4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on aerial organ callus inducing medium 12 h
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Score Experiment Correlation from
aerial organ callus inducing medium 12 h		 Correlation to
aerial organ callus inducing medium 12 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 aerial organ callus inducing medium 12 h 1.00 >More info 1.00 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
2 aerial organ callus inducing medium 24h 0.90 >More info 0.90 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
3 aerial organ callus inducing medium 48 h 0.88 >More info 0.85 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
4 aerial organ callus inducing medium 96 h 0.85 >More info 0.81 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
5 Shoot dark control 7h 0.73 >More info 0.76 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
6 WT Red light 18h -0.74 >More info -0.74 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
7 cpr5npr1svi1 0.72 >More info 0.74 >More info WT(COL) Original data GEO bulk
8 IAA 3 h 0.73 >More info 0.73 >More info Mock 3 h Original data Basic hormone treatment of seedlings
9 rosette leaves fdh 0.69 >More info 0.75 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
10 tt4 0.73 >More info 0.70 >More info Col-0 aerial part Original data
11 Light 4h steady-state -0.68 >More info -0.74 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
12 Col-0 9 hpi A. brassicicola 0.67 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
13 Light 4h polysome-bound -0.67 >More info -0.74 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
14 Shoot submergence 24h 0.67 >More info 0.72 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
15 cpr5scv1 0.73 >More info 0.64 >More info WT(COL) Original data GEO bulk
16 col-5 hrpA 12h 0.66 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
17 sfr2 control -0.65 >More info -0.72 >More info WT control All aerial tissue Original data GEO bulk
18 D2O 0.68 >More info 0.68 >More info H2O seedling Original data GEO bulk
19 35S::PI ap3-3 35S::AP-GR +DEX 0.61 >More info 0.75 >More info 0hr DEX Original data GEO bulk
20 C24-3h IAA 0.76 >More info 0.60 >More info C24-0h IAA whole plant Original data GEO bulk
21 Leafminer locally damaged thaliana seedlings 0.74 >More info 0.61 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
22 Dark 6h ivd 0.72 >More info 0.63 >More info 0h ivd Original data
23 MIL4 ox BTH 0.71 >More info 0.63 >More info Col BTH Original data GEO bulk
24 Atss3 Light4 -0.67 >More info -0.66 >More info Atss3 Dark0.5 Original data GEO bulk
25 mil4 BTH 0.70 >More info 0.63 >More info Col BTH rosettes Original data GEO bulk
26 MYB12OX/tt4 0.67 >More info 0.66 >More info Col-0 aerial part Original data
27 toc1-1-77hr 0.69 >More info 0.63 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
28 WT hypoxia 0.62 >More info 0.69 >More info WT normoxia whole rosette Original data
29 petiole in FRD 0.68 >More info 0.63 >More info petiole in WL petioles Original data GEO bulk
30 Col-0 C2H4 24h 0.64 >More info 0.67 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
31 phyAphyB Dark 0.67 >More info 0.64 >More info phyB Dark Original data GEO bulk
32 Leafminer damaged seedlings 0.74 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
33 cpr5npr1 0.68 >More info 0.62 >More info WT(COL) Original data GEO bulk
34 vtc2 (I) 0.66 >More info 0.64 >More info Col (I) rosette Original data GEO bulk
35 Botrytis cinerea 48h 0.66 >More info 0.64 >More info control 48h Original data GEO bulk
36 Nicotinamide-69hr 0.62 >More info 0.68 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
37 Col-0 low oxygen 0.68 >More info 0.62 >More info Col-0 Original data GEO bulk
38 phyB Dark -0.66 >More info -0.64 >More info WT(Ler) Dark Original data GEO bulk
39 abi4 vtc2 (I) 0.68 >More info 0.62 >More info Col (I) rosette Original data GEO bulk
40 Shoot dark control 24h 0.61 >More info 0.69 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
41 ceh1 mutant 0.72 >More info 0.58 >More info Parent line Original data
42 low R/FR JA spray 0.60 >More info 0.69 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
43 pap1-D/tt4 0.68 >More info 0.61 >More info Col-0 aerial part Original data
44 Heat shock optimum 0.64 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
45 Sulfometuron EC50 0.64 >More info 0.65 >More info Carrier Original data GEO bulk
46 WT Seedling BL -0.63 >More info -0.65 >More info WT Seedling Dark Original data GEO bulk
47 Atss3 Light1 -0.58 >More info -0.70 >More info Atss3 Dark0.5 Original data GEO bulk
48 Dark 3day ivd 0.72 >More info 0.55 >More info 0h ivd Original data
49 08h Col-0 0.58 >More info 0.69 >More info 00h Col-0 Original data GEO bulk
50 mkk1/mkk2 24h BTH rep 0.65 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
51 Nicotinamide-73hr 0.60 >More info 0.67 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
52 mkk2 24h BTH rep 0.61 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
53 pip3 At2g19270 RNAi 24 -0.61 >More info -0.65 >More info Nd-1 whole plant Original data GEO bulk
54 WT +elf18 10h 0.70 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
55 edr1 36 h powdery mildew 0.61 >More info 0.65 >More info Col-0 36 h powdery mildew Original data GEO bulk
56 col-5 DC3000 12h 0.62 >More info 0.64 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
57 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.64 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
58 msh1 albino 0.65 >More info 0.60 >More info WT aerial part Original data GEO bulk
59 Red Light 4 h 0.51 >More info 0.74 >More info White Light 4 h Original data Light treatments
60 MIL4 ox 0.66 >More info 0.59 >More info Col Original data GEO bulk
61 rosette leaves lcr 0.62 >More info 0.63 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
62 Chemically 0.56 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
63 Laer pretreat GA Flg22 1h 0.53 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
64 dde2-2 9 hpi A. brassicicola 0.58 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
65 Rsch 3d 0.57 >More info 0.67 >More info Rsch CA Leaves Original data
66 hrpA fliC 7h 0.58 >More info 0.66 >More info Mock 7h hrpA fliC Original data GEO bulk
67 16h Col-0 0.52 >More info 0.72 >More info 00h Col-0 Original data GEO bulk
68 Nicotinamide-49hr 0.58 >More info 0.65 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
69 seedling 6h after HZE atm-1 0.53 >More info 0.70 >More info seedling day 1 unirradiated atm-1 6h Original data
70 Flagellin 4 h (leaf) 0.62 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 +1.6 mM Tween 20 1 h. 0.54 >More info 0.69 >More info +distilled water 1 h. Original data GEO bulk
72 Fei-0-3h IAA 0.68 >More info 0.55 >More info Fei-0-0h IAA whole plant Original data GEO bulk
73 Col0-PsmES4326-24hpi 0.62 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
74 eto1-4 +393 -0.53 >More info -0.70 >More info eto1-4 whole seedling Original data GEO bulk
75 Col-0 +lincomycin 0.54 >More info 0.68 >More info Col-0 -lincomycin Original data GEO bulk
76 E.coli TUV86 2 fliC 7h 0.58 >More info 0.64 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
77 E.coli 0157 H7 7h 0.50 >More info 0.72 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
78 GST NPP1 4 h (leaf) 0.63 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
79 vte2-1 3d vernalization 0.65 >More info 0.57 >More info WT 3d vernalization Original data GEO bulk
80 Te 1d 0.60 >More info 0.62 >More info Te CA Leaves Original data
81 Leaf GLU1-KO 0.63 >More info 0.58 >More info Leaf Col(0) rosette leaves Original data GEO bulk
82 ERF96OE 0.59 >More info 0.62 >More info WT leaf Original data
83 mkk1/mkk2 control rep 0.66 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
84 Aerobic e1 ate2 0.59 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
85 SA 4mM 0.51 >More info 0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
86 eto1-4 0.54 >More info 0.67 >More info Col-0 whole seedling Original data GEO bulk
87 2d dark-grown WT(Col-0)/1 hr red light -0.56 >More info -0.64 >More info 2d dark-grown WT seedling Original data GEO bulk
88 Dark 3day wt 0.65 >More info 0.55 >More info 0h wt Original data
89 NAA -AA 0.58 >More info 0.62 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
90 hrcC 0.62 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
91 Col-0-3h IAA 0.72 >More info 0.48 >More info Col-0-0h IAA whole plant Original data GEO bulk
92 sid2-2 9 hpi A. brassicicola 0.58 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
93 Dark 4 h pls RedLight 1min -0.52 >More info -0.67 >More info Dark 4 h Original data Light treatments
94 Col(gl) 0mM NaCl 0.59 >More info 0.60 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
95 rcf1-1 cold 24h 0.53 >More info 0.66 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
96 Nicotinamide-93hr 0.58 >More info 0.61 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
97 seedlings protease IV 0.65 >More info 0.54 >More info seedlings nontreated control whole seedling Original data
98 Dark 3day hml 0.64 >More info 0.55 >More info 0h hml Original data
99 seedling 1.5h after HZE atm-1 0.62 >More info 0.57 >More info seedling day 1 unirradiated atm-1 1.5h Original data
100 gh3.5-1D 48 hpi 0.66 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
101 Col(gl) leaf 0mM NaCl 0.59 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
102 Dark 2day hml 0.67 >More info 0.52 >More info 0h hml Original data
103 petiole in D 0.61 >More info 0.58 >More info petiole in WL petioles Original data GEO bulk
104 Dark 2day wt 0.66 >More info 0.53 >More info 0h wt Original data
105 mbd6 mutant thaliana 10-day-old seedling 0.64 >More info 0.54 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
106 Cold Stress 24 h (shoot) 0.55 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
107 WT +Pep2 10h 0.62 >More info 0.56 >More info WT untreated Pep2 Original data GEO bulk
108 GST 4 h (leaf) 0.52 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
109 pepr1-1 Pepr2-3 +Pep2 2h -0.59 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
110 seedlings-week-old RECA1-overexpressing
transgenic		 0.59 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
111 ein2-1 9 hpi A. brassicicola 0.56 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
112 Elevated CO2 AMPLE N DAY 0.59 >More info 0.58 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
113 Dark 6h wt 0.67 >More info 0.50 >More info 0h wt Original data
114 Seedling KUA1-IOX est 0.48 >More info 0.69 >More info Seedling KUA1-IOX mock Original data
115 abi4-102 (I) 0.56 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
116 Ws 100mM NaCl 0.60 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
117 Ws leaf 100mM NaCl 0.60 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
118 Col-0-avrB-6h 0.52 >More info 0.64 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
119 fls1-3 0.58 >More info 0.58 >More info Col-0 Rosette leaves Original data
120 hrpA 7h 0.58 >More info 0.58 >More info Mock 7h hrpA Original data GEO bulk
121 Col whole leaf 5dpi 0.57 >More info 0.59 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
122 Bur-0-3h IAA 0.68 >More info 0.47 >More info Bur-0h IAA whole plant Original data GEO bulk
123 tumour 0.54 >More info 0.61 >More info non-tumor tumour Original data GEO bulk
124 Laer treat paclobutrazol (PAC) 0.63 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
125 ein2-1 24hpi A. brassicicola -0.52 >More info -0.63 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
126 4d red light grown hmr-5 seedlings 0.63 >More info 0.52 >More info 4d red light grown WT(Col-0) seedlings Original data
127 flu over-tAPX 0.62 >More info 0.53 >More info WT Col Original data GEO bulk
128 AVG 3 h -0.47 >More info -0.68 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
129 ein2-1 +Pep2 2h -0.52 >More info -0.62 >More info WT +Pep2 2h Pep2 Original data GEO bulk
130 WT Na2S -0.54 >More info -0.60 >More info WT water Na2S leaf Original data GEO bulk
131 PRR5-VP 12h light on -0.61 >More info -0.53 >More info WT 12h light on whole plant Original data GEO bulk
132 Col whole leaf 7dpi 0.56 >More info 0.58 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
133 Aerobic prt6 0.59 >More info 0.55 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
134 ACC 3 h 0.52 >More info 0.62 >More info Mock 3 h Original data Basic hormone treatment of seedlings
135 Dark 6h hml 0.64 >More info 0.50 >More info 0h hml Original data
136 Cor hrpS 10h 0.56 >More info 0.58 >More info Mock 10h Cor hrpS Original data GEO bulk
137 HopZ1a treated 0.57 >More info 0.57 >More info col Original data GEO bulk
138 Nicotinamide-53hr 0.46 >More info 0.67 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
139 seedling 12h after Gamma atm-1 0.46 >More info 0.67 >More info seedling day 1 unirradiated atm-1 12h Original data
140 Osmotic Stress 24 h (shoot) 0.60 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
141 WT +elf18 2h 0.62 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
142 AvrRpt2 Col-0 6hpi 0.65 >More info 0.48 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
143 piffq FR 3h -0.52 >More info -0.61 >More info WT FR 3h whole seedling Original data GEO bulk
144 RPL18 TuMV inoculated total RNA 0.64 >More info 0.49 >More info mock inoculated total RNA PO Original data GEO bulk
145 Col 3d 0.55 >More info 0.58 >More info Col CA Leaves Original data
146 WT light -0.55 >More info -0.58 >More info WT dark Original data GEO bulk
147 mpk6-ko Flg22 4h 0.53 >More info 0.60 >More info mpk6-ko H2O 4h Original data GEO bulk
148 Leafminer systemically damaged thaliana seedlings 0.64 >More info 0.49 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
149 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.61 >More info -0.52 >More info 2d dark-grown WT seedling Original data GEO bulk
150 low R/FR mock spray 0.47 >More info 0.66 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
151 WT Bc inoculation 14h 0.67 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
152 WT(Ler) Rc15 -0.56 >More info -0.56 >More info WT(Ler) Dark Original data GEO bulk
153 pnp1-1 3h +P 0.58 >More info 0.54 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
154 WT Col-0 Bgh inoculated 0.52 >More info 0.60 >More info WT Col-0 Un-inoculated Original data GEO bulk
155 tunicamycin -0.48 >More info -0.64 >More info DMF Original data GEO bulk
156 Col-0 INA 6d 0.65 >More info 0.46 >More info Col-0 MOCK 6d Original data GEO bulk
157 Lipopolysaccaride4 h (leaf) 0.55 >More info 0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
158 Elevated CO2 AMPLE N NIGHT 0.53 >More info 0.58 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
159 scrm-D 0.59 >More info 0.52 >More info Col-0 WT whole seedling Original data GEO bulk
160 WT cold 0.51 >More info 0.60 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
161 Col-0 48 hpi 0.61 >More info 0.50 >More info Col-0 uninoculated Original data GEO bulk
162 Differentiation 12h 0.54 >More info 0.57 >More info Differentiation 0h leaves Original data
163 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.69 >More info 0.42 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
164 pvip1 pvip2 0.54 >More info 0.57 >More info Col-0 whole rosettes Original data GEO bulk
165 WT(Ler) Rc50 -0.57 >More info -0.54 >More info WT(Ler) Dark Original data GEO bulk
166 leaf blade in FRD 0.51 >More info 0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
167 mil4 sid2 0.57 >More info 0.53 >More info Col rosettes Original data GEO bulk
168 CT101 ozone 0.65 >More info 0.45 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
169 npr1 0.51 >More info 0.59 >More info WT(COL) Original data GEO bulk
170 CMV-WT 0.52 >More info 0.58 >More info Mock-At Aerial tissues Original data GEO bulk
171 seedling 6h after HZE WT 0.57 >More info 0.53 >More info seedling day 1 unirradiated WT 6h Original data
172 mutant acs9B (single mutant) 0.63 >More info 0.47 >More info col control (single mutant) Original data GEO bulk
173 seedling 1.5h after HZE WT 0.59 >More info 0.51 >More info seedling day 1 unirradiated WT 1.5h Original data
174 NahG 0.52 >More info 0.58 >More info Col-0 Leaves Original data GEO bulk
175 gpa1 -ABA LF 0.51 >More info 0.59 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
176 HopZ1a treated ulp1c ulp1d 0.55 >More info 0.55 >More info col Original data GEO bulk
177 1 h Light Total RNA -0.57 >More info -0.53 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
178 35S::ERF104 Flg22 4h 0.52 >More info 0.58 >More info 35S::ERF104 H2O 4h Original data GEO bulk
179 edr1 18 h powdery mildew 0.53 >More info 0.57 >More info Col-0 18 h powdery mildew Original data GEO bulk
180 cat2-2; 8h switch to ambient CO2 concentrations; 0.34 >More info 0.76 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
181 cca1-lhy 30m light 0.41 >More info 0.69 >More info 30m light whole seedlings Original data GEO bulk
182 Red/FR Light 4 h 0.51 >More info 0.58 >More info FarRed Light 4 h Original data Light treatments
183 cpr5 0.60 >More info 0.49 >More info WT(COL) Original data GEO bulk
184 essp3/brm5 mutant -0.59 >More info -0.50 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
185 Pseudomonas 0.57 >More info 0.52 >More info Control pseudomonas treated whole seedling Original data GEO bulk
186 WT 3h -P 0.49 >More info 0.60 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
187 1 h Light IP RNA -0.57 >More info -0.51 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
188 Primisulfuron EC50 0.50 >More info 0.58 >More info Carrier (primisulfuron) Original data GEO bulk
189 flu 0.57 >More info 0.51 >More info WT Col Original data GEO bulk
190 DC3000 2 h (leaf) 0.52 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
191 efr-1 +elf18 10h -0.52 >More info -0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
192 AgNO3 3 h 0.57 >More info 0.51 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
193 coi1-16 ein2 sid2 ctrl -0.67 >More info -0.41 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
194 R. solani AG8 0.59 >More info 0.49 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
195 M6PR transgenic leaf 0mM NaCl 0.58 >More info 0.50 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
196 seedling 12h after Gamma WT 0.45 >More info 0.63 >More info seedling day 1 unirradiated WT 12h Original data
197 Phaseolicola 2 h (leaf) 0.55 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
198 DC3000 7h 0.53 >More info 0.54 >More info Mock 7h DC3000 Original data GEO bulk
199 wrky33 Bc inoculation 14h 0.65 >More info 0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
200 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.67 >More info 0.40 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
201 ice1 24H Cold 0.56 >More info 0.51 >More info WT 24H Cold Original data GEO bulk
202 M6PR transgenic 0mM NaCl 0.64 >More info 0.43 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
203 Te ozone 0.67 >More info 0.40 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
204 35SpBVR3 0.55 >More info 0.52 >More info WT Original data GEO bulk
205 vte2 leaves 48h LT 0.53 >More info 0.54 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
206 Dark 1day ivd 0.57 >More info 0.50 >More info 0h ivd Original data
207 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.47 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
208 rpl24 total 0.63 >More info 0.43 >More info WT total seedling shoot/aerial seedling Original data
209 Col leaf 100mM NaCl 0.62 >More info 0.44 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
210 eif3h 0.62 >More info 0.44 >More info WT Original data GEO bulk
211 Col leaf 100mM NaCl 0.62 >More info 0.44 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
212 Col 100mM NaCl 0.62 >More info 0.44 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
213 TaFLS overexpression line (OE2) 0.52 >More info 0.54 >More info Col-0 Rosette leaves Original data
214 Col-0 ozone 0.67 >More info 0.39 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
215 Col-0 norflurazon 0.51 >More info 0.55 >More info Col-0 control Original data GEO bulk
216 WT Rc50 -0.56 >More info -0.50 >More info WT Dark red light whole seedling Original data GEO bulk
217 mkk2 control rep 0.57 >More info 0.49 >More info Col-0 Time 0 rep Original data GEO bulk
218 B.cinerea 18 h infection 0.58 >More info 0.48 >More info Mock 18 h Original data Botrytis cinerea infection
219 Botrytis cinerea 18h 0.58 >More info 0.48 >More info control 18h Original data GEO bulk
220 Col BTH 0.39 >More info 0.67 >More info Col rosettes Original data GEO bulk
221 SOS1 0mM NaCl 0.66 >More info 0.39 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
222 dde2-2 24hpi A. brassicicola -0.51 >More info -0.54 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
223 Col-0 under 4 days salt 0.54 >More info 0.50 >More info Col-0 under control 4 days salt treatment rosette Original data
224 WT NAA/flg 2h 0.54 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
225 ice1 6H Cold 0.55 >More info 0.49 >More info WT 6H Cold Original data GEO bulk
226 S58-2 0.57 >More info 0.47 >More info wt Original data GEO bulk
227 gun1gun5 far-red pretreated -0.56 >More info -0.48 >More info WT far-red pretreated Original data GEO bulk
228 IMI 4mM 0.50 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
229 Stem tissue 5 days NAA 0.45 >More info 0.59 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
230 ani1 T0.5 -0.35 >More info -0.69 >More info WT T0.5 root tissue Original data GEO bulk
231 Wt-BA-sample 0.48 >More info 0.56 >More info Wt-dmso-sample seedling Original data
232 Dark 1day hml 0.55 >More info 0.48 >More info 0h hml Original data
233 Day Time Treatment -0.54 >More info -0.49 >More info Day Time Control 1hr white light pulse aerial rosette Original data
234 BI-1-3h IAA 0.62 >More info 0.41 >More info BI-1-0h IAA whole plant Original data GEO bulk
235 anac017-2 AntimycinA 3h -0.51 >More info -0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
236 Drought Stress 24 h (shoot) 0.62 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
237 CabpBVR2 0.56 >More info 0.47 >More info WT Original data GEO bulk
238 Laer Flg22 2h 0.59 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
239 Laer pretreat GA+JA Flg22 2h 0.57 >More info 0.46 >More info Laer pretreat water control leaf discs Original data GEO bulk
240 Laer pretreat JA Flg22 2h 0.62 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
241 Dark 4 h pls UV-A 5 min -0.45 >More info -0.58 >More info Dark 4 h Original data Light treatments
242 pif4pif5 mut dark -0.42 >More info -0.61 >More info WT dark Original data GEO bulk
243 8h-DC3000 avrRpm1 0.46 >More info 0.57 >More info 8h-DC3000 leaves Original data GEO bulk
244 DFPM 0.48 >More info 0.55 >More info control Original data GEO bulk
245 WOX1-1 0.54 >More info 0.48 >More info Col-0 aerial part Original data
246 eif3h polysome 0.55 >More info 0.47 >More info WT polysome Original data GEO bulk
247 C58 35dpi 0.52 >More info 0.50 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
248 ced1 -0.59 >More info -0.43 >More info WT PEG 6hr seedlings Original data GEO bulk
249 UV Stress 24 h (shoot) 0.49 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
250 pip3 At2g19270 RNAi 32 -0.49 >More info -0.53 >More info Nd-1 whole plant Original data GEO bulk
251 WT Red light 1h -0.34 >More info -0.68 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
252 seedling 6h after Gamma atm-1 0.49 >More info 0.53 >More info seedling day 1 unirradiated atm-1 6h Original data
253 L2.5 mutant -0.55 >More info -0.46 >More info Wt Original data GEO bulk
254 wavy 0.58 >More info 0.43 >More info WT Original data GEO bulk
255 Dex-rga(delta17) 4h GA4+DEX -0.53 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
256 35S:RPS4 eds1-2 24h -0.54 >More info -0.47 >More info 35S:RPS4 24h leaves Original data
257 erf104-ko Flg22 4h 0.52 >More info 0.49 >More info erf104-ko H2O 4h Original data GEO bulk
258 Dark 1day wt 0.54 >More info 0.47 >More info 0h wt Original data
259 Col whole leaf 5 dpi 0.46 >More info 0.55 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
260 seedling 12h after HZE atm-1 0.39 >More info 0.62 >More info seedling day 1 unirradiated atm-1 12h Original data
261 AFB1 flg22 2h 0.52 >More info 0.48 >More info WT 0h Leaf tissue Original data GEO bulk
262 Pto inoculated 0.50 >More info 0.50 >More info col Original data GEO bulk
263 C24 ozone 0.61 >More info 0.39 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
264 rosette leaves bdg 0.47 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
265 pif4pif5 mut 24h FR -0.38 >More info -0.62 >More info WT 24h FR Original data GEO bulk
266 miR393 flg22 2h 0.47 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
267 eto1-4 +370 -0.47 >More info -0.53 >More info eto1-4 whole seedling Original data GEO bulk
268 Stem tissue 2 days NAA 0.29 >More info 0.71 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
269 1h light (+Lincomycin) 0.48 >More info 0.52 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
270 Triazolopyrimidine EC50 0.43 >More info 0.57 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
271 Glyphosate EC50 0.43 >More info 0.57 >More info Carrier (Glyphosate) Original data GEO bulk
272 Night Time Treatment -0.47 >More info -0.53 >More info Night Time Control 1hr white light pulse aerial rosette Original data
273 Te 3d 0.48 >More info 0.52 >More info Te CA Leaves Original data
274 AvrRpm1 2 h (leaf) 0.53 >More info 0.46 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
275 RPL18 TuMV inoculated polysomal RNA 0.58 >More info 0.41 >More info mock inoculated polysomal RNA PO Original data GEO bulk
276 rpl24 polysome 0.56 >More info 0.43 >More info WT polysome seedling shoot/aerial seedling Original data
277 bHLH122 ox -0.64 >More info -0.35 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
278 ARR21C-ox 0.59 >More info 0.40 >More info Col-0 Original data ARR21C overexpression
279 Dark 44min pls RedLigh 1min -0.39 >More info -0.60 >More info Dark 45 min Original data Light treatments
280 12h Col-0 0.42 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
281 sid2-2 24hpi A. brassicicola -0.50 >More info -0.48 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
282 Sha-3h IAA 0.60 >More info 0.38 >More info Sha-0h IAA whole plant Original data GEO bulk
283 mutant acs2C (single mutant) 0.55 >More info 0.43 >More info col control (single mutant) Original data GEO bulk
284 toc1-1-53hr 0.56 >More info 0.42 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
285 IAA 1 h 0.42 >More info 0.56 >More info Mock 1 h Original data Basic hormone treatment of seedlings
286 SCR-GR Time 1H Dex 0.43 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
287 OsRLCK253 expressing -0.42 >More info -0.56 >More info WT seedlings Original data GEO bulk
288 gun1-1 +lincomycin -0.48 >More info -0.50 >More info Col-0 +lincomycin Original data GEO bulk
289 treated group 0.48 >More info 0.50 >More info Control group Original data
290 seedling -S Exp 0.32 >More info 0.66 >More info seedling FN Exp seedling Original data
291 mbd4 mutant thaliana 10-day-old seedling 0.53 >More info 0.44 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
292 total mRNA eif3k 0.55 >More info 0.42 >More info total mRNA WT aerial part Original data GEO bulk
293 FarRed Light 4 h -0.37 >More info -0.60 >More info White Light 4 h Original data Light treatments
294 leaf blade in D 0.46 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
295 tt4 -0.47 >More info -0.50 >More info WT aerial region Original data GEO bulk
296 Laer Flg22+GA 2h 0.55 >More info 0.41 >More info Laer Control leaf discs Original data GEO bulk
297 C24-1h IAA 0.55 >More info 0.41 >More info C24-0h IAA whole plant Original data GEO bulk
298 Fei-0-1h IAA 0.52 >More info 0.44 >More info Fei-0-0h IAA whole plant Original data GEO bulk
299 gai Control 0.53 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
300 phr1 phl1 Root-Pi 0.44 >More info 0.52 >More info WT Shoot+Pi roots Original data GEO bulk
301 toc1-1-89hr -0.38 >More info -0.58 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
302 6h volatiles Sp. HRO-C48 0.46 >More info 0.50 >More info 6h untreated whole seedling Original data GEO bulk
303 rao2 H2O2 3h -0.41 >More info -0.55 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
304 sta1 0.37 >More info 0.59 >More info WT Original data GEO bulk
305 Heat shock 30%Inhibition 0.56 >More info 0.39 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
306 Col-0 shade 0.39 >More info 0.56 >More info Col-0 light seedlings Original data GEO bulk
307 CBF3 0mM NaCl 0.53 >More info 0.42 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
308 Col-0 DCA 6d 0.65 >More info 0.30 >More info Col-0 MOCK 6d Original data GEO bulk
309 cys-c1 leaf -0.53 >More info -0.42 >More info Leaf-WT leaves Original data GEO bulk
310 Heat shock 20%Inhibition 0.59 >More info 0.36 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
311 toc1-1-85hr -0.43 >More info -0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
312 swn-7 0.36 >More info 0.59 >More info Col whole plant Original data GEO bulk
313 Col-0 2h NAA 0.37 >More info 0.58 >More info Col-0 6h MOCK Original data GEO bulk
314 bak1-3 untreated 0.32 >More info 0.63 >More info WT untreated untreated Original data GEO bulk
315 SLWF infested 0.42 >More info 0.53 >More info SLWF uninfested rosette tissue Original data GEO bulk
316 clf-28 swn-7 0.54 >More info 0.40 >More info Col whole plant Original data GEO bulk
317 atmospheric CO2 low Mg shoot 0.55 >More info 0.39 >More info atmospheric CO2 normal Mg shoot Shoot Original data
318 Shoot -Cs 0.38 >More info 0.56 >More info Control-shoot Original data GEO bulk
319 camta1-2 0.52 >More info 0.42 >More info Col-0-WT Original data GEO bulk
320 CHLM overexpression -0.52 >More info -0.42 >More info Col-0 estr green tissue Original data GEO bulk
321 20h Col-0 0.33 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
322 IAA 0.5h 0.30 >More info 0.64 >More info control 0.5h root Original data GEO bulk
323 Mutant lwd1_lwd2 0.39 >More info 0.54 >More info Wildtype for phy mutants Original data GEO bulk
324 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.39 >More info 0.54 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
325 WT cold 12 h 0.37 >More info 0.56 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
326 Salt Stress 24 h (shoot) 0.52 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
327 pmr5 pmr6 0.50 >More info 0.43 >More info Col-0 Original data GEO bulk
328 Col-0-1h IAA 0.59 >More info 0.34 >More info Col-0-0h IAA whole plant Original data GEO bulk
329 35S:RPS4 eds1-2 8h -0.50 >More info -0.43 >More info 35S:RPS4 8h leaves Original data
330 ein3 eil1 JA -0.41 >More info -0.52 >More info JA Whole seedling Original data GEO bulk
331 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.52 >More info -0.40 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
332 sfr6 control -0.52 >More info -0.40 >More info WT control All aerial tissue Original data GEO bulk
333 OH1 0.55 >More info 0.37 >More info Col-0 leaves Original data GEO bulk
334 Mutant iaa17-6 (IAA) 0.52 >More info 0.40 >More info Col (IAA) Original data GEO bulk
335 IAA 2h 0.38 >More info 0.54 >More info control 2h root Original data GEO bulk
336 arr-dmso-sample 0.58 >More info 0.34 >More info Wt-dmso-sample seedling Original data
337 light -0.74 >More info -0.18 >More info dark light seedling Original data GEO bulk
338 Mutant nph4-1 (IAA) -0.31 >More info -0.61 >More info Col (IAA) Original data GEO bulk
339 WT +Pep2 2h 0.56 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
340 WT NAA 2h 0.39 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
341 Light 0.5h polysome-bound -0.35 >More info -0.56 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
342 4C 7d 0.39 >More info 0.52 >More info 4C 0h Original data GEO bulk
343 albino Ds13-2198-1 -0.38 >More info -0.53 >More info control Original data GEO bulk
344 ice1 control 0.59 >More info 0.32 >More info WT control Original data GEO bulk
345 Laer pretreat JA Flg22 1h 0.58 >More info 0.33 >More info Laer pretreat water control leaf discs Original data GEO bulk
346 Genotoxic Stress 3 h (shoot) -0.50 >More info -0.41 >More info Stress mock 3 h (shoot) Original data Stress treatments
347 des1.1 0.32 >More info 0.59 >More info Leaves-WT leaf Original data GEO bulk
348 Col-0 low R/FR 0.21 >More info 0.70 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
349 E.orontii Infection 3 day 0.34 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
350 sid2 0.52 >More info 0.38 >More info Col rosettes Original data GEO bulk
351 WT-NOCO2 INFECTED 0.51 >More info 0.39 >More info WT-MOCK Original data GEO bulk
352 oas-a1.1 shoot -0.40 >More info -0.50 >More info WT-Untreated Shoot Original data GEO bulk
353 rcf1-1 cold 0h 0.38 >More info 0.52 >More info WT cold 0h Control seedlings Original data GEO bulk
354 Imidazolinone EC50 0.38 >More info 0.52 >More info Carrier (Imidazolinone) Original data GEO bulk
355 WT 2-4h Xanthomonas 0.24 >More info 0.66 >More info WT T0 Original data GEO bulk
356 24h light (+Lincomycin) 0.32 >More info 0.58 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
357 Laer pretreat GA+JA Flg22 1h 0.56 >More info 0.33 >More info Laer pretreat water control leaf discs Original data GEO bulk
358 ein2-1 +elf18 2h -0.33 >More info -0.56 >More info WT +elf18 2h elf18 Original data GEO bulk
359 rao1-1 3h antimycin A -0.54 >More info -0.35 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
360 Chitosan 3h Treatment 0.53 >More info 0.36 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
361 Dark 40 min pls UV-A 5 min -0.33 >More info -0.55 >More info Dark 45 min Original data Light treatments
362 ice1 3H Cold 0.51 >More info 0.37 >More info WT 3H Cold Original data GEO bulk
363 Differentiation 24h 0.51 >More info 0.37 >More info Differentiation 0h leaves Original data
364 col-5 hrpA 4h 0.38 >More info 0.50 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
365 Col-0 Mock Shade 0.56 >More info 0.31 >More info Col-0 Mock WL seedlings Original data
366 npr1-3 MOCK 48h -0.27 >More info -0.60 >More info Col-0 MOCK 48h Original data GEO bulk
367 sicy-192 cotyledons 0.35 >More info 0.52 >More info WT cotyledons cotyledons Original data
368 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.30 >More info Laer pretreat water control leaf discs Original data GEO bulk
369 coi1-16 ein2 sid2 ozone 0.58 >More info 0.29 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
370 Mutant nph4-1_arf19-1 (IAA) -0.30 >More info -0.56 >More info Col (IAA) Original data GEO bulk
371 ORS1 induced 0.31 >More info 0.54 >More info mock-induced rosette leaves Original data GEO bulk
372 FOX line K16331 0.50 >More info 0.35 >More info empty vector control (T3) FOX lines Original data GEO bulk
373 shoot-10 μM DEX- 6 hr 0.50 >More info 0.35 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
374 pnp1-1 1wk +P 0.50 >More info 0.35 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
375 12h-DC3000 avrRpm1 0.28 >More info 0.57 >More info 12h-DC3000 leaves Original data GEO bulk
376 Norflurazon 0.30 >More info 0.54 >More info Col-0 Original data GEO bulk
377 Norflurazon 0.30 >More info 0.54 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
378 mil4 0.51 >More info 0.32 >More info Col rosettes Original data GEO bulk
379 Light 0.5h steady-state -0.31 >More info -0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
380 roots ethylene 0.30 >More info 0.53 >More info roots air Original data GEO bulk
381 roots IAA 0.31 >More info 0.52 >More info roots mock Original data GEO bulk
382 Laer Flg22 1h 0.50 >More info 0.32 >More info Laer Control leaf discs Original data GEO bulk
383 Cycloheximide 3 h 0.50 >More info 0.32 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
384 rpl24 nonpolysome 0.51 >More info 0.31 >More info WT nonpolysome seedling shoot/aerial seedling Original data
385 Bur-0-1h IAA 0.51 >More info 0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
386 ein2 1% sucrose 14-day-old -0.28 >More info -0.54 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
387 Col leaves 48h LT 0.32 >More info 0.50 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
388 npr1-1 SA -0.53 >More info -0.28 >More info Col-0 SA complete seedling Original data
389 PNO8 3 h 0.31 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
390 CCA14 dark late 0.53 >More info 0.27 >More info Col dark late Original data GEO bulk
391 -Sulfate 24 h 0.12 >More info 0.68 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
392 ein2-1 untreated -0.29 >More info -0.51 >More info WT untreated untreated Original data GEO bulk
393 Hydrogen Peroxide 500 uM 0.19 >More info 0.60 >More info Control RB and PER Hydrogen Peroxide Original data
394 IAA 1h 0.21 >More info 0.58 >More info control 1h root Original data GEO bulk
395 WT zebularine 5d -0.64 >More info -0.14 >More info WT mock 5d shoot apical meristem Original data
396 cdpk6-yfp 0.27 >More info 0.51 >More info Kan seedlings Original data GEO bulk
397 GO5; 8h switch to ambient CO2 concentrations; 0.20 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
398 ms1 unpollinated -0.51 >More info -0.26 >More info WT 8h-pollinated pistil Original data GEO bulk
399 Mutant arf2-6 -0.58 >More info -0.19 >More info Col Original data GEO bulk
400 mkk1 control rep 0.53 >More info 0.24 >More info Col-0 Time 0 rep Original data GEO bulk
401 Cd 18h root -0.24 >More info -0.53 >More info WT-Untreated Root Original data GEO bulk
402 TaFLS overexpression line (OE1) 0.25 >More info 0.52 >More info Col-0 Rosette leaves Original data
403 eif3h non-polysome 0.53 >More info 0.23 >More info WT non-polysome Original data GEO bulk
404 Shoot submergence 7h 0.76 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
405 npr1 sni1 ssn2 -0.51 >More info -0.25 >More info npr1 sni1 water water seedling Original data GEO bulk
406 6-trichlorophenoxyacetic acid 3 h 0.24 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
407 Wounding Stress3 h (root) -0.26 >More info -0.50 >More info Stress mock 3 h (root) Original data Stress treatments
408 pnp1-1 1wk -P 0.51 >More info 0.23 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
409 Ambient CO2 LIMITING N DAY 0.53 >More info 0.21 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
410 shoot control p35S 0.24 >More info 0.50 >More info shoot control total Original data GEO bulk
411 ABA SA 24h 0.15 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
412 ML (Mature leaves) 35DAS -0.54 >More info -0.17 >More info Control for tissue data Original data GEO bulk
413 E2Fa-Dpa 0.50 >More info 0.21 >More info WT Original data GEO bulk
414 seedling 3h after HZE WT 0.69 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
415 TNT-seedlings 0.50 >More info 0.21 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
416 Light 3day wt -0.54 >More info -0.16 >More info 0h wt Original data
417 Selenate (shoot) 0.15 >More info 0.55 >More info Ws (shoot) Original data GEO bulk
418 Shoot Selenate 0.15 >More info 0.55 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
419 2xX4x interploidy cross 0.20 >More info 0.50 >More info 2xX2x cross Original data GEO bulk
420 Starch sheath 5 days MS incubation 0.19 >More info 0.51 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
421 myb3 myb3r4d 0.16 >More info 0.53 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
422 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
423 seed germinating in countinuous light 24h SL 0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
424 Differentiation 36h 0.50 >More info 0.17 >More info Differentiation 0h leaves Original data
425 P.syringae AvrRpt2 4 h (leaf) 0.50 >More info 0.17 >More info Mock 4 h (leaf) Original data Elicitor treatments
426 Root wt CLE10 0.05 >More info 0.62 >More info Root wt CLE25 root tip Original data GEO bulk
427 Ws seedlings 0.60 >More info 0.07 >More info ged1 seedlings Original data GEO bulk
428 ged1 seedlings -0.60 >More info -0.07 >More info Ws seedlings Original data GEO bulk
429 Dark 2day ivd 0.67 >More info -0.01 >More info 0h ivd Original data
430 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
431 35:SUB1A 0.53 >More info 0.11 >More info WT whole seedling Original data GEO bulk
432 Laer pretreat GA Flg22 0h 0.53 >More info 0.10 >More info Laer pretreat water control leaf discs Original data GEO bulk
433 HairpinZ 4 h (leaf) 0.66 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
434 FLIGHT TAGESB plate 0.55 >More info 0.07 >More info GROUND CONTROL TAGESB plate Original data
435 Laer Flg22(Agrobacterium) 2h 0.08 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
436 Cs root -0.10 >More info -0.52 >More info control root Original data GEO bulk
437 ABA JA 24h 0.04 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
438 irradiated leaf (WT 5d) -0.04 >More info -0.56 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
439 Paclobutrazol 3 h 0.06 >More info 0.52 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
440 AtMYB30-ox 90-105 min Xanthomonas 0.56 >More info 0.01 >More info WT 90-105 min Xanthomonas Original data GEO bulk
441 Truncated AC2 T2 -0.50 >More info -0.06 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
442 rGRF 0.56 >More info -0.01 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
443 Blue Light 4 h -0.03 >More info -0.52 >More info White Light 4 h Original data Light treatments
444 MPK6 ox Shoot Hypoxia -0.01 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
445 rGRF3x35S:GIF 0.54 >More info 0.00 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
446 JA 3h 0.04 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
447 P. infestans 6 h (leaf) 0.68 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
448 CeO2 germinant 0.02 >More info -0.55 >More info Millipore Water germinant CeO2 seedling Original data
449 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
450 Col-0 24hpi A. brassicicola 0.50 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
451 root - 08% oxygen - 2h -0.06 >More info 0.56 >More info root - 21% oxygen - 2h Original data GEO bulk
452 sex1-3 -0.01 >More info 0.51 >More info Col-WT leaves Original data GEO bulk
453 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
454 Col PSTDC3000 24h 0.56 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
455 msh1 recA3 untreated -0.09 >More info 0.52 >More info WT untreated above-ground parts Original data GEO bulk
456 bri1-116 -0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
457 root - 08% oxygen - 30min -0.20 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
458 Light 3day hml -0.43 >More info 0.70 >More info 0h hml Original data