4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Chemically
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List of experiments correlated with "Chemically"  Help Download transcriptome of top 30
Score Experiment Correlation from
Chemically		 Correlation to
Chemically		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Chemically 1.00 >More info 1.00 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
2 IAA 3 h 0.76 >More info 0.81 >More info Mock 3 h Original data Basic hormone treatment of seedlings
3 bbx24 in Simulated Shade -0.81 >More info -0.70 >More info WT in simulated shade shade seedling Original data
4 Col-0 2h NAA 0.82 >More info 0.68 >More info Col-0 6h MOCK Original data GEO bulk
5 AgNO3 3 h 0.83 >More info 0.66 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
6 Col-0 6h NAA 0.77 >More info 0.72 >More info Col-0 6h MOCK Original data GEO bulk
7 IAA 0.5h 0.81 >More info 0.67 >More info control 0.5h root Original data GEO bulk
8 Fei-0-3h IAA 0.77 >More info 0.71 >More info Fei-0-0h IAA whole plant Original data GEO bulk
9 IAA 2h 0.75 >More info 0.71 >More info control 2h root Original data GEO bulk
10 C24-3h IAA 0.78 >More info 0.67 >More info C24-0h IAA whole plant Original data GEO bulk
11 5-Triiodobenzoic acid3 h 0.80 >More info 0.62 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
12 NAA 6h 0.76 >More info 0.65 >More info before treatment NAA root Original data GEO bulk
13 TNT-seedlings 0.66 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
14 Mutant arf2-6 (IAA) 0.83 >More info 0.57 >More info Col (IAA) Original data GEO bulk
15 arr-dmso-sample 0.75 >More info 0.64 >More info Wt-dmso-sample seedling Original data
16 Mutant axr3-1 (IAA) 0.69 >More info 0.69 >More info Col (IAA) Original data GEO bulk
17 IAA 1 h 0.66 >More info 0.72 >More info Mock 1 h Original data Basic hormone treatment of seedlings
18 aerial organ callus inducing medium 24h 0.73 >More info 0.65 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
19 toc1-1-81hr 0.73 >More info 0.64 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
20 intact root auxin 0.73 >More info 0.63 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
21 IAA 4h 0.76 >More info 0.60 >More info control 4h root Original data GEO bulk
22 aerial organ callus inducing medium 48 h 0.76 >More info 0.59 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
23 inhibitor B Treated 0.74 >More info 0.61 >More info Negative Control Original data GEO bulk
24 C24-1h IAA 0.73 >More info 0.60 >More info C24-0h IAA whole plant Original data GEO bulk
25 epidermis auxin 0.74 >More info 0.59 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
26 roots IAA 0.66 >More info 0.67 >More info roots mock Original data GEO bulk
27 columella auxin 0.68 >More info 0.64 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
28 Mutant nph4-1 (IAA) -0.69 >More info -0.63 >More info Col (IAA) Original data GEO bulk
29 SA 0.70 >More info 0.61 >More info WT mock Whole seedling Original data GEO bulk
30 aux1 mutant roots air -0.77 >More info -0.54 >More info roots IAA Original data GEO bulk
31 Mutant iaa17-6 (IAA) 0.86 >More info 0.45 >More info Col (IAA) Original data GEO bulk
32 toc1-1-73hr 0.68 >More info 0.62 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
33 Whole root - S 3H 0.74 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
34 R. solani AG8 0.67 >More info 0.63 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
35 Bur-0-3h IAA 0.70 >More info 0.59 >More info Bur-0h IAA whole plant Original data GEO bulk
36 toc1-1-53hr 0.69 >More info 0.59 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
37 cpctry 0.63 >More info 0.63 >More info Col Original data GEO bulk
38 pericycle auxin 0.68 >More info 0.57 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
39 aerial organ callus inducing medium 12 h 0.69 >More info 0.56 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
40 toc1-1-77hr 0.68 >More info 0.57 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
41 toc1-1-85hr 0.70 >More info 0.55 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
42 CeO2 germinant -0.65 >More info -0.60 >More info Millipore Water germinant CeO2 seedling Original data
43 root control pGL2 0.77 >More info 0.48 >More info root control total control root Original data GEO bulk
44 IAA 12h 0.72 >More info 0.52 >More info control 12h root Original data GEO bulk
45 root epidermis and lateral root cap pH4.6 0.75 >More info 0.49 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
46 IAA 0.5 h 0.63 >More info 0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
47 whole roots -Fe 72 hour 0.77 >More info 0.45 >More info whole roots standard Original data GEO bulk
48 Fe starvation 72 h 0.77 >More info 0.45 >More info Control Original data GEO bulk
49 root cells epidermis 140mM NaCl 3 hours 0.76 >More info 0.46 >More info root cells epidermis standard 1 hour root cells epidermis Original data
50 phr1 Shoot-Pi 0.76 >More info 0.45 >More info WT Root-Pi shoots Original data GEO bulk
51 AtLysM RLK1 mutant water 0.70 >More info 0.51 >More info WT water Original data GEO bulk
52 WT seedlings IAA 0.69 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk
53 IAA 8h 0.66 >More info 0.54 >More info control 8h root Original data GEO bulk
54 root Dosed gold 0.73 >More info 0.47 >More info root No gold .125 mM gold 24 h roots Original data
55 0.125 mM gold 24 h 0.73 >More info 0.47 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
56 gun1-9 control 0.69 >More info 0.51 >More info Col-0 control Original data GEO bulk
57 plant (Col-0) 4h phytoprostane A1 0.73 >More info 0.47 >More info plant (tga2-5-6) 4h control Original data GEO bulk
58 root cells epidermis 140mM NaCl 8 hours 0.73 >More info 0.46 >More info root cells epidermis standard 1 hour root cells epidermis Original data
59 Whole root - low pH 24H 0.75 >More info 0.44 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
60 iae1 -0.66 >More info -0.52 >More info B179 Original data GEO bulk
61 Ibuprofen 3 h 0.76 >More info 0.42 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
62 NAA 3h 0.52 >More info 0.65 >More info before treatment NAA root Original data GEO bulk
63 seedlings +5AC 0.75 >More info 0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
64 BI-1-3h IAA 0.65 >More info 0.52 >More info BI-1-0h IAA whole plant Original data GEO bulk
65 6-trichlorophenoxyacetic acid 3 h 0.72 >More info 0.45 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
66 Phytoprostane A1 4 h 0.68 >More info 0.48 >More info Col-0 Original data GEO bulk
67 Mutant arf19-1 (IAA) -0.77 >More info -0.39 >More info Col (IAA) Original data GEO bulk
68 IAA 0h -0.73 >More info -0.43 >More info control 0h root Original data GEO bulk
69 root cells epidermis 140mM NaCl 32 hours 0.70 >More info 0.45 >More info root cells epidermis standard 1 hour root cells epidermis Original data
70 root cells epidermis 140mM NaCl 48 hours 0.73 >More info 0.42 >More info root cells epidermis standard 1 hour root cells epidermis Original data
71 Chitosan 3h Treatment 0.75 >More info 0.40 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
72 ahg2-1sid2-2 0.60 >More info 0.54 >More info WT (Col) control Original data GEO bulk
73 whole roots -Fe 48 hour 0.75 >More info 0.39 >More info whole roots standard Original data GEO bulk
74 root cells stele 140mM NaCl 3 hours 0.78 >More info 0.36 >More info root cells stele standard 1 hour root cells stele Original data
75 Whole root - S 12H 0.63 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
76 WT NAA 2h 0.39 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
77 hira-protoplast 0.69 >More info 0.45 >More info WT-protoplast protoplast Original data
78 FarRed Light 45min 0.42 >More info 0.72 >More info White Light 45min Original data Light treatments
79 root hypoxia pSHR 0.64 >More info 0.49 >More info root hypoxia total hypoxia root Original data GEO bulk
80 hira-root -0.78 >More info -0.35 >More info WT-root root Original data
81 Mutant nph4-1_arf19-1 (IAA) -0.58 >More info -0.55 >More info Col (IAA) Original data GEO bulk
82 root callus inducing medium 48 h 0.63 >More info 0.50 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
83 oas-a1.1 Cd 18h 0.60 >More info 0.52 >More info Cd 18h root Root Original data GEO bulk
84 R. solani AG2-1 0.55 >More info 0.57 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
85 root control pRPL11C 0.75 >More info 0.37 >More info root control total control root Original data GEO bulk
86 Whole root - low pH 12H 0.67 >More info 0.45 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
87 root epidermis and lateral root cap -S 0.61 >More info 0.51 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
88 phr1 phl1 Root-Pi -0.70 >More info -0.42 >More info WT Shoot+Pi roots Original data GEO bulk
89 GA4 3 h (ga1 seed) 0.78 >More info 0.33 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
90 Fei-0-1h IAA 0.45 >More info 0.66 >More info Fei-0-0h IAA whole plant Original data GEO bulk
91 root cells columella root cap -Fe 0.71 >More info 0.40 >More info whole roots standard Original data GEO bulk
92 toc1-1-57hr 0.69 >More info 0.42 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
93 vtc1-1 0.39 >More info 0.72 >More info Col-0 whole plant Original data GEO bulk
94 IAA 1h 0.49 >More info 0.62 >More info control 1h root Original data GEO bulk
95 upb1-1 elongation zone -0.61 >More info -0.49 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
96 IAA 24h 0.57 >More info 0.53 >More info control 24h root Original data GEO bulk
97 NaCl cpctry 0.65 >More info 0.45 >More info NaCl Col Original data GEO bulk
98 roottip hypoxia total 0.66 >More info 0.44 >More info roottip control total Original data GEO bulk
99 dicamba 0.65 >More info 0.45 >More info WT mock whole seedling Original data GEO bulk
100 line J1551-5 days control + 2 days salt s 0.66 >More info 0.43 >More info line J1551-7 days-control Original data
101 rhd2 0.75 >More info 0.34 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
102 rsa3-1 Na 24h 0.41 >More info 0.68 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
103 IAA/inhibitor B Treated 0.61 >More info 0.48 >More info IAA Treated Original data GEO bulk
104 DUO1 induced 12h 0.72 >More info 0.37 >More info 12hr-not-induced whole plant Original data GEO bulk
105 P.p 30hai 0.74 >More info 0.35 >More info At-Control roots Original data GEO bulk
106 IAA Treated 0.36 >More info 0.73 >More info Negative Control Original data GEO bulk
107 9 hr Hypoxia 1 hr recovery Total RNA 0.68 >More info 0.40 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
108 root callus inducing medium 96 h 0.62 >More info 0.46 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
109 Cocultivation 8 hrs root 0.60 >More info 0.48 >More info Mock cocultivation 8 hrs root Root Original data
110 Bur-0-30min IAA 0.64 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
111 Mutant iaa17-6 -0.75 >More info -0.32 >More info Col Original data GEO bulk
112 WT-16ºC -0.63 >More info -0.44 >More info WT-23ºC Original data GEO bulk
113 Bur-0-1h IAA 0.52 >More info 0.55 >More info Bur-0h IAA whole plant Original data GEO bulk
114 root cells stele 140mM NaCl 8 hours 0.69 >More info 0.38 >More info root cells stele standard 1 hour root cells stele Original data
115 Seedling KUA1-IOX est 0.70 >More info 0.37 >More info Seedling KUA1-IOX mock Original data
116 roottip control p35S 0.70 >More info 0.37 >More info roottip control total control roottip Original data GEO bulk
117 root control pPEP 0.70 >More info 0.37 >More info root control total control root Original data GEO bulk
118 root longitudinal zone-4 pH 4.6 0.59 >More info 0.48 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
119 Oxidative Stress 3 h (root) -0.72 >More info -0.34 >More info Stress mock 3 h (root) Original data Stress treatments
120 GR-REV 30min 0.66 >More info 0.40 >More info Col 30min Original data GEO bulk
121 WT+H2O2 0.67 >More info 0.39 >More info WT H2O2 Original data GEO bulk
122 Cycloheximide 3 h 0.66 >More info 0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
123 Octopus mutant DYG25 0.69 >More info 0.37 >More info WS Original data GEO bulk
124 cdkf:1-2 0.63 >More info 0.42 >More info wt seedling young seedlings Original data GEO bulk
125 24h +Pi -0.64 >More info -0.41 >More info 24h -Pi root Original data GEO bulk
126 root control p35S 0.76 >More info 0.29 >More info root control total control root Original data GEO bulk
127 Col-0 overexpressing At1g54160 control 0.60 >More info 0.45 >More info WT no treatement Original data GEO bulk
128 At1g54160 ox 0.60 >More info 0.45 >More info Col-0 Original data GEO bulk
129 aerial organ callus inducing medium 96 h 0.58 >More info 0.47 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
130 root hypoxia pGL2 0.60 >More info 0.44 >More info root hypoxia total hypoxia root Original data GEO bulk
131 DUO1 induced 24h 0.64 >More info 0.40 >More info 24hr-not-induced whole plant Original data GEO bulk
132 GR-REV 60min 0.70 >More info 0.34 >More info Col 60min Original data GEO bulk
133 stele auxin 0.54 >More info 0.50 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
134 TiO2 germinant -0.64 >More info -0.39 >More info Millipore Water germinant TiO2 seedling Original data
135 chito-tetramer 0.68 >More info 0.35 >More info Col Mock Original data GEO bulk
136 Tsu -Fe 24h Roots 0.68 >More info 0.35 >More info Tsu +Fe 24h Roots Original data GEO bulk
137 Tsu-1 -Fe 24h 0.68 >More info 0.35 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
138 SCR-GR Time 3H Dex 0.72 >More info 0.31 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
139 35:SUB1C -0.58 >More info -0.44 >More info WT whole seedling Original data GEO bulk
140 root control pWOL 0.70 >More info 0.32 >More info root control total control root Original data GEO bulk
141 nia1nia2noa1-2 0.68 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
142 Col upon hypoxia 6 hrs 0.67 >More info 0.34 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
143 OXUPB1-2 meristematic zone 0.65 >More info 0.36 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
144 root cells endodermis and quiescent center -Fe 0.65 >More info 0.36 >More info whole roots standard Original data GEO bulk
145 ein2 mutant roots IAA 0.83 >More info 0.18 >More info roots ethylene Original data GEO bulk
146 slr-1 6h NAA -0.44 >More info -0.57 >More info Col-0 6h NAA Original data GEO bulk
147 Selenate (root) 0.73 >More info 0.27 >More info Ws (root) Original data GEO bulk
148 Root Selenate 0.73 >More info 0.27 >More info Root control 40 micromolar selenate Root Original data GEO bulk
149 root cells epidermis 140mM NaCl 20 hours 0.63 >More info 0.37 >More info root cells epidermis standard 1 hour root cells epidermis Original data
150 root cells stele 140mM NaCl 1 hour 0.70 >More info 0.30 >More info root cells stele standard 1 hour root cells stele Original data
151 nia1nia2 0.66 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
152 HRE1-RNAi20 normoxia -0.55 >More info -0.45 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
153 GR-bdl DEX IAA -0.29 >More info -0.71 >More info GR-bdl IAA Original data GEO bulk
154 ani1 T0.5 -0.59 >More info -0.40 >More info WT T0.5 root tissue Original data GEO bulk
155 Mutant iaa5_6_19(IAA) 0.69 >More info 0.30 >More info Col (IAA) Original data GEO bulk
156 root protoplasts 40 mM NaCl 0.62 >More info 0.37 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
157 Mutant axr3-1 0.53 >More info 0.46 >More info Col Original data GEO bulk
158 UV Stress 24 h (root) -0.80 >More info -0.19 >More info Stress mock 24 h (root) Original data Stress treatments
159 Whole root - S 24H 0.57 >More info 0.42 >More info Whole root - S 0H Original data GEO bulk
160 DUO1 induced 6h 0.71 >More info 0.28 >More info 6hr-not-induced whole plant Original data GEO bulk
161 BLM+INA 0.62 >More info 0.37 >More info CK BLM and INA seedling Original data
162 ARR21C-ox 0.68 >More info 0.31 >More info Col-0 Original data ARR21C overexpression
163 Salicylic Acid 3 h 0.64 >More info 0.35 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
164 wavy 0.54 >More info 0.44 >More info WT Original data GEO bulk
165 E2Fa-Dpa 0.54 >More info 0.44 >More info WT Original data GEO bulk
166 root cells endodermis 140mM NaCl 48 hours 0.58 >More info 0.40 >More info root cells endodermis standard 1 hour root cells endodermis Original data
167 arr-BA-sample 0.69 >More info 0.28 >More info Wt-BA-sample seedling Original data
168 35S-MIF1 dark grown -0.71 >More info -0.26 >More info Dark-grown WT control Original data GEO bulk
169 root control pSultr2:2 0.65 >More info 0.32 >More info root control total control root Original data GEO bulk
170 vte1-1 1d vernalization 0.68 >More info 0.29 >More info WT 1d vernalization Original data GEO bulk
171 seedlings + TSA 0.55 >More info 0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
172 35S::HRE1 Aerobic -0.45 >More info -0.52 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
173 Col-O low light -0.64 >More info -0.32 >More info Col-O bule light Original data GEO bulk
174 root control pSHR 0.66 >More info 0.30 >More info root control total control root Original data GEO bulk
175 root callus inducing medium 24h 0.52 >More info 0.44 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
176 WT NAA 1h 0.33 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
177 Differentiation 24h 0.46 >More info 0.50 >More info Differentiation 0h leaves Original data
178 Brz220 12 h 0.65 >More info 0.30 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
179 INA 0.36 >More info 0.59 >More info CK INA seedling Original data
180 LTN008-2 aza-dc 0.68 >More info 0.26 >More info LTN012-2 Mock Original data
181 Mutant iaa5_6_19 -0.79 >More info -0.15 >More info Col Original data GEO bulk
182 Red Light 45min 0.39 >More info 0.55 >More info White Light 45min Original data Light treatments
183 Nicotinamide-81hr 0.62 >More info 0.32 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
184 rsl4 0.71 >More info 0.23 >More info Col-0 Control root Original data GEO bulk
185 4x -0.61 >More info -0.33 >More info 2x two week old seedlings Original data
186 protoplasted roots pH4.6 0.53 >More info 0.41 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
187 toc1-1-49hr 0.66 >More info 0.27 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
188 9 hr Hypoxia Total RNA 0.65 >More info 0.28 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
189 ahg2-1 0.64 >More info 0.29 >More info WT (Col) control Original data GEO bulk
190 cys-c1 root 0.68 >More info 0.24 >More info Root-WT roots Original data GEO bulk
191 embryo paclobutrazol 0.65 >More info 0.27 >More info embryo-control paclobutrazol embryo Original data GEO bulk
192 Root -Cs 0.52 >More info 0.39 >More info Control-root Original data GEO bulk
193 root cells stele 140mM NaCl 48 hours 0.56 >More info 0.35 >More info root cells stele standard 1 hour root cells stele Original data
194 Whole root - S 48H 0.56 >More info 0.35 >More info Whole root - S 0H Original data GEO bulk
195 root hypoxia total 0.65 >More info 0.26 >More info root control total Original data GEO bulk
196 Nicotinamide-57hr 0.64 >More info 0.27 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
197 root stele pH4.6 0.61 >More info 0.30 >More info root stele pH5.7 Original data GEO bulk
198 TAMM27 roots 2hr KNO3 nitrogen 0.59 >More info 0.32 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
199 WT 30μM arsenate 8 hours. 0.59 >More info 0.32 >More info WT control (not supplemented). Original data
200 dark +H2O2 0.55 >More info 0.35 >More info dark 5 mM H2O2 seedling Original data GEO bulk
201 chito-octamer 0.65 >More info 0.25 >More info Col Mock Original data GEO bulk
202 root cells -Fe 0.65 >More info 0.25 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
203 root cells cortex 140mM NaCl 3 hours 0.57 >More info 0.33 >More info root cells cortex standard 1 hour root cells cortex Original data
204 Genotoxic Stress 3 h (root) -0.74 >More info -0.15 >More info Stress mock 3 h (root) Original data Stress treatments
205 embryo ABA 0.65 >More info 0.24 >More info embryo-control ABA embryo Original data GEO bulk
206 35S::ZAT12 0.60 >More info 0.29 >More info gl1 Original data GEO bulk
207 Ovary 0.55 >More info 0.33 >More info Seedling Original data GEO bulk
208 IBM1 knockout -0.33 >More info -0.55 >More info WT Original data GEO bulk
209 Col-0 low oxygen 0.51 >More info 0.37 >More info Col-0 control low oxygen root Original data GEO bulk
210 gul2-1 mutant 0.61 >More info 0.27 >More info WT 7 day-old whole seedlings Original data
211 roottip hypoxia p35S 0.62 >More info 0.26 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
212 root cells endodermis 140mM NaCl 3 hours 0.57 >More info 0.31 >More info root cells endodermis standard 1 hour root cells endodermis Original data
213 root cortex pH4.6 0.53 >More info 0.34 >More info root cortex pH5.7 Original data GEO bulk
214 BR 0.56 >More info 0.31 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
215 root cells stele 140mM NaCl 32 hours 0.51 >More info 0.36 >More info root cells stele standard 1 hour root cells stele Original data
216 BLM 0.59 >More info 0.28 >More info CK BLM seedling Original data
217 erf5 erf6 -0.64 >More info -0.23 >More info WT+water water seedlings Original data GEO bulk
218 9m.KCl 0.52 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
219 MG132 3 h 0.71 >More info 0.16 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
220 seedling -S Exp 0.50 >More info 0.37 >More info seedling FN Exp seedling Original data
221 P.p 2.5hai 0.58 >More info 0.29 >More info At-Control roots Original data GEO bulk
222 ani1 T16 -0.69 >More info -0.18 >More info WT T16 root tissue Original data GEO bulk
223 plant (tga2-5-6) 4h phytoprostane A1 0.54 >More info 0.32 >More info plant (tga2-5-6) 4h control Original data GEO bulk
224 root hypoxia pRPL11C 0.66 >More info 0.20 >More info root hypoxia total hypoxia root Original data GEO bulk
225 P.p 6hai 0.62 >More info 0.24 >More info At-Control roots Original data GEO bulk
226 clf-28 -0.75 >More info -0.11 >More info Col whole plant Original data GEO bulk
227 12h volatiles Sp. HRO-C48 -0.51 >More info -0.35 >More info 12h untreated whole seedling Original data GEO bulk
228 L2.4 mutant 0.57 >More info 0.29 >More info Wt Original data GEO bulk
229 root longitudinal zone-3 pH 4.6 0.57 >More info 0.29 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
230 nbp35-3/- -0.55 >More info -0.30 >More info WT whole seedling Original data GEO bulk
231 KCl germinant -0.51 >More info -0.34 >More info Millipore Water germinant KCl seedling Original data
232 Nicotinamide-53hr 0.56 >More info 0.29 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
233 Whole root - low pH 48H -0.54 >More info -0.31 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
234 ahg2-1abi1-1 0.65 >More info 0.20 >More info WT (Col) control Original data GEO bulk
235 atmospheric CO2 low Mg root -0.66 >More info -0.19 >More info atmospheric CO2 normal Mg root Root Original data
236 mp-B4149 mutant IAA 0.56 >More info 0.29 >More info GR-bdl IAA Original data GEO bulk
237 csn5 (csn5a-2 csn5b) dark 0.50 >More info 0.35 >More info WT dark Original data GEO bulk
238 toc1-1-65hr 0.59 >More info 0.26 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
239 SAM SE 35S:AGL15 -0.64 >More info -0.21 >More info SAM SE Col Original data GEO bulk
240 vte2-1 1d vernalization -0.64 >More info -0.21 >More info WT 1d vernalization Original data GEO bulk
241 KAN1-GR 30min 0.75 >More info 0.10 >More info KAN1-GR 0min Original data GEO bulk
242 whole roots 140 mM NaCl 1 hour 0.67 >More info 0.17 >More info whole roots standard Original data GEO bulk
243 whole roots -Fe 12 hour 0.68 >More info 0.16 >More info whole roots standard Original data GEO bulk
244 chl1-5 10mM NH4NO3 -0.66 >More info -0.18 >More info col 10mM NH4NO3 Root Original data
245 Nicotinamide-85hr 0.58 >More info 0.26 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
246 CCA14 dark late 0.76 >More info 0.08 >More info Col dark late Original data GEO bulk
247 Col 0 2h KNO3 -0.61 >More info -0.23 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
248 ahg3-1 0.76 >More info 0.08 >More info ABA control Original data GEO bulk
249 phyABDE 4-day dark- 2 hours Rc50 -0.58 >More info -0.26 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
250 Col-0 wt Hypoxic 0.68 >More info 0.15 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
251 Fei-0-30min IAA 0.32 >More info 0.51 >More info Fei-0-0h IAA whole plant Original data GEO bulk
252 GR-REV 120min 0.59 >More info 0.24 >More info Col 120min Original data GEO bulk
253 ABA control 0.64 >More info 0.18 >More info No ABA control Original data GEO bulk
254 Stigma 0.52 >More info 0.30 >More info Seedling Original data GEO bulk
255 root hair -0.71 >More info -0.11 >More info Control for tissue data root hairs Original data GEO bulk
256 Nicotinamide-61hr 0.60 >More info 0.22 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
257 seedlings protease IV 0.57 >More info 0.25 >More info seedlings nontreated control whole seedling Original data
258 9m.KNO3 0.55 >More info 0.26 >More info To. KNO3 14 day old Roots Original data GEO bulk
259 hni9 high nitrogen 0.50 >More info 0.31 >More info WT high nitrogen roots Original data GEO bulk
260 root cells epidermis 140mM NaCl 1 hour 0.54 >More info 0.27 >More info root cells epidermis standard 1 hour root cells epidermis Original data
261 noa1-2 0.63 >More info 0.18 >More info Col-0 whole seedlings Original data GEO bulk
262 toc1-1-61hr 0.63 >More info 0.18 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
263 Brz220 3 h 0.59 >More info 0.22 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
264 root cells stele -Fe 0.58 >More info 0.23 >More info whole roots standard Original data GEO bulk
265 Col-0 Root 100 mM ATP 30 min 0.64 >More info 0.16 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
266 WT(Ler) Rc50 -0.61 >More info -0.19 >More info WT(Ler) Dark Original data GEO bulk
267 indRKD4ox 0.50 >More info 0.30 >More info Control (35S-GVG) seedlings Original data GEO bulk
268 Root P recovery 0.72 >More info 0.08 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
269 35S::RSL4 -0.57 >More info -0.23 >More info Col-0 Control root Original data GEO bulk
270 elevated CO2 high Mg root -0.59 >More info -0.20 >More info atmospheric CO2 high Mg root Root Original data
271 toc1-1-69hr 0.66 >More info 0.13 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
272 T101A 10mM NH4NO3 -0.65 >More info -0.14 >More info col 10mM NH4NO3 Root Original data
273 Heat shock optimum 0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
274 Leafminer damaged seedlings 0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
275 pif3 Dark 1h -0.70 >More info -0.09 >More info WT Dark 1h etiolated seedling Original data GEO bulk
276 DFPM 0.57 >More info 0.22 >More info control Original data GEO bulk
277 Col-0 0h NAA 0.62 >More info 0.16 >More info Col-0 6h MOCK Original data GEO bulk
278 Drought Stress 24 h (root) -0.56 >More info -0.22 >More info Stress mock 24 h (root) Original data Stress treatments
279 P.p 10.5hai 0.54 >More info 0.24 >More info At-Control roots Original data GEO bulk
280 IRP1-OE-Fe--root -0.60 >More info -0.18 >More info COL-0-Fe--root root Original data
281 root hypoxia pPEP 0.62 >More info 0.16 >More info root hypoxia total hypoxia root Original data GEO bulk
282 root longitudinal zone-4 NaCl 0.61 >More info 0.17 >More info root longitudinal zone-4 Original data GEO bulk
283 Shoot apex inflorescence (after bolting) 0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
284 Sha-1h IAA 0.24 >More info 0.54 >More info Sha-0h IAA whole plant Original data GEO bulk
285 whole roots -Fe 24hour 0.57 >More info 0.21 >More info whole roots standard Original data GEO bulk
286 COL-0-Fe--root 0.57 >More info 0.21 >More info COL-0-Ctrl--root root Original data
287 Fe starvation 24 h 0.57 >More info 0.21 >More info Control Original data GEO bulk
288 etiolated cop1BBX22-GFPox -0.54 >More info -0.23 >More info etiolated Col-0 whole seedlings Original data GEO bulk
289 whole roots -Fe 6 hour 0.59 >More info 0.18 >More info whole roots standard Original data GEO bulk
290 SAM SE agl15 agl18 double mutant -0.54 >More info -0.23 >More info SAM SE Col Original data GEO bulk
291 root cells cortex -Fe 0.51 >More info 0.26 >More info whole roots standard Original data GEO bulk
292 P35S:rGRF1 0.70 >More info 0.07 >More info Col-0 Original data GEO bulk
293 light -0.59 >More info -0.18 >More info dark light seedling Original data GEO bulk
294 pkl Mutant Uniconazole -0.68 >More info -0.09 >More info pkl Mutant mock Original data GEO bulk
295 pip3 At2g19270 TDNA 6h-5 0.70 >More info 0.07 >More info Col-0 whole plant Original data GEO bulk
296 2 hr Hypoxia Total RNA 0.65 >More info 0.11 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
297 root hypoxia p35S 0.64 >More info 0.12 >More info root hypoxia total hypoxia root Original data GEO bulk
298 low R/FR JA spray 0.24 >More info 0.52 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
299 phyB Rc50 0.26 >More info 0.50 >More info WT(Ler) Rc50 Original data GEO bulk
300 piffq FR 1h -0.71 >More info -0.04 >More info WT FR 1h whole seedling Original data GEO bulk
301 triploid female excess 0.57 >More info 0.18 >More info tetraploid Original data GEO bulk
302 low R/FR mock spray 0.19 >More info 0.56 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
303 12h volatiles Sm. R3089 -0.61 >More info -0.13 >More info 12h untreated whole seedling Original data GEO bulk
304 gun4-1 -0.63 >More info -0.11 >More info WT Col-0 seedling Original data GEO bulk
305 gun1-1 +lincomycin -0.61 >More info -0.13 >More info Col-0 +lincomycin Original data GEO bulk
306 root stele 40 mM NaCls 0.69 >More info 0.05 >More info root stele Original data GEO bulk
307 2h KNO3 Whole root -0.50 >More info -0.24 >More info 2h KCl control Whole root Whole root Original data GEO bulk
308 Root -P -0.67 >More info -0.06 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
309 Root dark control 24h 0.64 >More info 0.09 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
310 seedlings-week-old RECA1-overexpressing
transgenic		 0.55 >More info 0.18 >More info seedlings-week-old Col-0 seedlings Original data
311 WT Uniconazole -0.68 >More info -0.04 >More info WT mock Original data GEO bulk
312 whole roots 140 mM NaCl 30 minutes 0.56 >More info 0.16 >More info whole roots standard Original data GEO bulk
313 cop1 Seedling BL+ABA 0.55 >More info 0.17 >More info WT Seedling BL+ABA Original data GEO bulk
314 plant (Col-0) 4h OPDA 0.70 >More info 0.02 >More info plant (Col-0) 4h control Original data GEO bulk
315 ahg1-1 0.63 >More info 0.09 >More info ABA control Original data GEO bulk
316 WT(Ler) Rc15 -0.54 >More info -0.18 >More info WT(Ler) Dark Original data GEO bulk
317 stele pSHR 0h BL 0.64 >More info 0.08 >More info WR 35S 0h BL brassinosteroid root Original data
318 WT Rc50 -0.59 >More info -0.13 >More info WT Dark red light whole seedling Original data GEO bulk
319 10min Reillumination Total RNA -0.59 >More info -0.13 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
320 OPDA 4 h 0.70 >More info 0.02 >More info Col-0 Original data GEO bulk
321 slr-1 0h NAA 0.61 >More info 0.11 >More info Col-0 0h NAA Original data GEO bulk
322 root cells cortex 140mM NaCl 48 hours 0.56 >More info 0.15 >More info root cells cortex standard 1 hour root cells cortex Original data
323 Root -K 0.54 >More info 0.17 >More info Control-root Original data GEO bulk
324 root cells cortex 140mM NaCl 1 hour 0.50 >More info 0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
325 Cs root -0.60 >More info -0.11 >More info control root Original data GEO bulk
326 4C 1h 0.60 >More info 0.11 >More info 4C 0h Original data GEO bulk
327 Bay-0-1h IAA 0.18 >More info 0.53 >More info Bay-0-0h IAA whole plant Original data GEO bulk
328 Col-0 shade 0.19 >More info 0.52 >More info Col-0 light seedlings Original data GEO bulk
329 arr10 arr12 0.66 >More info 0.04 >More info DMSO--WT DMSO roots Original data GEO bulk
330 roottip control pWOL 0.54 >More info 0.16 >More info roottip control total control roottip Original data GEO bulk
331 K starvation (root) 0.54 >More info 0.16 >More info Ws (root) Original data GEO bulk
332 whole roots -Fe 3 hour 0.64 >More info 0.06 >More info whole roots standard Original data GEO bulk
333 Nicotinamide-49hr 0.60 >More info 0.10 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
334 17 2h total -0.57 >More info -0.13 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
335 Heat Recovery 24 h (root) 0.59 >More info 0.11 >More info Stress mock 24 h (root) Original data Stress treatments
336 chl1-12 10mM NH4NO3 -0.64 >More info -0.06 >More info col 10mM NH4NO3 Root Original data
337 Fe starvation 3 h 0.64 >More info 0.06 >More info Control Original data GEO bulk
338 T101D 10mM NH4NO3 -0.64 >More info -0.06 >More info col 10mM NH4NO3 Root Original data
339 Naphthyl- phthalamic acid 3 h 0.13 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
340 FHY3p dark+DEX -0.56 >More info -0.13 >More info FHY3p dark+mock Original data GEO bulk
341 root longitudinal zone-3 low sulfur 0.60 >More info 0.09 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
342 Mutant nph4-1_arf19-1 0.58 >More info 0.11 >More info Col Original data GEO bulk
343 FLIGHT TAGESB plate6 ROOTS 0.54 >More info 0.14 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
344 Prohexadione 12 h 0.53 >More info 0.15 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
345 Nicotinamide-73hr 0.50 >More info 0.18 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
346 piffq FR 3h -0.53 >More info -0.14 >More info WT FR 3h whole seedling Original data GEO bulk
347 jkd-4 QC 0.55 >More info 0.12 >More info Col-0 QC Quiescent Center Original data
348 Root dark control 7h 0.61 >More info 0.06 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
349 plant (tga2-5-6) 4h OPDA 0.60 >More info 0.07 >More info plant (tga2-5-6) 4h control Original data GEO bulk
350 ubc13A-es 0.59 >More info 0.08 >More info Col-es root Original data GEO bulk
351 AGL24 induced 0.50 >More info 0.16 >More info WT-ESTRADIOL Original data GEO bulk
352 whole roots 140 mM NaCl 4 hour 0.53 >More info 0.13 >More info whole roots standard Original data GEO bulk
353 mutant-line1135 0.56 >More info 0.10 >More info WT-control whole plant Original data GEO bulk
354 ddm1-12 0.56 >More info 0.10 >More info wt whole seedling Original data GEO bulk
355 root epidermis and lateral root cap 40 mM NaCl 0.55 >More info 0.11 >More info root epidermis and lateral root cap Original data GEO bulk
356 red illumination +lincomycin 0.14 >More info 0.52 >More info red illumination -lincomycin Original data GEO bulk
357 elf3-7-23ºC -0.57 >More info -0.09 >More info WT-23ºC Original data GEO bulk
358 gun1-9 norflurazon -0.61 >More info -0.04 >More info gun1-9 control Original data GEO bulk
359 afb3-1 2h KNO3 0.51 >More info 0.14 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
360 LTN005-2 TSA 0.53 >More info 0.12 >More info LTN012-2 Mock Original data
361 24h volatiles Sp. HRO-C48 0.50 >More info 0.15 >More info 24h untreated whole seedling Original data GEO bulk
362 Nicotinamide-65hr 0.51 >More info 0.14 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
363 ABA DFPM 0.54 >More info 0.11 >More info control Original data GEO bulk
364 KAN1-GR 60min 0.57 >More info 0.08 >More info KAN1-GR 0min Original data GEO bulk
365 17 2h unlabelled -0.55 >More info -0.09 >More info 27 1h unlabelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
366 bak1-3 +Pep2 10h 0.63 >More info 0.01 >More info WT +Pep2 10h Pep2 Original data GEO bulk
367 ERF115OE roottip5days -0.63 >More info 0.00 >More info Col-0 roottip5days root tips Original data
368 root cap pGL2 8h BL -0.51 >More info -0.12 >More info root cap pGL2 0h BL brassinosteroid root Original data
369 3d old, both 10mM sucrose and 0.2µM SMX -0.63 >More info -0.00 >More info control Whole seedling Original data GEO bulk
370 per1 in Pi deficiency medium 0.52 >More info 0.11 >More info Col in Pi deficiency medium root Original data GEO bulk
371 GST-overexpression seedlings control -0.55 >More info -0.08 >More info WT seedlings control Seedlings Original data
372 Stem tissue 2 days NAA 0.11 >More info 0.52 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
373 rgs1+mannitol -0.12 >More info -0.51 >More info WT+mannitol rosette leaves Original data GEO bulk
374 etiolated atbzip16 -0.57 >More info -0.06 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
375 intact root control -0.56 >More info -0.06 >More info Control for tissue data mock whole root Original data GEO bulk
376 chl1-9 10mM NH4NO3 -0.54 >More info -0.08 >More info col 10mM NH4NO3 Root Original data
377 root - 08% oxygen - 2h -0.53 >More info -0.09 >More info root - 21% oxygen - 2h Original data GEO bulk
378 WT Root-Pi -0.63 >More info 0.01 >More info WT Root+Pi roots Original data GEO bulk
379 Laer pretreat GA Flg22 1h -0.09 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
380 fri-flc -0.63 >More info 0.02 >More info WT Original data GEO bulk
381 Root GLU1-KO -0.50 >More info -0.11 >More info Root Col(0) roots Original data GEO bulk
382 sav1-1 light -0.51 >More info -0.09 >More info Col-0 light seedlings Original data GEO bulk
383 PRR5-VP 12h light on 0.72 >More info -0.12 >More info WT 12h light on whole plant Original data GEO bulk
384 FLIGHT BRIC G PDFU-112 seedlings 0.51 >More info 0.09 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
385 SA Treated 0.52 >More info 0.08 >More info Water Original data GEO bulk
386 toc1-1-93hr 0.62 >More info -0.02 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
387 Var2-1 roots 2hr KCl control -0.53 >More info -0.06 >More info Col0 roots 2hr KCl control root Original data GEO bulk
388 roots WT 0uM Fe 0.62 >More info -0.03 >More info roots WT 100uM Fe 0uM Fe roots Original data GEO bulk
389 arr10 arr12 tZ 0.51 >More info 0.07 >More info tZ trans-zeatin roots Original data GEO bulk
390 erf5 erf6 +chitooctaose -0.07 >More info -0.51 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
391 gis5 seedlings -0.66 >More info 0.09 >More info WT seedlings Whole seedlings (leaves + roots) Original data
392 Col -Fe 0.53 >More info 0.04 >More info Col-es root Original data GEO bulk
393 Root submergence 24h 0.56 >More info 0.01 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
394 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
395 Col-0 2HS 0.60 >More info -0.03 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
396 overexpresser LBD37 in -N 0.64 >More info -0.08 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
397 CMP 24hr 0.54 >More info 0.02 >More info Acetone 24hr root Original data GEO bulk
398 6h volatiles Sp. HRO-C48 -0.59 >More info 0.03 >More info 6h untreated whole seedling Original data GEO bulk
399 naxillin 3h -0.70 >More info 0.14 >More info before treatment naxillin root Original data GEO bulk
400 mutant acs2B (single mutant) -0.57 >More info 0.01 >More info col control (single mutant) Original data GEO bulk
401 mutant acs6E (single mutant) -0.71 >More info 0.16 >More info col control (single mutant) Original data GEO bulk
402 pip3 At2g19270 RNAi 32 0.67 >More info -0.13 >More info Nd-1 whole plant Original data GEO bulk
403 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.65 >More info -0.11 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
404 WT Root Hypoxia 0.55 >More info -0.01 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
405 Col BTH -0.13 >More info 0.67 >More info Col rosettes Original data GEO bulk
406 overexpresser LBD38 in -N 0.57 >More info -0.03 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
407 Roots Cd -0.70 >More info 0.16 >More info Roots control Cd Root Original data GEO bulk
408 ANOXIA 0.05 >More info -0.59 >More info ANOXIA+SUCROSE Original data GEO bulk
409 WT seedlings NaCl 0.56 >More info -0.03 >More info WT seedlings control Seedlings Original data GEO bulk
410 SQ8 roots 2hr KNO3 nitrogen -0.56 >More info 0.03 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
411 ein3 eil1 JA 0.66 >More info -0.13 >More info JA Whole seedling Original data GEO bulk
412 AtLysM RLK1 mutant chitooctaose 0.50 >More info 0.03 >More info WT chitooctaose Original data GEO bulk
413 10mM sucrose -0.53 >More info -0.00 >More info control Whole seedling Original data GEO bulk
414 piffq 3d WL -0.56 >More info 0.03 >More info WT 3d WL whole seedling Original data GEO bulk
415 etiolated cop1 -0.56 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
416 MPK6 ox Root Hypoxia 0.52 >More info -0.00 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
417 seed germinating in countinuous light 48 h SL -0.57 >More info 0.05 >More info Control for tissue data seed Original data GEO bulk
418 Anoxia 0.69 >More info -0.17 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
419 pip3 At2g19270 TDNA 9 0.59 >More info -0.08 >More info Col-0 whole plant Original data GEO bulk
420 Root sol2 0.53 >More info -0.02 >More info Root wt Original data GEO bulk
421 Kas -Fe 24h Roots -0.62 >More info 0.11 >More info Kas +Fe 24h Roots Original data GEO bulk
422 Col(gl) leaf 100mM NaCl -0.52 >More info 0.01 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
423 Kas-1 -Fe 24h -0.62 >More info 0.11 >More info Kas-1 +Fe 24h roots Original data GEO bulk
424 Col(gl) 100mM NaCl -0.52 >More info 0.01 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
425 tga1 tga4 2h KCl -0.55 >More info 0.05 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
426 pip3 At2g19270 RNAi 24 0.64 >More info -0.14 >More info Nd-1 whole plant Original data GEO bulk
427 Fenclorim 24hr 0.55 >More info -0.06 >More info Acetone 24hr root Original data GEO bulk
428 phr1 Root-Pi -0.56 >More info 0.07 >More info WT Root+Pi roots Original data GEO bulk
429 Nicotinamide-89hr 0.53 >More info -0.04 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
430 F1 hybrid submerged 0.50 >More info -0.01 >More info F1 hybrid air Original data GEO bulk
431 mbd4 mutant thaliana 10-day-old seedling -0.52 >More info 0.04 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
432 ein2 1% sucrose 14-day-old 0.72 >More info -0.24 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
433 Col in Pi deficiency medium -0.06 >More info 0.53 >More info Col in control medium root Original data GEO bulk
434 Heat and anoxia 0.50 >More info -0.03 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
435 toc1-1-89hr 0.70 >More info -0.23 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
436 ga1-3 SCL3OE 0.50 >More info -0.03 >More info ga1-3 whole root Original data
437 Control KNO3 roots - 8hours 0.56 >More info -0.10 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
438 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
439 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
440 siliques AtHb1 control -0.09 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
441 Mutant cry1 0.51 >More info -0.08 >More info Col-0 Original data GEO bulk
442 cry1 low light 0.51 >More info -0.08 >More info Col-O low light Original data GEO bulk
443 root - 04% oxygen - 2h -0.53 >More info 0.11 >More info root - 21% oxygen - 2h Original data GEO bulk
444 WT (Col) glucose -0.11 >More info 0.53 >More info WT (Col) glucose seedlings Original data GEO bulk
445 OE-HRA1 NS  -0.50 >More info 0.09 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
446 roots bhlh100/101 100uM Fe 0.50 >More info -0.09 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
447 Col0-PsmES4326-24hpi -0.21 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
448 Propiconazole 3 h 0.62 >More info -0.23 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
449 eto1-4 +370 0.59 >More info -0.20 >More info eto1-4 whole seedling Original data GEO bulk
450 WT 30μM phosphate 8 hours. -0.56 >More info 0.18 >More info WT control (not supplemented). Original data
451 ein2-1 +elf18 2h 0.61 >More info -0.23 >More info WT +elf18 2h elf18 Original data GEO bulk
452 WT 1mM phosphate 8 hours. 0.55 >More info -0.17 >More info WT control (not supplemented). Original data
453 Full C2 T3 -0.13 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
454 roots ethylene -0.56 >More info 0.19 >More info roots air Original data GEO bulk
455 ein2-1 untreated 0.65 >More info -0.28 >More info WT untreated untreated Original data GEO bulk
456 IAA7mII over-expressor IAA Treated -0.32 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
457 bri1-5 mutant -0.56 >More info 0.20 >More info WT 7 day-old whole seedlings Original data
458 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.59 >More info -0.24 >More info 2d dark-grown WT seedling Original data GEO bulk
459 SCR-GR Time 1H Dex 0.56 >More info -0.22 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
460 seedling 1.5h after Gamma atm-1 -0.54 >More info 0.20 >More info seedling day 1 unirradiated atm-1 1.5h Original data
461 Control KNO3 roots - 2days 0.50 >More info -0.16 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
462 scrm-D -0.62 >More info 0.29 >More info Col-0 WT whole seedling Original data GEO bulk
463 ein2-1 +elf18 10h 0.57 >More info -0.24 >More info WT +elf18 10h elf18 Original data GEO bulk
464 pif4pif5 mut dark 0.50 >More info -0.17 >More info WT dark Original data GEO bulk
465 ABA 0.5 h 0.55 >More info -0.23 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
466 eto1-4 -0.62 >More info 0.31 >More info Col-0 whole seedling Original data GEO bulk
467 Split KNO3 roots - 2hours 0.58 >More info -0.27 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
468 FAMA induced 48h -0.50 >More info 0.20 >More info control 48h Whole seedling Original data GEO bulk
469 WT in -N -0.53 >More info 0.24 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
470 4d red light grown hmr-22 seedlings 0.50 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
471 ACC 3 h -0.63 >More info 0.35 >More info Mock 3 h Original data Basic hormone treatment of seedlings
472 seedling 12h after HZE atm-1 -0.50 >More info 0.24 >More info seedling day 1 unirradiated atm-1 12h Original data
473 WT powdery mildew -0.50 >More info 0.24 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
474 WT 3H Cold 0.57 >More info -0.31 >More info WT control Original data GEO bulk
475 ein2-1 +Pep2 2h 0.55 >More info -0.30 >More info WT +Pep2 2h Pep2 Original data GEO bulk
476 t-zeatin 1 h 0.55 >More info -0.30 >More info Mock 1 h Original data Basic hormone treatment of seedlings
477 eds16 whole leaf 7d UI 0.30 >More info -0.55 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
478 Brassinolide 1 h (det2) 0.51 >More info -0.26 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
479 roots bhlh100/101 0uM Fe 0.53 >More info -0.30 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
480 mtf1-1 0.60 >More info -0.38 >More info Col0 root Original data
481 eto1-4 + AVG 0.58 >More info -0.36 >More info eto1-4 whole seedling Original data GEO bulk
482 35S::Zat12 -0.52 >More info 0.37 >More info WT Original data GEO bulk
483 2xX4x interploidy cross 0.36 >More info -0.50 >More info 2xX2x cross Original data GEO bulk
484 root longitudinal zone-2 -Fe 0.56 >More info -0.44 >More info root longitudinal zone-2 standard Original data GEO bulk
485 eto1-4 +393 0.57 >More info -0.48 >More info eto1-4 whole seedling Original data GEO bulk
486 root longitudinal zone-1 -Fe 0.58 >More info -0.60 >More info root longitudinal zone-1 standard Original data GEO bulk
487 D2O -0.53 >More info 0.53 >More info H2O seedling Original data GEO bulk