4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on mkk1/mkk2 control rep
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List of experiments correlated with "mkk1/mkk2 control rep"  Help Download transcriptome of top 30
Score Experiment Correlation from
mkk1/mkk2 control rep		 Correlation to
mkk1/mkk2 control rep		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mkk1/mkk2 control rep 1.00 >More info 1.00 >More info Col-0 Time 0 rep Original data GEO bulk
2 mkk1/mkk2 24h BTH rep 0.84 >More info 0.90 >More info Col-0 24h BTH rep Original data GEO bulk
3 cpr5scv1 0.81 >More info 0.84 >More info WT(COL) Original data GEO bulk
4 OH1 0.82 >More info 0.83 >More info Col-0 leaves Original data GEO bulk
5 Col whole leaf 7dpi 0.80 >More info 0.83 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
6 bio4-1 mutant leaves 0.76 >More info 0.87 >More info WT leaves leaves Original data GEO bulk
7 CMV-WT 0.80 >More info 0.81 >More info Mock-At Aerial tissues Original data GEO bulk
8 del1-1 mutant 5d uninfected 0.75 >More info 0.86 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
9 camta1/2/3 warm 0.79 >More info 0.81 >More info WT warm entire aerial part Original data GEO bulk
10 smg7b-1 0.77 >More info 0.82 >More info WT whole plant Original data GEO bulk
11 Elevated CO2 AMPLE N DAY 0.73 >More info 0.86 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
12 cpr5npr1svi1 0.74 >More info 0.84 >More info WT(COL) Original data GEO bulk
13 pvip1 pvip2 0.78 >More info 0.80 >More info Col-0 whole rosettes Original data GEO bulk
14 S58-2 0.80 >More info 0.77 >More info wt Original data GEO bulk
15 S15-118 0.80 >More info 0.77 >More info wt Original data GEO bulk
16 Col whole leaf 5dpi 0.78 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
17 mkk2 24h BTH rep 0.75 >More info 0.81 >More info Col-0 24h BTH rep Original data GEO bulk
18 aba3-1 0.76 >More info 0.80 >More info wt Original data GEO bulk
19 cpr5 0.79 >More info 0.77 >More info WT(COL) Original data GEO bulk
20 35S:RPS4 eds1-2 24h -0.78 >More info -0.78 >More info 35S:RPS4 24h leaves Original data
21 ceh1 mutant 0.77 >More info 0.79 >More info Parent line Original data
22 UV Stress 24 h (shoot) 0.73 >More info 0.83 >More info Stress mock 24 h (shoot) Original data Stress treatments
23 cpr5 0.78 >More info 0.78 >More info WT seedling Original data GEO bulk
24 35S:RPS4 eds1-2 8h -0.76 >More info -0.80 >More info 35S:RPS4 8h leaves Original data
25 IMI 4mM 0.79 >More info 0.77 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
26 CLO 4mM 0.76 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
27 RPL18 TuMV inoculated polysomal RNA 0.79 >More info 0.76 >More info mock inoculated polysomal RNA PO Original data GEO bulk
28 cpr5npr1 0.77 >More info 0.78 >More info WT(COL) Original data GEO bulk
29 vtc2 (I) 0.78 >More info 0.77 >More info Col (I) rosette Original data GEO bulk
30 camta1/2/3 24h cold 0.76 >More info 0.79 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
31 Col-0 INA 6d 0.78 >More info 0.77 >More info Col-0 MOCK 6d Original data GEO bulk
32 RPL18 TuMV inoculated total RNA 0.79 >More info 0.76 >More info mock inoculated total RNA PO Original data GEO bulk
33 cs26 long day 0.77 >More info 0.78 >More info Leaves-WT-LD leaf Original data GEO bulk
34 ataf1-1 mutant Col-0 Bgh inoculated 0.75 >More info 0.80 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
35 Elevated CO2 AMPLE N NIGHT 0.72 >More info 0.83 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
36 camta2/3 warm 0.74 >More info 0.80 >More info WT warm entire aerial part Original data GEO bulk
37 Shoot -Cs 0.75 >More info 0.79 >More info Control-shoot Original data GEO bulk
38 camta1/3 warm 0.73 >More info 0.81 >More info WT warm entire aerial part Original data GEO bulk
39 pmr4-1 powdery mildew 0.75 >More info 0.79 >More info WT powdery mildew uninoculated Original data GEO bulk
40 edr1 18 h powdery mildew 0.75 >More info 0.79 >More info Col-0 18 h powdery mildew Original data GEO bulk
41 sid2 -0.73 >More info -0.80 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
42 pmr5 pmr6 0.76 >More info 0.77 >More info Col-0 Original data GEO bulk
43 gh3.5-1D 48 hpi 0.75 >More info 0.78 >More info Col-0 uninoculated Original data GEO bulk
44 WT-SA 0.74 >More info 0.78 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
45 camta3-2 0.72 >More info 0.79 >More info WT Original data GEO bulk
46 Col-0 INA 48h 0.71 >More info 0.80 >More info Col-0 MOCK 48h Original data GEO bulk
47 cs26 short-day -0.74 >More info -0.77 >More info Leaves-WT-SD leaf Original data GEO bulk
48 camta3-1 0.75 >More info 0.75 >More info WT Original data GEO bulk
49 eds16 whole leaf 5dpi -0.70 >More info -0.80 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
50 Mutant siz1-3 0.70 >More info 0.80 >More info Col-0 Original data GEO bulk
51 siz1-3 control 0.70 >More info 0.80 >More info Col-0 control Original data GEO bulk
52 edr1 36 h powdery mildew 0.76 >More info 0.74 >More info Col-0 36 h powdery mildew Original data GEO bulk
53 seedlings-week-old RECA1-overexpressing
transgenic		 0.74 >More info 0.76 >More info seedlings-week-old Col-0 seedlings Original data
54 abi4 vtc2 (I) 0.75 >More info 0.75 >More info Col (I) rosette Original data GEO bulk
55 SLWF infested 0.74 >More info 0.76 >More info SLWF uninfested rosette tissue Original data GEO bulk
56 mkk1 control rep 0.70 >More info 0.79 >More info Col-0 Time 0 rep Original data GEO bulk
57 efr-1 +elf18 10h -0.73 >More info -0.76 >More info WT +elf18 10h elf18 Original data GEO bulk
58 Col-0 48 hpi 0.74 >More info 0.74 >More info Col-0 uninoculated Original data GEO bulk
59 bio4-1 mutant watered00µM biotin leaves -0.64 >More info -0.83 >More info bio4-1 mutant leaves leaves Original data GEO bulk
60 Col BTH 0.79 >More info 0.67 >More info Col rosettes Original data GEO bulk
61 CAX1/CAX3 mutant 0.72 >More info 0.74 >More info Col whole plant Original data GEO bulk
62 Col ozone 2d 0.68 >More info 0.78 >More info Col clean-air 2d ozone Original data GEO bulk
63 WT powdery mildew 0.67 >More info 0.79 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
64 sid2-1 cold -0.68 >More info -0.78 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
65 sni1 0.65 >More info 0.80 >More info WT Original data GEO bulk
66 col-5 hrpA 12h 0.68 >More info 0.77 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
67 Col-0 9 hpi A. brassicicola 0.70 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
68 GST NPP1 4 h (leaf) 0.73 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
69 Mutant siz1-3 (Drought) 0.69 >More info 0.75 >More info Col-0 (Drought) Original data GEO bulk
70 siz1-3 drought 0.69 >More info 0.75 >More info Col-0 drought Original data GEO bulk
71 ein2-1 9 hpi A. brassicicola 0.71 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
72 pnp1-1 3h +P 0.72 >More info 0.71 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
73 erf104-ko Flg22 4h 0.69 >More info 0.74 >More info erf104-ko H2O 4h Original data GEO bulk
74 tt4 0.70 >More info 0.73 >More info Col-0 aerial part Original data
75 AvrRpt2 Col-0 6hpi 0.72 >More info 0.70 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
76 pad4-PsmES4326-24hpi -0.73 >More info -0.69 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
77 WT cold 0.70 >More info 0.72 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
78 coi1-16 ein2 sid2 ctrl -0.77 >More info -0.65 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
79 HopZ1a treated 0.70 >More info 0.72 >More info col Original data GEO bulk
80 msh1 albino 0.67 >More info 0.74 >More info WT aerial part Original data GEO bulk
81 Col whole leaf amplified 5 dpi 0.65 >More info 0.76 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
82 Cor 10h 0.68 >More info 0.73 >More info Mock 10h Cor Original data GEO bulk
83 PAHs stress 0.72 >More info 0.69 >More info exp control phenanthrene whole plants Original data GEO bulk
84 OE WRKY63.3 high light 0.68 >More info 0.72 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
85 hrcC 0.66 >More info 0.73 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
86 pmr5 0.65 >More info 0.74 >More info Col-0 Original data GEO bulk
87 CT101 ozone 0.76 >More info 0.62 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
88 E.coli 0157 H7 7h 0.63 >More info 0.75 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
89 anac017-2 AntimycinA 3h -0.66 >More info -0.72 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
90 Te ozone 0.76 >More info 0.62 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
91 Laer treat paclobutrazol (PAC) 0.70 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
92 CMP 24hr 0.68 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
93 wrky33 Bc inoculation 14h 0.78 >More info 0.59 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
94 AvrRpm1 2 h (leaf) 0.66 >More info 0.71 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
95 S14-150 0.71 >More info 0.66 >More info wt Original data GEO bulk
96 mil4 BTH 0.66 >More info 0.71 >More info Col BTH rosettes Original data GEO bulk
97 pepr1-1 Pepr2-3 +Pep2 2h -0.69 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
98 Cor hrpS 10h 0.70 >More info 0.67 >More info Mock 10h Cor hrpS Original data GEO bulk
99 gh3.5D uninoculated -0.66 >More info -0.71 >More info Col-0 48 hpi Original data GEO bulk
100 vtc1 (II) 0.68 >More info 0.68 >More info Col (II) rosette Original data GEO bulk
101 del1-1 5dpi 0.73 >More info 0.63 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
102 E.orontii Infection 3 day 0.63 >More info 0.73 >More info Uninfection 3 day Original data Elicitor treatments
103 WT-NOCO2 INFECTED 0.70 >More info 0.66 >More info WT-MOCK Original data GEO bulk
104 MIL4 ox BTH 0.67 >More info 0.69 >More info Col BTH Original data GEO bulk
105 pho1 0.72 >More info 0.63 >More info Col2WT Original data GEO bulk
106 WT +elf18 10h 0.68 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
107 smg5-2 0.72 >More info 0.63 >More info WT whole plant Original data GEO bulk
108 Shoot submergence 24h 0.67 >More info 0.68 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
109 Flagellin 4 h (leaf) 0.67 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
110 +1.6 mM Tween 20 1 h. 0.58 >More info 0.77 >More info +distilled water 1 h. Original data GEO bulk
111 Col ozone 3h 0.61 >More info 0.74 >More info Col clean-air 3h ozone Original data GEO bulk
112 col-5 DC3000 12h 0.62 >More info 0.73 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
113 WT Col-0 Bgh inoculated 0.59 >More info 0.76 >More info WT Col-0 Un-inoculated Original data GEO bulk
114 lht1 PstDC3000 48h 0.66 >More info 0.68 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
115 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.74 >More info 0.60 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
116 WT 3h -P 0.65 >More info 0.69 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
117 Col0-PsmES4326-24hpi 0.73 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
118 Constans-mutant 0.67 >More info 0.66 >More info Col control above-ground whole plant Original data GEO bulk
119 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.73 >More info 0.60 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
120 E.coli TUV86 2 fliC 7h 0.65 >More info 0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
121 eds16 whole leaf 7d UI -0.63 >More info -0.70 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
122 seedlings protease IV 0.65 >More info 0.68 >More info seedlings nontreated control whole seedling Original data
123 npr1-PsmES4326-24hpi -0.67 >More info -0.66 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
124 Laer Flg22 2h 0.68 >More info 0.65 >More info Laer Control leaf discs Original data GEO bulk
125 eds16 whole leaf 0h UI -0.51 >More info -0.81 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
126 35S::ERF104 Flg22 4h 0.64 >More info 0.68 >More info 35S::ERF104 H2O 4h Original data GEO bulk
127 Col-0 under 4 days salt 0.63 >More info 0.69 >More info Col-0 under control 4 days salt treatment rosette Original data
128 Col whole leaf 5 dpi 0.61 >More info 0.71 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
129 Laer pretreat GA Flg22 1h 0.60 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
130 Shoot dark control 7h 0.62 >More info 0.69 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
131 coi1-16 ein2 sid2 ozone 0.77 >More info 0.54 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
132 hrpA 7h 0.64 >More info 0.67 >More info Mock 7h hrpA Original data GEO bulk
133 Col-0 C2H4 24h 0.68 >More info 0.63 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
134 B.cinerea 18 h infection 0.61 >More info 0.70 >More info Mock 18 h Original data Botrytis cinerea infection
135 atmospheric CO2 low Mg shoot 0.74 >More info 0.57 >More info atmospheric CO2 normal Mg shoot Shoot Original data
136 Botrytis cinerea 18h 0.61 >More info 0.70 >More info control 18h Original data GEO bulk
137 wavy 0.63 >More info 0.67 >More info WT Original data GEO bulk
138 hrpA fliC 7h 0.64 >More info 0.66 >More info Mock 7h hrpA fliC Original data GEO bulk
139 Light 3day wt -0.67 >More info -0.63 >More info 0h wt Original data
140 aerial organ callus inducing medium 96 h 0.64 >More info 0.66 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
141 INA 0.58 >More info 0.72 >More info CK INA seedling Original data
142 Shoot -K 0.69 >More info 0.61 >More info Control-shoot Original data GEO bulk
143 K starvation (shoot) 0.69 >More info 0.61 >More info Ws (shoot) Original data GEO bulk
144 ice1 control 0.63 >More info 0.66 >More info WT control Original data GEO bulk
145 WT Bc inoculation 14h 0.73 >More info 0.56 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
146 ice1 6H Cold 0.62 >More info 0.67 >More info WT 6H Cold Original data GEO bulk
147 dor drought 0.56 >More info 0.73 >More info WT drought Original data GEO bulk
148 Botrytis cinerea 48h 0.63 >More info 0.66 >More info control 48h Original data GEO bulk
149 HopZ1a treated ulp1c ulp1d 0.66 >More info 0.63 >More info col Original data GEO bulk
150 mpk6-ko Flg22 4h 0.62 >More info 0.67 >More info mpk6-ko H2O 4h Original data GEO bulk
151 eds16 whole leaf 7dpi -0.57 >More info -0.72 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
152 A6 mutant 0.61 >More info 0.67 >More info WT rosette leaves Rosette leaves Original data GEO bulk
153 pepr1-1 Pepr2-3 +Pep2 10h -0.66 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
154 P.syringae AvrRpt2 4 h (leaf) 0.63 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
155 pmr4-1 control 0.62 >More info 0.66 >More info WT control uninoculated Original data GEO bulk
156 npr1-1 SA -0.65 >More info -0.62 >More info Col-0 SA complete seedling Original data
157 WT 2-4h Xanthomonas 0.57 >More info 0.70 >More info WT T0 Original data GEO bulk
158 dde2-2 9 hpi A. brassicicola 0.57 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
159 CMP 4hr 0.62 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
160 eds16 whole leaf 3dpi -0.53 >More info -0.74 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
161 Mutant gh3.5-1D (AvrRpt2) 0.56 >More info 0.71 >More info Col-0 (AvrRpt2) Original data GEO bulk
162 mkk2 control rep 0.62 >More info 0.65 >More info Col-0 Time 0 rep Original data GEO bulk
163 DFPM 0.65 >More info 0.62 >More info control Original data GEO bulk
164 petiole in D 0.58 >More info 0.69 >More info petiole in WL petioles Original data GEO bulk
165 downy mildew cotyledons late stage 0.64 >More info 0.62 >More info mock inoculated Cotyledons Original data GEO bulk
166 Laer Flg22 1h 0.65 >More info 0.60 >More info Laer Control leaf discs Original data GEO bulk
167 WT +elf18 2h 0.59 >More info 0.66 >More info WT untreated elf18 Original data GEO bulk
168 Laer Flg22+GA 2h 0.64 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
169 C24 ozone 0.75 >More info 0.50 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
170 Col-0 ozone 0.73 >More info 0.52 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
171 ERF96OE 0.56 >More info 0.69 >More info WT leaf Original data
172 aerial organ callus inducing medium 48 h 0.61 >More info 0.64 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
173 Col-0-avrB-6h 0.58 >More info 0.67 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
174 Col-Luc WT 3h antimycin A 0.63 >More info 0.62 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
175 Phaseolicola 2 h (leaf) 0.60 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
176 MYB12OX/tt4 0.59 >More info 0.65 >More info Col-0 aerial part Original data
177 npr1-3 DCA 48h 0.61 >More info 0.63 >More info npr1-3 MOCK 48h Original data GEO bulk
178 upf3 0.69 >More info 0.55 >More info WT whole plant Original data GEO bulk
179 WT flg22 2h 0.58 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
180 ORS1 induced 0.59 >More info 0.64 >More info mock-induced rosette leaves Original data GEO bulk
181 ice1 24H Cold 0.60 >More info 0.63 >More info WT 24H Cold Original data GEO bulk
182 20d after anthesis 0.66 >More info 0.57 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
183 abh1 -ABA 0.63 >More info 0.60 >More info Col-0 -ABA Original data GEO bulk
184 Cor 24h 0.56 >More info 0.67 >More info Mock 24h Cor Original data GEO bulk
185 Fenclorim 4hr 0.62 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
186 UV 0.69 >More info 0.54 >More info WT aerial region Original data GEO bulk
187 npr1 sni1 SA 0.62 >More info 0.61 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
188 Col laser microdissected 5 dpi 0.54 >More info 0.69 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
189 GST 4 h (leaf) 0.57 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
190 Heat shock optimum 0.58 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
191 shoots bhlh100/101 0uM Fe 0.65 >More info 0.57 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
192 pnp1-1 1wk -P 0.72 >More info 0.50 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
193 Stem tissue 5 days NAA 0.57 >More info 0.65 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
194 pnp1-1 1wk +P 0.62 >More info 0.60 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
195 8h-DC3000 avrRpm1 0.64 >More info 0.58 >More info 8h-DC3000 leaves Original data GEO bulk
196 flu over-tAPX 0.57 >More info 0.65 >More info WT Col Original data GEO bulk
197 aerial organ callus inducing medium 12 h 0.55 >More info 0.66 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
198 Nicotinamide-53hr 0.64 >More info 0.57 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
199 pap1-D/tt4 0.57 >More info 0.64 >More info Col-0 aerial part Original data
200 WT in -N 0.63 >More info 0.58 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
201 D2O 0.62 >More info 0.59 >More info H2O seedling Original data GEO bulk
202 LTN008-2 aza-dc 0.64 >More info 0.57 >More info LTN012-2 Mock Original data
203 Col leaves 48h LT 0.56 >More info 0.64 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
204 cat2-hCO2 -0.66 >More info -0.54 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
205 ataf1-1 mutant Col-0 Un-inoculated -0.64 >More info -0.56 >More info WT Col-0 Un-inoculated Original data GEO bulk
206 ice1 3H Cold 0.62 >More info 0.58 >More info WT 3H Cold Original data GEO bulk
207 Atss3 Light4 -0.57 >More info -0.63 >More info Atss3 Dark0.5 Original data GEO bulk
208 Shoot dark control 24h 0.57 >More info 0.63 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
209 lht1 untreated 0.59 >More info 0.61 >More info WT untreated untreated leaf Original data GEO bulk
210 irradiated leaf (cmt 1d) 0.69 >More info 0.50 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
211 mbd6 mutant thaliana 10-day-old seedling 0.59 >More info 0.60 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
212 Pto inoculated 0.62 >More info 0.57 >More info col Original data GEO bulk
213 OE WRKY63.3 0.50 >More info 0.69 >More info OE WRKY40.4 none leaf Original data GEO bulk
214 Laer Flg22+GA 1h 0.61 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
215 WT leaves - Fe 0.59 >More info 0.60 >More info WT leaves + Fe Leaves Original data GEO bulk
216 AgNO3 3 h 0.57 >More info 0.62 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
217 bZIP1ko mutant N+Light- 0.52 >More info 0.67 >More info WT-sib N+Light- whole plant Original data GEO bulk
218 WT AntimycinA 3h 0.58 >More info 0.61 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
219 IRP1-OE-Fe--shoot 0.55 >More info 0.63 >More info COL-0-Fe--shoot shoot Original data
220 Col-0 SA 0.54 >More info 0.64 >More info Col-0 Original data GEO bulk
221 MIL4 ox 0.64 >More info 0.54 >More info Col Original data GEO bulk
222 Lipopolysaccaride4 h (leaf) 0.53 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
223 rosette leaves fdh 0.60 >More info 0.58 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
224 irradiated leaf (WT 1d) 0.69 >More info 0.48 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
225 A. thaliana-A. lyrata hybrid -0.55 >More info -0.62 >More info A. thaliana mature leaves before flowering Original data GEO bulk
226 aerial organ callus inducing medium 24h 0.55 >More info 0.62 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
227 CHLM overexpression -0.59 >More info -0.58 >More info Col-0 estr green tissue Original data GEO bulk
228 oas-a1.1 Cd 18h 0.44 >More info 0.73 >More info Cd 18h root Root Original data GEO bulk
229 1 h Light IP RNA -0.55 >More info -0.61 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
230 oligomycin 4 h 0.56 >More info 0.60 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
231 OE WRKY40.4 high light 0.54 >More info 0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
232 1 h Light Total RNA -0.54 >More info -0.62 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
233 penta Alternaria 3dpi 0.63 >More info 0.53 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
234 WT NAA/flg 2h 0.59 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
235 Octopus overexpressor 35SDYG25 0.59 >More info 0.57 >More info WS Original data GEO bulk
236 abi4-102 (I) 0.62 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
237 sid2-2 safener -0.50 >More info -0.65 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
238 Elevated CO2 fully expanded leaf 0.64 >More info 0.51 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
239 mutant acs2C (single mutant) 0.58 >More info 0.57 >More info col control (single mutant) Original data GEO bulk
240 low CO2 + light 0.58 >More info 0.57 >More info normal CO2 + light Original data GEO bulk
241 Myzus persicae saliva 0.53 >More info 0.62 >More info Control Original data GEO bulk
242 vte2-1 3d vernalization 0.55 >More info 0.60 >More info WT 3d vernalization Original data GEO bulk
243 aphid saliva treated 0.53 >More info 0.62 >More info control aphid saliva treated leaves Original data GEO bulk
244 sfr3 cold 0.46 >More info 0.69 >More info WT cold All aerial tissue Original data GEO bulk
245 toc1-1-49hr 0.58 >More info 0.56 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
246 Ws 100mM NaCl 0.58 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
247 mil4 0.67 >More info 0.47 >More info Col rosettes Original data GEO bulk
248 albino Ds13-2198-1 -0.60 >More info -0.54 >More info control Original data GEO bulk
249 AFB1 flg22 2h 0.56 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
250 DC3000 2 h (leaf) 0.53 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
251 miR393 flg22 2h 0.52 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
252 Ws leaf 100mM NaCl 0.58 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
253 sid2-PsmES4326-24hpi -0.53 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
254 mkk1 24h BTH rep 0.48 >More info 0.66 >More info Col-0 24h BTH rep Original data GEO bulk
255 leaf blade in D 0.49 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
256 Leafminer locally damaged thaliana seedlings 0.57 >More info 0.57 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
257 flu 0.57 >More info 0.56 >More info WT Col Original data GEO bulk
258 Leafminer damaged seedlings 0.57 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
259 col-5 hrpA 2h 0.55 >More info 0.58 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
260 gai Control 0.59 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
261 Col-0 low oxygen 0.55 >More info 0.58 >More info Col-0 Original data GEO bulk
262 Chitosan 3h Treatment 0.58 >More info 0.55 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
263 npr1 sni1 brca2a SA -0.56 >More info -0.55 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
264 Sulfometuron EC50 0.65 >More info 0.46 >More info Carrier Original data GEO bulk
265 Fenclorim 24hr 0.53 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
266 Laer pretreat GA Flg22 0h 0.62 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
267 eds16 whole leaf 6hpi -0.50 >More info -0.61 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
268 apk1 apk2 0.61 >More info 0.50 >More info Col0-control whole rosette Original data GEO bulk
269 SA 4mM 0.75 >More info 0.36 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
270 Nicotinamide-73hr 0.57 >More info 0.54 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
271 rsa3-1 Na 24h 0.37 >More info 0.74 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
272 tumour 0.48 >More info 0.63 >More info non-tumor tumour Original data GEO bulk
273 M6PR transgenic 0mM NaCl 0.56 >More info 0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
274 cat2-2; 8h switch to ambient CO2 concentrations; 0.66 >More info 0.44 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
275 pad2-PsmES4326-24hpi -0.54 >More info -0.56 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
276 Mature callus 0.54 >More info 0.56 >More info Young callus hypocotyls Original data GEO bulk
277 35S-MIF1 light grown 0.51 >More info 0.59 >More info Light-grown WT control Original data GEO bulk
278 DC3000 hrcC 2 h (leaf) 0.48 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
279 8hr-pH4.5 0.53 >More info 0.56 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
280 anac017-1 H2O2 3h -0.54 >More info -0.55 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
281 nas4x leaves + Fe 0.67 >More info 0.42 >More info WT leaves + Fe Leaves Original data GEO bulk
282 sex1-3 0.43 >More info 0.66 >More info Col-WT leaves Original data GEO bulk
283 Dex-rga(delta17) 4h GA4+DEX -0.51 >More info -0.58 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
284 Col-0 flu HL 3h 0.51 >More info 0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
285 35:SUB1A 0.61 >More info 0.48 >More info WT whole seedling Original data GEO bulk
286 leaf blade in FRD 0.50 >More info 0.59 >More info leaf blade in WL leaf blades Original data GEO bulk
287 bak1-3 +Pep2 10h 0.61 >More info 0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
288 WT Seedling BL -0.50 >More info -0.58 >More info WT Seedling Dark Original data GEO bulk
289 toc1-1-53hr 0.61 >More info 0.47 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
290 35S::PI ap3-3 35S::AP-GR +DEX 0.44 >More info 0.64 >More info 0hr DEX Original data GEO bulk
291 Dark 3day ivd 0.53 >More info 0.54 >More info 0h ivd Original data
292 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.53 >More info Col ozone 2d ozone Original data GEO bulk
293 Dark 6h ivd 0.54 >More info 0.53 >More info 0h ivd Original data
294 Elevated CO2 expanding leaf 0.61 >More info 0.46 >More info Ambient CO2 expanding leaf expanding leaf Original data
295 P.p 30hai 0.51 >More info 0.56 >More info At-Control roots Original data GEO bulk
296 Pseudomonas 0.44 >More info 0.63 >More info Control pseudomonas treated whole seedling Original data GEO bulk
297 GO5; 8h switch to ambient CO2 concentrations; 0.44 >More info 0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
298 Laer pretreat GA Flg22 2h 0.57 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
299 SA 0.49 >More info 0.58 >More info WT mock Whole seedling Original data GEO bulk
300 GA 0.48 >More info 0.59 >More info none GA Rosette Original data GEO bulk
301 mil4 sid2 0.51 >More info 0.55 >More info Col rosettes Original data GEO bulk
302 pnp1-1 3h -P 0.52 >More info 0.54 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
303 R. solani AG8 0.54 >More info 0.52 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
304 low CO2 + dark 0.54 >More info 0.52 >More info normal CO2 + light Original data GEO bulk
305 Mutant NahG(leaf) -0.47 >More info -0.59 >More info Col-0 (leaf) Original data GEO bulk
306 sfr2 control -0.48 >More info -0.58 >More info WT control All aerial tissue Original data GEO bulk
307 WOX1-1 0.49 >More info 0.57 >More info Col-0 aerial part Original data
308 ex1ex2flu dark 8hours/30 minute light -0.68 >More info -0.37 >More info col dark 8hours/30 minute light Original data GEO bulk
309 petiole in FRD 0.52 >More info 0.53 >More info petiole in WL petioles Original data GEO bulk
310 csn5 (csn5a-2 csn5b) light 0.52 >More info 0.53 >More info WT light Original data GEO bulk
311 P.p 10.5hai 0.49 >More info 0.56 >More info At-Control roots Original data GEO bulk
312 coi1-2 0.49 >More info 0.56 >More info Col-0 mock Whole seedling Original data GEO bulk
313 DC3000 7h 0.46 >More info 0.59 >More info Mock 7h DC3000 Original data GEO bulk
314 toc1-1-77hr 0.64 >More info 0.40 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
315 WT NAA/flg 1h 0.52 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
316 WT flg22 1h 0.52 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
317 Nicotinamide-69hr 0.57 >More info 0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
318 L2.4 mutant -0.60 >More info -0.44 >More info Wt Original data GEO bulk
319 4d red light grown hmr-5 seedlings 0.55 >More info 0.49 >More info 4d red light grown WT(Col-0) seedlings Original data
320 expressing C2 MeJA -0.51 >More info -0.53 >More info LUC2T Original data GEO bulk
321 Nicotinamide-81hr 0.57 >More info 0.46 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
322 mutant acs9B (single mutant) 0.54 >More info 0.49 >More info col control (single mutant) Original data GEO bulk
323 overexpresser LBD38 in -N -0.64 >More info -0.39 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
324 myb3 myb3r4d 0.60 >More info 0.43 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
325 leaf chr11-1chr17-1 0.55 >More info 0.48 >More info leaf Col-0 leaves Original data GEO bulk
326 Col(gl) leaf 0mM NaCl 0.44 >More info 0.59 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
327 miR393 0h -0.40 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
328 Col(gl) 0mM NaCl 0.44 >More info 0.59 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
329 Primisulfuron EC50 0.54 >More info 0.48 >More info Carrier (primisulfuron) Original data GEO bulk
330 SOS1 0mM NaCl 0.56 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
331 BLM+INA 0.58 >More info 0.44 >More info CK BLM and INA seedling Original data
332 OE-HRA1 NS  0.57 >More info 0.45 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
333 tunicamycin -0.44 >More info -0.58 >More info DMF Original data GEO bulk
334 C58 35dpi 0.45 >More info 0.57 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
335 sta1 0.56 >More info 0.45 >More info WT Original data GEO bulk
336 upf1 0.63 >More info 0.38 >More info WT whole plant Original data GEO bulk
337 atgsnor1-1 -0.66 >More info -0.35 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
338 scrm-D 0.59 >More info 0.42 >More info Col-0 WT whole seedling Original data GEO bulk
339 Nicotinamide-49hr 0.58 >More info 0.43 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
340 Differentiation 12h 0.53 >More info 0.48 >More info Differentiation 0h leaves Original data
341 bHLH122 ox -0.58 >More info -0.43 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
342 WT roots - Fe 0.58 >More info 0.43 >More info WT roots + Fe Roots Original data GEO bulk
343 WT +Pep2 10h 0.52 >More info 0.49 >More info WT untreated Pep2 Original data GEO bulk
344 Seedling KUA1-IOX est 0.47 >More info 0.54 >More info Seedling KUA1-IOX mock Original data
345 Time-0 chr11-1chr17-1 -0.48 >More info -0.53 >More info Time-0 Col-0 leaf explants Original data
346 Osmotic Stress 24 h (shoot) 0.56 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
347 Laer pretreat GA+JA Flg22 0h 0.55 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
348 P.p 6hai 0.51 >More info 0.49 >More info At-Control roots Original data GEO bulk
349 seedlings +5AC 0.56 >More info 0.44 >More info control seedlings 10-day old whole seedling Original data GEO bulk
350 abi4-102 (II) 0.56 >More info 0.44 >More info Col (II) rosette Original data GEO bulk
351 Mutant coi1(leaf) -0.51 >More info -0.49 >More info Col-0 (leaf) Original data GEO bulk
352 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.72 >More info -0.28 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
353 Col-0 DCA 48h 0.25 >More info 0.75 >More info Col-0 MOCK 48h Original data GEO bulk
354 treated group 0.41 >More info 0.59 >More info Control group Original data
355 ex1 flu dark 8hours/30 minute light -0.53 >More info -0.46 >More info col dark 8hours/30 minute light Original data GEO bulk
356 Nicotinamide-93hr 0.51 >More info 0.48 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
357 col-5 DC3000-avrRpm 4h 0.45 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
358 WT light -0.49 >More info -0.50 >More info WT dark Original data GEO bulk
359 OE-HRA1 2HS  0.55 >More info 0.43 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
360 Shoot P recovery 0.65 >More info 0.33 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
361 penta Pst DC3000 12hpi 0.57 >More info 0.41 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
362 scrm-D:mute 0.59 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
363 Norflurazon 0.47 >More info 0.51 >More info Col-0 Original data GEO bulk
364 FOX line K19624 0.44 >More info 0.54 >More info empty vector control (T3) FOX lines Original data GEO bulk
365 miR393 flg22 1h 0.44 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
366 M6PR transgenic leaf 0mM NaCl 0.40 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
367 sid2-avrB-6h -0.34 >More info -0.64 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
368 Norflurazon 0.47 >More info 0.51 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
369 ape2 low light 0.47 >More info 0.51 >More info Ws-2 low light Original data GEO bulk
370 Dex-rga(delta17) 2h GA4+DEX -0.48 >More info -0.50 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
371 Day Time Treatment -0.46 >More info -0.52 >More info Day Time Control 1hr white light pulse aerial rosette Original data
372 Col-0 V. longisporum-inoculated 48 hpi 0.42 >More info 0.56 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
373 C24-3h IAA 0.54 >More info 0.43 >More info C24-0h IAA whole plant Original data GEO bulk
374 DC3000 24h 0.52 >More info 0.45 >More info Mock 24h DC3000 Original data GEO bulk
375 over-tAPX -0.46 >More info -0.51 >More info WT Col Original data GEO bulk
376 Col-0 norflurazon 0.46 >More info 0.51 >More info Col-0 control Original data GEO bulk
377 phr1 phl1 Root-Pi 0.44 >More info 0.53 >More info WT Shoot+Pi roots Original data GEO bulk
378 PBZ 0.52 >More info 0.44 >More info none PBZ Rosette Original data GEO bulk
379 safener treated 0.50 >More info 0.46 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
380 Seedling-HeatStressed TOTALmRNA 0.55 >More info 0.41 >More info Seedling-control TOTALmRNA seedling Original data
381 WT seedlings NaCl -0.42 >More info -0.54 >More info WT seedlings control Seedlings Original data GEO bulk
382 ulp1c ulp1d +Pto 0.39 >More info 0.56 >More info ulp1c ulp1d mock Original data GEO bulk
383 Cambium 5 days NAA 0.39 >More info 0.56 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
384 Whole root - low pH 12H 0.39 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
385 plant (tga2-5-6) 4h control 0.53 >More info 0.42 >More info plant (Col-0) 4h control Original data GEO bulk
386 Col-0 DCA 6d 0.58 >More info 0.37 >More info Col-0 MOCK 6d Original data GEO bulk
387 rpoTmp(line) MLD stressed 0.51 >More info 0.44 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
388 WT +Pep2 2h 0.60 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
389 Mutant tga2_5_6 0.53 >More info 0.42 >More info Col-0 Original data GEO bulk
390 Compost 0.54 >More info 0.41 >More info Perlite Compost Original data GEO bulk
391 AFB1 flg22 1h 0.45 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
392 0.125 mM gold 24 h 0.45 >More info 0.50 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
393 brm-101 0.42 >More info 0.53 >More info Ler Original data GEO bulk
394 root Dosed gold 0.45 >More info 0.50 >More info root No gold .125 mM gold 24 h roots Original data
395 penta Control 0.56 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
396 Triazolopyrimidine EC50 0.54 >More info 0.40 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
397 ASL9-ox -0.40 >More info -0.54 >More info WT aerial parts of seedlings Original data GEO bulk
398 1h light (+Lincomycin) 0.39 >More info 0.55 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
399 TNT-seedlings 0.52 >More info 0.42 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
400 Nicotinamide-57hr 0.53 >More info 0.41 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
401 Col-0 +lincomycin 0.33 >More info 0.61 >More info Col-0 -lincomycin Original data GEO bulk
402 col-5 hrpA 4h 0.35 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
403 rGRF 0.43 >More info 0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
404 12h-DC3000 avrRpm1 0.52 >More info 0.41 >More info 12h-DC3000 leaves Original data GEO bulk
405 cys-c1 leaf -0.50 >More info -0.43 >More info Leaf-WT leaves Original data GEO bulk
406 MYB12OX 0.52 >More info 0.41 >More info Col-0 aerial part Original data
407 Nicotinamide-65hr 0.52 >More info 0.41 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
408 Cycloheximide 3 h 0.43 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
409 Mutant arf2-6 -0.43 >More info -0.50 >More info Col Original data GEO bulk
410 siliques AtHb1 control 0.41 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
411 WT Red light 18h -0.41 >More info -0.52 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
412 Polysomal RNA 35S:AtCSP1-FH1 0.35 >More info 0.58 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
413 sfr6 drought -0.43 >More info -0.50 >More info WT drought All aerial tissue Original data GEO bulk
414 M6PR transgenic leaf 100mM NaCl -0.52 >More info -0.40 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
415 phyB mutant 22C 10hrs -0.26 >More info -0.66 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
416 sid2-2 mock -0.37 >More info -0.55 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
417 Laer pretreat GA+JA Flg22 1h 0.51 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
418 ABA DFPM 0.51 >More info 0.41 >More info control Original data GEO bulk
419 Col-0 Flg22 4h 0.35 >More info 0.57 >More info Col-0 H2O 4h Original data GEO bulk
420 Glyphosate EC50 0.42 >More info 0.50 >More info Carrier (Glyphosate) Original data GEO bulk
421 OE WRKY40.4 -0.51 >More info -0.40 >More info OE WRKY40.4 none leaf Original data GEO bulk
422 apum23 0.52 >More info 0.39 >More info WT (Col-3) aerial parts Original data GEO bulk
423 Seedling-HeatStressed POLYSOMESmRNA 0.52 >More info 0.39 >More info Seedling-control POLYSOMESmRNA seedling Original data
424 gpa1 -ABA GC -0.36 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
425 tt4 UV 0.26 >More info 0.65 >More info UV aerial region Original data GEO bulk
426 oxt6 mutant -0.39 >More info -0.52 >More info WT Original data GEO bulk
427 Atwrky63 -0.61 >More info -0.30 >More info Col0 none leaf Original data GEO bulk
428 L2.5 mutant -0.50 >More info -0.41 >More info Wt Original data GEO bulk
429 Tsu -Fe 24h Shoots 0.50 >More info 0.41 >More info Tsu +Fe 24h Shoots Original data GEO bulk
430 eds16 whole leaf 1dpi -0.34 >More info -0.56 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
431 nNOS-control 0.39 >More info 0.51 >More info WT-control leaf Original data
432 rcf1-1 cold 24h 0.34 >More info 0.55 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
433 Red Light 4 h 0.38 >More info 0.51 >More info White Light 4 h Original data Light treatments
434 35SAvr 0.38 >More info 0.51 >More info Ecotype Col Original data GEO bulk
435 rosette leaves lcr 0.39 >More info 0.50 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
436 3x(p) 0.35 >More info 0.54 >More info 2x two week old seedlings Original data
437 sicy-192 gun1-101 cotyledons 0.32 >More info 0.57 >More info WT cotyledons cotyledons Original data
438 rosette Light Wounded 0.35 >More info 0.53 >More info rosette Light Control Original data GEO bulk
439 rcf1-1 cold 12h 0.37 >More info 0.51 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
440 Got7 UV 0.34 >More info 0.53 >More info Got7 mock UV seedling Original data
441 des1.1 0.33 >More info 0.54 >More info Leaves-WT leaf Original data GEO bulk
442 sav1-1 light 0.51 >More info 0.36 >More info Col-0 light seedlings Original data GEO bulk
443 ani1 T0.5 -0.29 >More info -0.58 >More info WT T0.5 root tissue Original data GEO bulk
444 CeO2 germinant -0.30 >More info -0.56 >More info Millipore Water germinant CeO2 seedling Original data
445 IAA7mII over-expressor IAA Treated 0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
446 phyABCDE Rc50 -0.26 >More info -0.60 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
447 6h volatiles Sm. R3089 0.28 >More info 0.58 >More info 6h untreated whole seedling Original data GEO bulk
448 PstDC3000 48h 0.29 >More info 0.56 >More info WT untreated 48hr leaf Original data GEO bulk
449 Stem wox4 -0.34 >More info -0.51 >More info Stem Col first internode of stem Original data GEO bulk
450 SA 3h 0.21 >More info 0.64 >More info EtOH 3h 3hr Original data GEO bulk
451 camta1-2 0.28 >More info 0.57 >More info Col-0-WT Original data GEO bulk
452 npr1 0.27 >More info 0.58 >More info WT(COL) Original data GEO bulk
453 col-5 DC3000 4h 0.25 >More info 0.60 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
454 SCR-GR Time 3H Dex 0.33 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
455 Ba1 UV 0.26 >More info 0.58 >More info Ba1 mock UV seedling Original data
456 sicy-192 cotyledons 0.24 >More info 0.60 >More info WT cotyledons cotyledons Original data
457 light -0.65 >More info -0.18 >More info dark light seedling Original data GEO bulk
458 Atss3 Light1 -0.31 >More info -0.52 >More info Atss3 Dark0.5 Original data GEO bulk
459 35S:RPS4 eds1-2 2h -0.31 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
460 Ambient CO2 LIMITING N DAY 0.61 >More info 0.21 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
461 SA Treated 0.73 >More info 0.08 >More info Water Original data GEO bulk
462 35:SUB1C 0.55 >More info 0.25 >More info WT whole seedling Original data GEO bulk
463 E.orontii Infection 6 h 0.20 >More info 0.60 >More info Uninfection 6 h Original data Elicitor treatments
464 glk1 glk2 GLK1-GR +DEX 24h -0.62 >More info -0.17 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
465 Col whole leaf 1dpi -0.29 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
466 C24 UV1 -0.59 >More info -0.19 >More info C24 mock UV seedling Original data
467 Salicylic Acid 3 h 0.17 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
468 Stem tissue 2 days NAA 0.21 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
469 rosette Dark Wounded 0.26 >More info 0.51 >More info rosette Dark Control Original data GEO bulk
470 DUO1 induced 6h -0.55 >More info -0.20 >More info 6hr-not-induced whole plant Original data GEO bulk
471 calcicole ecotype Cal-0 0.55 >More info 0.19 >More info Col-4 1 mM CaCl2 Original data GEO bulk
472 35S:RPS4 rrs1-11 2h 0.50 >More info 0.24 >More info 35S:RPS4 2h leaves Original data
473 cdpk6-yfp 0.50 >More info 0.24 >More info Kan seedlings Original data GEO bulk
474 overexpresser LBD37 in -N -0.53 >More info -0.20 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
475 46T-CK 0.16 >More info 0.56 >More info WT-CK none Original data
476 0h hml 0.56 >More info 0.14 >More info 0h wt Original data
477 Shoot submergence 7h 0.69 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
478 HairpinZ 4 h (leaf) 0.72 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
479 GO5; 0h switch to ambient CO2 concentrations; -0.58 >More info -0.09 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
480 ago4-1 0.55 >More info 0.11 >More info WT La-er whole plants Original data GEO bulk
481 vte2 leaves 120h LT 0.61 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
482 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
483 Col PSTDC3000 24h 0.76 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
484 root longitudinal zone-3 pH 4.6 0.13 >More info 0.50 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
485 Laer pretreat JA Flg22 0h -0.07 >More info -0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
486 Shoot -P -0.62 >More info 0.01 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
487 phyB mutant 16C 4hrs 0.54 >More info 0.06 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
488 aux1 mutant roots ethylene 0.05 >More info 0.53 >More info roots air Original data GEO bulk
489 Lip0 UV 0.53 >More info 0.04 >More info Lip0 mock UV seedling Original data
490 FAMA induced 4h -0.04 >More info -0.50 >More info control 4h Whole seedling Original data GEO bulk
491 TaFLS overexpression line (OE1) 0.01 >More info 0.53 >More info Col-0 Rosette leaves Original data
492 P. infestans 6 h (leaf) 0.69 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
493 seedling 3h after HZE WT 0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
494 root - 08% oxygen - 2h -0.08 >More info 0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
495 AtMYB30-ox 2-4h Xanthomonas 0.51 >More info 0.01 >More info WT 2-4h Xanthomonas Original data GEO bulk
496 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
497 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
498 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
499 pvip1 pvip2 seedling 0.52 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
500 Mh0 UV -0.59 >More info 0.11 >More info Mh0 mock UV seedling Original data
501 opr3 OPDA 2 h -0.03 >More info 0.51 >More info opr3 0 h Original data GEO bulk
502 Light 3day hml -0.53 >More info 0.17 >More info 0h hml Original data