4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on sid2-1 cold
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List of experiments correlated with "sid2-1 cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
sid2-1 cold		 Correlation to
sid2-1 cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 sid2-1 cold 1.00 >More info 1.00 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
2 aba3-1 -0.82 >More info -0.81 >More info wt Original data GEO bulk
3 camta1/3 warm -0.78 >More info -0.84 >More info WT warm entire aerial part Original data GEO bulk
4 eds16 whole leaf 5dpi 0.79 >More info 0.83 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
5 cpr5 -0.83 >More info -0.79 >More info WT(COL) Original data GEO bulk
6 Elevated CO2 AMPLE N NIGHT -0.80 >More info -0.81 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
7 Elevated CO2 AMPLE N DAY -0.81 >More info -0.80 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
8 Col whole leaf 5dpi -0.79 >More info -0.81 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
9 cpr5scv1 -0.83 >More info -0.76 >More info WT(COL) Original data GEO bulk
10 del1-1 mutant 5d uninfected -0.78 >More info -0.80 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
11 UV Stress 24 h (shoot) -0.79 >More info -0.79 >More info Stress mock 24 h (shoot) Original data Stress treatments
12 WT-SA -0.78 >More info -0.80 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
13 camta2/3 warm -0.77 >More info -0.80 >More info WT warm entire aerial part Original data GEO bulk
14 CMV-WT -0.79 >More info -0.78 >More info Mock-At Aerial tissues Original data GEO bulk
15 Col whole leaf 7dpi -0.78 >More info -0.79 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
16 cpr5 -0.79 >More info -0.78 >More info WT seedling Original data GEO bulk
17 Col-0 INA 48h -0.75 >More info -0.81 >More info Col-0 MOCK 48h Original data GEO bulk
18 S58-2 -0.81 >More info -0.75 >More info wt Original data GEO bulk
19 Mutant siz1-3 (Drought) -0.78 >More info -0.78 >More info Col-0 (Drought) Original data GEO bulk
20 siz1-3 drought -0.78 >More info -0.78 >More info Col-0 drought Original data GEO bulk
21 S15-118 -0.82 >More info -0.74 >More info wt Original data GEO bulk
22 35S:RPS4 eds1-2 8h 0.79 >More info 0.77 >More info 35S:RPS4 8h leaves Original data
23 camta3-1 -0.76 >More info -0.79 >More info WT Original data GEO bulk
24 camta3-2 -0.74 >More info -0.81 >More info WT Original data GEO bulk
25 sid2 0.77 >More info 0.78 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
26 pmr5 pmr6 -0.80 >More info -0.75 >More info Col-0 Original data GEO bulk
27 IMI 4mM -0.76 >More info -0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
28 WT powdery mildew -0.78 >More info -0.76 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
29 ataf1-1 mutant Col-0 Bgh inoculated -0.77 >More info -0.77 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
30 edr1 18 h powdery mildew -0.78 >More info -0.76 >More info Col-0 18 h powdery mildew Original data GEO bulk
31 35S:RPS4 eds1-2 24h 0.78 >More info 0.75 >More info 35S:RPS4 24h leaves Original data
32 Col-0 INA 6d -0.77 >More info -0.76 >More info Col-0 MOCK 6d Original data GEO bulk
33 A. thaliana-A. lyrata hybrid 0.79 >More info 0.74 >More info A. thaliana mature leaves before flowering Original data GEO bulk
34 cpr5npr1svi1 -0.79 >More info -0.74 >More info WT(COL) Original data GEO bulk
35 camta1/2/3 warm -0.78 >More info -0.75 >More info WT warm entire aerial part Original data GEO bulk
36 Cor hrpS 10h -0.76 >More info -0.77 >More info Mock 10h Cor hrpS Original data GEO bulk
37 Col ozone 3h -0.71 >More info -0.82 >More info Col clean-air 3h ozone Original data GEO bulk
38 cpr5npr1 -0.79 >More info -0.73 >More info WT(COL) Original data GEO bulk
39 WT cold -0.83 >More info -0.69 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
40 SLWF infested -0.79 >More info -0.73 >More info SLWF uninfested rosette tissue Original data GEO bulk
41 Mutant siz1-3 -0.74 >More info -0.77 >More info Col-0 Original data GEO bulk
42 siz1-3 control -0.74 >More info -0.77 >More info Col-0 control Original data GEO bulk
43 Mutant NahG(leaf) 0.77 >More info 0.74 >More info Col-0 (leaf) Original data GEO bulk
44 CLO 4mM -0.77 >More info -0.73 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
45 dense canopy -0.78 >More info -0.72 >More info single (control) petiole Original data GEO bulk
46 eds16 whole leaf 6hpi 0.71 >More info 0.78 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
47 camta1/2/3 24h cold -0.75 >More info -0.74 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
48 sni1 -0.75 >More info -0.74 >More info WT Original data GEO bulk
49 downy mildew cotyledons late stage -0.76 >More info -0.73 >More info mock inoculated Cotyledons Original data GEO bulk
50 pepr1-1 Pepr2-3 +Pep2 2h 0.75 >More info 0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
51 Col ozone 2d -0.71 >More info -0.78 >More info Col clean-air 2d ozone Original data GEO bulk
52 pmr5 -0.77 >More info -0.72 >More info Col-0 Original data GEO bulk
53 Col whole leaf amplified 5 dpi -0.72 >More info -0.77 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
54 smg7b-1 -0.75 >More info -0.73 >More info WT whole plant Original data GEO bulk
55 cs26 short-day 0.80 >More info 0.68 >More info Leaves-WT-SD leaf Original data GEO bulk
56 Cor 24h -0.77 >More info -0.71 >More info Mock 24h Cor Original data GEO bulk
57 efr-1 +elf18 10h 0.74 >More info 0.74 >More info WT +elf18 10h elf18 Original data GEO bulk
58 A6 mutant -0.82 >More info -0.65 >More info WT rosette leaves Rosette leaves Original data GEO bulk
59 GST NPP1 4 h (leaf) -0.71 >More info -0.76 >More info Mock 4 h (leaf) Original data Elicitor treatments
60 bak1-3 +Pep2 10h -0.74 >More info -0.73 >More info WT +Pep2 10h Pep2 Original data GEO bulk
61 vtc2 (I) -0.77 >More info -0.70 >More info Col (I) rosette Original data GEO bulk
62 Elevated CO2 expanding leaf -0.76 >More info -0.71 >More info Ambient CO2 expanding leaf expanding leaf Original data
63 vtc1 (II) -0.73 >More info -0.73 >More info Col (II) rosette Original data GEO bulk
64 OH1 -0.72 >More info -0.74 >More info Col-0 leaves Original data GEO bulk
65 seedlings-week-old RECA1-overexpressing
transgenic		 -0.70 >More info -0.76 >More info seedlings-week-old Col-0 seedlings Original data
66 upf3 -0.78 >More info -0.68 >More info WT whole plant Original data GEO bulk
67 mkk1/mkk2 control rep -0.78 >More info -0.68 >More info Col-0 Time 0 rep Original data GEO bulk
68 ceh1 mutant -0.77 >More info -0.68 >More info Parent line Original data
69 edr1 36 h powdery mildew -0.76 >More info -0.69 >More info Col-0 36 h powdery mildew Original data GEO bulk
70 npr1 sni1 brca2a SA 0.73 >More info 0.72 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
71 myb3 myb3r4d -0.75 >More info -0.70 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
72 DFPM -0.71 >More info -0.73 >More info control Original data GEO bulk
73 upf1 -0.77 >More info -0.66 >More info WT whole plant Original data GEO bulk
74 WT 3h -P -0.66 >More info -0.77 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
75 Light 3day wt 0.79 >More info 0.64 >More info 0h wt Original data
76 WT-NOCO2 INFECTED -0.74 >More info -0.68 >More info WT-MOCK Original data GEO bulk
77 bio4-1 mutant leaves -0.73 >More info -0.69 >More info WT leaves leaves Original data GEO bulk
78 npr1 sni1 SA -0.76 >More info -0.66 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
79 cs26 long day -0.76 >More info -0.66 >More info Leaves-WT-LD leaf Original data GEO bulk
80 pvip1 pvip2 -0.79 >More info -0.63 >More info Col-0 whole rosettes Original data GEO bulk
81 OE WRKY63.3 high light -0.70 >More info -0.72 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
82 Elevated CO2 fully expanded leaf -0.77 >More info -0.64 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
83 NahG 0.71 >More info 0.70 >More info Col-0 Leaves Original data GEO bulk
84 ein2-1 9 hpi A. brassicicola -0.74 >More info -0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 Col-0 9 hpi A. brassicicola -0.67 >More info -0.73 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
86 Col whole leaf 5 dpi -0.67 >More info -0.73 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
87 bio4-1 mutant watered00µM biotin leaves 0.72 >More info 0.68 >More info bio4-1 mutant leaves leaves Original data GEO bulk
88 eds16 whole leaf 3dpi 0.61 >More info 0.78 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
89 bZIP1ko mutant N+Light- -0.71 >More info -0.68 >More info WT-sib N+Light- whole plant Original data GEO bulk
90 Col-0 DCA 48h -0.63 >More info -0.76 >More info Col-0 MOCK 48h Original data GEO bulk
91 Cor 10h -0.70 >More info -0.69 >More info Mock 10h Cor Original data GEO bulk
92 INA -0.60 >More info -0.78 >More info CK INA seedling Original data
93 RPL18 TuMV inoculated total RNA -0.71 >More info -0.67 >More info mock inoculated total RNA PO Original data GEO bulk
94 BLM+INA -0.75 >More info -0.63 >More info CK BLM and INA seedling Original data
95 eds16 whole leaf 0h UI 0.54 >More info 0.84 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
96 gh3.5D uninoculated 0.75 >More info 0.63 >More info Col-0 48 hpi Original data GEO bulk
97 pmr4-1 powdery mildew -0.76 >More info -0.62 >More info WT powdery mildew uninoculated Original data GEO bulk
98 npr1-1 SA 0.72 >More info 0.65 >More info Col-0 SA complete seedling Original data
99 wrky33 Bc inoculation 14h -0.82 >More info -0.55 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
100 UV -0.77 >More info -0.60 >More info WT aerial region Original data GEO bulk
101 HopZ1a treated -0.68 >More info -0.69 >More info col Original data GEO bulk
102 Primisulfuron EC50 -0.72 >More info -0.64 >More info Carrier (primisulfuron) Original data GEO bulk
103 RPL18 TuMV inoculated polysomal RNA -0.69 >More info -0.67 >More info mock inoculated polysomal RNA PO Original data GEO bulk
104 CMP 4hr -0.71 >More info -0.65 >More info Acetone 4hr root Original data GEO bulk
105 anac017-2 AntimycinA 3h 0.65 >More info 0.71 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
106 Te ozone -0.78 >More info -0.58 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
107 LTN008-2 aza-dc -0.77 >More info -0.59 >More info LTN012-2 Mock Original data
108 coi1-16 ein2 sid2 ctrl 0.79 >More info 0.57 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
109 GST 4 h (leaf) -0.61 >More info -0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
110 wavy -0.72 >More info -0.63 >More info WT Original data GEO bulk
111 toc1-1-49hr -0.73 >More info -0.62 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
112 pepr1-1 Pepr2-3 +Pep2 10h 0.71 >More info 0.64 >More info WT +Pep2 10h Pep2 Original data GEO bulk
113 smg5-2 -0.72 >More info -0.63 >More info WT whole plant Original data GEO bulk
114 abi4 vtc2 (I) -0.71 >More info -0.64 >More info Col (I) rosette Original data GEO bulk
115 Sulfometuron EC50 -0.68 >More info -0.66 >More info Carrier Original data GEO bulk
116 8h-DC3000 avrRpm1 -0.71 >More info -0.63 >More info 8h-DC3000 leaves Original data GEO bulk
117 eds16 whole leaf 7dpi 0.59 >More info 0.75 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
118 20d after anthesis -0.73 >More info -0.60 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
119 miR393 flg22 2h -0.71 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
120 P.syringae AvrRpt2 4 h (leaf) -0.70 >More info -0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
121 35S::ERF104 Flg22 4h -0.63 >More info -0.70 >More info 35S::ERF104 H2O 4h Original data GEO bulk
122 SA 4mM -0.77 >More info -0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
123 Time-0 chr11-1chr17-1 0.76 >More info 0.56 >More info Time-0 Col-0 leaf explants Original data
124 WT +elf18 10h -0.72 >More info -0.60 >More info WT untreated elf18 Original data GEO bulk
125 lht1 untreated -0.71 >More info -0.61 >More info WT untreated untreated leaf Original data GEO bulk
126 +1.6 mM Tween 20 1 h. -0.61 >More info -0.71 >More info +distilled water 1 h. Original data GEO bulk
127 Triazolopyrimidine EC50 -0.70 >More info -0.62 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
128 WT Col-0 Bgh inoculated -0.62 >More info -0.70 >More info WT Col-0 Un-inoculated Original data GEO bulk
129 CT101 ozone -0.79 >More info -0.52 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
130 seedlings protease IV -0.68 >More info -0.63 >More info seedlings nontreated control whole seedling Original data
131 aox1a:rpoTmp untreated -0.69 >More info -0.62 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
132 gh3.5-1D 48 hpi -0.74 >More info -0.57 >More info Col-0 uninoculated Original data GEO bulk
133 GA -0.65 >More info -0.66 >More info none GA Rosette Original data GEO bulk
134 CMP 24hr -0.66 >More info -0.65 >More info Acetone 24hr root Original data GEO bulk
135 pmr4-1 control -0.76 >More info -0.55 >More info WT control uninoculated Original data GEO bulk
136 Col-Luc WT 3h antimycin A -0.70 >More info -0.61 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
137 pho1 -0.77 >More info -0.53 >More info Col2WT Original data GEO bulk
138 pad4-PsmES4326-24hpi 0.62 >More info 0.68 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
139 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.77 >More info -0.53 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
140 atmospheric CO2 low Mg shoot -0.78 >More info -0.52 >More info atmospheric CO2 normal Mg shoot Shoot Original data
141 Shoot -Cs -0.58 >More info -0.72 >More info Control-shoot Original data GEO bulk
142 E.orontii Infection 3 day -0.60 >More info -0.70 >More info Uninfection 3 day Original data Elicitor treatments
143 CAX1/CAX3 mutant -0.70 >More info -0.60 >More info Col whole plant Original data GEO bulk
144 WT +elf18 2h -0.66 >More info -0.63 >More info WT untreated elf18 Original data GEO bulk
145 ORS1 induced -0.69 >More info -0.60 >More info mock-induced rosette leaves Original data GEO bulk
146 ice1 6H Cold -0.63 >More info -0.66 >More info WT 6H Cold Original data GEO bulk
147 Col-0 48 hpi -0.73 >More info -0.56 >More info Col-0 uninoculated Original data GEO bulk
148 D2O -0.71 >More info -0.58 >More info H2O seedling Original data GEO bulk
149 Flagellin 4 h (leaf) -0.61 >More info -0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
150 3x(m) -0.62 >More info -0.66 >More info 2x two week old seedlings Original data
151 WT leaves - Fe -0.77 >More info -0.51 >More info WT leaves + Fe Leaves Original data GEO bulk
152 Col laser microdissected 5 dpi -0.64 >More info -0.64 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
153 WT AntimycinA 3h -0.60 >More info -0.68 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
154 WT 2-4h Xanthomonas -0.58 >More info -0.70 >More info WT T0 Original data GEO bulk
155 AFB1 flg22 2h -0.71 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
156 hrcC -0.59 >More info -0.69 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
157 Lipopolysaccaride4 h (leaf) -0.59 >More info -0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
158 sid2-2 safener 0.59 >More info 0.68 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
159 irradiated leaf (WT 1d) -0.69 >More info -0.58 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
160 WT Bc inoculation 14h -0.74 >More info -0.53 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
161 low CO2 + light -0.71 >More info -0.56 >More info normal CO2 + light Original data GEO bulk
162 HopZ1a treated ulp1c ulp1d -0.67 >More info -0.60 >More info col Original data GEO bulk
163 Octopus overexpressor 35SDYG25 -0.63 >More info -0.64 >More info WS Original data GEO bulk
164 WT NAA/flg 2h -0.70 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
165 miR393 flg22 1h -0.63 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
166 Laer Flg22+GA 2h -0.66 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
167 Laer Flg22 2h -0.63 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
168 ice1 control -0.69 >More info -0.56 >More info WT control Original data GEO bulk
169 AvrRpt2 Col-0 6hpi -0.67 >More info -0.58 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
170 C24 ozone -0.78 >More info -0.47 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
171 npr1-PsmES4326-24hpi 0.60 >More info 0.65 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
172 coi1-16 ein2 sid2 ozone -0.77 >More info -0.48 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
173 A. lyrata 0.74 >More info 0.51 >More info A. thaliana mature leaves before flowering Original data GEO bulk
174 B.cinerea 18 h infection -0.56 >More info -0.69 >More info Mock 18 h Original data Botrytis cinerea infection
175 Botrytis cinerea 18h -0.56 >More info -0.69 >More info control 18h Original data GEO bulk
176 phyB mutant 22C 10hrs 0.59 >More info 0.66 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
177 pnp1-1 1wk -P -0.68 >More info -0.56 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
178 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.73 >More info -0.51 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
179 irradiated leaf (cmt 1d) -0.69 >More info -0.55 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
180 npr1 sni1 ssn2 SA 0.69 >More info 0.55 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
181 overexpresser LBD38 in -N 0.72 >More info 0.52 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
182 rosette leaves fdh -0.72 >More info -0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
183 WT flg22 1h -0.65 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
184 Compost -0.71 >More info -0.53 >More info Perlite Compost Original data GEO bulk
185 lht1 PstDC3000 48h -0.66 >More info -0.58 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
186 col-5 DC3000 12h -0.58 >More info -0.66 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
187 oligomycin 4 h -0.66 >More info -0.57 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
188 abi4-102 (II) -0.70 >More info -0.53 >More info Col (II) rosette Original data GEO bulk
189 col-5 hrpA 12h -0.52 >More info -0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
190 Shoot -K -0.68 >More info -0.55 >More info Control-shoot Original data GEO bulk
191 K starvation (shoot) -0.68 >More info -0.55 >More info Ws (shoot) Original data GEO bulk
192 rsa3-1 Na 24h -0.55 >More info -0.67 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
193 Laer Flg22 1h -0.65 >More info -0.57 >More info Laer Control leaf discs Original data GEO bulk
194 Leafminer locally damaged thaliana seedlings -0.65 >More info -0.57 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
195 35S:RPS4 eds1-2 2h 0.53 >More info 0.69 >More info 35S:RPS4 2h leaves Original data
196 OE WRKY63.3 -0.59 >More info -0.63 >More info OE WRKY40.4 none leaf Original data GEO bulk
197 WT NAA/flg 1h -0.62 >More info -0.60 >More info WT 0h Leaf tissue Original data GEO bulk
198 Col-0 ozone -0.73 >More info -0.49 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
199 Fenclorim 4hr -0.61 >More info -0.61 >More info Acetone 4hr root Original data GEO bulk
200 csn5 (csn5a-2 csn5b) light -0.71 >More info -0.51 >More info WT light Original data GEO bulk
201 PAHs stress -0.69 >More info -0.53 >More info exp control phenanthrene whole plants Original data GEO bulk
202 Atwrky63 0.79 >More info 0.42 >More info Col0 none leaf Original data GEO bulk
203 Imidazolinone EC50 -0.72 >More info -0.49 >More info Carrier (Imidazolinone) Original data GEO bulk
204 35:SUB1A -0.73 >More info -0.48 >More info WT whole seedling Original data GEO bulk
205 sid2-PsmES4326-24hpi 0.61 >More info 0.60 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
206 AFB1 flg22 1h -0.64 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
207 Phaseolicola 2 h (leaf) -0.58 >More info -0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
208 flu -0.61 >More info -0.59 >More info WT Col Original data GEO bulk
209 atgsnor1-1 0.78 >More info 0.42 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
210 Col leaves 48h LT -0.70 >More info -0.50 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
211 PstDC3000 48h -0.51 >More info -0.69 >More info WT untreated 48hr leaf Original data GEO bulk
212 WT in -N -0.71 >More info -0.49 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
213 Col whole leaf 3dpi -0.47 >More info -0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
214 AvrRpm1 2 h (leaf) -0.56 >More info -0.63 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
215 edr1 0 h powdery mildew -0.64 >More info -0.55 >More info Col-0 0 h powdery mildew Original data GEO bulk
216 msh1 albino -0.56 >More info -0.63 >More info WT aerial part Original data GEO bulk
217 M6PR transgenic 0mM NaCl -0.71 >More info -0.48 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
218 cat2-hCO2 0.77 >More info 0.42 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
219 ataf1-1 mutant Col-0 Un-inoculated 0.74 >More info 0.45 >More info WT Col-0 Un-inoculated Original data GEO bulk
220 apk1 apk2 -0.74 >More info -0.45 >More info Col0-control whole rosette Original data GEO bulk
221 Laer Flg22+GA 1h -0.65 >More info -0.54 >More info Laer Control leaf discs Original data GEO bulk
222 npr1-3 DCA 48h -0.65 >More info -0.54 >More info npr1-3 MOCK 48h Original data GEO bulk
223 dor control -0.71 >More info -0.48 >More info WT control Original data GEO bulk
224 hrpA 7h -0.53 >More info -0.66 >More info Mock 7h hrpA Original data GEO bulk
225 flu over-tAPX -0.56 >More info -0.63 >More info WT Col Original data GEO bulk
226 atmospheric CO2 high Mg shoot -0.76 >More info -0.42 >More info atmospheric CO2 normal Mg shoot Shoot Original data
227 eds16 whole leaf 7d UI 0.58 >More info 0.60 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
228 Cycloheximide 3 h -0.58 >More info -0.60 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
229 WT flg22 2h -0.60 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
230 Osmotic Stress 24 h (shoot) -0.66 >More info -0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
231 Laer treat paclobutrazol (PAC) -0.51 >More info -0.66 >More info Laer Control leaf discs Original data GEO bulk
232 DC3000 24h -0.79 >More info -0.38 >More info Mock 24h DC3000 Original data GEO bulk
233 E.coli TUV86 2 fliC 7h -0.49 >More info -0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
234 S14-150 -0.74 >More info -0.42 >More info wt Original data GEO bulk
235 AgNO3 3 h -0.59 >More info -0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
236 nas4x leaves + Fe -0.75 >More info -0.41 >More info WT leaves + Fe Leaves Original data GEO bulk
237 R. solani AG2-1 -0.61 >More info -0.54 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
238 Pto inoculated -0.63 >More info -0.52 >More info col Original data GEO bulk
239 cat2-long-day 2d 0.76 >More info 0.39 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
240 dor drought -0.64 >More info -0.51 >More info WT drought Original data GEO bulk
241 Col-0 SA -0.56 >More info -0.59 >More info Col-0 Original data GEO bulk
242 mpk6-ko Flg22 4h -0.54 >More info -0.61 >More info mpk6-ko H2O 4h Original data GEO bulk
243 erf104-ko Flg22 4h -0.44 >More info -0.71 >More info erf104-ko H2O 4h Original data GEO bulk
244 plant (tga2-5-6) 4h control -0.64 >More info -0.50 >More info plant (Col-0) 4h control Original data GEO bulk
245 ice1 24H Cold -0.59 >More info -0.55 >More info WT 24H Cold Original data GEO bulk
246 P.p 10.5hai -0.55 >More info -0.59 >More info At-Control roots Original data GEO bulk
247 SA -0.64 >More info -0.50 >More info WT mock Whole seedling Original data GEO bulk
248 ein5-1 ski2-3 -0.67 >More info -0.47 >More info Col-0 aerial tissue Original data
249 leaf rlt1-1rlt2-1 0.64 >More info 0.50 >More info leaf Col-0 leaf Original data GEO bulk
250 bHLH122 ox 0.56 >More info 0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
251 Mutant tga2_5_6 -0.64 >More info -0.50 >More info Col-0 Original data GEO bulk
252 4h decapitation 0.53 >More info 0.61 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
253 4C 2h(SOIL) -0.71 >More info -0.43 >More info 4C 0h(SOIL) Original data GEO bulk
254 dde2-2 9 hpi A. brassicicola -0.52 >More info -0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
255 Pst-DC3000(avrRpm1)-4hpi -0.69 >More info -0.44 >More info Pst-DC3000-4hpi Original data GEO bulk
256 petiole in D -0.60 >More info -0.53 >More info petiole in WL petioles Original data GEO bulk
257 mkk1/mkk2 24h BTH rep -0.58 >More info -0.55 >More info Col-0 24h BTH rep Original data GEO bulk
258 Seedling KUA1-IOX est -0.55 >More info -0.57 >More info Seedling KUA1-IOX mock Original data
259 E.coli 0157 H7 7h -0.49 >More info -0.63 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
260 Mutant ufo-1(flower) -0.65 >More info -0.46 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
261 coi1-2 -0.46 >More info -0.65 >More info Col-0 mock Whole seedling Original data GEO bulk
262 anac017-1 H2O2 3h 0.54 >More info 0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
263 P.p 30hai -0.57 >More info -0.54 >More info At-Control roots Original data GEO bulk
264 P.p 6hai -0.59 >More info -0.51 >More info At-Control roots Original data GEO bulk
265 oas-a1.1 Cd 18h -0.50 >More info -0.60 >More info Cd 18h root Root Original data GEO bulk
266 scrm-D -0.56 >More info -0.54 >More info Col-0 WT whole seedling Original data GEO bulk
267 IRP1-OE-Fe--shoot -0.67 >More info -0.43 >More info COL-0-Fe--shoot shoot Original data
268 toc1-1-57hr -0.61 >More info -0.49 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
269 mil4 BTH -0.53 >More info -0.56 >More info Col BTH rosettes Original data GEO bulk
270 Constans-mutant -0.59 >More info -0.50 >More info Col control above-ground whole plant Original data GEO bulk
271 P.p 2.5hai -0.50 >More info -0.59 >More info At-Control roots Original data GEO bulk
272 Mature callus -0.60 >More info -0.49 >More info Young callus hypocotyls Original data GEO bulk
273 oxt6 mutant 0.60 >More info 0.49 >More info WT Original data GEO bulk
274 Rsch CA 0.60 >More info 0.49 >More info Col CA Leaves Original data
275 Col-0 C2H4 24h -0.50 >More info -0.59 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
276 Col-0 under 4 days salt -0.53 >More info -0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
277 pad2-PsmES4326-24hpi 0.64 >More info 0.44 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
278 21h-DC3000 avrRpm1 0.66 >More info 0.42 >More info 21h-DC3000 leaves Original data GEO bulk
279 atgsnor1-1-avrB-6h -0.51 >More info -0.57 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
280 Tsu -Fe 48h Shoots -0.57 >More info -0.51 >More info Tsu +Fe 24h Shoots Original data GEO bulk
281 amiRAP aerobic 0.42 >More info 0.66 >More info WT aerobic aerobic Original data GEO bulk
282 hrpA fliC 7h -0.49 >More info -0.59 >More info Mock 7h hrpA fliC Original data GEO bulk
283 Chitin -0.62 >More info -0.45 >More info Col C Original data GEO bulk
284 tbf1-SA 0.56 >More info 0.51 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
285 sid2-2 mock 0.43 >More info 0.64 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
286 sfr6 drought 0.50 >More info 0.57 >More info WT drought All aerial tissue Original data GEO bulk
287 Total RNA 35S:HF-RPL18 -0.71 >More info -0.36 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
288 Seedling-HeatStressed TOTALmRNA -0.59 >More info -0.48 >More info Seedling-control TOTALmRNA seedling Original data
289 Col-0-avrB-6h -0.48 >More info -0.59 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
290 mkk2 24h BTH rep -0.53 >More info -0.53 >More info Col-0 24h BTH rep Original data GEO bulk
291 shoots bhlh100/101 0uM Fe -0.58 >More info -0.48 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
292 WT +Pep2 10h -0.67 >More info -0.39 >More info WT untreated Pep2 Original data GEO bulk
293 Shoot apex inflorescence (after bolting) 0.41 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
294 Laer pretreat GA Flg22 0h -0.60 >More info -0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
295 cdpk6-yfp -0.72 >More info -0.33 >More info Kan seedlings Original data GEO bulk
296 Root GLU1-KO 0.50 >More info 0.55 >More info Root Col(0) roots Original data GEO bulk
297 penta Alternaria 3dpi -0.59 >More info -0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
298 Col whole leaf 1dpi 0.61 >More info 0.44 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
299 expressing C2 MeJA 0.56 >More info 0.49 >More info LUC2T Original data GEO bulk
300 abh1 -ABA -0.69 >More info -0.36 >More info Col-0 -ABA Original data GEO bulk
301 toc1-1-65hr -0.58 >More info -0.46 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
302 csn3-1 light -0.63 >More info -0.41 >More info WT light Original data GEO bulk
303 12h-DC3000 avrRpm1 -0.57 >More info -0.47 >More info 12h-DC3000 leaves Original data GEO bulk
304 sid2-1 warm 0.50 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
305 OE WRKY40.4 high light -0.52 >More info -0.52 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
306 safener treated -0.51 >More info -0.53 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
307 R. solani AG8 -0.61 >More info -0.43 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
308 Chitosan 3h Treatment -0.57 >More info -0.47 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
309 Leaf wounded -0.40 >More info -0.64 >More info Leaf control vegetative leaf Original data GEO bulk
310 WT chitooctaose -0.48 >More info -0.56 >More info WT water Original data GEO bulk
311 abi4-102 (I) -0.58 >More info -0.45 >More info Col (I) rosette Original data GEO bulk
312 AFB1 0h -0.68 >More info -0.35 >More info Col 0h Leaf Original data GEO bulk
313 ice1 3H Cold -0.57 >More info -0.46 >More info WT 3H Cold Original data GEO bulk
314 GO5; 0h switch to ambient CO2 concentrations; 0.78 >More info 0.25 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
315 Dry midday 0.66 >More info 0.37 >More info Wet midday water-limited whole rosette Original data GEO bulk
316 Col-0 mbs1-1 HL 3h 0.57 >More info 0.46 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
317 ERF96OE -0.53 >More info -0.50 >More info WT leaf Original data
318 Seedling-HeatStressed POLYSOMESmRNA -0.60 >More info -0.43 >More info Seedling-control POLYSOMESmRNA seedling Original data
319 Tsu -Fe 24h Shoots -0.65 >More info -0.38 >More info Tsu +Fe 24h Shoots Original data GEO bulk
320 GO5; 8h switch to ambient CO2 concentrations; -0.51 >More info -0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
321 toc1-1-53hr -0.76 >More info -0.27 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
322 SCR-GR Time 1H Dex -0.40 >More info -0.63 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
323 del1-1 5dpi -0.76 >More info -0.26 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
324 penta Pst DC3000 12hpi -0.68 >More info -0.34 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
325 auxin and brassinazole seedlings -0.61 >More info -0.41 >More info auxin seedlings Original data GEO bulk
326 Drought Stress 24 h (shoot) -0.63 >More info -0.39 >More info Stress mock 24 h (shoot) Original data Stress treatments
327 Bur-0-1h IAA -0.63 >More info -0.39 >More info Bur-0h IAA whole plant Original data GEO bulk
328 OE WRKY40.4 0.59 >More info 0.42 >More info OE WRKY40.4 none leaf Original data GEO bulk
329 til1-1 22C -0.57 >More info -0.44 >More info Col-0 22C Original data GEO bulk
330 FOX line K19624 -0.63 >More info -0.38 >More info empty vector control (T3) FOX lines Original data GEO bulk
331 leaf blade in D -0.48 >More info -0.53 >More info leaf blade in WL leaf blades Original data GEO bulk
332 8hr-pH4.5 -0.54 >More info -0.46 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
333 seedlings +5AC -0.62 >More info -0.38 >More info control seedlings 10-day old whole seedling Original data GEO bulk
334 Mutant coi1(leaf) 0.54 >More info 0.46 >More info Col-0 (leaf) Original data GEO bulk
335 ARR22-ox 0.52 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
336 Bur-0-3h IAA -0.59 >More info -0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
337 ISOXABEN 0.54 >More info 0.46 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
338 nia1nia2 -0.58 >More info -0.42 >More info Col-0 whole seedlings Original data GEO bulk
339 ABA DFPM -0.56 >More info -0.44 >More info control Original data GEO bulk
340 nas4x leaves - Fe 0.56 >More info 0.44 >More info WT leaves - Fe Leaves Original data GEO bulk
341 Mutant sav3-2 (WL) -0.32 >More info -0.68 >More info Col-0 (WL) Original data GEO bulk
342 seed germinating in countinuous light 24h SL 0.33 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
343 vte2-1 3d vernalization -0.44 >More info -0.56 >More info WT 3d vernalization Original data GEO bulk
344 sav3-2 light -0.32 >More info -0.68 >More info Col-0 light seedlings Original data GEO bulk
345 ex1ex2flu dark 8hours/30 minute light 0.62 >More info 0.37 >More info col dark 8hours/30 minute light Original data GEO bulk
346 CMV-A2b mutant -0.58 >More info -0.41 >More info Mock-At Aerial tissues Original data GEO bulk
347 oas-a1.1 shoot 0.57 >More info 0.42 >More info WT-Untreated Shoot Original data GEO bulk
348 DC3000 hrcC 2 h (leaf) -0.44 >More info -0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
349 rcf1-1 cold 24h -0.46 >More info -0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
350 sav1-1 light -0.37 >More info -0.62 >More info Col-0 light seedlings Original data GEO bulk
351 shoot-10 μM DEX- 6 hr -0.48 >More info -0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
352 apum23 -0.63 >More info -0.35 >More info WT (Col-3) aerial parts Original data GEO bulk
353 detached inflorescences 24h -0.40 >More info -0.58 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
354 WT+H2O2 -0.47 >More info -0.51 >More info WT H2O2 Original data GEO bulk
355 sta1 -0.63 >More info -0.34 >More info WT Original data GEO bulk
356 WT mitomycin C -0.73 >More info -0.24 >More info WT mock shoot apical meristem Original data
357 CHS-silenced type 0.65 >More info 0.32 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
358 Light 3day ivd -0.62 >More info -0.35 >More info 0h ivd Original data
359 DC3000 2 h (leaf) -0.43 >More info -0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
360 eds16 whole leaf 1dpi 0.35 >More info 0.62 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
361 total mRNA eif3k -0.47 >More info -0.50 >More info total mRNA WT aerial part Original data GEO bulk
362 psae1-3 stn7-1 -0.68 >More info -0.28 >More info WS rosette leaves Original data GEO bulk
363 6h volatiles Sp. HRO-C48 -0.40 >More info -0.56 >More info 6h untreated whole seedling Original data GEO bulk
364 0h hml -0.76 >More info -0.20 >More info 0h wt Original data
365 Mutant gh3.5-1D (AvrRpt2) -0.50 >More info -0.46 >More info Col-0 (AvrRpt2) Original data GEO bulk
366 35S:VND7-VP16-GR+CHX -0.51 >More info -0.45 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
367 Polysomal RNA 35S:HF-RPL18 cold -0.61 >More info -0.35 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
368 C24 UV1 0.74 >More info 0.22 >More info C24 mock UV seedling Original data
369 HARAP aerobic 0.38 >More info 0.58 >More info WT aerobic aerobic Original data GEO bulk
370 Dex-rga(delta17) 4h GA4+DEX 0.44 >More info 0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
371 cov1 cov2 stem Base -0.67 >More info -0.28 >More info WT stem Base stem Base Original data GEO bulk
372 35S::PI ap3-3 35S::AP-GR +DEX -0.55 >More info -0.40 >More info 0hr DEX Original data GEO bulk
373 Botrytis cinerea 48h -0.52 >More info -0.43 >More info control 48h Original data GEO bulk
374 Salicylic Acid 3 h -0.33 >More info -0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
375 chito-octamer -0.37 >More info -0.58 >More info Col Mock Original data GEO bulk
376 3x(p) -0.55 >More info -0.39 >More info 2x two week old seedlings Original data
377 Polysomal RNA 35S:HF-RPL18 -0.66 >More info -0.28 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
378 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.38 >More info 0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
379 irradiated leaf (cmt 5d) -0.64 >More info -0.30 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
380 35:SUB1C -0.59 >More info -0.35 >More info WT whole seedling Original data GEO bulk
381 overexpresser LBD37 in -N 0.60 >More info 0.34 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
382 SOS1 0mM NaCl -0.61 >More info -0.33 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
383 aphid infested -0.62 >More info -0.32 >More info control aphid infested Leaves Original data GEO bulk
384 tt4 -0.52 >More info -0.42 >More info Col-0 aerial part Original data
385 aphid infested -0.62 >More info -0.32 >More info CTR Original data GEO bulk
386 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.79 >More info 0.14 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
387 TNT-seedlings -0.37 >More info -0.56 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
388 Atss3 Light4 0.62 >More info 0.31 >More info Atss3 Dark0.5 Original data GEO bulk
389 Got7 UV -0.41 >More info -0.52 >More info Got7 mock UV seedling Original data
390 ckh1 CK200 -0.41 >More info -0.52 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
391 des1 water -0.55 >More info -0.37 >More info WT water water leaf Original data GEO bulk
392 agb1 -ABA LF -0.52 >More info -0.40 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
393 MIL4 ox BTH -0.53 >More info -0.39 >More info Col BTH Original data GEO bulk
394 mbd6 mutant thaliana 10-day-old seedling -0.57 >More info -0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
395 Laer pretreat JA Flg22 0h 0.31 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
396 12m.KNO3 -0.29 >More info -0.63 >More info To. KNO3 14 day old Roots Original data GEO bulk
397 abi1 hypocotyl -0.35 >More info -0.57 >More info Ler hypocotyl hypocotyl Original data GEO bulk
398 cat2-2; 8h switch to ambient CO2 concentrations; -0.68 >More info -0.23 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
399 Mutant arf2-6 0.51 >More info 0.40 >More info Col Original data GEO bulk
400 toc1-1-61hr -0.51 >More info -0.40 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
401 OE-HRA1 2HS  -0.59 >More info -0.32 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
402 Fenclorim 24hr -0.41 >More info -0.50 >More info Acetone 24hr root Original data GEO bulk
403 Col PSTDC3000 24h -0.77 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
404 npr1 sni1 ssn2 0.52 >More info 0.38 >More info npr1 sni1 water water seedling Original data GEO bulk
405 ape2 high light -0.65 >More info -0.25 >More info Ws-2 high light Original data GEO bulk
406 long 17-degree- -0.65 >More info -0.25 >More info control long Original data GEO bulk
407 tbf1-mock infiltration 0.53 >More info 0.37 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
408 shoot-10 μM DEX- 24hr -0.38 >More info -0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
409 Shoot P recovery -0.71 >More info -0.19 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
410 Total RNA 35S:HF-RPL18 cold -0.72 >More info -0.18 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
411 sid2-2 24hpi A. brassicicola 0.63 >More info 0.26 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
412 HSP90 Reduced RNAi-B1 -0.52 >More info -0.37 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
413 leaf chr11-1chr17-1 -0.54 >More info -0.35 >More info leaf Col-0 leaves Original data GEO bulk
414 stn7-1 0.60 >More info 0.29 >More info Col-0 rosette leaves Original data GEO bulk
415 Elevated CO2 leaf primordia -0.55 >More info -0.33 >More info Ambient CO2 leaf primordia leaf primordia Original data
416 calcicole ecotype Cal-0 -0.73 >More info -0.15 >More info Col-4 1 mM CaCl2 Original data GEO bulk
417 35S::IaTCP -0.62 >More info -0.26 >More info thaliana control secondary inflorescence Original data
418 Col-0 V. longisporum-inoculated 48 hpi -0.36 >More info -0.52 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
419 vtc2-1 0.59 >More info 0.29 >More info Col-0 whole plant Original data GEO bulk
420 bak1-3 +Pep2 2h -0.31 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
421 4C 1h -0.31 >More info -0.57 >More info 4C 0h Original data GEO bulk
422 P35S:rGRF3 -0.53 >More info -0.34 >More info WS Original data GEO bulk
423 sid2-avrB-6h 0.34 >More info 0.53 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
424 Bay-0-30min IAA -0.61 >More info -0.26 >More info Bay-0-0h IAA whole plant Original data GEO bulk
425 35S-MIF1 dark grown -0.50 >More info -0.37 >More info Dark-grown WT control Original data GEO bulk
426 WT 1mM phosphate 8 hours. 0.61 >More info 0.26 >More info WT control (not supplemented). Original data
427 Mutant ein2(leaf) 0.27 >More info 0.60 >More info Col-0 (leaf) Original data GEO bulk
428 sex1-3 -0.36 >More info -0.51 >More info Col-WT leaves Original data GEO bulk
429 WT+chitooctaose -0.22 >More info -0.65 >More info WT+water chitooctaose seedlings Original data GEO bulk
430 toc1-1-93hr -0.33 >More info -0.53 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
431 CeO2 germinant 0.31 >More info 0.55 >More info Millipore Water germinant CeO2 seedling Original data
432 A. halleri 0.59 >More info 0.27 >More info A. thaliana mature leaves before flowering Original data GEO bulk
433 IRP1-OE-Ctrl--shoot -0.60 >More info -0.26 >More info COL-0-Ctrl--shoot shoot Original data
434 WT-Dry -0.36 >More info -0.50 >More info WT-CK dehydration treatment 1h Original data
435 46T-CK -0.13 >More info -0.73 >More info WT-CK none Original data
436 MYB12OX -0.56 >More info -0.29 >More info Col-0 aerial part Original data
437 Apex mir-3TCP 14DAS 0.31 >More info 0.54 >More info Apex Col 14DAS Original data GEO bulk
438 miR 0h -0.69 >More info -0.16 >More info Col 0h Leaf Original data GEO bulk
439 eds16 laser microdissected 5 dpi 0.63 >More info 0.22 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
440 csn4-1 dark -0.50 >More info -0.35 >More info WT light Original data GEO bulk
441 Nicotinamide-49hr -0.27 >More info -0.58 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
442 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.51 >More info 0.33 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
443 Dry late day 0.52 >More info 0.32 >More info Wet late day water-limited whole rosette Original data GEO bulk
444 AtGATA2ox -0.51 >More info -0.33 >More info Col seedling Original data GEO bulk
445 Shoot -P 0.73 >More info 0.11 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
446 Full AC2 T2 -0.57 >More info -0.27 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
447 tbf1-elf18 0.50 >More info 0.33 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
448 WT 30μM arsenate 8 hours. -0.56 >More info -0.27 >More info WT control (not supplemented). Original data
449 MPK6 ox Shoot Hypoxia -0.63 >More info -0.20 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
450 miR393 0h 0.19 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
451 Mutant clv3-7(flower) 0.57 >More info 0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
452 SA 24h -0.22 >More info -0.61 >More info EtOH 24h 24hr Original data GEO bulk
453 spx1 spx2 complete -0.68 >More info -0.14 >More info WT complete seedlings Original data
454 Lip0 UV -0.62 >More info -0.20 >More info Lip0 mock UV seedling Original data
455 nhx5 -0.60 >More info -0.22 >More info WT Rosette leaf Original data GEO bulk
456 WT roots - Fe -0.58 >More info -0.24 >More info WT roots + Fe Roots Original data GEO bulk
457 9m.KNO3 -0.24 >More info -0.58 >More info To. KNO3 14 day old Roots Original data GEO bulk
458 Col-0-3h IAA -0.50 >More info -0.31 >More info Col-0-0h IAA whole plant Original data GEO bulk
459 prmt5-5 0.51 >More info 0.30 >More info WT Col continuous light Aerial tissue Original data GEO bulk
460 Bur-0-30min IAA -0.51 >More info -0.30 >More info Bur-0h IAA whole plant Original data GEO bulk
461 SA 3h -0.27 >More info -0.54 >More info EtOH 3h 3hr Original data GEO bulk
462 BI-1-30min IAA 0.52 >More info 0.28 >More info BI-1-0h IAA whole plant Original data GEO bulk
463 35S::CYC -0.50 >More info -0.30 >More info thaliana control secondary inflorescence Original data
464 anti-sense for AtAOX1a -0.50 >More info -0.30 >More info WT Original data GEO bulk
465 AsAKiin11 T2 -0.28 >More info -0.52 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
466 4C 7d -0.55 >More info -0.24 >More info 4C 0h Original data GEO bulk
467 xrn4-5 flower 0.65 >More info 0.14 >More info Col-0 flower inflorescence Original data GEO bulk
468 Light 3day hml 0.78 >More info 0.01 >More info 0h hml Original data
469 Glyphosate EC50 -0.54 >More info -0.25 >More info Carrier (Glyphosate) Original data GEO bulk
470 Nicotinamide-69hr -0.26 >More info -0.53 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
471 L2.5 mutant 0.57 >More info 0.22 >More info Wt Original data GEO bulk
472 rao1-1 -0.63 >More info -0.15 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
473 sdg2 -0.52 >More info -0.26 >More info wt seedling Original data GEO bulk
474 Full AC2 T1 0.28 >More info 0.50 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
475 toc1-1-77hr -0.65 >More info -0.12 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
476 ddm1 F6 inflorescence -0.62 >More info -0.15 >More info wt Col inflorescence unopened flower buds Original data
477 Protoplast Induced -0.22 >More info -0.55 >More info Uninduced Original data GEO bulk
478 16C 4hs 0.26 >More info 0.51 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
479 Nicotinamide-73hr -0.25 >More info -0.52 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
480 chito-tetramer -0.21 >More info -0.56 >More info Col Mock Original data GEO bulk
481 oas-a1.1 Cd 24h -0.51 >More info -0.25 >More info Cd 24h root Shoot Original data GEO bulk
482 WT-drought -0.58 >More info -0.18 >More info WT-control leaf Original data
483 gpa1-4/agb1-2 clean-air 3h 0.56 >More info 0.20 >More info Col clean-air 3h clean-air Original data GEO bulk
484 JMJ24-IBM1 double knockout 0.53 >More info 0.23 >More info WT Original data GEO bulk
485 Ambient CO2 LIMITING N DAY -0.68 >More info -0.08 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
486 Whole root - low pH 1H -0.20 >More info -0.56 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
487 KO-nudx19 leaves -0.58 >More info -0.17 >More info WT leaves rosette leaves Original data
488 plant (tga2-5-6) 4h phytoprostane A1 -0.50 >More info -0.25 >More info plant (tga2-5-6) 4h control Original data GEO bulk
489 Cd 24h root 0.55 >More info 0.20 >More info WT-Untreated Shoot Original data GEO bulk
490 epiF3 0.55 >More info 0.20 >More info WT Col-0 aerial part Original data
491 AsAKiin11 T1 -0.52 >More info -0.22 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
492 FOX line K16331 -0.52 >More info -0.22 >More info empty vector control (T3) FOX lines Original data GEO bulk
493 tga2 tga5 tga6 ctrl 0.67 >More info 0.07 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
494 Col whole leaf 6hpi -0.66 >More info -0.08 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
495 cat2-short-day 4d 0.64 >More info 0.10 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
496 TaFLS overexpression line (OE2) 0.56 >More info 0.17 >More info Col-0 Rosette leaves Original data
497 P. infestans 6 h (leaf) -0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
498 BLM -0.50 >More info -0.23 >More info CK BLM seedling Original data
499 HairpinZ 4 h (leaf) -0.70 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
500 dcl1-7 -0.54 >More info -0.19 >More info Ler Original data GEO bulk
501 Infected pft1 leaf -0.20 >More info -0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
502 Shoot submergence 24h -0.20 >More info -0.53 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
503 AtMYB30-ox 2-4h Xanthomonas -0.61 >More info -0.11 >More info WT 2-4h Xanthomonas Original data GEO bulk
504 Mutant cry1 (High Light) 0.53 >More info 0.19 >More info Col-0 (High Light) Original data GEO bulk
505 pap1-D -0.50 >More info -0.22 >More info Col-0 aerial part Original data
506 TaFLS overexpression line (OE1) 0.63 >More info 0.09 >More info Col-0 Rosette leaves Original data
507 cry1 high light 0.53 >More info 0.19 >More info Col-O high light Original data GEO bulk
508 bri1-116 -0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
509 Col-0 DCA 6d -0.54 >More info -0.17 >More info Col-0 MOCK 6d Original data GEO bulk
510 nhx5-1/nhx6 -0.55 >More info -0.16 >More info WT Rosette leaf Original data GEO bulk
511 pollinated pop2-1 flowers 0.52 >More info 0.19 >More info pollinated WT flowers flowers Original data GEO bulk
512 tt4 0.59 >More info 0.12 >More info WT aerial region Original data GEO bulk
513 tunicamycin 0.20 >More info 0.51 >More info DMF Original data GEO bulk
514 atmyc2 cop1 Seedling BL -0.21 >More info -0.50 >More info WT Seedling BL Original data GEO bulk
515 MYB51 OE 0.52 >More info 0.18 >More info WT for ATR1/MYB51 Original data GEO bulk
516 Mutant ag-12(flower) -0.56 >More info -0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
517 35S:RPS4 rrs1-11 2h -0.54 >More info -0.15 >More info 35S:RPS4 2h leaves Original data
518 pGL1::GL1-GR Dex 4 hours 0.11 >More info 0.58 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
519 Nicotinamide-93hr -0.18 >More info -0.51 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
520 cat2-long-day 4d 0.64 >More info 0.04 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
521 nhx5-2/nhx6 -0.54 >More info -0.13 >More info WT Rosette leaf Original data GEO bulk
522 long 14-degree- -0.69 >More info 0.03 >More info control long Original data GEO bulk
523 vte2 leaves 120h LT -0.70 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
524 SA Treated -0.73 >More info 0.08 >More info Water Original data GEO bulk
525 AtMYB30-ox 90-105 min Xanthomonas -0.55 >More info -0.10 >More info WT 90-105 min Xanthomonas Original data GEO bulk
526 LTN005-2 TSA 0.53 >More info 0.11 >More info LTN012-2 Mock Original data
527 npr1-3 MOCK 48h 0.56 >More info 0.08 >More info Col-0 MOCK 48h Original data GEO bulk
528 glk1 glk2 GLK1-GR +DEX 24h 0.50 >More info 0.14 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
529 Mutant sav3-2 (SH) -0.12 >More info -0.51 >More info Col-0 (SH) Original data GEO bulk
530 sav3-2 shade -0.12 >More info -0.51 >More info Col-0 shade seedlings Original data GEO bulk
531 sav1-1 shade -0.11 >More info -0.52 >More info Col-0 shade seedlings Original data GEO bulk
532 46T-Dry -0.13 >More info -0.50 >More info WT-Dry dehydration treatment 1h Original data
533 -Sulfate 24 h -0.08 >More info -0.54 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
534 Dark 6h hml 0.60 >More info 0.01 >More info 0h hml Original data
535 Stem wox4 0.53 >More info 0.06 >More info Stem Col first internode of stem Original data GEO bulk
536 rao1-2 -0.62 >More info 0.03 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
537 Dark 1day hml 0.57 >More info -0.01 >More info 0h hml Original data
538 Dark 2day ivd 0.56 >More info -0.01 >More info 0h ivd Original data
539 abh1 +ABA -0.52 >More info -0.03 >More info Col-0 +ABA Original data GEO bulk
540 miR396b overexpressor 0.01 >More info -0.56 >More info Col-0 vegetative apices together with the leaf primordia Original data
541 ABA JA 24h -0.02 >More info -0.52 >More info EtOH 24h 24hr Original data GEO bulk
542 toc1-1-85hr -0.53 >More info -0.00 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
543 Dark 6h wt 0.53 >More info 0.00 >More info 0h wt Original data
544 agb1 gpa1 -ABA GC 0.02 >More info 0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
545 Dark 1day ivd 0.53 >More info -0.02 >More info 0h ivd Original data
546 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
547 flu dark 8hours/30 minute light 0.09 >More info -0.59 >More info col dark 8hours/30 minute light Original data GEO bulk
548 pmr5 -0.62 >More info 0.13 >More info Col-0 rosette Original data GEO bulk
549 opr3 OPDA 0.5 h 0.07 >More info -0.54 >More info opr3 0 h Original data GEO bulk
550 RGA-GR-DEX 0.06 >More info -0.52 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
551 Dark 1day wt 0.51 >More info -0.06 >More info 0h wt Original data
552 bZIP1ko mutant N-Light- 0.59 >More info -0.15 >More info WT-sib N-Light- whole plant Original data GEO bulk
553 IAA7mII over-expressor IAA Treated -0.26 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
554 2xX6x interploidy cross 0.11 >More info -0.52 >More info 2xX2x cross Original data GEO bulk
555 Mh0 UV 0.59 >More info -0.19 >More info Mh0 mock UV seedling Original data
556 WT +Pep2 2h -0.72 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
557 long 12-degree- -0.53 >More info 0.19 >More info control long Original data GEO bulk
558 tt4 UV -0.52 >More info 0.18 >More info UV aerial region Original data GEO bulk
559 rdr6-15 -0.54 >More info 0.21 >More info Col-0 plant inflorescence Original data
560 GV3101 3hpi 0.19 >More info -0.52 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
561 GO5; harvested 8h continiously maintained in high
CO2;		 0.56 >More info -0.27 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
562 Laer pretreat GA Flg22 1h -0.45 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
563 Heat shock optimum -0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
564 seedling -S Exp 0.36 >More info -0.56 >More info seedling FN Exp seedling Original data
565 Leafminer damaged seedlings -0.65 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
566 siliques AtHb1 control -0.47 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
567 Col0-PsmES4326-24hpi -0.65 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
568 Col BTH -0.70 >More info 0.67 >More info Col rosettes Original data GEO bulk