4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on cat2-2; harvested 8h continiously maintained in high CO2;
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List of experiments correlated with "cat2-2; harvested 8h continiously maintained in high CO2;"  Help Download transcriptome of top 30
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cat2-2; harvested 8h continiously maintained in high CO2;		 Correlation to
cat2-2; harvested 8h continiously maintained in high CO2;		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 cat2-2; harvested 8h continiously maintained in
high CO2;		 1.00 >More info 1.00 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
2 GO5; harvested 8h continiously maintained in high
CO2;		 0.70 >More info 0.90 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
3 sni1 -0.48 >More info -0.82 >More info WT Original data GEO bulk
4 oas-a1.1 Cd 18h -0.50 >More info -0.79 >More info Cd 18h root Root Original data GEO bulk
5 CMV-WT -0.45 >More info -0.78 >More info Mock-At Aerial tissues Original data GEO bulk
6 camta1/3 warm -0.44 >More info -0.79 >More info WT warm entire aerial part Original data GEO bulk
7 cat2-long-day 2d 0.68 >More info 0.54 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
8 bio4-1 mutant leaves -0.36 >More info -0.85 >More info WT leaves leaves Original data GEO bulk
9 cpr5 -0.44 >More info -0.77 >More info WT seedling Original data GEO bulk
10 S58-2 -0.40 >More info -0.80 >More info wt Original data GEO bulk
11 cpr5 -0.44 >More info -0.76 >More info WT(COL) Original data GEO bulk
12 pepr1-1 Pepr2-3 +Pep2 10h 0.55 >More info 0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
13 vtc1 (II) -0.49 >More info -0.68 >More info Col (II) rosette Original data GEO bulk
14 LTN008-2 aza-dc -0.59 >More info -0.56 >More info LTN012-2 Mock Original data
15 Mutant siz1-3 -0.35 >More info -0.80 >More info Col-0 Original data GEO bulk
16 Col-0 Flg22 4h -0.40 >More info -0.75 >More info Col-0 H2O 4h Original data GEO bulk
17 camta2/3 warm -0.42 >More info -0.73 >More info WT warm entire aerial part Original data GEO bulk
18 cpr5npr1 -0.44 >More info -0.71 >More info WT(COL) Original data GEO bulk
19 siz1-3 control -0.35 >More info -0.80 >More info Col-0 control Original data GEO bulk
20 CAX1/CAX3 mutant -0.47 >More info -0.67 >More info Col whole plant Original data GEO bulk
21 bio4-1 mutant watered00µM biotin leaves 0.34 >More info 0.80 >More info bio4-1 mutant leaves leaves Original data GEO bulk
22 edr1 18 h powdery mildew -0.35 >More info -0.79 >More info Col-0 18 h powdery mildew Original data GEO bulk
23 cpr5scv1 -0.40 >More info -0.74 >More info WT(COL) Original data GEO bulk
24 A. thaliana-A. lyrata hybrid 0.39 >More info 0.75 >More info A. thaliana mature leaves before flowering Original data GEO bulk
25 pvip1 pvip2 -0.42 >More info -0.72 >More info Col-0 whole rosettes Original data GEO bulk
26 WT 2-4h Xanthomonas -0.41 >More info -0.72 >More info WT T0 Original data GEO bulk
27 Elevated CO2 AMPLE N DAY -0.30 >More info -0.83 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
28 35S::ERF104 Flg22 4h -0.42 >More info -0.70 >More info 35S::ERF104 H2O 4h Original data GEO bulk
29 OE WRKY63.3 high light -0.34 >More info -0.77 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
30 hrpA fliC 7h -0.33 >More info -0.78 >More info Mock 7h hrpA fliC Original data GEO bulk
31 Flagellin 4 h (leaf) -0.40 >More info -0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
32 efr-1 +elf18 10h 0.37 >More info 0.74 >More info WT +elf18 10h elf18 Original data GEO bulk
33 smg7b-1 -0.30 >More info -0.79 >More info WT whole plant Original data GEO bulk
34 Col-0 INA 48h -0.26 >More info -0.83 >More info Col-0 MOCK 48h Original data GEO bulk
35 cat2-hCO2 0.39 >More info 0.70 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
36 eds16 whole leaf 5dpi 0.33 >More info 0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
37 OH1 -0.35 >More info -0.73 >More info Col-0 leaves Original data GEO bulk
38 camta1/2/3 warm -0.34 >More info -0.74 >More info WT warm entire aerial part Original data GEO bulk
39 hrcC -0.33 >More info -0.74 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
40 anac017-2 AntimycinA 3h 0.43 >More info 0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
41 npr1 sni1 brca2a SA 0.49 >More info 0.58 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
42 ataf1-1 mutant Col-0 Bgh inoculated -0.35 >More info -0.71 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
43 sid2 0.28 >More info 0.78 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
44 cpr5npr1svi1 -0.35 >More info -0.71 >More info WT(COL) Original data GEO bulk
45 eds16 whole leaf 6hpi 0.29 >More info 0.76 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
46 bZIP1ko mutant N+Light- -0.28 >More info -0.77 >More info WT-sib N+Light- whole plant Original data GEO bulk
47 pepr1-1 Pepr2-3 +Pep2 2h 0.37 >More info 0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
48 E.coli TUV86 2 fliC 7h -0.31 >More info -0.74 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
49 col-5 hrpA 12h -0.31 >More info -0.74 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
50 Elevated CO2 expanding leaf -0.42 >More info -0.63 >More info Ambient CO2 expanding leaf expanding leaf Original data
51 RPL18 TuMV inoculated total RNA -0.36 >More info -0.69 >More info mock inoculated total RNA PO Original data GEO bulk
52 UV Stress 24 h (shoot) -0.21 >More info -0.83 >More info Stress mock 24 h (shoot) Original data Stress treatments
53 camta3-2 -0.27 >More info -0.77 >More info WT Original data GEO bulk
54 mpk6-ko Flg22 4h -0.33 >More info -0.71 >More info mpk6-ko H2O 4h Original data GEO bulk
55 Col whole leaf 5dpi -0.25 >More info -0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
56 pmr4-1 powdery mildew -0.44 >More info -0.60 >More info WT powdery mildew uninoculated Original data GEO bulk
57 Cor 24h -0.33 >More info -0.71 >More info Mock 24h Cor Original data GEO bulk
58 csn5 (csn5a-2 csn5b) light -0.48 >More info -0.56 >More info WT light Original data GEO bulk
59 RPL18 TuMV inoculated polysomal RNA -0.31 >More info -0.72 >More info mock inoculated polysomal RNA PO Original data GEO bulk
60 A. lyrata 0.42 >More info 0.61 >More info A. thaliana mature leaves before flowering Original data GEO bulk
61 del1-1 mutant 5d uninfected -0.24 >More info -0.79 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
62 Elevated CO2 AMPLE N NIGHT -0.21 >More info -0.82 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
63 seedlings protease IV -0.41 >More info -0.62 >More info seedlings nontreated control whole seedling Original data
64 aba3-1 -0.28 >More info -0.74 >More info wt Original data GEO bulk
65 S15-118 -0.31 >More info -0.71 >More info wt Original data GEO bulk
66 GST NPP1 4 h (leaf) -0.28 >More info -0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 Chitosan 3h Treatment -0.44 >More info -0.57 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
68 ceh1 mutant -0.22 >More info -0.79 >More info Parent line Original data
69 Phaseolicola 2 h (leaf) -0.27 >More info -0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
70 GST 4 h (leaf) -0.22 >More info -0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 mkk1/mkk2 control rep -0.28 >More info -0.72 >More info Col-0 Time 0 rep Original data GEO bulk
72 Col-0 INA 6d -0.24 >More info -0.76 >More info Col-0 MOCK 6d Original data GEO bulk
73 lht1 untreated -0.32 >More info -0.68 >More info WT untreated untreated leaf Original data GEO bulk
74 upf1 -0.36 >More info -0.64 >More info WT whole plant Original data GEO bulk
75 P.p 10.5hai -0.44 >More info -0.56 >More info At-Control roots Original data GEO bulk
76 WT +elf18 2h -0.35 >More info -0.65 >More info WT untreated elf18 Original data GEO bulk
77 SLWF infested -0.33 >More info -0.67 >More info SLWF uninfested rosette tissue Original data GEO bulk
78 csn3-1 light -0.51 >More info -0.48 >More info WT light Original data GEO bulk
79 Col whole leaf 5 dpi -0.27 >More info -0.72 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
80 Laer MeJA 1h 0.33 >More info 0.66 >More info Laer Control leaf discs Original data GEO bulk
81 upf3 -0.29 >More info -0.70 >More info WT whole plant Original data GEO bulk
82 edr1 36 h powdery mildew -0.24 >More info -0.75 >More info Col-0 36 h powdery mildew Original data GEO bulk
83 Mature callus -0.42 >More info -0.57 >More info Young callus hypocotyls Original data GEO bulk
84 Col ozone 3h -0.18 >More info -0.81 >More info Col clean-air 3h ozone Original data GEO bulk
85 +1.6 mM Tween 20 1 h. -0.25 >More info -0.74 >More info +distilled water 1 h. Original data GEO bulk
86 hrpA 7h -0.22 >More info -0.77 >More info Mock 7h hrpA Original data GEO bulk
87 Col-0 9 hpi A. brassicicola -0.31 >More info -0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
88 WT AntimycinA 3h -0.36 >More info -0.62 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
89 WT powdery mildew -0.23 >More info -0.75 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
90 WT-Dry -0.46 >More info -0.52 >More info WT-CK dehydration treatment 1h Original data
91 ein2-1 9 hpi A. brassicicola -0.37 >More info -0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
92 Elevated CO2 fully expanded leaf -0.24 >More info -0.74 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
93 Shoot -Cs -0.17 >More info -0.80 >More info Control-shoot Original data GEO bulk
94 Col whole leaf amplified 5 dpi -0.20 >More info -0.77 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
95 WT-NOCO2 INFECTED -0.24 >More info -0.73 >More info WT-MOCK Original data GEO bulk
96 camta1/2/3 24h cold -0.29 >More info -0.68 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
97 OE WRKY63.3 -0.40 >More info -0.57 >More info OE WRKY40.4 none leaf Original data GEO bulk
98 leaf blade in D -0.31 >More info -0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
99 HopZ1a treated -0.29 >More info -0.67 >More info col Original data GEO bulk
100 E.coli 0157 H7 7h -0.24 >More info -0.72 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
101 8hr-pH4.5 -0.40 >More info -0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
102 col-5 DC3000 4h -0.28 >More info -0.67 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
103 cat2-short-day 4d 0.64 >More info 0.31 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
104 DC3000 hrcC 2 h (leaf) -0.29 >More info -0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
105 Octopus overexpressor 35SDYG25 -0.33 >More info -0.62 >More info WS Original data GEO bulk
106 petiole in D -0.31 >More info -0.64 >More info petiole in WL petioles Original data GEO bulk
107 toc1-1-81hr -0.33 >More info -0.62 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
108 downy mildew cotyledons late stage -0.25 >More info -0.70 >More info mock inoculated Cotyledons Original data GEO bulk
109 leaf rlt1-1rlt2-1 0.38 >More info 0.57 >More info leaf Col-0 leaf Original data GEO bulk
110 WT+chitooctaose -0.38 >More info -0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
111 erf104-ko Flg22 4h -0.27 >More info -0.67 >More info erf104-ko H2O 4h Original data GEO bulk
112 pmr5 -0.17 >More info -0.77 >More info Col-0 Original data GEO bulk
113 AgNO3 3 h -0.31 >More info -0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
114 camta3-1 -0.25 >More info -0.69 >More info WT Original data GEO bulk
115 Col laser microdissected 5 dpi -0.25 >More info -0.69 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
116 msh1 recA3 heat shock -0.37 >More info -0.57 >More info WT heat shock above-ground parts Original data GEO bulk
117 wavy -0.29 >More info -0.65 >More info WT Original data GEO bulk
118 Col ozone 2d -0.18 >More info -0.76 >More info Col clean-air 2d ozone Original data GEO bulk
119 IRP1-OE-Fe--shoot -0.25 >More info -0.69 >More info COL-0-Fe--shoot shoot Original data
120 Infected pft1 leaf -0.26 >More info -0.67 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
121 UV -0.38 >More info -0.55 >More info WT aerial region Original data GEO bulk
122 sid2-1 cold 0.14 >More info 0.79 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
123 gh3.5D uninoculated 0.25 >More info 0.68 >More info Col-0 48 hpi Original data GEO bulk
124 mkk1/mkk2 24h BTH rep -0.34 >More info -0.59 >More info Col-0 24h BTH rep Original data GEO bulk
125 bri1-116 0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
126 eds16 whole leaf 0h UI 0.16 >More info 0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
127 anac017-1 H2O2 3h 0.36 >More info 0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
128 Cor hrpS 10h -0.26 >More info -0.66 >More info Mock 10h Cor hrpS Original data GEO bulk
129 opr3 OPDA 0.5 h -0.34 >More info -0.58 >More info opr3 0 h Original data GEO bulk
130 ARR22-ox (t-zeatin 3 h) -0.40 >More info -0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
131 35S:RPS4 eds1-2 2h 0.23 >More info 0.68 >More info 35S:RPS4 2h leaves Original data
132 E.orontii Infection 3 day -0.20 >More info -0.71 >More info Uninfection 3 day Original data Elicitor treatments
133 Laer pretreat JA Flg22 0h 0.21 >More info 0.70 >More info Laer pretreat water control leaf discs Original data GEO bulk
134 dense canopy -0.33 >More info -0.58 >More info single (control) petiole Original data GEO bulk
135 35S:RPS4 eds1-2 8h 0.22 >More info 0.69 >More info 35S:RPS4 8h leaves Original data
136 Col-0 V. longisporum-inoculated 48 hpi -0.34 >More info -0.56 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
137 P.syringae AvrRpt2 4 h (leaf) -0.24 >More info -0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
138 coi1-2 -0.22 >More info -0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
139 smg5-2 -0.24 >More info -0.66 >More info WT whole plant Original data GEO bulk
140 Mutant siz1-3 (Drought) -0.18 >More info -0.72 >More info Col-0 (Drought) Original data GEO bulk
141 pnp1-1 1wk +P -0.30 >More info -0.60 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
142 DFPM -0.30 >More info -0.60 >More info control Original data GEO bulk
143 siz1-3 drought -0.18 >More info -0.72 >More info Col-0 drought Original data GEO bulk
144 35S:RPS4 eds1-2 24h 0.19 >More info 0.71 >More info 35S:RPS4 24h leaves Original data
145 B.cinerea 18 h infection -0.10 >More info -0.79 >More info Mock 18 h Original data Botrytis cinerea infection
146 Col whole leaf 7dpi -0.11 >More info -0.78 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
147 gpa1 -ABA GC 0.28 >More info 0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
148 HopZ1a treated ulp1c ulp1d -0.25 >More info -0.64 >More info col Original data GEO bulk
149 Botrytis cinerea 18h -0.10 >More info -0.79 >More info control 18h Original data GEO bulk
150 Col-0 2HS -0.26 >More info -0.63 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
151 BLM+INA -0.32 >More info -0.56 >More info CK BLM and INA seedling Original data
152 WT +elf18 10h -0.25 >More info -0.63 >More info WT untreated elf18 Original data GEO bulk
153 S14-150 -0.21 >More info -0.67 >More info wt Original data GEO bulk
154 pmr5 pmr6 -0.09 >More info -0.79 >More info Col-0 Original data GEO bulk
155 seedlings-week-old RECA1-overexpressing
transgenic		 -0.17 >More info -0.71 >More info seedlings-week-old Col-0 seedlings Original data
156 toc1-1-65hr -0.29 >More info -0.59 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
157 Laer Flg22 2h -0.32 >More info -0.55 >More info Laer Control leaf discs Original data GEO bulk
158 eds16 whole leaf 7dpi 0.21 >More info 0.66 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
159 lht1 PstDC3000 48h -0.23 >More info -0.64 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
160 ice1 control -0.20 >More info -0.66 >More info WT control Original data GEO bulk
161 cat2-long-day 4d 0.58 >More info 0.28 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
162 coi1-16 ein2 sid2 ctrl 0.28 >More info 0.58 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
163 cs26 long day -0.16 >More info -0.70 >More info Leaves-WT-LD leaf Original data GEO bulk
164 CLO 4mM -0.11 >More info -0.75 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
165 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
166 Oxidative Stress 3 h (root) 0.34 >More info 0.51 >More info Stress mock 3 h (root) Original data Stress treatments
167 rosette leaves fdh -0.31 >More info -0.54 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
168 ice1 24H Cold -0.31 >More info -0.54 >More info WT 24H Cold Original data GEO bulk
169 rsa3-1 Na 24h -0.20 >More info -0.65 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
170 WT Col-0 Bgh inoculated -0.21 >More info -0.64 >More info WT Col-0 Un-inoculated Original data GEO bulk
171 sid2-PsmES4326-24hpi 0.30 >More info 0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
172 cs26 short-day 0.17 >More info 0.67 >More info Leaves-WT-SD leaf Original data GEO bulk
173 CMP 4hr -0.25 >More info -0.59 >More info Acetone 4hr root Original data GEO bulk
174 low CO2 + light -0.25 >More info -0.59 >More info normal CO2 + light Original data GEO bulk
175 INA -0.22 >More info -0.62 >More info CK INA seedling Original data
176 mkk2 24h BTH rep -0.27 >More info -0.56 >More info Col-0 24h BTH rep Original data GEO bulk
177 eds16 laser microdissected 5 dpi 0.33 >More info 0.50 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
178 apk1 apk2 -0.28 >More info -0.55 >More info Col0-control whole rosette Original data GEO bulk
179 IMI 4mM -0.18 >More info -0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
180 Whole root - low pH 12H -0.33 >More info -0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
181 vte2-1 3d vernalization -0.20 >More info -0.63 >More info WT 3d vernalization Original data GEO bulk
182 Col-0 DCA 48h -0.11 >More info -0.72 >More info Col-0 MOCK 48h Original data GEO bulk
183 pad4-PsmES4326-24hpi 0.26 >More info 0.56 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
184 npr1 sni1 SA -0.26 >More info -0.56 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
185 WT H2O2 3h -0.31 >More info -0.51 >More info WT water 3h 3h_H2O2 Original data GEO bulk
186 WT 90-105 min Xanthomonas -0.31 >More info -0.51 >More info WT T0 Original data GEO bulk
187 Lipopolysaccaride4 h (leaf) -0.07 >More info -0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
188 coi1-16 ein2 sid2 ozone -0.30 >More info -0.51 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
189 pad2-PsmES4326-24hpi 0.30 >More info 0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
190 Stem tissue 2 days NAA -0.25 >More info -0.56 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
191 anac017-2 H2O2 3h 0.30 >More info 0.51 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
192 col-5 hrpA 4h -0.17 >More info -0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
193 dde2-2 9 hpi A. brassicicola -0.20 >More info -0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
194 Col-0 ozone -0.27 >More info -0.53 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
195 Col-0-avrB-6h -0.17 >More info -0.63 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
196 phyB mutant 22C 10hrs 0.07 >More info 0.73 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
197 chito-tetramer -0.30 >More info -0.50 >More info Col Mock Original data GEO bulk
198 Fenclorim 4hr -0.30 >More info -0.50 >More info Acetone 4hr root Original data GEO bulk
199 GA -0.16 >More info -0.64 >More info none GA Rosette Original data GEO bulk
200 bak1-3 +Pep2 10h -0.25 >More info -0.55 >More info WT +Pep2 10h Pep2 Original data GEO bulk
201 Col-0 SA -0.19 >More info -0.61 >More info Col-0 Original data GEO bulk
202 Dex-rga(delta17) 4h GA4 0.19 >More info 0.61 >More info Vector 4h GA4 shoots Original data GEO bulk
203 CMP 24hr -0.21 >More info -0.59 >More info Acetone 24hr root Original data GEO bulk
204 K starvation (shoot) -0.20 >More info -0.59 >More info Ws (shoot) Original data GEO bulk
205 8h-DC3000 avrRpm1 -0.16 >More info -0.63 >More info 8h-DC3000 leaves Original data GEO bulk
206 myb3 myb3r4d -0.26 >More info -0.53 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
207 Shoot -K -0.20 >More info -0.59 >More info Control-shoot Original data GEO bulk
208 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.27 >More info -0.51 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
209 Nicotinamide-69hr -0.23 >More info -0.55 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
210 SA 4mM -0.17 >More info -0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
211 4C 1h -0.22 >More info -0.56 >More info 4C 0h Original data GEO bulk
212 Col-0 48 hpi -0.19 >More info -0.59 >More info Col-0 uninoculated Original data GEO bulk
213 2hr continuous KNO3 and MSX PeR cell -0.51 >More info -0.26 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
214 AvrRpm1 2 h (leaf) -0.03 >More info -0.74 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
215 Mutant NahG(leaf) 0.22 >More info 0.55 >More info Col-0 (leaf) Original data GEO bulk
216 Col whole leaf 3dpi -0.23 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
217 miR393 0h 0.20 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
218 Nicotinamide-73hr -0.18 >More info -0.59 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
219 Pto inoculated -0.21 >More info -0.56 >More info col Original data GEO bulk
220 ERF96OE -0.17 >More info -0.60 >More info WT leaf Original data
221 DC3000 2 h (leaf) -0.12 >More info -0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
222 eds16 whole leaf 7d UI 0.06 >More info 0.70 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
223 pnp1-1 3h -P -0.25 >More info -0.51 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
224 prmt5-5 0.25 >More info 0.51 >More info WT Col continuous light Aerial tissue Original data GEO bulk
225 ice1 6H Cold -0.13 >More info -0.63 >More info WT 6H Cold Original data GEO bulk
226 flu over-tAPX -0.15 >More info -0.60 >More info WT Col Original data GEO bulk
227 WT leaves - Fe -0.25 >More info -0.50 >More info WT leaves + Fe Leaves Original data GEO bulk
228 msh1 albino -0.07 >More info -0.68 >More info WT aerial part Original data GEO bulk
229 AvrRpt2 Col-0 6hpi -0.20 >More info -0.55 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
230 Cycloheximide 3 h -0.20 >More info -0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
231 Te ozone -0.21 >More info -0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
232 Light 3day wt 0.15 >More info 0.59 >More info 0h wt Original data
233 Laer pretreat GA Flg22 1h 0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
234 WT 3h -P 0.01 >More info -0.75 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
235 WT Shoot Hypoxia -0.17 >More info -0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
236 20d after anthesis -0.19 >More info -0.55 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
237 gh3.5-1D 48 hpi -0.12 >More info -0.62 >More info Col-0 uninoculated Original data GEO bulk
238 Leafminer locally damaged thaliana seedlings -0.22 >More info -0.52 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
239 aox1a:rpoTmp untreated -0.24 >More info -0.50 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
240 col-5 DC3000 12h -0.17 >More info -0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
241 Col in Pi deficiency medium -0.16 >More info -0.57 >More info Col in control medium root Original data GEO bulk
242 npr1-PsmES4326-24hpi 0.16 >More info 0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
243 Nicotinamide-93hr -0.18 >More info -0.55 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
244 rcf1-1 cold 24h -0.19 >More info -0.54 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
245 FOX line K19624 -0.17 >More info -0.55 >More info empty vector control (T3) FOX lines Original data GEO bulk
246 Stem tissue 5 days NAA -0.05 >More info -0.67 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
247 safener treated -0.17 >More info -0.55 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
248 cop1 Seedling BL -0.16 >More info -0.56 >More info WT Seedling BL Original data GEO bulk
249 long 17-degree- -0.09 >More info -0.63 >More info control long Original data GEO bulk
250 P.p 2.5hai -0.22 >More info -0.50 >More info At-Control roots Original data GEO bulk
251 vtc2 (I) -0.03 >More info -0.69 >More info Col (I) rosette Original data GEO bulk
252 abi4-102 (II) -0.17 >More info -0.54 >More info Col (II) rosette Original data GEO bulk
253 Col whole leaf 1dpi 0.21 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
254 WT-SA 0.03 >More info -0.74 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
255 pmr4-1 control -0.12 >More info -0.59 >More info WT control uninoculated Original data GEO bulk
256 sav1-1 light -0.11 >More info -0.60 >More info Col-0 light seedlings Original data GEO bulk
257 hst5 -0.16 >More info -0.54 >More info Col-0 Original data GEO bulk
258 Nicotinamide-53hr -0.09 >More info -0.61 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
259 Tsu -Fe 48h Shoots -0.19 >More info -0.51 >More info Tsu +Fe 24h Shoots Original data GEO bulk
260 Cs shoot 0.09 >More info 0.61 >More info control shoot Original data GEO bulk
261 arf2 brz 0.19 >More info 0.50 >More info arf2 mock Original data GEO bulk
262 toc1-1-49hr -0.09 >More info -0.60 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
263 R. solani AG2-1 -0.18 >More info -0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
264 CT101 ozone -0.17 >More info -0.51 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
265 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.16 >More info -0.52 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
266 pnp1-1 3h +P -0.03 >More info -0.65 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
267 Col leaves 48h LT -0.15 >More info -0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
268 flu -0.10 >More info -0.58 >More info WT Col Original data GEO bulk
269 Col-0 C2H4 24h -0.06 >More info -0.62 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
270 WT Bc inoculation 14h -0.14 >More info -0.53 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
271 Laer Alternaria 3dpi 0.11 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
272 16C 4hs 0.07 >More info 0.60 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
273 tt4 -0.10 >More info -0.57 >More info Col-0 aerial part Original data
274 CeO2 germinant 0.00 >More info 0.66 >More info Millipore Water germinant CeO2 seedling Original data
275 FarRed Light 45min 0.11 >More info 0.54 >More info White Light 45min Original data Light treatments
276 WT in -N -0.12 >More info -0.53 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
277 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
278 atgsnor1-1-avrB-6h -0.06 >More info -0.59 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
279 wrky33 Bc inoculation 14h -0.13 >More info -0.51 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
280 root - 08% oxygen - 48h -0.14 >More info -0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
281 root - 04% oxygen - 2h 0.04 >More info -0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
282 aphid saliva treated -0.14 >More info -0.50 >More info control aphid saliva treated leaves Original data GEO bulk
283 Myzus persicae saliva -0.14 >More info -0.50 >More info Control Original data GEO bulk
284 albino Ds13-2198-1 0.13 >More info 0.51 >More info control Original data GEO bulk
285 tunicamycin 0.11 >More info 0.52 >More info DMF Original data GEO bulk
286 Mock pft1 leaf -0.08 >More info -0.54 >More info Mock Col-0 leaf water leaf Original data GEO bulk
287 abi4 vtc2 (I) -0.02 >More info -0.60 >More info Col (I) rosette Original data GEO bulk
288 root - 04% oxygen - 48h -0.07 >More info -0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
289 DC3000 24h -0.07 >More info -0.53 >More info Mock 24h DC3000 Original data GEO bulk
290 rosette leaves lcr -0.09 >More info -0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
291 sid2-2 safener 0.00 >More info 0.60 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
292 PBZ -0.08 >More info -0.52 >More info none PBZ Rosette Original data GEO bulk
293 3x(m) -0.03 >More info -0.57 >More info 2x two week old seedlings Original data
294 ORS1 induced 0.02 >More info -0.61 >More info mock-induced rosette leaves Original data GEO bulk
295 Mutant ufo-1(flower) -0.05 >More info -0.53 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
296 root - 08% oxygen - 2h -0.07 >More info -0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
297 Shoot apex inflorescence (after bolting) -0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
298 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
299 MPK6 ox Shoot Hypoxia -0.01 >More info -0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
300 rcf1-1 cold 0h -0.04 >More info -0.53 >More info WT cold 0h Control seedlings Original data GEO bulk
301 SHR-GR Time 3H Dex -0.04 >More info 0.61 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
302 Starch sheath 5 days MS incubation 0.03 >More info -0.60 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
303 Aerobic prt6 0.04 >More info -0.61 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
304 Cambium 5 days NAA -0.05 >More info -0.51 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
305 A6 mutant 0.08 >More info -0.64 >More info WT rosette leaves Rosette leaves Original data GEO bulk
306 afb3-1 2h KNO3 -0.06 >More info -0.50 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
307 Cor 10h 0.06 >More info -0.62 >More info Mock 10h Cor Original data GEO bulk
308 PstDC3000 48h 0.02 >More info -0.58 >More info WT untreated 48hr leaf Original data GEO bulk
309 -Sulfate 2 h -0.01 >More info -0.54 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
310 Nicotinamide-49hr -0.05 >More info -0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
311 Constans-mutant -0.03 >More info -0.51 >More info Col control above-ground whole plant Original data GEO bulk
312 FAMA induced 4h -0.07 >More info 0.61 >More info control 4h Whole seedling Original data GEO bulk
313 edr1 0 h powdery mildew 0.01 >More info -0.55 >More info Col-0 0 h powdery mildew Original data GEO bulk
314 bHLH122 ox 0.02 >More info 0.52 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
315 atmyc2 cop1 Seedling BL -0.02 >More info -0.52 >More info WT Seedling BL Original data GEO bulk
316 Mutant sav3-2 (SH) 0.04 >More info -0.58 >More info Col-0 (SH) Original data GEO bulk
317 toc1-1-57hr 0.04 >More info -0.58 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
318 sav3-2 shade 0.04 >More info -0.58 >More info Col-0 shade seedlings Original data GEO bulk
319 PAHs stress 0.05 >More info -0.58 >More info exp control phenanthrene whole plants Original data GEO bulk
320 GRX-overexpression seedlings IAA -0.13 >More info 0.65 >More info WT seedlings IAA Seedlings Original data GEO bulk
321 Ba1 UV 0.09 >More info -0.60 >More info Ba1 mock UV seedling Original data
322 Protoplast Induced 0.08 >More info -0.58 >More info Uninduced Original data GEO bulk
323 rts1-5 0.05 >More info -0.53 >More info null-mutant whole plant Original data GEO bulk
324 WT cold 0.07 >More info -0.55 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
325 Col0-PsmES4326-24hpi -0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
326 tga1 tga4 2h KNO3 -0.09 >More info 0.55 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
327 Propiconazole 3 h 0.04 >More info -0.50 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
328 Aerobic e1 ate2 0.23 >More info -0.69 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
329 npr1-1 SA -0.08 >More info 0.52 >More info Col-0 SA complete seedling Original data
330 siliques AtHb1 control -0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
331 ckh1 CK200 0.14 >More info -0.56 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
332 abi1 hypocotyl 0.09 >More info -0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
333 root - 08% oxygen - 30min 0.16 >More info -0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
334 des1.1 0.16 >More info -0.58 >More info Leaves-WT leaf Original data GEO bulk
335 roottip hypoxia total 0.10 >More info -0.51 >More info roottip control total Original data GEO bulk
336 35S:PCO1 hypoxia -0.16 >More info 0.55 >More info WT hypoxia whole rosette Original data
337 CCA1-ox 6am non-polysomal -0.12 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
338 root - 04% oxygen - 30min 0.20 >More info -0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
339 Leafminer damaged seedlings -0.22 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
340 Col BTH -0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
341 Col0 roots 2hr KNO3 nitrogen -0.17 >More info 0.50 >More info Col0 roots 2hr KCl control root Original data GEO bulk
342 col-5 hrpA 2h 0.24 >More info -0.56 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
343 Time-0 chr11-1chr17-1 -0.24 >More info 0.52 >More info Time-0 Col-0 leaf explants Original data