			Original data	Response to sulfate limitation
2389	Cs root	0.73 >More info	-0.38 >More info	control root			Original data	GEO bulk
2390	IAA Treated	0.73 >More info	-0.38 >More info	Negative Control			Original data	GEO bulk
2391	amiR-tor induced 3d	0.73 >More info	-0.38 >More info	amiR-tor 3d C	3 days estradiol-treated	seedlings	Original data	GEO bulk
2392	15m.KCl	0.73 >More info	-0.38 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
2393	flu over-tAPX	0.73 >More info	-0.38 >More info	WT Col			Original data	GEO bulk
2394	pab polysome	0.73 >More info	-0.39 >More info	WT polysome		seedling shoot/aerial seedling	Original data
2395	mdh	0.73 >More info	-0.39 >More info	Col			Original data	GEO bulk
2396	E.coli TUV86 2 fliC 7h	0.73 >More info	-0.39 >More info	Mock 7h	E.coli TUV86 2 fliC		Original data	GEO bulk
2397	Laer Flg22+GA 2h	0.73 >More info	-0.39 >More info	Laer Control		leaf discs	Original data	GEO bulk
2398	10mM sucrose	0.73 >More info	-0.39 >More info	control		Whole seedling	Original data	GEO bulk
2399	bZIP1ko mutant N+Light-	0.73 >More info	-0.39 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
2400	A. halleri highZn-root	0.73 >More info	-0.39 >More info	A. petraea highZn-root			Original data	GEO bulk
2401	sid2-2 9 hpi A. brassicicola	0.73 >More info	-0.39 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
2402	WT Col-0 Bgh inoculated	0.73 >More info	-0.39 >More info	WT Col-0 Un-inoculated			Original data	GEO bulk
2403	Col-Luc WT 3h antimycin A	0.73 >More info	-0.39 >More info	Col-Luc WT mock	50 µM antimycin A for 3 hours	whole green tissue	Original data	GEO bulk
2404	AvrRpm1 2 h (leaf)	0.73 >More info	-0.40 >More info	Mock 2 h (leaf)			Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
2405	msh1 albino	0.73 >More info	-0.40 >More info	WT		aerial part	Original data	GEO bulk
2406	opr3 OPDA 2 h	0.73 >More info	-0.40 >More info	opr3 0 h			Original data	GEO bulk
2407	miR393 flg22 2h	0.73 >More info	-0.40 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2408	mpk6-ko Flg22 4h	0.73 >More info	-0.40 >More info	mpk6-ko H2O 4h			Original data	GEO bulk
2409	Laer pretreat GA+JA Flg22 2h	0.73 >More info	-0.40 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
2410	DC3000 hrcC 2 h (leaf)	0.73 >More info	-0.40 >More info	Mock 2 h (leaf)			Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
2411	B.cinerea 18 h infection	0.73 >More info	-0.40 >More info	Mock 18 h			Original data	Botrytis cinerea infection
2412	Botrytis cinerea 18h	0.73 >More info	-0.40 >More info	control 18h			Original data	GEO bulk
2413	Mutant iaa5_6_19(IAA)	0.73 >More info	-0.41 >More info	Col (IAA)			Original data	GEO bulk
2414	Rsch 1d	0.73 >More info	-0.41 >More info	Rsch CA		Leaves	Original data
2415	10min Reillumination Total RNA	0.73 >More info	-0.41 >More info	1h Dark Total RNA	1 h darkness plus 10 min reillumination	whole seedlings	Original data	GEO bulk
2416	col-5 DC3000-avrRpm 4h	0.73 >More info	-0.41 >More info	col-5 MgCl2 4h		Whole leaf	Original data	GEO bulk
2417	Elevated CO2 expanding leaf	0.73 >More info	-0.41 >More info	Ambient CO2 expanding leaf		expanding leaf	Original data
2418	Differentiation 48h	0.73 >More info	-0.41 >More info	Differentiation 0h		leaves	Original data
2419	35S::ERF104 Flg22 4h	0.73 >More info	-0.41 >More info	35S::ERF104 H2O 4h			Original data	GEO bulk
2420	Wt-BA-sample	0.73 >More info	-0.41 >More info	Wt-dmso-sample		seedling	Original data
2421	Laer Flg22 1h	0.73 >More info	-0.42 >More info	Laer Control		leaf discs	Original data	GEO bulk
2422	lateral root cap-columella pBRN2 3h BL	0.73 >More info	-0.42 >More info	lateral root cap-columella pBRN2 0h BL	brassinosteroid	root	Original data
2423	Differentiation 12h	0.73 >More info	-0.42 >More info	Differentiation 0h		leaves	Original data
2424	vte2-1 3d vernalization	0.73 >More info	-0.42 >More info	WT 3d vernalization			Original data	GEO bulk
2425	WT-16ºC	0.73 >More info	-0.42 >More info	WT-23ºC			Original data	GEO bulk
2426	Nuclear GSH1	0.73 >More info	-0.42 >More info	Cytoplasmic GSH1	Control		Original data	GEO bulk
2427	aerial organ callus inducing medium 48 h	0.73 >More info	-0.42 >More info	aerial organ callus inducing medium 0 h	48 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
2428	npr1	0.73 >More info	-0.43 >More info	WT(COL)			Original data	GEO bulk
2429	xyl-grown cell culture- 1h 1mM Glc	0.73 >More info	-0.43 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
2430	rdr1-1	0.73 >More info	-0.43 >More info	Col-0			Original data	GEO bulk
2431	seedlings protease IV	0.73 >More info	-0.43 >More info	seedlings nontreated control		whole seedling	Original data
2432	WT 1wk -P	0.73 >More info	-0.43 >More info	WT 1wk +P	No phosphate medium	seedlings without roots	Original data	GEO bulk
2433	Differentiation 36h	0.73 >More info	-0.43 >More info	Differentiation 0h		leaves	Original data
2434	eif3h polysome	0.73 >More info	-0.43 >More info	WT polysome			Original data	GEO bulk
2435	IPT8 mutant tZ 24h	0.73 >More info	-0.43 >More info	Control 24h	24 hours	primary root tip (5 mm)	Original data	GEO bulk
2436	eto1-4 + AVG	0.73 >More info	-0.44 >More info	eto1-4		whole seedling	Original data	GEO bulk
2437	Laer Flg22+GA 1h	0.73 >More info	-0.44 >More info	Laer Control		leaf discs	Original data	GEO bulk
2438	Laer Flg22 2h	0.73 >More info	-0.44 >More info	Laer Control		leaf discs	Original data	GEO bulk
2439	Phaseolicola 2 h (leaf)	0.73 >More info	-0.45 >More info	Mock 2 h (leaf)			Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
2440	DC3000 7h	0.73 >More info	-0.45 >More info	Mock 7h	DC3000		Original data	GEO bulk
2441	Cs shoot	0.73 >More info	-0.45 >More info	control shoot			Original data	GEO bulk
2442	Rsch 8h	0.73 >More info	-0.45 >More info	Rsch CA		Leaves	Original data
2443	Flagellin 4 h (leaf)	0.73 >More info	-0.45 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
2444	GST NPP1 4 h (leaf)	0.73 >More info	-0.46 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
2445	high R/FR SA	0.73 >More info	-0.46 >More info	high R/FR	high R/FR (control) SA spray		Original data	GEO bulk
2446	20m.KCl	0.73 >More info	-0.48 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
2447	WT in -N	0.73 >More info	-0.48 >More info	WT in FN	nitrogen depletion	whole seedling	Original data	GEO bulk
2448	nas4x leaves + Fe	0.73 >More info	-0.48 >More info	WT leaves + Fe		Leaves	Original data	GEO bulk
2449	pab nonpolysome	0.73 >More info	-0.49 >More info	WT nonpolysome		seedling shoot/aerial seedling	Original data
2450	dde2-2 9 hpi A. brassicicola	0.73 >More info	-0.50 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
2451	Col-0 low oxygen	0.73 >More info	-0.50 >More info	Col-0			Original data	GEO bulk
2452	QC pSCR 3h BL	0.73 >More info	-0.50 >More info	QC pSCR 0h BL	brassinosteroid	root	Original data
2453	E.coli 0157 H7 7h	0.73 >More info	-0.51 >More info	Mock 7h	E.coli 0157 H7		Original data	GEO bulk
2454	SCR-GR Time 12H Dex	0.73 >More info	-0.51 >More info	SCR-GR Time 0H Dex	Dex media for 12 hours		Original data	GEO bulk
2455	bam7 untreated	0.73 >More info	-0.51 >More info	WT untreated	none	shoot	Original data
2456	Col ozone 3h	0.73 >More info	-0.51 >More info	Col clean-air 3h	ozone		Original data	GEO bulk
2457	SA 4mM	0.73 >More info	-0.51 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
2458	3.5h KNO3 Whole root	0.73 >More info	-0.52 >More info	3.5h KCl control Whole root		Whole root	Original data	GEO bulk
2459	Brassinolide 3 h (det2)	0.73 >More info	-0.52 >More info	Mock 3 h (det2)			Original data	Basic hormone treatment of seedlings
2460	Fei-0-30min IAA	0.73 >More info	-0.52 >More info	Fei-0-0h IAA		whole plant	Original data	GEO bulk
2461	35SpBVR3	0.73 >More info	-0.52 >More info	WT			Original data	GEO bulk
2462	ein2-1 9 hpi A. brassicicola	0.73 >More info	-0.53 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
2463	GST 4 h (leaf)	0.73 >More info	-0.53 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
2464	35:SUB1C	0.73 >More info	-0.54 >More info	WT		whole seedling	Original data	GEO bulk
2465	aerial organ callus inducing medium 96 h	0.73 >More info	-0.54 >More info	aerial organ callus inducing medium 0 h	96 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
2466	Red/FR Light 4 h	0.73 >More info	-0.55 >More info	FarRed Light 4 h			Original data	Light treatments
2467	IAA 0.5 h	0.73 >More info	-0.55 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
2468	col-5 hrpA 12h	0.73 >More info	-0.55 >More info	col-5 MgCl2 12h		Whole leaf	Original data	GEO bulk
2469	phyAphyB Dark	0.73 >More info	-0.55 >More info	phyB Dark			Original data	GEO bulk
2470	2hr continuous KNO3 ECR cell	0.73 >More info	-0.56 >More info	2hr KCl control ECR cell		Epidermis&Cortex root cells	Original data	GEO bulk
2471	Col-0 9 hpi A. brassicicola	0.73 >More info	-0.56 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
2472	T101D 10mM NH4NO3	0.73 >More info	-0.58 >More info	col 10mM NH4NO3		Root	Original data
2473	col-5 DC3000 12h	0.73 >More info	-0.58 >More info	col-5 MgCl2 12h		Whole leaf	Original data	GEO bulk
2474	cat2-2; 8h switch to ambient CO2 concentrations;	0.73 >More info	-0.60 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
2475	9m.KNO3	0.73 >More info	-0.60 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
2476	FarRed Light 45min	0.73 >More info	-0.60 >More info	White Light 45min			Original data	Light treatments
2477	phr1 phl1 Root-Pi	0.73 >More info	-0.61 >More info	WT Shoot+Pi		roots	Original data	GEO bulk
2478	35S:VND7-VP16-GR+CHX	0.73 >More info	-0.62 >More info	harboring empty vector+CHX	10mM cycloheximide (CHX) 6hrs	whole seedlings	Original data	GEO bulk
2479	CabpBVR2	0.73 >More info	-0.63 >More info	WT			Original data	GEO bulk
2480	GO5; 8h switch to ambient CO2 concentrations;	0.73 >More info	-0.63 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
2481	Seedling KUA1-IOX est	0.73 >More info	-0.66 >More info	Seedling KUA1-IOX mock			Original data
2482	Brassinolide 1 h (det2)	0.73 >More info	-0.66 >More info	Mock 1 h (det2)			Original data	Basic hormone treatment of seedlings
2483	Red Light 45min	0.73 >More info	-0.79 >More info	White Light 45min			Original data	Light treatments
2484	Red/FR Light45min	0.73 >More info	-0.69 >More info	FarRed Light 45min			Original data	Light treatments