4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on E2Fa-Dpa
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "E2Fa-Dpa"  Help Download transcriptome of top 30
Score Experiment Correlation from
E2Fa-Dpa		 Correlation to
E2Fa-Dpa		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 E2Fa-Dpa 1.00 >More info 1.00 >More info WT Original data GEO bulk
2 SA 0.52 >More info 0.64 >More info WT mock Whole seedling Original data GEO bulk
3 ice1 6H Cold 0.49 >More info 0.66 >More info WT 6H Cold Original data GEO bulk
4 csn5 (csn5a-2 csn5b) light 0.59 >More info 0.55 >More info WT light Original data GEO bulk
5 seedlings +5AC 0.54 >More info 0.59 >More info control seedlings 10-day old whole seedling Original data GEO bulk
6 scrm-D:mute 0.63 >More info 0.50 >More info Col-0 WT whole seedling Original data GEO bulk
7 BLM+INA 0.43 >More info 0.67 >More info CK BLM and INA seedling Original data
8 toc1-1-57hr 0.46 >More info 0.62 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
9 seedling 3h after Gamma WT 0.39 >More info 0.69 >More info seedling day 1 unirradiated WT 3h Original data
10 ice1 control 0.42 >More info 0.65 >More info WT control Original data GEO bulk
11 sta1 0.51 >More info 0.54 >More info WT Original data GEO bulk
12 sid2 -0.47 >More info -0.58 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
13 toc1-1-53hr 0.48 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
14 ceh1 mutant 0.37 >More info 0.67 >More info Parent line Original data
15 Bur-0-3h IAA 0.56 >More info 0.47 >More info Bur-0h IAA whole plant Original data GEO bulk
16 Col-0 +lincomycin 0.44 >More info 0.59 >More info Col-0 -lincomycin Original data GEO bulk
17 seedling 1.5h after Gamma WT 0.38 >More info 0.65 >More info seedling day 1 unirradiated WT 1.5h Original data
18 ARR21C-ox 0.51 >More info 0.51 >More info Col-0 Original data ARR21C overexpression
19 csn3-1 light 0.55 >More info 0.46 >More info WT light Original data GEO bulk
20 Laer pretreat GA Flg22 1h 0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
21 Heat shock optimum 0.36 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
22 aba3-1 0.43 >More info 0.58 >More info wt Original data GEO bulk
23 ABA control 0.48 >More info 0.52 >More info No ABA control Original data GEO bulk
24 toc1-1-73hr 0.41 >More info 0.58 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
25 toc1-1-49hr 0.49 >More info 0.50 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
26 cpr5 0.39 >More info 0.60 >More info WT seedling Original data GEO bulk
27 GR-REV 30min 0.55 >More info 0.43 >More info Col 30min Original data GEO bulk
28 Cor 24h 0.35 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
29 INA 0.23 >More info 0.75 >More info CK INA seedling Original data
30 Chemically 0.44 >More info 0.54 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
31 GiantCell Root 0.51 >More info 0.46 >More info Control Root laser captured giant cells Original data GEO bulk
32 clf-28 swn-7 0.57 >More info 0.40 >More info Col whole plant Original data GEO bulk
33 Chitosan 3h Treatment 0.45 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
34 seedlings + TSA 0.40 >More info 0.57 >More info control seedlings 10-day old whole seedling Original data GEO bulk
35 scrm-D 0.40 >More info 0.57 >More info Col-0 WT whole seedling Original data GEO bulk
36 S58-2 0.36 >More info 0.61 >More info wt Original data GEO bulk
37 toc1-1-61hr 0.46 >More info 0.50 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
38 ice1 3H Cold 0.43 >More info 0.53 >More info WT 3H Cold Original data GEO bulk
39 AtLysM RLK1 mutant water 0.41 >More info 0.55 >More info WT water Original data GEO bulk
40 Imidazolinone EC50 0.42 >More info 0.54 >More info Carrier (Imidazolinone) Original data GEO bulk
41 hni9 high nitrogen 0.51 >More info 0.44 >More info WT high nitrogen roots Original data GEO bulk
42 Elevated CO2 AMPLE N DAY 0.31 >More info 0.64 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
43 ahg2-1 0.40 >More info 0.54 >More info WT (Col) control Original data GEO bulk
44 toc1-1-85hr 0.37 >More info 0.57 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
45 RPL18 TuMV inoculated total RNA 0.42 >More info 0.52 >More info mock inoculated total RNA PO Original data GEO bulk
46 WT-SA 0.44 >More info 0.50 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
47 cdpk6-yfp 0.31 >More info 0.63 >More info Kan seedlings Original data GEO bulk
48 Col-0 norflurazon 0.37 >More info 0.56 >More info Col-0 control Original data GEO bulk
49 ABA -0.57 >More info -0.36 >More info control Original data GEO bulk
50 toc1-1-81hr 0.36 >More info 0.56 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
51 BLM 0.39 >More info 0.53 >More info CK BLM seedling Original data
52 csn4-1 dark 0.51 >More info 0.41 >More info WT light Original data GEO bulk
53 smg7b-1 0.34 >More info 0.58 >More info WT whole plant Original data GEO bulk
54 oas-a1.1 Cd 18h 0.27 >More info 0.64 >More info Cd 18h root Root Original data GEO bulk
55 OH1 0.40 >More info 0.51 >More info Col-0 leaves Original data GEO bulk
56 nar1-4/- 0.31 >More info 0.60 >More info WT whole seedling Original data GEO bulk
57 apum23 0.34 >More info 0.56 >More info WT (Col-3) aerial parts Original data GEO bulk
58 csn5 (csn5a-2 csn5b) dark 0.54 >More info 0.36 >More info WT dark Original data GEO bulk
59 Genotoxic Stress 3 h (shoot) 0.13 >More info 0.77 >More info Stress mock 3 h (shoot) Original data Stress treatments
60 Norflurazon 0.36 >More info 0.54 >More info Col-0 Original data GEO bulk
61 toc1-1-65hr 0.38 >More info 0.52 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
62 Stem tissue 2 days NAA 0.23 >More info 0.67 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
63 camta2/3 warm 0.36 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
64 Norflurazon 0.36 >More info 0.54 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
65 Mutant sav3-2 (WL) 0.20 >More info 0.70 >More info Col-0 (WL) Original data GEO bulk
66 Col-0 INA 6d 0.33 >More info 0.57 >More info Col-0 MOCK 6d Original data GEO bulk
67 sav3-2 light 0.20 >More info 0.70 >More info Col-0 light seedlings Original data GEO bulk
68 IAA 3 h 0.34 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
69 WT 3h -P 0.27 >More info 0.61 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
70 upb1-1 elongation zone -0.35 >More info -0.53 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
71 L2.4 mutant 0.26 >More info 0.62 >More info Wt Original data GEO bulk
72 wavy 0.21 >More info 0.67 >More info WT Original data GEO bulk
73 indRKD4ox 0.38 >More info 0.50 >More info Control (35S-GVG) seedlings Original data GEO bulk
74 ABA+DMTU -0.58 >More info -0.30 >More info control Original data GEO bulk
75 ahg2-1sid2-2 0.30 >More info 0.58 >More info WT (Col) control Original data GEO bulk
76 irradiated leaf (cmt 1d) 0.18 >More info 0.70 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
77 bri1-116 0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
78 seedling 1.5h after HZE WT 0.36 >More info 0.51 >More info seedling day 1 unirradiated WT 1.5h Original data
79 csn3-1 dark 0.54 >More info 0.32 >More info WT dark Original data GEO bulk
80 S14-150 0.34 >More info 0.52 >More info wt Original data GEO bulk
81 csn4-1 mutant 0.51 >More info 0.35 >More info WT dark Original data GEO bulk
82 SPT4-R3 seedlings0 DAS 0.53 >More info 0.32 >More info Col-0 seedlings0 DAS seedlings Original data
83 Ovary 0.50 >More info 0.34 >More info Seedling Original data GEO bulk
84 Col whole leaf 5 dpi 0.32 >More info 0.52 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
85 bio4-1 mutant watered00µM biotin leaves -0.19 >More info -0.65 >More info bio4-1 mutant leaves leaves Original data GEO bulk
86 protoplasted roots pH4.6 0.30 >More info 0.54 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
87 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
88 UV Stress 24 h (shoot) 0.26 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
89 cpr5npr1svi1 0.27 >More info 0.57 >More info WT(COL) Original data GEO bulk
90 Shoot -P -0.50 >More info -0.33 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
91 Col-0 INA 48h 0.27 >More info 0.56 >More info Col-0 MOCK 48h Original data GEO bulk
92 R. solani AG8 0.28 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
93 Primisulfuron EC50 0.30 >More info 0.53 >More info Carrier (primisulfuron) Original data GEO bulk
94 seedling h S Exp 0.31 >More info 0.52 >More info seedling -S Exp seedling Original data
95 Cs shoot -0.15 >More info -0.67 >More info control shoot Original data GEO bulk
96 line J1551-5 days control + 2 days salt s 0.31 >More info 0.51 >More info line J1551-7 days-control Original data
97 sicy-192 cotyledons 0.28 >More info 0.54 >More info WT cotyledons cotyledons Original data
98 sni1 0.22 >More info 0.60 >More info WT Original data GEO bulk
99 Col0-PsmES4326-24hpi 0.20 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
100 21h-DC3000 hrpA 0.27 >More info 0.54 >More info 21h-DC3000 leaves Original data GEO bulk
101 ckh2 CK0 0.25 >More info 0.56 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
102 cpr5scv1 0.27 >More info 0.54 >More info WT(COL) Original data GEO bulk
103 Triazolopyrimidine EC50 0.30 >More info 0.51 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
104 Inflorescences Trp1 0.23 >More info 0.58 >More info Inflorescences ler inflorescences Original data GEO bulk
105 NAA 6h 0.50 >More info 0.30 >More info before treatment NAA root Original data GEO bulk
106 mutant-line1135 0.53 >More info 0.27 >More info WT-control whole plant Original data GEO bulk
107 ddm1-12 0.53 >More info 0.27 >More info wt whole seedling Original data GEO bulk
108 Shoot apex inflorescence (after bolting) 0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
109 npr1-3 DCA 48h 0.15 >More info 0.64 >More info npr1-3 MOCK 48h Original data GEO bulk
110 root endodermis and quiescent center pH4.6 0.26 >More info 0.53 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
111 SCR 96hr-S 0.26 >More info 0.53 >More info SCR 0hr endodermis Original data
112 seedling 24h after HZE WT 0.25 >More info 0.54 >More info seedling day 2 unirradiated WT 24h Original data
113 SCR 72hr-S 0.25 >More info 0.53 >More info SCR 0hr endodermis Original data
114 UV Stress 24 h (root) -0.50 >More info -0.27 >More info Stress mock 24 h (root) Original data Stress treatments
115 Starch sheath 5 days MS incubation 0.19 >More info 0.58 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
116 root callus inducing medium 96 h 0.52 >More info 0.24 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
117 5-Triiodobenzoic acid3 h 0.24 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
118 Mutant NahG(leaf) -0.17 >More info -0.57 >More info Col-0 (leaf) Original data GEO bulk
119 L2.5 mutant -0.17 >More info -0.56 >More info Wt Original data GEO bulk
120 seu-3 ant-1 -0.51 >More info -0.22 >More info Col-0 Original data GEO bulk
121 root - 04% oxygen - 2h 0.12 >More info 0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
122 eds16 whole leaf 5dpi -0.22 >More info -0.51 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
123 OXUPB1-2 meristematic zone 0.23 >More info 0.50 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
124 R. solani AG2-1 0.19 >More info 0.54 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
125 SCR 48hr-S 0.22 >More info 0.51 >More info SCR 0hr endodermis Original data
126 tfl1-1-16ºC -0.50 >More info -0.22 >More info WT-16ºC Original data GEO bulk
127 root - 04% oxygen - 48h 0.18 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
128 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
129 aerial organ callus inducing medium 12 h 0.21 >More info 0.50 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
130 root cortex pH4.6 0.21 >More info 0.50 >More info root cortex pH5.7 Original data GEO bulk
131 cpr5 0.20 >More info 0.51 >More info WT(COL) Original data GEO bulk
132 pmr5 pmr6 0.21 >More info 0.50 >More info Col-0 Original data GEO bulk
133 bbx24 in Simulated Shade -0.18 >More info -0.53 >More info WT in simulated shade shade seedling Original data
134 irradiated leaf (WT 1d) 0.14 >More info 0.56 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
135 atm3 0.05 >More info -0.75 >More info Col0 whole plant Original data GEO bulk
136 rdr6-15 0.09 >More info 0.61 >More info Col-0 plant inflorescence Original data
137 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
138 0.125 mM gold 24 h 0.18 >More info 0.51 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
139 root Dosed gold 0.18 >More info 0.51 >More info root No gold .125 mM gold 24 h roots Original data
140 Glyphosate EC50 0.17 >More info 0.51 >More info Carrier (Glyphosate) Original data GEO bulk
141 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
142 46T-CK 0.18 >More info 0.50 >More info WT-CK none Original data
143 Col-0 wt Hypoxic 0.16 >More info 0.51 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
144 DUO1 induced 6h 0.11 >More info 0.53 >More info 6hr-not-induced whole plant Original data GEO bulk
145 red illumination +lincomycin 0.07 >More info 0.56 >More info red illumination -lincomycin Original data GEO bulk
146 NahG -0.08 >More info -0.55 >More info Col-0 Leaves Original data GEO bulk
147 TNT-seedlings 0.06 >More info 0.57 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
148 mutant-line409 -0.06 >More info -0.53 >More info WT-control whole plant Original data GEO bulk
149 rsa3-1 Na 24h -0.01 >More info 0.59 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
150 Whole root - low pH 12H 0.01 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
151 ABA JA 24h -0.52 >More info -0.04 >More info EtOH 24h 24hr Original data GEO bulk
152 E.orontii Infection 6 h -0.01 >More info 0.57 >More info Uninfection 6 h Original data Elicitor treatments
153 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
154 root - 01% oxygen - 2h 0.02 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
155 6h +Pi 0.02 >More info -0.55 >More info 6h -Pi root Original data GEO bulk
156 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
157 myb3 myb3r4d -0.16 >More info 0.66 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
158 ara1/2mut -0.03 >More info 0.53 >More info Col-3 Original data GEO bulk
159 AtMinD1 Prolonged-induction -0.03 >More info 0.52 >More info Control whole plant Original data GEO bulk
160 WT-16ºC 0.03 >More info -0.50 >More info WT-23ºC Original data GEO bulk
161 ckh2 CK25 -0.08 >More info 0.53 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
162 Whole root - low pH 48H 0.13 >More info -0.58 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
163 Full C2 T3 0.17 >More info -0.61 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
164 Polysomal RNA 35S:AtCSP1-FH1 0.13 >More info -0.52 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
165 Laer GA 1h 0.21 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk