4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Nicotinamide-49hr
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Nicotinamide-49hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
Nicotinamide-49hr		 Correlation to
Nicotinamide-49hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Nicotinamide-49hr 1.00 >More info 1.00 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
2 Nicotinamide-73hr 0.91 >More info 0.93 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
3 Nicotinamide-53hr 0.87 >More info 0.91 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
4 Nicotinamide-69hr 0.86 >More info 0.90 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
5 Nicotinamide-77hr 0.82 >More info 0.90 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
6 Nicotinamide-93hr 0.84 >More info 0.88 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
7 Nicotinamide-81hr 0.77 >More info 0.88 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
8 Nicotinamide-57hr 0.75 >More info 0.90 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
9 Nicotinamide-89hr 0.77 >More info 0.86 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
10 Nicotinamide-65hr 0.81 >More info 0.82 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
11 toc1-1-77hr 0.75 >More info 0.82 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
12 Nicotinamide-85hr 0.69 >More info 0.84 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
13 toc1-1-53hr 0.71 >More info 0.82 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
14 Nicotinamide-61hr 0.70 >More info 0.80 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
15 Shoot submergence 24h 0.71 >More info 0.69 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 Col-0 C2H4 24h 0.72 >More info 0.67 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
17 Shoot dark control 7h 0.68 >More info 0.69 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
18 Col-0 under 4 days salt 0.69 >More info 0.67 >More info Col-0 under control 4 days salt treatment rosette Original data
19 Shoot dark control 24h 0.63 >More info 0.67 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
20 low CO2 + light 0.63 >More info 0.67 >More info normal CO2 + light Original data GEO bulk
21 4d red light grown hmr-5 seedlings 0.60 >More info 0.68 >More info 4d red light grown WT(Col-0) seedlings Original data
22 spch 0.59 >More info 0.69 >More info Col-0 WT whole seedling Original data GEO bulk
23 gun5 norflurazon 0.59 >More info 0.66 >More info gun5 control Original data GEO bulk
24 UV Stress 24 h (shoot) 0.65 >More info 0.60 >More info Stress mock 24 h (shoot) Original data Stress treatments
25 tt4 0.65 >More info 0.60 >More info Col-0 aerial part Original data
26 toc1-1-73hr 0.56 >More info 0.68 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
27 aerial organ callus inducing medium 12 h 0.65 >More info 0.58 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
28 low CO2 + dark 0.61 >More info 0.62 >More info normal CO2 + light Original data GEO bulk
29 IMI 4mM 0.53 >More info 0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
30 mkk1/mkk2 24h BTH rep 0.55 >More info 0.67 >More info Col-0 24h BTH rep Original data GEO bulk
31 4h decapitation -0.52 >More info -0.70 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
32 pad4-PsmES4326-24hpi -0.60 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
33 cpr5scv1 0.64 >More info 0.56 >More info WT(COL) Original data GEO bulk
34 Dark 6h ivd 0.60 >More info 0.60 >More info 0h ivd Original data
35 AgNO3 3 h 0.51 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
36 Laer treat paclobutrazol (PAC) 0.58 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
37 Dark 3day ivd 0.63 >More info 0.56 >More info 0h ivd Original data
38 seedling 1.5h after HZE atm-1 0.59 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
39 detached inflorescences 24h 0.55 >More info 0.64 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
40 Root submergence 24h 0.56 >More info 0.63 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
41 Col whole leaf 5dpi 0.58 >More info 0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
42 WT cold 0.64 >More info 0.54 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
43 MYB12OX/tt4 0.65 >More info 0.53 >More info Col-0 aerial part Original data
44 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info 0.61 >More info seedlings-week-old Col-0 seedlings Original data
45 Root submergence 7h 0.57 >More info 0.61 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
46 Root dark control 7h 0.53 >More info 0.64 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
47 35S:RPS4 eds1-2 24h -0.59 >More info -0.58 >More info 35S:RPS4 24h leaves Original data
48 Root dark control 24h 0.52 >More info 0.65 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
49 Col0-PsmES4326-24hpi 0.56 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
50 Sulfometuron EC50 0.54 >More info 0.63 >More info Carrier Original data GEO bulk
51 ein2-1 +Pep2 2h -0.62 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
52 Pseudomonas 0.52 >More info 0.64 >More info Control pseudomonas treated whole seedling Original data GEO bulk
53 col-5 hrpA 12h 0.55 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
54 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
55 E.coli TUV86 2 fliC 7h 0.52 >More info 0.63 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
56 CAX1/CAX3 mutant 0.62 >More info 0.53 >More info Col whole plant Original data GEO bulk
57 hrpA 7h 0.50 >More info 0.65 >More info Mock 7h hrpA Original data GEO bulk
58 CMP 24hr 0.53 >More info 0.62 >More info Acetone 24hr root Original data GEO bulk
59 GST 4 h (leaf) 0.51 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
60 1 h Light Total RNA -0.46 >More info -0.69 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
61 dde2-2 9 hpi A. brassicicola 0.46 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
62 toc1-1-57hr 0.56 >More info 0.58 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
63 M6PR transgenic leaf 0mM NaCl 0.50 >More info 0.64 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
64 CMP 4hr 0.48 >More info 0.66 >More info Acetone 4hr root Original data GEO bulk
65 rosette leaves fdh 0.46 >More info 0.67 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
66 camta1/2/3 warm 0.57 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
67 TNT-seedlings 0.37 >More info 0.76 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
68 Cor 10h 0.49 >More info 0.64 >More info Mock 10h Cor Original data GEO bulk
69 Col-0 SA 0.47 >More info 0.66 >More info Col-0 Original data GEO bulk
70 E.coli 0157 H7 7h 0.50 >More info 0.62 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
71 cpr5npr1 0.54 >More info 0.58 >More info WT(COL) Original data GEO bulk
72 pap1-D/tt4 0.60 >More info 0.52 >More info Col-0 aerial part Original data
73 Col-0-avrB-6h 0.48 >More info 0.64 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
74 35S::PI ap3-3 35S::AP-GR +DEX 0.37 >More info 0.75 >More info 0hr DEX Original data GEO bulk
75 WT 2-4h Xanthomonas 0.42 >More info 0.70 >More info WT T0 Original data GEO bulk
76 A. thaliana-A. lyrata hybrid -0.51 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
77 pepr1-1 Pepr2-3 +Pep2 2h -0.57 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
78 sfr6 control -0.64 >More info -0.47 >More info WT control All aerial tissue Original data GEO bulk
79 SA 4mM 0.50 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
80 GST NPP1 4 h (leaf) 0.47 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
81 pnp1-1 3h +P 0.49 >More info 0.62 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
82 gun4-1 0.48 >More info 0.63 >More info WT Col-0 seedling Original data GEO bulk
83 OsRLCK253 expressing -0.49 >More info -0.62 >More info WT seedlings Original data GEO bulk
84 Leafminer damaged seedlings 0.54 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
85 seedling 1.5h after HZE WT 0.57 >More info 0.53 >More info seedling day 1 unirradiated WT 1.5h Original data
86 col-5 DC3000 12h 0.55 >More info 0.55 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
87 Phytoprostane A1 4 h 0.49 >More info 0.61 >More info Col-0 Original data GEO bulk
88 Laer pretreat GA Flg22 1h 0.39 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 Col-0 9 hpi A. brassicicola 0.48 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
90 sex1-3 0.41 >More info 0.69 >More info Col-WT leaves Original data GEO bulk
91 M6PR transgenic 0mM NaCl 0.54 >More info 0.55 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
92 gai Control 0.56 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
93 CMV-WT 0.51 >More info 0.58 >More info Mock-At Aerial tissues Original data GEO bulk
94 Cold Stress 24 h (shoot) 0.60 >More info 0.49 >More info Stress mock 24 h (shoot) Original data Stress treatments
95 8hr-pH4.5 0.56 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
96 Dark 3day wt 0.55 >More info 0.53 >More info 0h wt Original data
97 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.55 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
98 Flagellin 4 h (leaf) 0.48 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
99 cngc4 0.49 >More info 0.59 >More info Ws-2 Seedlings Original data GEO bulk
100 WT +elf18 10h 0.53 >More info 0.54 >More info WT untreated elf18 Original data GEO bulk
101 aerial organ callus inducing medium 48 h 0.63 >More info 0.44 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
102 gun1-9 norflurazon 0.50 >More info 0.57 >More info gun1-9 control Original data GEO bulk
103 WT cold 24h 0.58 >More info 0.49 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
104 Uniconazole 12 h 0.50 >More info 0.57 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
105 toc1-1-49hr 0.59 >More info 0.47 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
106 efr-1 +elf18 10h -0.51 >More info -0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
107 eto1-4 0.48 >More info 0.58 >More info Col-0 whole seedling Original data GEO bulk
108 bio4-1 mutant leaves 0.40 >More info 0.66 >More info WT leaves leaves Original data GEO bulk
109 Fenclorim 4hr 0.45 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
110 1 h Light IP RNA -0.47 >More info -0.59 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
111 bak1-3 +Pep2 10h 0.46 >More info 0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
112 sicy-192 gun1-101 cotyledons 0.46 >More info 0.60 >More info WT cotyledons cotyledons Original data
113 Leafminer locally damaged thaliana seedlings 0.54 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
114 Col whole leaf 5 dpi 0.53 >More info 0.52 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
115 D2O 0.53 >More info 0.52 >More info H2O seedling Original data GEO bulk
116 aerial organ callus inducing medium 24h 0.59 >More info 0.46 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
117 Lipopolysaccaride4 h (leaf) 0.53 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
118 atmyc2 cop1 Seedling BL 0.52 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
119 Col(gl) leaf 0mM NaCl 0.46 >More info 0.59 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
120 Col(gl) 0mM NaCl 0.46 >More info 0.59 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
121 WT (Col) glucose -0.40 >More info -0.65 >More info WT (Col) glucose seedlings Original data GEO bulk
122 6h +Pi -0.48 >More info -0.57 >More info 6h -Pi root Original data GEO bulk
123 camta2/3 warm 0.56 >More info 0.48 >More info WT warm entire aerial part Original data GEO bulk
124 sfr3 cold 0.51 >More info 0.53 >More info WT cold All aerial tissue Original data GEO bulk
125 Dark 3day hml 0.53 >More info 0.51 >More info 0h hml Original data
126 gh3.5-1D 48 hpi 0.50 >More info 0.54 >More info Col-0 uninoculated Original data GEO bulk
127 Dark 2day hml 0.57 >More info 0.47 >More info 0h hml Original data
128 +1.6 mM Tween 20 1 h. 0.51 >More info 0.53 >More info +distilled water 1 h. Original data GEO bulk
129 WT cold 12 h 0.51 >More info 0.53 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
130 edr1 36 h powdery mildew 0.58 >More info 0.46 >More info Col-0 36 h powdery mildew Original data GEO bulk
131 atmospheric CO2 low Mg shoot 0.59 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
132 sfr2 control -0.67 >More info -0.37 >More info WT control All aerial tissue Original data GEO bulk
133 safener treated 0.48 >More info 0.56 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
134 hai1-2 low water potential 0.48 >More info 0.56 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
135 cpr5 0.49 >More info 0.55 >More info WT(COL) Original data GEO bulk
136 Primisulfuron EC50 0.49 >More info 0.55 >More info Carrier (primisulfuron) Original data GEO bulk
137 cpr5npr1svi1 0.54 >More info 0.49 >More info WT(COL) Original data GEO bulk
138 8h-DC3000 avrRpm1 0.50 >More info 0.53 >More info 8h-DC3000 leaves Original data GEO bulk
139 Col whole leaf 7dpi 0.46 >More info 0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
140 Te 1d 0.48 >More info 0.55 >More info Te CA Leaves Original data
141 Cocultivation 8 hrs root 0.47 >More info 0.56 >More info Mock cocultivation 8 hrs root Root Original data
142 Osmotic Stress 24 h (shoot) 0.53 >More info 0.49 >More info Stress mock 24 h (shoot) Original data Stress treatments
143 mil4 BTH 0.58 >More info 0.44 >More info Col BTH rosettes Original data GEO bulk
144 pepr1-1 Pepr2-3 +Pep2 10h -0.51 >More info -0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
145 Dark 2day wt 0.52 >More info 0.50 >More info 0h wt Original data
146 plant (tga2-5-6) 4h phytoprostane A1 0.46 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
147 flu over-tAPX 0.40 >More info 0.62 >More info WT Col Original data GEO bulk
148 dor drought 0.51 >More info 0.50 >More info WT drought Original data GEO bulk
149 35S:RPS4 eds1-2 8h -0.51 >More info -0.50 >More info 35S:RPS4 8h leaves Original data
150 aerial organ callus inducing medium 96 h 0.60 >More info 0.41 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
151 mkk1/mkk2 control rep 0.43 >More info 0.58 >More info Col-0 Time 0 rep Original data GEO bulk
152 til1-1 22C 0.39 >More info 0.62 >More info Col-0 22C Original data GEO bulk
153 SCR-GR Time 1H Dex 0.29 >More info 0.72 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
154 miR393 0h -0.43 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
155 HopZ1a treated ulp1c ulp1d 0.45 >More info 0.56 >More info col Original data GEO bulk
156 hrpA fliC 7h 0.41 >More info 0.60 >More info Mock 7h hrpA fliC Original data GEO bulk
157 scrm-D 0.51 >More info 0.49 >More info Col-0 WT whole seedling Original data GEO bulk
158 WT hypoxia 0.54 >More info 0.46 >More info WT normoxia whole rosette Original data
159 ced1 -0.53 >More info -0.47 >More info WT PEG 6hr seedlings Original data GEO bulk
160 5-Triiodobenzoic acid3 h 0.37 >More info 0.63 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
161 rosette leaves lcr 0.49 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
162 seedling 6h after HZE WT 0.49 >More info 0.51 >More info seedling day 1 unirradiated WT 6h Original data
163 Col-0 INA 6d 0.63 >More info 0.36 >More info Col-0 MOCK 6d Original data GEO bulk
164 cs26 long day 0.44 >More info 0.55 >More info Leaves-WT-LD leaf Original data GEO bulk
165 DFPM 0.39 >More info 0.60 >More info control Original data GEO bulk
166 msh1 stunt 0.44 >More info 0.55 >More info WT Col-0 above ground part of plant Original data GEO bulk
167 Triazolopyrimidine EC50 0.46 >More info 0.53 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
168 9 hr Hypoxia 1 hr recovery Total RNA 0.47 >More info 0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
169 WT-NOCO2 INFECTED 0.53 >More info 0.45 >More info WT-MOCK Original data GEO bulk
170 8 hr ammonium 0.51 >More info 0.47 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
171 RGA-GR-DEX 0.29 >More info 0.69 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
172 Col-0 norflurazon 0.43 >More info 0.55 >More info Col-0 control Original data GEO bulk
173 petiole in D 0.47 >More info 0.51 >More info petiole in WL petioles Original data GEO bulk
174 HopZ1a treated 0.42 >More info 0.56 >More info col Original data GEO bulk
175 pmr4-1 powdery mildew 0.44 >More info 0.54 >More info WT powdery mildew uninoculated Original data GEO bulk
176 GO5; 8h switch to ambient CO2 concentrations; 0.35 >More info 0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
177 aox1a(line) MLD stressed 0.47 >More info 0.51 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
178 wrky33 Bc inoculation 14h 0.55 >More info 0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
179 AvrRpt2 Col-0 6hpi 0.50 >More info 0.47 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
180 WT Bc inoculation 14h 0.52 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
181 shoot-10 μM DEX- 6 hr 0.50 >More info 0.47 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
182 Laer Flg22 2h 0.46 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
183 AFB1 0h 0.45 >More info 0.52 >More info Col 0h Leaf Original data GEO bulk
184 Roots Cd -0.38 >More info -0.59 >More info Roots control Cd Root Original data GEO bulk
185 UV 0.47 >More info 0.50 >More info WT aerial region Original data GEO bulk
186 msh1 albino 0.44 >More info 0.53 >More info WT aerial part Original data GEO bulk
187 ein2-1 +elf18 2h -0.46 >More info -0.51 >More info WT +elf18 2h elf18 Original data GEO bulk
188 root endodermis and quiescent center 40 mM NaCl 0.47 >More info 0.50 >More info root endodermis and quiescent center Original data GEO bulk
189 pmr5 pmr6 0.40 >More info 0.57 >More info Col-0 Original data GEO bulk
190 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.56 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
191 camta1/3 warm 0.60 >More info 0.36 >More info WT warm entire aerial part Original data GEO bulk
192 ein2-1 +elf18 10h -0.60 >More info -0.36 >More info WT +elf18 10h elf18 Original data GEO bulk
193 Cor hrpS 10h 0.50 >More info 0.46 >More info Mock 10h Cor hrpS Original data GEO bulk
194 Atss3 Light4 -0.39 >More info -0.57 >More info Atss3 Dark0.5 Original data GEO bulk
195 bZIP1ko mutant N+Light- 0.39 >More info 0.57 >More info WT-sib N+Light- whole plant Original data GEO bulk
196 sta1 0.42 >More info 0.54 >More info WT Original data GEO bulk
197 bHLH122 ox -0.31 >More info -0.65 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
198 shoots bhlh100/101 0uM Fe 0.40 >More info 0.55 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
199 WT AntimycinA 3h 0.40 >More info 0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
200 IRP1-OE-Fe--shoot 0.39 >More info 0.56 >More info COL-0-Fe--shoot shoot Original data
201 C24-3h IAA 0.57 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
202 Dark 1day ivd 0.45 >More info 0.50 >More info 0h ivd Original data
203 flu 0.38 >More info 0.57 >More info WT Col Original data GEO bulk
204 coi1-2 0.42 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
205 ORS1 induced 0.34 >More info 0.61 >More info mock-induced rosette leaves Original data GEO bulk
206 ABA SA 24h 0.34 >More info 0.61 >More info EtOH 24h 24hr Original data GEO bulk
207 Botrytis cinerea 48h 0.41 >More info 0.54 >More info control 48h Original data GEO bulk
208 Whole root - low pH 12H 0.38 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
209 xyl-grown cell culture- 1h 1mM Fru -0.26 >More info -0.68 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
210 CT101 ozone 0.52 >More info 0.42 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
211 mbd4 mutant thaliana 10-day-old seedling 0.57 >More info 0.37 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
212 12h-DC3000 avrRpm1 0.57 >More info 0.37 >More info 12h-DC3000 leaves Original data GEO bulk
213 ACC 3 h 0.42 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
214 plant (Col-0) 4h phytoprostane A1 0.42 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
215 pnp1-1 1wk -P 0.37 >More info 0.57 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
216 4C 24h(SOIL) 0.56 >More info 0.37 >More info 4C 0h(SOIL) Original data GEO bulk
217 SA 0.39 >More info 0.54 >More info WT mock Whole seedling Original data GEO bulk
218 root epidermis and lateral root cap pH4.6 0.39 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
219 del1-1 mutant 5d uninfected 0.38 >More info 0.55 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
220 cop1 Seedling BL 0.52 >More info 0.41 >More info WT Seedling BL Original data GEO bulk
221 ARR21C-ox 0.51 >More info 0.42 >More info Col-0 Original data ARR21C overexpression
222 Ws leaf 100mM NaCl 0.36 >More info 0.57 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
223 Ws 100mM NaCl 0.36 >More info 0.57 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
224 Seedling KUA1-IOX est 0.41 >More info 0.52 >More info Seedling KUA1-IOX mock Original data
225 C24 ozone 0.52 >More info 0.40 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
226 Chitosan 3h Treatment 0.40 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
227 Te ozone 0.50 >More info 0.42 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
228 mkk1 24h BTH rep 0.32 >More info 0.60 >More info Col-0 24h BTH rep Original data GEO bulk
229 hrcC 0.35 >More info 0.57 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
230 Fenclorim 24hr 0.34 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
231 oligomycin 1 h 0.35 >More info 0.57 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
232 oas-a1.1 Cd 18h 0.37 >More info 0.54 >More info Cd 18h root Root Original data GEO bulk
233 Root -Cs 0.36 >More info 0.55 >More info Control-root Original data GEO bulk
234 24h light (+Lincomycin) 0.32 >More info 0.59 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
235 INA 0.34 >More info 0.57 >More info CK INA seedling Original data
236 ice1 control 0.50 >More info 0.40 >More info WT control Original data GEO bulk
237 Norflurazon 0.37 >More info 0.53 >More info Col-0 Original data GEO bulk
238 leaf blade in D 0.36 >More info 0.54 >More info leaf blade in WL leaf blades Original data GEO bulk
239 gabaculin 0.39 >More info 0.51 >More info WT Col-0 seedling Original data GEO bulk
240 ice1 6H Cold 0.40 >More info 0.50 >More info WT 6H Cold Original data GEO bulk
241 Norflurazon 0.37 >More info 0.53 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
242 sfr6 drought -0.33 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
243 6-trichlorophenoxyacetic acid 3 h 0.21 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
244 Laer Flg22(Agrobacterium) 2h 0.36 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
245 mil4 sid2 0.36 >More info 0.53 >More info Col rosettes Original data GEO bulk
246 rosettes WT drought 0.59 >More info 0.30 >More info rosettes WT watered Original data GEO bulk
247 sni1 0.32 >More info 0.57 >More info WT Original data GEO bulk
248 oligomycin 4 h 0.34 >More info 0.54 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
249 LTN008-2 aza-dc 0.50 >More info 0.38 >More info LTN012-2 Mock Original data
250 ABA JA 24h 0.24 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
251 msg2-BR -0.38 >More info -0.50 >More info BR BR dark-grown seedlings Original data GEO bulk
252 anac017-2 AntimycinA 3h -0.37 >More info -0.51 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
253 seedlings protease IV 0.36 >More info 0.52 >More info seedlings nontreated control whole seedling Original data
254 OsSAP11 expressing -0.34 >More info -0.53 >More info WT seedlings Original data GEO bulk
255 Bur-0-3h IAA 0.52 >More info 0.35 >More info Bur-0h IAA whole plant Original data GEO bulk
256 CMV-A2b mutant 0.37 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
257 Col-0 low oxygen 0.30 >More info 0.57 >More info Col-0 control low oxygen root Original data GEO bulk
258 Laer pretreat GA Flg22 2h 0.53 >More info 0.33 >More info Laer pretreat water control leaf discs Original data GEO bulk
259 toc1-1-81hr 0.18 >More info 0.68 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
260 gpa1 -ABA LF 0.33 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
261 toc1-1-61hr 0.26 >More info 0.60 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
262 DC3000 2 h (leaf) 0.33 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
263 sid2-1 cold -0.58 >More info -0.27 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
264 Heat shock optimum 0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
265 CBF3 0mM NaCl 0.31 >More info 0.53 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
266 Whole root - low pH 6H 0.34 >More info 0.50 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
267 WT Col-0 Bgh inoculated 0.32 >More info 0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
268 seedlings +5AC 0.33 >More info 0.50 >More info control seedlings 10-day old whole seedling Original data GEO bulk
269 gpa1-4/agb1-2 ozone 2d -0.15 >More info -0.68 >More info Col ozone 2d ozone Original data GEO bulk
270 Shoot -Cs 0.18 >More info 0.65 >More info Control-shoot Original data GEO bulk
271 Col-0 DCA 6d 0.62 >More info 0.21 >More info Col-0 MOCK 6d Original data GEO bulk
272 CeO2 germinant -0.24 >More info -0.59 >More info Millipore Water germinant CeO2 seedling Original data
273 ein3 eil1 JA -0.50 >More info -0.32 >More info JA Whole seedling Original data GEO bulk
274 mkk2 24h BTH rep 0.28 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
275 Stem tissue 2 days NAA 0.32 >More info 0.50 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
276 phyB mutant 16C 4hrs 0.52 >More info 0.29 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
277 Col-0 V. longisporum-inoculated 48 hpi 0.27 >More info 0.54 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
278 Sha-3h IAA 0.59 >More info 0.22 >More info Sha-0h IAA whole plant Original data GEO bulk
279 Total RNA csp1 cold 0.51 >More info 0.29 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
280 rosettes myoox drought 0.50 >More info 0.30 >More info rosettes myoox watered Original data GEO bulk
281 Aerobic e1 ate2 0.51 >More info 0.29 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
282 vtc2-1 -0.28 >More info -0.52 >More info Col-0 whole plant Original data GEO bulk
283 WT+H2O2 0.23 >More info 0.57 >More info WT H2O2 Original data GEO bulk
284 pip3 At2g19270 TDNA 9 0.27 >More info 0.52 >More info Col-0 whole plant Original data GEO bulk
285 wavy 0.29 >More info 0.50 >More info WT Original data GEO bulk
286 4C 7d(SOIL) 0.50 >More info 0.28 >More info 4C 0h(SOIL) Original data GEO bulk
287 Cd 24h root -0.27 >More info -0.51 >More info WT-Untreated Shoot Original data GEO bulk
288 root longitudinal zone-1 low sulfur -0.27 >More info -0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
289 siliques AtHb1 control 0.24 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
290 WT 3H Cold 0.24 >More info 0.52 >More info WT control Original data GEO bulk
291 Shoot submergence 7h 0.75 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
292 P.p 2.5hai 0.25 >More info 0.50 >More info At-Control roots Original data GEO bulk
293 Col-0-3h IAA 0.53 >More info 0.21 >More info Col-0-0h IAA whole plant Original data GEO bulk
294 Col-0 Flg22 4h 0.17 >More info 0.56 >More info Col-0 H2O 4h Original data GEO bulk
295 Bay-0-3h IAA 0.51 >More info 0.22 >More info Bay-0-0h IAA whole plant Original data GEO bulk
296 KO-nudx19 leaves 0.54 >More info 0.19 >More info WT leaves rosette leaves Original data
297 tunicamycin -0.18 >More info -0.55 >More info DMF Original data GEO bulk
298 cys-c1 leaf -0.54 >More info -0.18 >More info Leaf-WT leaves Original data GEO bulk
299 seed germinating in countinuous light 24h SL 0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
300 WT NAA 2h 0.50 >More info 0.21 >More info WT 0h Leaf tissue Original data GEO bulk
301 fil-8 yab3-2 0.20 >More info 0.51 >More info wt Apices Original data GEO bulk
302 Cd 18h root -0.16 >More info -0.54 >More info WT-Untreated Root Original data GEO bulk
303 toc1-1-85hr 0.03 >More info 0.67 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
304 Chemically 0.10 >More info 0.60 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
305 light -0.51 >More info -0.18 >More info dark light seedling Original data GEO bulk
306 agb1 gpa1 -ABA LF 0.14 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
307 Root -K 0.18 >More info 0.50 >More info Control-root Original data GEO bulk
308 seedling 3h after HZE WT 0.65 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
309 rao2 H2O2 3h -0.17 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
310 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
311 cat2-short-day 4d 0.08 >More info 0.58 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
312 npr1-3 MOCK 48h -0.11 >More info -0.53 >More info Col-0 MOCK 48h Original data GEO bulk
313 agb1 -ABA LF 0.12 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
314 Mutant lwd1_lwd2 0.06 >More info 0.56 >More info Wildtype for phy mutants Original data GEO bulk
315 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.06 >More info 0.56 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
316 NAA -AA 0.50 >More info 0.12 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
317 IAA/inhibitor B Treated 0.04 >More info 0.58 >More info IAA Treated Original data GEO bulk
318 Dark 2day ivd 0.56 >More info -0.01 >More info 0h ivd Original data
319 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.50 >More info -0.05 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
320 HRE1-RNAi20 normoxia -0.01 >More info -0.54 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
321 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
322 FLIGHT TAGESB plate 0.54 >More info 0.00 >More info GROUND CONTROL TAGESB plate Original data
323 ahg2-1sid2-2 -0.01 >More info 0.55 >More info WT (Col) control Original data GEO bulk
324 AsAKiin11 T1 -0.03 >More info 0.57 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
325 arp6-10 12 ºC 0.02 >More info -0.54 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
326 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
327 Mutant bri1 -0.01 >More info 0.50 >More info Ws-2 Original data Comparison of plant hormone related mutant
328 20h Col-0 -0.07 >More info 0.54 >More info 00h Col-0 Original data GEO bulk
329 HairpinZ 4 h (leaf) 0.50 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
330 Shoot apex inflorescence (after bolting) -0.22 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
331 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
332 4d red light grown hmr-22 seedlings 0.52 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data