4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on roots bhlh100/101 100uM Fe
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List of experiments correlated with "roots bhlh100/101 100uM Fe"
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Score
Experiment
Correlation from
roots bhlh100/101 100uM Fe
Correlation to
roots bhlh100/101 100uM Fe
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
roots bhlh100/101 100uM Fe
1.00
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1.00
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roots WT 100uM Fe
100uM Fe
roots
Original data
GEO bulk
2
roots WT 0uM Fe
0.75
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0.67
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roots WT 100uM Fe
0uM Fe
roots
Original data
GEO bulk
3
iron minus 0 h
-0.55
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-0.52
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iron +0 h
root
Original data
GEO bulk
4
Whole root - low pH 3H
-0.37
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-0.66
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Whole root - Std pH 3H
pH 4.6 for 3 hr
Original data
GEO bulk
5
upb1-1 elongation zone
-0.41
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-0.60
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Col-0 elongation zone
Seedling root elongation zone
Original data
GEO bulk
6
afb3-1 2h KNO3
-0.43
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-0.54
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Ws 2h KNO3
2 hours of 5 mM KNO3
Arabidopsis root
Original data
GEO bulk
7
T101D 10mM NH4NO3
-0.46
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-0.51
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col 10mM NH4NO3
Root
Original data
8
6m.KCl
-0.55
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-0.39
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To.
KCl
14 day old Roots
Original data
GEO bulk
9
Whole root - low pH 1H
-0.35
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-0.58
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Whole root - Std pH 1H
pH 4.6 for 1 hr
Original data
GEO bulk
10
T101A 10mM NH4NO3
-0.50
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-0.41
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col 10mM NH4NO3
Root
Original data
11
3m.KCl
-0.50
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-0.40
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To.
KCl
14 day old Roots
Original data
GEO bulk
12
IRP1-OE-Fe--root
0.52
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0.37
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COL-0-Fe--root
root
Original data
13
seed germinating in countinuous light 24h SL
0.21
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0.67
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Control for tissue data
seed
Original data
GEO bulk
14
bri1-116
0.13
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0.73
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Col
seedling
Original data
GEO bulk
15
Heat shock optimum
0.21
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0.65
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Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
16
35S:VND7-VP16-GR+CHX
0.34
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0.51
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harboring empty vector+CHX
10mM cycloheximide (CHX) 6hrs
whole seedlings
Original data
GEO bulk
17
Whole root - low pH 6H
-0.28
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-0.56
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Whole root - Std pH 6H
pH 4.6 for 6 hr
Original data
GEO bulk
18
Prohexadione 3 h
-0.29
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-0.50
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Mock 3 h
Original data
Effect of GA inhibitors on seedlings
19
cngc1-3
0.51
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0.25
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Col-0
root
Original data
GEO bulk
20
TNT-seedlings
0.12
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0.64
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DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
21
Col BTH
0.05
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0.67
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Col
rosettes
Original data
GEO bulk
22
Laer pretreat GA Flg22 1h
0.00
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0.71
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Laer pretreat water control
leaf discs
Original data
GEO bulk
23
aux1 mutant roots air
-0.65
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-0.04
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roots IAA
Original data
GEO bulk
24
Control KNO3 roots - 8hours
-0.51
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-0.18
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Control KCl roots - 8hours
5mM KNO3 on both sides for 8 hours
roots
Original data
GEO bulk
25
35S::HRE2 Hypoxic
-0.54
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-0.14
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Col-0 wt Hypoxic
hypoxic treatment
Original data
GEO bulk
26
aux1 mutant roots ethylene
-0.13
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-0.54
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roots air
Original data
GEO bulk
27
Col0-PsmES4326-24hpi
0.06
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0.61
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Col0-mock-24hpi
leaf
Original data
GEO bulk
28
pft1 16C
-0.15
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-0.50
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WT 16C
seedling
Original data
GEO bulk
29
Leafminer damaged seedlings
0.08
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0.56
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Healthy seedlings
leaves
Original data
GEO bulk
30
siliques AtHb1 control
0.11
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0.52
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siliques WT control
control
silique
Original data
GEO bulk
31
SA 4mM
0.04
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-0.65
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untreated
4 weeks old at time of treatment
whole leaf
Original data
GEO bulk
32
-Sulfate 24 h
-0.55
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-0.04
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Mock 24 h (1500uM sulfate)
Original data
Response to sulfate limitation
33
Shoot apex inflorescence (after bolting)
-0.07
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0.65
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Control for tissue data
Original data
Developmental series; organs / tissues at different ages
34
root longitudinal zone-2 pH 4.6
-0.05
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-0.52
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root longitudinal zone-2 pH 5.7
Original data
GEO bulk
35
35S::HRE1 Aerobic
0.52
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0.04
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Col-0 wt Aerobic
untreated control
Original data
GEO bulk
36
sfr3 warm
0.03
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0.52
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WT-warm
aerial tissues
Original data
GEO bulk
37
IAA 12h
0.53
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-0.01
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control 12h
root
Original data
GEO bulk
38
CCA1-ox 6am non-polysomal
-0.04
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0.51
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WT 6am non-polysomal
aerial part
Original data
39
PNO8 3 h
-0.10
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0.55
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Mock 3 h
Original data
Effect of other inhibitors on seedlings
40
Chemically
-0.09
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0.50
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Solvent
treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid
whole seedlings
Original data
41
Dry pre-dawn
0.10
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-0.50
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Wet pre-dawn
water-limited
whole rosette
Original data
GEO bulk
42
IAA7mII over-expressor IAA Treated
-0.29
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0.69
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empty vector IAA Treated
Original data
GEO bulk
43
CeO2 germinant
0.36
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-0.60
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Millipore Water germinant
CeO2
seedling
Original data