4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on sex1-3
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List of experiments correlated with "sex1-3"  Help Download transcriptome of top 30
Score Experiment Correlation from
sex1-3		 Correlation to
sex1-3		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 sex1-3 1.00 >More info 1.00 >More info Col-WT leaves Original data GEO bulk
2 low CO2 + light 0.81 >More info 0.72 >More info normal CO2 + light Original data GEO bulk
3 low CO2 + dark 0.74 >More info 0.64 >More info normal CO2 + light Original data GEO bulk
4 WT (Col) glucose -0.74 >More info -0.63 >More info WT (Col) glucose seedlings Original data GEO bulk
5 Shoot dark control 7h 0.79 >More info 0.57 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
6 Shoot dark control 24h 0.77 >More info 0.59 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
7 3x(p) 0.60 >More info 0.73 >More info 2x two week old seedlings Original data
8 spch 0.77 >More info 0.55 >More info Col-0 WT whole seedling Original data GEO bulk
9 seedling 1.5h after HZE atm-1 0.74 >More info 0.58 >More info seedling day 1 unirradiated atm-1 1.5h Original data
10 Pseudomonas 0.69 >More info 0.63 >More info Control pseudomonas treated whole seedling Original data GEO bulk
11 Col0-PsmES4326-24hpi 0.71 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
12 4d red light grown hmr-5 seedlings 0.73 >More info 0.58 >More info 4d red light grown WT(Col-0) seedlings Original data
13 Root dark control 7h 0.72 >More info 0.57 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
14 Root dark control 24h 0.69 >More info 0.58 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
15 Shoot submergence 24h 0.74 >More info 0.52 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 1 h Light Total RNA -0.71 >More info -0.55 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
17 Col-0 C2H4 24h 0.77 >More info 0.46 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
18 cngc4 0.63 >More info 0.59 >More info Ws-2 Seedlings Original data GEO bulk
19 seedling 1.5h after HZE WT 0.74 >More info 0.45 >More info seedling day 1 unirradiated WT 1.5h Original data
20 Leafminer damaged seedlings 0.62 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
21 Root submergence 24h 0.67 >More info 0.51 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
22 UV Stress 24 h (shoot) 0.55 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
23 mkk1/mkk2 24h BTH rep 0.76 >More info 0.40 >More info Col-0 24h BTH rep Original data GEO bulk
24 cpr5 0.58 >More info 0.58 >More info WT(COL) Original data GEO bulk
25 8h-DC3000 avrRpm1 0.71 >More info 0.45 >More info 8h-DC3000 leaves Original data GEO bulk
26 Nicotinamide-73hr 0.73 >More info 0.43 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
27 cpr5scv1 0.67 >More info 0.48 >More info WT(COL) Original data GEO bulk
28 detached inflorescences 24h 0.74 >More info 0.41 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
29 max3GR24 (1 uM) -0.53 >More info -0.61 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
30 Col-0 INA 6d 0.61 >More info 0.53 >More info Col-0 MOCK 6d Original data GEO bulk
31 Root submergence 7h 0.67 >More info 0.47 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
32 ptpks2 -0.57 >More info -0.57 >More info Col-WT leaves Original data GEO bulk
33 Col-0 DCA 6d 0.69 >More info 0.45 >More info Col-0 MOCK 6d Original data GEO bulk
34 Dark 2day hml 0.81 >More info 0.32 >More info 0h hml Original data
35 gai Flg22 2h 0.68 >More info 0.45 >More info Laer Flg22 2h leaf discs Original data GEO bulk
36 Col-0 under 4 days salt 0.76 >More info 0.37 >More info Col-0 under control 4 days salt treatment rosette Original data
37 Nicotinamide-93hr 0.72 >More info 0.41 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
38 TNT-seedlings 0.50 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
39 Dark 1day hml 0.77 >More info 0.35 >More info 0h hml Original data
40 tfl1-1-23ºC 0.74 >More info 0.38 >More info WT-23ºC Original data GEO bulk
41 Dark 3day hml 0.81 >More info 0.31 >More info 0h hml Original data
42 gun5 norflurazon 0.68 >More info 0.44 >More info gun5 control Original data GEO bulk
43 Col whole leaf 5dpi 0.60 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
44 +1.6 mM Tween 20 1 h. 0.46 >More info 0.66 >More info +distilled water 1 h. Original data GEO bulk
45 Dark 1day ivd 0.74 >More info 0.37 >More info 0h ivd Original data
46 Dark 6h ivd 0.74 >More info 0.37 >More info 0h ivd Original data
47 IMI 4mM 0.64 >More info 0.47 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
48 M6PR transgenic 0mM NaCl 0.56 >More info 0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
49 E.orontii Infection 3 day 0.47 >More info 0.63 >More info Uninfection 3 day Original data Elicitor treatments
50 Nicotinamide-49hr 0.69 >More info 0.41 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
51 tt4 0.69 >More info 0.41 >More info Col-0 aerial part Original data
52 Nicotinamide-53hr 0.64 >More info 0.45 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
53 Dark 3day wt 0.80 >More info 0.29 >More info 0h wt Original data
54 mkk1/mkk2 control rep 0.66 >More info 0.43 >More info Col-0 Time 0 rep Original data GEO bulk
55 Col whole leaf 3dpi 0.53 >More info 0.56 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
56 Col BTH 0.42 >More info 0.67 >More info Col rosettes Original data GEO bulk
57 pepr1-1 Pepr2-3 +Pep2 10h -0.64 >More info -0.44 >More info WT +Pep2 10h Pep2 Original data GEO bulk
58 gun4-1 0.58 >More info 0.50 >More info WT Col-0 seedling Original data GEO bulk
59 CAX1/CAX3 mutant 0.51 >More info 0.57 >More info Col whole plant Original data GEO bulk
60 camta1/2/3 warm 0.63 >More info 0.45 >More info WT warm entire aerial part Original data GEO bulk
61 Nicotinamide-65hr 0.69 >More info 0.39 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
62 Dark 1day wt 0.76 >More info 0.32 >More info 0h wt Original data
63 Laer pretreat GA Flg22 1h 0.37 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
64 camta1/3 warm 0.47 >More info 0.61 >More info WT warm entire aerial part Original data GEO bulk
65 Dark 3day ivd 0.80 >More info 0.27 >More info 0h ivd Original data
66 WT AntimycinA 3h 0.66 >More info 0.41 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
67 CMV-WT 0.60 >More info 0.47 >More info Mock-At Aerial tissues Original data GEO bulk
68 leaf blade in D 0.58 >More info 0.49 >More info leaf blade in WL leaf blades Original data GEO bulk
69 edr1 18 h powdery mildew 0.49 >More info 0.58 >More info Col-0 18 h powdery mildew Original data GEO bulk
70 coi1-2 0.53 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
71 roots bhlh100/101 0uM Fe 0.53 >More info 0.53 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
72 HSP90 Reduced RNAi-B1 0.53 >More info 0.53 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
73 hai1-2 low water potential 0.61 >More info 0.44 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
74 CMP 4hr 0.61 >More info 0.44 >More info Acetone 4hr root Original data GEO bulk
75 RPL18 TuMV inoculated total RNA 0.65 >More info 0.40 >More info mock inoculated total RNA PO Original data GEO bulk
76 0h light (+Lincomycin) -0.66 >More info -0.39 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
77 Dark 2day wt 0.78 >More info 0.27 >More info 0h wt Original data
78 Dark 6h wt 0.76 >More info 0.29 >More info 0h wt Original data
79 pmr5 pmr6 0.49 >More info 0.56 >More info Col-0 Original data GEO bulk
80 WT (Col-0) inflorescence drought day 5 0.69 >More info 0.35 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
81 sfr6 drought -0.50 >More info -0.54 >More info WT drought All aerial tissue Original data GEO bulk
82 Nicotinamide-69hr 0.71 >More info 0.33 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
83 M6PR transgenic leaf 0mM NaCl 0.51 >More info 0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
84 Myzus persicae saliva 0.54 >More info 0.49 >More info Control Original data GEO bulk
85 aphid saliva treated 0.54 >More info 0.49 >More info control aphid saliva treated leaves Original data GEO bulk
86 Dark 6h hml 0.74 >More info 0.29 >More info 0h hml Original data
87 pip3 At2g19270 TDNA 9 0.39 >More info 0.64 >More info Col-0 whole plant Original data GEO bulk
88 1 h Light IP RNA -0.64 >More info -0.38 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
89 gun1-9 norflurazon 0.66 >More info 0.36 >More info gun1-9 control Original data GEO bulk
90 hog1-7 -0.57 >More info -0.45 >More info wt whole seedling Original data GEO bulk
91 mutant-line774 -0.57 >More info -0.45 >More info WT-control whole plant Original data GEO bulk
92 Whole root - S 3H -0.47 >More info -0.55 >More info Whole root - S 0H Original data GEO bulk
93 oligomycin 4 h 0.67 >More info 0.34 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
94 high-R:FR bud axillary -0.60 >More info -0.41 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
95 cpr5npr1 0.59 >More info 0.42 >More info WT(COL) Original data GEO bulk
96 pap1-D/tt4 0.67 >More info 0.34 >More info Col-0 aerial part Original data
97 35S:RPS4 eds1-2 24h -0.65 >More info -0.36 >More info 35S:RPS4 24h leaves Original data
98 edr1 36 h powdery mildew 0.64 >More info 0.37 >More info Col-0 36 h powdery mildew Original data GEO bulk
99 FLIGHT TAGESB plate6 SHOOTS 0.51 >More info 0.50 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
100 COL-0-Fe--shoot -0.50 >More info -0.51 >More info COL-0-Ctrl--shoot shoot Original data
101 6h volatiles Sm. R3089 0.28 >More info 0.73 >More info 6h untreated whole seedling Original data GEO bulk
102 3x(m) 0.25 >More info 0.76 >More info 2x two week old seedlings Original data
103 mil4 sid2 0.64 >More info 0.36 >More info Col rosettes Original data GEO bulk
104 gh3.5-1D 48 hpi 0.56 >More info 0.44 >More info Col-0 uninoculated Original data GEO bulk
105 Fenclorim 4hr 0.64 >More info 0.36 >More info Acetone 4hr root Original data GEO bulk
106 HSP90 Reduced RNAi-A2 0.53 >More info 0.47 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
107 CLO 4mM 0.60 >More info 0.39 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
108 vte1-1 3d vernalization -0.58 >More info -0.41 >More info WT 3d vernalization Original data GEO bulk
109 SOS1 0mM NaCl 0.57 >More info 0.42 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
110 ceh1 mutant 0.60 >More info 0.39 >More info Parent line Original data
111 Nicotinamide-89hr 0.64 >More info 0.35 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
112 Nicotinamide-57hr 0.57 >More info 0.42 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
113 anti-sense for AtAOX1a 0.34 >More info 0.65 >More info WT Original data GEO bulk
114 tfl1-1-16ºC 0.54 >More info 0.44 >More info WT-16ºC Original data GEO bulk
115 seedlings-week-old RECA1-overexpressing
transgenic		 0.53 >More info 0.45 >More info seedlings-week-old Col-0 seedlings Original data
116 Ws 100mM NaCl 0.57 >More info 0.40 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
117 Ws leaf 100mM NaCl 0.57 >More info 0.40 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
118 camta1/2/3 24h cold 0.61 >More info 0.36 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
119 CMP 24hr 0.69 >More info 0.28 >More info Acetone 24hr root Original data GEO bulk
120 4h decapitation -0.32 >More info -0.65 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
121 Heat shock optimum 0.32 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
122 INA 0.35 >More info 0.62 >More info CK INA seedling Original data
123 Col-0 48 hpi 0.50 >More info 0.46 >More info Col-0 uninoculated Original data GEO bulk
124 vtc2-1 -0.46 >More info -0.50 >More info Col-0 whole plant Original data GEO bulk
125 Osmotic Stress 24 h (shoot) 0.59 >More info 0.36 >More info Stress mock 24 h (shoot) Original data Stress treatments
126 gai Flg22 1h 0.60 >More info 0.35 >More info Laer Flg22 1h leaf discs Original data GEO bulk
127 Day Time Treatment -0.56 >More info -0.38 >More info Day Time Control 1hr white light pulse aerial rosette Original data
128 npr1 sni1 ssn2 -0.50 >More info -0.44 >More info npr1 sni1 water water seedling Original data GEO bulk
129 MYB12OX/tt4 0.65 >More info 0.29 >More info Col-0 aerial part Original data
130 Uniconazole 12 h 0.57 >More info 0.37 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
131 bak1-3 +Pep2 10h 0.56 >More info 0.37 >More info WT +Pep2 10h Pep2 Original data GEO bulk
132 Lipopolysaccaride4 h (leaf) 0.55 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
133 35S::HRE2 Aerobic 0.60 >More info 0.33 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
134 A. thaliana-A. lyrata hybrid -0.51 >More info -0.42 >More info A. thaliana mature leaves before flowering Original data GEO bulk
135 9 hr Hypoxia Total RNA 0.57 >More info 0.36 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
136 A2hsfa1-ox in quadruple mutant -0.55 >More info -0.37 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
137 pepr1-1 Pepr2-3 +Pep2 2h -0.53 >More info -0.39 >More info WT +Pep2 2h Pep2 Original data GEO bulk
138 E.orontii Infection 6 h 0.39 >More info 0.53 >More info Uninfection 6 h Original data Elicitor treatments
139 Nicotinamide-81hr 0.60 >More info 0.32 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
140 Chitosan 3h Treatment 0.62 >More info 0.30 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
141 Osmotic Stress 24 h (root) 0.59 >More info 0.33 >More info Stress mock 24 h (root) Original data Stress treatments
142 msh1 stunt 0.55 >More info 0.36 >More info WT Col-0 above ground part of plant Original data GEO bulk
143 35S::MBF1c 0.53 >More info 0.38 >More info control Original data GEO bulk
144 exo70A1 0.68 >More info 0.23 >More info Col-0 whole plant Original data GEO bulk
145 gai Control 0.63 >More info 0.28 >More info Laer Control leaf discs Original data GEO bulk
146 SA 4mM 0.52 >More info 0.39 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
147 A. halleri control-leaf 0.37 >More info 0.54 >More info A. petraea control-leaf Original data GEO bulk
148 2 hr Hypoxia Total RNA 0.58 >More info 0.33 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
149 mutant-line1135 -0.50 >More info -0.41 >More info WT-control whole plant Original data GEO bulk
150 til1-1 22C 0.57 >More info 0.34 >More info Col-0 22C Original data GEO bulk
151 ddm1-12 -0.50 >More info -0.41 >More info wt whole seedling Original data GEO bulk
152 Col-0 0h NAA 0.55 >More info 0.35 >More info Col-0 6h MOCK Original data GEO bulk
153 del1-1 5dpi 0.50 >More info 0.40 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
154 AgNO3 3 h 0.52 >More info 0.38 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
155 WT (Col-0) inflorescence drought day 4 0.54 >More info 0.36 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
156 atmospheric CO2 low Mg shoot 0.60 >More info 0.30 >More info atmospheric CO2 normal Mg shoot Shoot Original data
157 GST NPP1 4 h (leaf) 0.64 >More info 0.25 >More info Mock 4 h (leaf) Original data Elicitor treatments
158 seedling 24h after Gamma WT -0.53 >More info -0.36 >More info seedling day 2 unirradiated WT 24h Original data
159 flu dark 8hours/30 minute light 0.66 >More info 0.23 >More info col dark 8hours/30 minute light Original data GEO bulk
160 ced1 -0.61 >More info -0.28 >More info WT PEG 6hr seedlings Original data GEO bulk
161 pGL1::GL1-GR Dex 24hours 0.69 >More info 0.20 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
162 Nicotinamide-85hr 0.55 >More info 0.33 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
163 rpoTmp(line) MLD stressed 0.55 >More info 0.33 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
164 cpr5npr1svi1 0.54 >More info 0.34 >More info WT(COL) Original data GEO bulk
165 OsRLCK253 expressing -0.52 >More info -0.36 >More info WT seedlings Original data GEO bulk
166 HSP90 Reduced RNAi-A3 0.50 >More info 0.38 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
167 Octopus overexpressor 35SDYG25 0.51 >More info 0.37 >More info WS Original data GEO bulk
168 npr1 sni1 brca2a SA -0.51 >More info -0.37 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
169 35S:RPS4 eds1-2 8h -0.67 >More info -0.21 >More info 35S:RPS4 8h leaves Original data
170 siliques AtHb1 control 0.36 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
171 amiRAP aerobic -0.26 >More info -0.62 >More info WT aerobic aerobic Original data GEO bulk
172 S15-118 0.31 >More info 0.57 >More info wt Original data GEO bulk
173 RPL18 TuMV inoculated polysomal RNA 0.54 >More info 0.33 >More info mock inoculated polysomal RNA PO Original data GEO bulk
174 sid2-1 cold -0.51 >More info -0.36 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
175 elf3-7-16ºC -0.60 >More info -0.27 >More info WT-16ºC Original data GEO bulk
176 aox1a(line) MLD stressed 0.57 >More info 0.30 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
177 9 hr Hypoxia 1 hr recovery Total RNA 0.53 >More info 0.33 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
178 petiole in D 0.54 >More info 0.32 >More info petiole in WL petioles Original data GEO bulk
179 Seedling-HeatStressed TOTALmRNA 0.67 >More info 0.19 >More info Seedling-control TOTALmRNA seedling Original data
180 Phytoprostane A1 4 h 0.54 >More info 0.31 >More info Col-0 Original data GEO bulk
181 camta1 leaf water 0.55 >More info 0.30 >More info Col-0 leaf water leaf Original data GEO bulk
182 pvip1 pvip2 0.53 >More info 0.32 >More info Col-0 whole rosettes Original data GEO bulk
183 sni1 0.32 >More info 0.53 >More info WT Original data GEO bulk
184 ALC Toc1 light-light EtOH 0.50 >More info 0.35 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
185 WOX1-1 0.61 >More info 0.24 >More info Col-0 aerial part Original data
186 seedling 24h after Gamma atm-1 -0.53 >More info -0.31 >More info seedling day 2 unirradiated atm-1 24h Original data
187 ddm1-2 -0.51 >More info -0.33 >More info Col-0 plant inflorescence Original data
188 ga1-3 scl3-1 -0.61 >More info -0.23 >More info ga1-3 whole root Original data
189 WT hypoxia 0.60 >More info 0.24 >More info WT normoxia whole rosette Original data
190 WT-16ºC -0.58 >More info -0.26 >More info WT-23ºC Original data GEO bulk
191 Col-0 low oxygen 0.51 >More info 0.32 >More info Col-0 control low oxygen root Original data GEO bulk
192 CMV-A2b mutant 0.51 >More info 0.32 >More info Mock-At Aerial tissues Original data GEO bulk
193 GST 4 h (leaf) 0.52 >More info 0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
194 pmr5 0.27 >More info 0.56 >More info Col-0 Original data GEO bulk
195 nbp35-3/- 0.60 >More info 0.23 >More info WT whole seedling Original data GEO bulk
196 safener treated 0.59 >More info 0.24 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
197 Col-0 2HS 0.51 >More info 0.31 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
198 sfr3 cold 0.51 >More info 0.31 >More info WT cold All aerial tissue Original data GEO bulk
199 gun1gun5 drak pretreated 0.55 >More info 0.27 >More info WT drak pretreated Original data GEO bulk
200 OsSAP11 expressing -0.50 >More info -0.32 >More info WT seedlings Original data GEO bulk
201 glk1 glk2 GLK1-GR +DEX 4h 0.51 >More info 0.31 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
202 elf3-7-23ºC -0.55 >More info -0.27 >More info WT-23ºC Original data GEO bulk
203 Nicotinamide-77hr 0.60 >More info 0.22 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
204 mil4 BTH 0.61 >More info 0.21 >More info Col BTH rosettes Original data GEO bulk
205 root cells cortex 140mM NaCl 1 hour 0.51 >More info 0.30 >More info root cells cortex standard 1 hour root cells cortex Original data
206 pif4pif5 mut 1h FR -0.62 >More info -0.19 >More info WT 1h FR Original data GEO bulk
207 gpa1-4/agb1-2 ozone 2d -0.50 >More info -0.31 >More info Col ozone 2d ozone Original data GEO bulk
208 sid2 0.58 >More info 0.23 >More info Col rosettes Original data GEO bulk
209 Leafminer locally damaged thaliana seedlings 0.62 >More info 0.18 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
210 Nicotinamide-61hr 0.53 >More info 0.27 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
211 det2 light-dark 0.50 >More info 0.30 >More info det2 light light-dark Original data GEO bulk
212 Elevated CO2 AMPLE N DAY 0.29 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
213 phyABDE Rc50 -0.57 >More info -0.23 >More info phyABDE Dark red light whole seedling Original data GEO bulk
214 Heat 2 days recovery 0.59 >More info 0.21 >More info Mock 2 days recovery seedling Original data GEO bulk
215 ABA DFPM 0.58 >More info 0.22 >More info control Original data GEO bulk
216 sfr2 control -0.69 >More info -0.11 >More info WT control All aerial tissue Original data GEO bulk
217 root Dosed gold 0.51 >More info 0.28 >More info root No gold .125 mM gold 24 h roots Original data
218 Dark 2day ivd 0.80 >More info -0.01 >More info 0h ivd Original data
219 3d old, both 10mM sucrose and 0.2µM SMX -0.50 >More info -0.29 >More info control Whole seedling Original data GEO bulk
220 MIL4 ox 0.56 >More info 0.23 >More info Col Original data GEO bulk
221 Laer treat paclobutrazol (PAC) 0.65 >More info 0.14 >More info Laer Control leaf discs Original data GEO bulk
222 0.125 mM gold 24 h 0.51 >More info 0.28 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
223 Col-0 INA 48h 0.28 >More info 0.51 >More info Col-0 MOCK 48h Original data GEO bulk
224 Fenclorim 24hr 0.54 >More info 0.24 >More info Acetone 24hr root Original data GEO bulk
225 WT Bc inoculation 14h 0.54 >More info 0.24 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
226 12h-DC3000 avrRpm1 0.53 >More info 0.25 >More info 12h-DC3000 leaves Original data GEO bulk
227 WT mitomycin C -0.59 >More info -0.19 >More info WT mock shoot apical meristem Original data
228 17 0h total -0.51 >More info -0.27 >More info 27 0h total whole seedlings floating on MS medium Original data
229 Col-0 flu HL 3h 0.59 >More info 0.19 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
230 CHLM overexpression -0.51 >More info -0.27 >More info Col-0 estr green tissue Original data GEO bulk
231 dTLEc control 0.23 >More info 0.55 >More info wt control leaves Original data GEO bulk
232 BLM+INA 0.28 >More info 0.50 >More info CK BLM and INA seedling Original data
233 pif1-2 dark 0.57 >More info 0.21 >More info Wt dark Original data GEO bulk
234 Mutant pif1-2 (Dark etiol) 0.57 >More info 0.21 >More info Col-0 (Dark etiol) Original data GEO bulk
235 AvrRpm1 2 h (leaf) 0.51 >More info 0.26 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
236 ga1-3/brm-1 -0.55 >More info -0.22 >More info wt shoots Original data GEO bulk
237 scrm-D 0.53 >More info 0.24 >More info Col-0 WT whole seedling Original data GEO bulk
238 anac017-2 AntimycinA 3h -0.61 >More info -0.16 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
239 seedling 3h after HZE WT 0.75 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
240 lib -0.53 >More info -0.24 >More info WT whole seedling Original data GEO bulk
241 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.15 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
242 arp6-10 2h 27 -degree-C -0.59 >More info -0.17 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
243 Shoot submergence 7h 0.76 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
244 mil4 0.50 >More info 0.26 >More info Col rosettes Original data GEO bulk
245 hen1 -0.60 >More info -0.16 >More info Ler Original data GEO bulk
246 Seedling-HeatStressed POLYSOMESmRNA 0.68 >More info 0.08 >More info Seedling-control POLYSOMESmRNA seedling Original data
247 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.57 >More info 0.18 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
248 Atss3 Light4 -0.52 >More info -0.23 >More info Atss3 Dark0.5 Original data GEO bulk
249 shoots bhlh100/101 0uM Fe 0.53 >More info 0.22 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
250 Full AC2 T1 -0.53 >More info -0.22 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
251 Col leaf 100mM NaCl 0.56 >More info 0.19 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
252 Col leaf 100mM NaCl 0.56 >More info 0.19 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
253 Col 100mM NaCl 0.56 >More info 0.19 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
254 light -0.57 >More info -0.18 >More info dark light seedling Original data GEO bulk
255 sfr6 control -0.75 >More info 0.00 >More info WT control All aerial tissue Original data GEO bulk
256 ADD3 -0.54 >More info -0.20 >More info WT aerial part Original data GEO bulk
257 pad4-PsmES4326-24hpi -0.60 >More info -0.14 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
258 dor drought 0.51 >More info 0.23 >More info WT drought Original data GEO bulk
259 Col-0 ozone 0.57 >More info 0.17 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
260 Dark 4 h pls UV-AB 5min -0.61 >More info -0.13 >More info Dark 4 h Original data Light treatments
261 Salt Stress 24 h (root) 0.57 >More info 0.17 >More info Stress mock 24 h (root) Original data Stress treatments
262 WT (Col-0) inflorescence drought day 10 0.63 >More info 0.10 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
263 iron minus 0 h 0.58 >More info 0.15 >More info iron +0 h root Original data GEO bulk
264 ALC Toc1 light-dark EtOH -0.59 >More info -0.14 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
265 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.59 >More info 0.14 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
266 AAF-OX 0.57 >More info 0.16 >More info Col-0 Rosette leaf Original data GEO bulk
267 axr2-BR -0.53 >More info -0.20 >More info BR BR dark-grown seedlings Original data GEO bulk
268 GST-overexpression seedlings control 0.52 >More info 0.21 >More info WT seedlings control Seedlings Original data
269 aphid infested 0.14 >More info 0.59 >More info control aphid infested Leaves Original data GEO bulk
270 aphid infested 0.14 >More info 0.59 >More info CTR Original data GEO bulk
271 penta Control 0.56 >More info 0.16 >More info Laer Control leaf discs Original data GEO bulk
272 npr1 sni1 SA 0.54 >More info 0.18 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
273 phyB mutant 16C 4hrs 0.72 >More info -0.00 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
274 rosettes WT drought 0.62 >More info 0.09 >More info rosettes WT watered Original data GEO bulk
275 efr-1 +elf18 10h -0.56 >More info -0.14 >More info WT +elf18 10h elf18 Original data GEO bulk
276 A. lyrata -0.14 >More info -0.56 >More info A. thaliana mature leaves before flowering Original data GEO bulk
277 seedlings protease IV 0.52 >More info 0.18 >More info seedlings nontreated control whole seedling Original data
278 pap1-D 0.58 >More info 0.12 >More info Col-0 aerial part Original data
279 wrky33 Bc inoculation 14h 0.55 >More info 0.14 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
280 Col-0 9 hpi A. brassicicola 0.56 >More info 0.13 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
281 scrm-D:mute 0.52 >More info 0.17 >More info Col-0 WT whole seedling Original data GEO bulk
282 hrpA fliC 7h 0.58 >More info 0.11 >More info Mock 7h hrpA fliC Original data GEO bulk
283 Flagellin 4 h (leaf) 0.55 >More info 0.13 >More info Mock 4 h (leaf) Original data Elicitor treatments
284 Anoxia 0.55 >More info 0.13 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
285 8 hr ammonium 0.55 >More info 0.13 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
286 P.syringae vir 4 h (leaf) 0.12 >More info 0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
287 pnp1-1 3h +P 0.50 >More info 0.18 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
288 shoot hypoxia pRBCS 0.18 >More info 0.50 >More info shoot hypoxia total Original data GEO bulk
289 Leaf 0.09 >More info 0.59 >More info Control for tissue data leaf Original data GEO bulk
290 Botrytis cinerea 48h 0.53 >More info 0.14 >More info control 48h Original data GEO bulk
291 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
292 OE-HRA1 NS  0.54 >More info 0.13 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
293 coi1-16 ein2 sid2 ozone 0.56 >More info 0.11 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
294 RRE1 Chitin 0.54 >More info 0.12 >More info Chitin Original data GEO bulk
295 petiole in FRD 0.50 >More info 0.16 >More info petiole in WL petioles Original data GEO bulk
296 Te ozone 0.51 >More info 0.15 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
297 rosettes myoox drought 0.56 >More info 0.09 >More info rosettes myoox watered Original data GEO bulk
298 Heat and anoxia 0.54 >More info 0.11 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
299 WT zebularine -0.51 >More info -0.14 >More info WT mock shoot apical meristem Original data
300 Dark 4 h pls UV-A 5 min -0.60 >More info -0.05 >More info Dark 4 h Original data Light treatments
301 pnp1-1 3h -P 0.55 >More info 0.10 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
302 shl-2 Pool 0.50 >More info 0.15 >More info Ler Pool seedling Original data GEO bulk
303 coi1-16 ein2 sid2 ctrl -0.53 >More info -0.12 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
304 Full C2 T2 0.62 >More info 0.02 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
305 frb1 mutant 0.59 >More info 0.05 >More info WT whole seedling Original data GEO bulk
306 SA Treated 0.56 >More info 0.08 >More info Water Original data GEO bulk
307 Leafminer systemically damaged thaliana seedlings 0.54 >More info 0.10 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
308 Var2-1 roots 2hr KNO3 nitrogen 0.50 >More info 0.14 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
309 flu 0.57 >More info 0.07 >More info WT Col Original data GEO bulk
310 CT101 ozone 0.56 >More info 0.07 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
311 Laer pretreat JA Flg22 0h -0.02 >More info -0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
312 C2 leaf-drought 0.58 >More info 0.04 >More info C2 leaf-well watered Original data GEO bulk
313 hrpA 7h 0.52 >More info 0.10 >More info Mock 7h hrpA Original data GEO bulk
314 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
315 rcf1-1 cold 24h 0.56 >More info 0.05 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
316 root - 01% oxygen - 2h 0.55 >More info 0.06 >More info root - 21% oxygen - 2h Original data GEO bulk
317 short 17-degree- -0.07 >More info -0.54 >More info control short Original data GEO bulk
318 HairpinZ 4 h (leaf) 0.64 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
319 HopZ1a treated ulp1c ulp1d 0.50 >More info 0.11 >More info col Original data GEO bulk
320 col-5 hrpA 12h 0.60 >More info 0.01 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
321 Col-Luc WT 3h antimycin A 0.53 >More info 0.08 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
322 bZIP1ko mutant N-Light- 0.55 >More info 0.05 >More info WT-sib N-Light- whole plant Original data GEO bulk
323 HSP90 Reduced RNAi-A1 0.56 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
324 Genotoxic Stress 3 h (shoot) -0.55 >More info -0.05 >More info Stress mock 3 h (shoot) Original data Stress treatments
325 Dark 4 h pls RedLight 1min -0.60 >More info 0.00 >More info Dark 4 h Original data Light treatments
326 MIL4 ox BTH 0.52 >More info 0.08 >More info Col BTH Original data GEO bulk
327 dyt1 -0.56 >More info -0.03 >More info WT anther Original data GEO bulk
328 cpr5 sim smr1 0.56 >More info 0.03 >More info WT seedling Original data GEO bulk
329 Col-0 norflurazon 0.51 >More info 0.08 >More info Col-0 control Original data GEO bulk
330 gul2-1 bri1-5 mutant 0.50 >More info 0.09 >More info WT 7 day-old whole seedlings Original data
331 WT light -0.59 >More info -0.00 >More info WT dark Original data GEO bulk
332 shoot hypoxia p35S 0.06 >More info 0.52 >More info shoot hypoxia total Original data GEO bulk
333 sfr3 cold 0.51 >More info 0.06 >More info WT-cold aerial tissues Original data GEO bulk
334 cdm1 mutant floral young floral buds -0.50 >More info -0.07 >More info WT floral yound floral buds Unopen flower buds Original data
335 ulp1c ulp1d +Pto 0.55 >More info 0.02 >More info ulp1c ulp1d mock Original data GEO bulk
336 pGL3::GL3-GR Dex 24hours 0.50 >More info 0.07 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
337 flu over-tAPX 0.50 >More info 0.07 >More info WT Col Original data GEO bulk
338 Imbibed 1 h (seed) 0.05 >More info 0.52 >More info Dry seed Original data Time course of early seed germination
339 Senescing leaf 0.02 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
340 Sepals stage15 0.02 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
341 erf104-ko Flg22 4h 0.52 >More info 0.04 >More info erf104-ko H2O 4h Original data GEO bulk
342 bri1-116 -0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
343 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
344 glk1 glk2 GLK1-GR +DEX 24h -0.53 >More info -0.02 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
345 Imbibed 24 h ABA 30uM (seed) 0.52 >More info 0.02 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
346 erf104-ko H2O 4h -0.61 >More info 0.07 >More info Col-0 H2O 4h Original data GEO bulk
347 Leaf systemic -0.54 >More info 0.01 >More info Leaf control vegetative leaf Original data GEO bulk
348 col-5 DC3000 12h 0.64 >More info -0.12 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
349 gpa1 -ABA LF 0.55 >More info -0.04 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
350 SLWF infested 0.54 >More info -0.03 >More info SLWF uninfested rosette tissue Original data GEO bulk
351 aerial organ callus inducing medium 12 h 0.51 >More info -0.01 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
352 rdr6-15 -0.63 >More info 0.13 >More info Col-0 plant inflorescence Original data
353 sdg2 -0.51 >More info 0.01 >More info wt seedling Original data GEO bulk
354 4d red light grown hmr-22 seedlings 0.71 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
355 median nectary stage 14-15 0.00 >More info 0.50 >More info Control for tissue data median nectaries Original data GEO bulk
356 DC3000 2 h (leaf) 0.52 >More info -0.03 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
357 lateral nectary stage 14-15 -0.01 >More info 0.50 >More info Control for tissue data lateral nectaries Original data GEO bulk
358 E.coli TUV86 2 fliC 7h 0.53 >More info -0.05 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
359 ARF10 -0.55 >More info 0.08 >More info Col-0 Original data GEO bulk
360 aerial organ callus inducing medium 48 h 0.50 >More info -0.03 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
361 seed germinating in countinuous light 24h SL -0.21 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
362 P.p 10.5hai 0.52 >More info -0.06 >More info At-Control roots Original data GEO bulk
363 Fei-0-3h IAA 0.50 >More info -0.04 >More info Fei-0-0h IAA whole plant Original data GEO bulk
364 afb3-1 2h KNO3 -0.12 >More info 0.58 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
365 Shoot apex inflorescence (after bolting) -0.22 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
366 opr3 OPDA 0.5 h -0.10 >More info 0.53 >More info opr3 0 h Original data GEO bulk
367 P. infestans 6 h (leaf) 0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
368 agb1 gpa1 -ABA LF 0.50 >More info -0.10 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
369 Cauline leaves -0.14 >More info 0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
370 DC3000 7h 0.54 >More info -0.15 >More info Mock 7h DC3000 Original data GEO bulk
371 Mutant sav3-2 (SH) -0.18 >More info 0.55 >More info Col-0 (SH) Original data GEO bulk
372 sav3-2 shade -0.18 >More info 0.55 >More info Col-0 shade seedlings Original data GEO bulk
373 phyABCDE Rc50 -0.53 >More info 0.17 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
374 Oxidative Stress 3 h (shoot) -0.59 >More info 0.24 >More info Stress mock 3 h (shoot) Original data Stress treatments
375 E.coli 0157 H7 7h 0.52 >More info -0.18 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
376 aerial organ callus inducing medium 96 h 0.50 >More info -0.18 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
377 CCA1-ox 6am non-polysomal -0.19 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
378 hsfa1 quadruple mutant 0.50 >More info -0.27 >More info WT (Col-0) whole seedling Original data GEO bulk
379 WT Atum 1h -0.28 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
380 Rosette leaf No2 -0.29 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
381 NahG 0.50 >More info -0.67 >More info Col-0 Leaves Original data GEO bulk
382 Imbibed 24 h ABA 3uM (seed) 0.38 >More info -0.51 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
383 leaf -0.51 >More info 0.44 >More info Control for tissue data leaf Original data GEO bulk
384 ML (Mature leaves) 35DAS -0.51 >More info 0.45 >More info Control for tissue data Original data GEO bulk
385 Ambient CO2 expanding leaf -0.50 >More info 0.44 >More info Control for tissue data expanding leaf Original data