4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on CeO2 germinant
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List of experiments correlated with "CeO2 germinant"  Help Download transcriptome of top 30
Score Experiment Correlation from
CeO2 germinant		 Correlation to
CeO2 germinant		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 CeO2 germinant 1.00 >More info 1.00 >More info Millipore Water germinant CeO2 seedling Original data
2 KCl germinant 0.91 >More info 0.67 >More info Millipore Water germinant KCl seedling Original data
3 AgNO3 3 h -0.79 >More info -0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
4 TNT-seedlings -0.76 >More info -0.73 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
5 Col-0 V. longisporum-inoculated 48 hpi -0.79 >More info -0.69 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
6 P.p 2.5hai -0.79 >More info -0.66 >More info At-Control roots Original data GEO bulk
7 Col upon hypoxia 6 hrs -0.78 >More info -0.66 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
8 P.p 6hai -0.77 >More info -0.65 >More info At-Control roots Original data GEO bulk
9 TiO2 germinant 0.87 >More info 0.53 >More info Millipore Water germinant TiO2 seedling Original data
10 root - 01% oxygen - 2h -0.56 >More info -0.80 >More info root - 21% oxygen - 2h Original data GEO bulk
11 Col-0 wt Hypoxic -0.67 >More info -0.69 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
12 roottip hypoxia total -0.65 >More info -0.70 >More info roottip control total Original data GEO bulk
13 hrpA fliC 7h -0.72 >More info -0.62 >More info Mock 7h hrpA fliC Original data GEO bulk
14 seedlings-week-old RECA1-overexpressing
transgenic		 -0.75 >More info -0.59 >More info seedlings-week-old Col-0 seedlings Original data
15 P.p 10.5hai -0.77 >More info -0.56 >More info At-Control roots Original data GEO bulk
16 Col-0 low oxygen -0.76 >More info -0.54 >More info Col-0 control low oxygen root Original data GEO bulk
17 ani1 T16 0.79 >More info 0.51 >More info WT T16 root tissue Original data GEO bulk
18 seedlings protease IV -0.75 >More info -0.54 >More info seedlings nontreated control whole seedling Original data
19 root Dosed gold -0.74 >More info -0.55 >More info root No gold .125 mM gold 24 h roots Original data
20 5-Triiodobenzoic acid3 h -0.71 >More info -0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
21 0.125 mM gold 24 h -0.74 >More info -0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
22 toc1-1-53hr -0.66 >More info -0.61 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
23 chito-tetramer -0.69 >More info -0.56 >More info Col Mock Original data GEO bulk
24 root hypoxia total -0.64 >More info -0.61 >More info root control total Original data GEO bulk
25 Col ozone 3h -0.63 >More info -0.62 >More info Col clean-air 3h ozone Original data GEO bulk
26 Chemically -0.60 >More info -0.65 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
27 toc1-1-85hr -0.63 >More info -0.61 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
28 col-5 hrpA 12h -0.77 >More info -0.47 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
29 P.p 30hai -0.73 >More info -0.51 >More info At-Control roots Original data GEO bulk
30 chito-octamer -0.68 >More info -0.55 >More info Col Mock Original data GEO bulk
31 2 hr Hypoxia Total RNA -0.65 >More info -0.58 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
32 chl1-12 10mM NH4NO3 0.68 >More info 0.55 >More info col 10mM NH4NO3 Root Original data
33 WT chitooctaose -0.69 >More info -0.54 >More info WT water Original data GEO bulk
34 MPK6 ox Shoot Hypoxia -0.56 >More info -0.67 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
35 WT+chitooctaose -0.61 >More info -0.62 >More info WT+water chitooctaose seedlings Original data GEO bulk
36 Col-0 2HS -0.60 >More info -0.61 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
37 ani1 T0.5 0.70 >More info 0.51 >More info WT T0.5 root tissue Original data GEO bulk
38 whole roots -Fe 72 hour -0.76 >More info -0.45 >More info whole roots standard Original data GEO bulk
39 WT 2-4h Xanthomonas -0.63 >More info -0.58 >More info WT T0 Original data GEO bulk
40 ein2-1 9 hpi A. brassicicola -0.67 >More info -0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
41 Fe starvation 72 h -0.76 >More info -0.45 >More info Control Original data GEO bulk
42 T101A 10mM NH4NO3 0.70 >More info 0.51 >More info col 10mM NH4NO3 Root Original data
43 coi1-2 -0.68 >More info -0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
44 chl1-5 10mM NH4NO3 0.66 >More info 0.54 >More info col 10mM NH4NO3 Root Original data
45 atmyc2 cop1 Seedling Dark -0.73 >More info -0.47 >More info WT Seedling Dark Original data GEO bulk
46 whole roots -Fe 48 hour -0.77 >More info -0.43 >More info whole roots standard Original data GEO bulk
47 WT Shoot Hypoxia -0.51 >More info -0.69 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
48 B.cinerea 18 h infection -0.63 >More info -0.57 >More info Mock 18 h Original data Botrytis cinerea infection
49 Botrytis cinerea 18h -0.63 >More info -0.57 >More info control 18h Original data GEO bulk
50 toc1-1-65hr -0.66 >More info -0.53 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
51 bak1-3 +Pep2 10h -0.71 >More info -0.48 >More info WT +Pep2 10h Pep2 Original data GEO bulk
52 DFPM -0.73 >More info -0.46 >More info control Original data GEO bulk
53 dde2-2 9 hpi A. brassicicola -0.67 >More info -0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
54 IAA/inhibitor B Treated -0.59 >More info -0.59 >More info IAA Treated Original data GEO bulk
55 Light -0.51 >More info -0.66 >More info Control Original data GEO bulk
56 oas-a1.1 Cd 18h -0.66 >More info -0.51 >More info Cd 18h root Root Original data GEO bulk
57 WT-NOCO2 INFECTED -0.76 >More info -0.41 >More info WT-MOCK Original data GEO bulk
58 sid2-2 9 hpi A. brassicicola -0.71 >More info -0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
59 pepr1-1 Pepr2-3 +Pep2 2h 0.68 >More info 0.48 >More info WT +Pep2 2h Pep2 Original data GEO bulk
60 del1-1 mutant 5d uninfected -0.58 >More info -0.58 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
61 bbx24 in Simulated Shade 0.69 >More info 0.47 >More info WT in simulated shade shade seedling Original data
62 pepr1-1 Pepr2-3 +Pep2 10h 0.73 >More info 0.43 >More info WT +Pep2 10h Pep2 Original data GEO bulk
63 Col-0 9 hpi A. brassicicola -0.71 >More info -0.45 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
64 ARR22-ox (t-zeatin 3 h) -0.73 >More info -0.43 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
65 Cor hrpS 10h -0.58 >More info -0.56 >More info Mock 10h Cor hrpS Original data GEO bulk
66 R. solani AG8 -0.68 >More info -0.46 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
67 toc1-1-81hr -0.63 >More info -0.51 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
68 GST NPP1 4 h (leaf) -0.69 >More info -0.45 >More info Mock 4 h (leaf) Original data Elicitor treatments
69 root epidermis and lateral root cap pH4.6 -0.71 >More info -0.43 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
70 Chitosan 3h Treatment -0.67 >More info -0.46 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
71 arf2 mock -0.71 >More info -0.42 >More info Col mock Original data GEO bulk
72 9 hr Hypoxia 1 hr recovery Total RNA -0.65 >More info -0.48 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
73 Mutant arf2 (etiol) -0.71 >More info -0.42 >More info Col (etiol) Original data GEO bulk
74 whole roots -Fe 6 hour -0.60 >More info -0.52 >More info whole roots standard Original data GEO bulk
75 Ibuprofen 3 h -0.58 >More info -0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
76 Cycloheximide 3 h -0.72 >More info -0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
77 9 hr Hypoxia Total RNA -0.67 >More info -0.45 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
78 oligomycin 4 h -0.73 >More info -0.38 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
79 toc1-1-49hr -0.62 >More info -0.49 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
80 Selenate (root) -0.60 >More info -0.51 >More info Ws (root) Original data GEO bulk
81 Root Selenate -0.60 >More info -0.51 >More info Root control 40 micromolar selenate Root Original data GEO bulk
82 IAA 0h 0.69 >More info 0.42 >More info control 0h root Original data GEO bulk
83 hrpA 7h -0.69 >More info -0.42 >More info Mock 7h hrpA Original data GEO bulk
84 toc1-1-57hr -0.59 >More info -0.52 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
85 AvrRpm1 2 h (leaf) -0.65 >More info -0.45 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
86 chl1-9 10mM NH4NO3 0.63 >More info 0.47 >More info col 10mM NH4NO3 Root Original data
87 E.coli TUV86 2 fliC 7h -0.71 >More info -0.39 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
88 Root dark control 24h -0.72 >More info -0.38 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
89 9m.KCl -0.60 >More info -0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
90 Whole root - low pH 12H -0.72 >More info -0.38 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
91 Phytoprostane A1 4 h -0.62 >More info -0.47 >More info Col-0 Original data GEO bulk
92 pnp1-1 1wk -P -0.60 >More info -0.49 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
93 vtc2-1 0.58 >More info 0.51 >More info Col-0 whole plant Original data GEO bulk
94 IRP1-OE-Fe--shoot -0.62 >More info -0.47 >More info COL-0-Fe--shoot shoot Original data
95 col-5 hrpA 4h -0.60 >More info -0.48 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
96 Col-0 Root 100 mM ATP 30 min -0.64 >More info -0.44 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
97 Mutant axr3-1 (IAA) -0.52 >More info -0.56 >More info Col (IAA) Original data GEO bulk
98 SA -0.60 >More info -0.48 >More info WT mock Whole seedling Original data GEO bulk
99 CMP 4hr -0.71 >More info -0.37 >More info Acetone 4hr root Original data GEO bulk
100 Root submergence 24h -0.71 >More info -0.37 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
101 Col whole leaf 7dpi -0.63 >More info -0.45 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
102 plant (tga2-5-6) 4h phytoprostane A1 -0.69 >More info -0.39 >More info plant (tga2-5-6) 4h control Original data GEO bulk
103 WT flg22 1h -0.68 >More info -0.40 >More info WT 0h Leaf tissue Original data GEO bulk
104 efr-1 +elf18 10h 0.74 >More info 0.34 >More info WT +elf18 10h elf18 Original data GEO bulk
105 T101D 10mM NH4NO3 0.63 >More info 0.45 >More info col 10mM NH4NO3 Root Original data
106 Nicotinamide-73hr -0.65 >More info -0.43 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
107 Phaseolicola 2 h (leaf) -0.56 >More info -0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
108 miR393 0h 0.49 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
109 WT +elf18 2h -0.76 >More info -0.30 >More info WT untreated elf18 Original data GEO bulk
110 9 hr Hypoxia IP RNA -0.67 >More info -0.39 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
111 Dex-rga(delta17) 4h GA4+DEX 0.72 >More info 0.34 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
112 Fenclorim 4hr -0.70 >More info -0.36 >More info Acetone 4hr root Original data GEO bulk
113 til1-1 22C -0.65 >More info -0.41 >More info Col-0 22C Original data GEO bulk
114 WT 30μM arsenate 8 hours. -0.67 >More info -0.39 >More info WT control (not supplemented). Original data
115 bri1-116 0.33 >More info 0.73 >More info Col seedling Original data GEO bulk
116 cpctry -0.49 >More info -0.57 >More info Col Original data GEO bulk
117 WT NAA/flg 1h -0.67 >More info -0.38 >More info WT 0h Leaf tissue Original data GEO bulk
118 9m.KNO3 -0.64 >More info -0.41 >More info To. KNO3 14 day old Roots Original data GEO bulk
119 LTN008-2 aza-dc -0.72 >More info -0.33 >More info LTN012-2 Mock Original data
120 coi1-16 ein2 sid2 ctrl 0.71 >More info 0.34 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
121 Nicotinamide-85hr -0.57 >More info -0.48 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
122 wavy -0.69 >More info -0.36 >More info WT Original data GEO bulk
123 SCR-GR Time 1H Dex -0.69 >More info -0.36 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
124 coi1-16 ein2 sid2 ozone -0.69 >More info -0.36 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
125 Col-0 Flg22 4h -0.54 >More info -0.50 >More info Col-0 H2O 4h Original data GEO bulk
126 PNO8 3 h -0.68 >More info -0.36 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
127 toc1-1-73hr -0.63 >More info -0.41 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
128 Laer Flg22+GA 1h -0.70 >More info -0.34 >More info Laer Control leaf discs Original data GEO bulk
129 WT flg22 2h -0.71 >More info -0.33 >More info WT 0h Leaf tissue Original data GEO bulk
130 AFB1 flg22 1h -0.65 >More info -0.39 >More info WT 0h Leaf tissue Original data GEO bulk
131 S15-118 -0.43 >More info -0.61 >More info wt Original data GEO bulk
132 Laer Flg22 1h -0.72 >More info -0.31 >More info Laer Control leaf discs Original data GEO bulk
133 msh1 albino -0.66 >More info -0.37 >More info WT aerial part Original data GEO bulk
134 WT+H2O2 -0.56 >More info -0.47 >More info WT H2O2 Original data GEO bulk
135 miR393 flg22 1h -0.64 >More info -0.39 >More info WT 0h Leaf tissue Original data GEO bulk
136 C24 ozone -0.71 >More info -0.32 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
137 toc1-1-69hr -0.65 >More info -0.38 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
138 Col-0 ozone -0.71 >More info -0.32 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
139 Laer Flg22 2h -0.72 >More info -0.31 >More info Laer Control leaf discs Original data GEO bulk
140 MPK6 ox Root Hypoxia -0.51 >More info -0.52 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
141 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.71 >More info -0.31 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
142 root cells endodermis 140mM NaCl 3 hours -0.69 >More info -0.33 >More info root cells endodermis standard 1 hour root cells endodermis Original data
143 Nicotinamide-81hr -0.64 >More info -0.38 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
144 Nicotinamide-61hr -0.59 >More info -0.43 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
145 AFB1 flg22 2h -0.69 >More info -0.33 >More info WT 0h Leaf tissue Original data GEO bulk
146 root cells endodermis 140mM NaCl 8 hours -0.70 >More info -0.32 >More info root cells endodermis standard 1 hour root cells endodermis Original data
147 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.72 >More info -0.30 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
148 Nicotinamide-65hr -0.63 >More info -0.39 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
149 IMI 4mM -0.61 >More info -0.41 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
150 WT seedlings MV -0.55 >More info -0.46 >More info WT seedlings control Seedlings Original data GEO bulk
151 root columella root cap -S 0.59 >More info 0.42 >More info root columella root cap pH5.7 Original data GEO bulk
152 WT Bc inoculation 14h -0.70 >More info -0.31 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
153 Root dark control 7h -0.68 >More info -0.33 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
154 Dex-rga(delta17) 2h GA4+DEX 0.70 >More info 0.31 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
155 Mutant siz1-3 -0.60 >More info -0.41 >More info Col-0 Original data GEO bulk
156 (Col-0)+100 uM As -0.55 >More info -0.46 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
157 siz1-3 control -0.60 >More info -0.41 >More info Col-0 control Original data GEO bulk
158 col-5 DC3000-avrRpm 4h -0.62 >More info -0.39 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
159 Tsu -Fe 24h Roots -0.58 >More info -0.43 >More info Tsu +Fe 24h Roots Original data GEO bulk
160 Tsu-1 -Fe 24h -0.58 >More info -0.43 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
161 15m.KCl -0.59 >More info -0.42 >More info To. KCl 14 day old Roots Original data GEO bulk
162 E.coli 0157 H7 7h -0.66 >More info -0.34 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
163 R. solani AG2-1 -0.58 >More info -0.42 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
164 Nicotinamide-53hr -0.62 >More info -0.38 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
165 Te ozone -0.69 >More info -0.31 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
166 (Col-0)+200 uM As -0.55 >More info -0.45 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
167 tor mutant glucose -0.75 >More info -0.25 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
168 Mutant axr3-1 -0.48 >More info -0.52 >More info Col Original data GEO bulk
169 cpr5scv1 -0.66 >More info -0.33 >More info WT(COL) Original data GEO bulk
170 IAA 0.5 h -0.50 >More info -0.49 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
171 WT Red light 1h -0.73 >More info -0.26 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
172 protoplasts T2 [flg22] -0.53 >More info -0.45 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
173 toc1-1-77hr -0.75 >More info -0.23 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
174 rhd2 -0.51 >More info -0.47 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
175 anac017-2 AntimycinA 3h 0.64 >More info 0.34 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
176 Ts5 roots 2hr KCl control -0.62 >More info -0.36 >More info Col0 roots 2hr KCl control root Original data GEO bulk
177 GV3101 6dpi -0.62 >More info -0.36 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
178 Col whole leaf 5dpi -0.55 >More info -0.43 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
179 P35S:rGRF3 -0.66 >More info -0.32 >More info WS Original data GEO bulk
180 WT AntimycinA 3h -0.59 >More info -0.39 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
181 WT Root Hypoxia -0.29 >More info -0.69 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
182 4C 1h -0.48 >More info -0.50 >More info 4C 0h Original data GEO bulk
183 afb3-1 2h KNO3 -0.50 >More info -0.47 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
184 IAA/inhibitor A Treated -0.54 >More info -0.43 >More info IAA Treated Original data GEO bulk
185 seedlings +5AC -0.67 >More info -0.30 >More info control seedlings 10-day old whole seedling Original data GEO bulk
186 hira-root 0.60 >More info 0.37 >More info WT-root root Original data
187 camta1/3 warm -0.50 >More info -0.47 >More info WT warm entire aerial part Original data GEO bulk
188 hrcC -0.64 >More info -0.33 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
189 root cells endodermis 140mM NaCl 48 hours -0.58 >More info -0.39 >More info root cells endodermis standard 1 hour root cells endodermis Original data
190 oligomycin 1 h -0.66 >More info -0.31 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
191 Col-Luc WT 3h antimycin A -0.64 >More info -0.33 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
192 Dex-rga(delta17) 4h GA4 0.58 >More info 0.38 >More info Vector 4h GA4 shoots Original data GEO bulk
193 CT101 ozone -0.70 >More info -0.26 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
194 albino Ds13-2198-1 0.58 >More info 0.38 >More info control Original data GEO bulk
195 miR393 flg22 2h -0.66 >More info -0.30 >More info WT 0h Leaf tissue Original data GEO bulk
196 Mutant siz1-3 (Drought) -0.60 >More info -0.36 >More info Col-0 (Drought) Original data GEO bulk
197 Ba1 UV -0.66 >More info -0.30 >More info Ba1 mock UV seedling Original data
198 siz1-3 drought -0.60 >More info -0.36 >More info Col-0 drought Original data GEO bulk
199 ataf1-1 mutant Col-0 Bgh inoculated -0.62 >More info -0.34 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
200 glk1 glk2 GLK1-GR +DEX 24h 0.76 >More info 0.20 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
201 Lipopolysaccaride4 h (leaf) -0.55 >More info -0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
202 Nicotinamide-57hr -0.62 >More info -0.34 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
203 AtLysM RLK1 mutant chitooctaose 0.45 >More info 0.51 >More info WT chitooctaose Original data GEO bulk
204 CMP 24hr -0.68 >More info -0.27 >More info Acetone 24hr root Original data GEO bulk
205 pip3 At2g19270 TDNA 9 -0.62 >More info -0.33 >More info Col-0 whole plant Original data GEO bulk
206 Col-0 under 4 days salt -0.62 >More info -0.33 >More info Col-0 under control 4 days salt treatment rosette Original data
207 WT NAA/flg 2h -0.69 >More info -0.26 >More info WT 0h Leaf tissue Original data GEO bulk
208 smg7b-1 -0.53 >More info -0.42 >More info WT whole plant Original data GEO bulk
209 bio4-1 mutant watered00µM biotin leaves 0.62 >More info 0.33 >More info bio4-1 mutant leaves leaves Original data GEO bulk
210 WT powdery mildew -0.51 >More info -0.44 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
211 MG132 3 h -0.54 >More info -0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
212 toc1-1-61hr -0.54 >More info -0.40 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
213 Root -Cs -0.62 >More info -0.32 >More info Control-root Original data GEO bulk
214 Shoot -Cs -0.51 >More info -0.43 >More info Control-shoot Original data GEO bulk
215 root hypoxia pPEP -0.57 >More info -0.37 >More info root hypoxia total hypoxia root Original data GEO bulk
216 Laer Flg22+GA 2h -0.69 >More info -0.25 >More info Laer Control leaf discs Original data GEO bulk
217 (Ws-2)+100 uM As -0.62 >More info -0.32 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
218 shoots WT 0uM Fe -0.60 >More info -0.34 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
219 inhibitor A Treated -0.51 >More info -0.43 >More info Negative Control Original data GEO bulk
220 2hr transitory KNO3 PrR cell -0.33 >More info -0.61 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
221 cs26 long day -0.53 >More info -0.40 >More info Leaves-WT-LD leaf Original data GEO bulk
222 safener treated -0.54 >More info -0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
223 9 hr Hypoxia 1 hr recovery IP RNA -0.55 >More info -0.38 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
224 wrky33 Bc inoculation 14h -0.71 >More info -0.22 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
225 ckh1 CK200 -0.58 >More info -0.35 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
226 K starvation (root) -0.58 >More info -0.35 >More info Ws (root) Original data GEO bulk
227 pvip1 pvip2 -0.70 >More info -0.23 >More info Col-0 whole rosettes Original data GEO bulk
228 2 hr Hypoxia IP RNA -0.53 >More info -0.39 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
229 root cells cortex 140mM NaCl 3 hours -0.67 >More info -0.25 >More info root cells cortex standard 1 hour root cells cortex Original data
230 Root submergence 7h -0.67 >More info -0.25 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
231 Infected pft1 leaf -0.39 >More info -0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
232 pmr5 pmr6 -0.58 >More info -0.34 >More info Col-0 Original data GEO bulk
233 CAX1/CAX3 mutant -0.63 >More info -0.29 >More info Col whole plant Original data GEO bulk
234 10min Reillumination Total RNA 0.69 >More info 0.23 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
235 Root -K -0.58 >More info -0.34 >More info Control-root Original data GEO bulk
236 HRE1-RNAi20 normoxia 0.61 >More info 0.31 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
237 NFA8 roots 2hr KCl control -0.58 >More info -0.34 >More info Col0 roots 2hr KCl control root Original data GEO bulk
238 amiRAP aerobic 0.32 >More info 0.60 >More info WT aerobic aerobic Original data GEO bulk
239 UV Stress 24 h (shoot) -0.51 >More info -0.40 >More info Stress mock 24 h (shoot) Original data Stress treatments
240 Bur-0-30min IAA -0.55 >More info -0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
241 CMV-WT -0.59 >More info -0.32 >More info Mock-At Aerial tissues Original data GEO bulk
242 ahg2-1sid2-2 -0.60 >More info -0.31 >More info WT (Col) control Original data GEO bulk
243 elevated CO2 high Mg root 0.60 >More info 0.31 >More info atmospheric CO2 high Mg root Root Original data
244 Col-0 INA 6d -0.60 >More info -0.31 >More info Col-0 MOCK 6d Original data GEO bulk
245 edr1 18 h powdery mildew -0.56 >More info -0.34 >More info Col-0 18 h powdery mildew Original data GEO bulk
246 Kas2 roots 2hr KNO3 nitrogen -0.64 >More info -0.26 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
247 ORS1 induced -0.62 >More info -0.28 >More info mock-induced rosette leaves Original data GEO bulk
248 shoots bhlh100/101 0uM Fe -0.64 >More info -0.26 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
249 tunicamycin 0.61 >More info 0.29 >More info DMF Original data GEO bulk
250 bio4-1 mutant leaves -0.61 >More info -0.29 >More info WT leaves leaves Original data GEO bulk
251 Whole root - low pH 24H -0.67 >More info -0.22 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
252 camta1/2/3 24h cold -0.54 >More info -0.35 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
253 root cells epidermis 140mM NaCl 48 hours -0.52 >More info -0.37 >More info root cells epidermis standard 1 hour root cells epidermis Original data
254 gai Control -0.67 >More info -0.22 >More info Laer Control leaf discs Original data GEO bulk
255 root stele pH4.6 -0.64 >More info -0.25 >More info root stele pH5.7 Original data GEO bulk
256 pif3 Dark 0h 0.66 >More info 0.23 >More info WT Dark 0h etiolated seedling Original data GEO bulk
257 FLIGHT TAGESB plate6 ROOTS -0.53 >More info -0.36 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
258 KAN1-GR 30min -0.68 >More info -0.21 >More info KAN1-GR 0min Original data GEO bulk
259 P.syringae AvrRpt2 4 h (leaf) -0.39 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
260 shoot hypoxia total -0.21 >More info -0.68 >More info shoot control total Original data GEO bulk
261 Aerobic prt6 -0.16 >More info -0.73 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
262 C24-1h IAA -0.71 >More info -0.18 >More info C24-0h IAA whole plant Original data GEO bulk
263 4d red light grown hmr-5 seedlings -0.69 >More info -0.20 >More info 4d red light grown WT(Col-0) seedlings Original data
264 root cells cortex 140mM NaCl 48 hours -0.54 >More info -0.34 >More info root cells cortex standard 1 hour root cells cortex Original data
265 cpr5 -0.56 >More info -0.32 >More info WT seedling Original data GEO bulk
266 arf2 brz 0.55 >More info 0.33 >More info arf2 mock Original data GEO bulk
267 camta3-1 -0.52 >More info -0.36 >More info WT Original data GEO bulk
268 whole roots 140 mM NaCl 1 hour -0.64 >More info -0.24 >More info whole roots standard Original data GEO bulk
269 Col leaves 48h LT -0.61 >More info -0.27 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
270 whole roots -Fe 12 hour -0.65 >More info -0.23 >More info whole roots standard Original data GEO bulk
271 Cocultivation 8 hrs root -0.62 >More info -0.26 >More info Mock cocultivation 8 hrs root Root Original data
272 35S:PCO1 hypoxia 0.25 >More info 0.63 >More info WT hypoxia whole rosette Original data
273 WT-Dry -0.36 >More info -0.52 >More info WT-CK dehydration treatment 1h Original data
274 vtc1 (II) -0.59 >More info -0.29 >More info Col (II) rosette Original data GEO bulk
275 ALC Toc1 light-light Mock 0.68 >More info 0.19 >More info Col light-light Mock no ethanol Original data GEO bulk
276 cop1 Seedling BL+ABA -0.54 >More info -0.33 >More info WT Seedling BL+ABA Original data GEO bulk
277 35S:RPS4 eds1-2 8h 0.55 >More info 0.32 >More info 35S:RPS4 8h leaves Original data
278 Var2-1 roots 2hr KNO3 nitrogen -0.53 >More info -0.34 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
279 AFB1 0h -0.62 >More info -0.25 >More info Col 0h Leaf Original data GEO bulk
280 WT +elf18 10h -0.66 >More info -0.21 >More info WT untreated elf18 Original data GEO bulk
281 Botrytis cinerea 48h -0.62 >More info -0.25 >More info control 48h Original data GEO bulk
282 root cells cortex 140mM NaCl 8 hours -0.62 >More info -0.25 >More info root cells cortex standard 1 hour root cells cortex Original data
283 cpr5npr1svi1 -0.59 >More info -0.28 >More info WT(COL) Original data GEO bulk
284 Root GLU1-KO 0.59 >More info 0.28 >More info Root Col(0) roots Original data GEO bulk
285 col-5 DC3000 12h -0.73 >More info -0.14 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
286 20d after anthesis -0.57 >More info -0.30 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
287 WT NAA 1h -0.55 >More info -0.31 >More info WT 0h Leaf tissue Original data GEO bulk
288 Elevated CO2 AMPLE N NIGHT -0.56 >More info -0.30 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
289 sid2-1 cold 0.55 >More info 0.31 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
290 seedlings + TSA -0.54 >More info -0.32 >More info control seedlings 10-day old whole seedling Original data GEO bulk
291 mkk1/mkk2 control rep -0.56 >More info -0.30 >More info Col-0 Time 0 rep Original data GEO bulk
292 Col-0-avrB-6h -0.54 >More info -0.32 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
293 vtc2 (I) -0.59 >More info -0.27 >More info Col (I) rosette Original data GEO bulk
294 col-5 DC3000 4h -0.50 >More info -0.36 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
295 35S::ERF104 Flg22 4h -0.64 >More info -0.22 >More info 35S::ERF104 H2O 4h Original data GEO bulk
296 root cells epidermis 140mM NaCl 3 hours -0.55 >More info -0.30 >More info root cells epidermis standard 1 hour root cells epidermis Original data
297 15m.KNO3 -0.55 >More info -0.30 >More info To. KNO3 14 day old Roots Original data GEO bulk
298 csn5 (csn5a-2 csn5b) light -0.52 >More info -0.33 >More info WT light Original data GEO bulk
299 WT Col-0 Bgh inoculated -0.54 >More info -0.31 >More info WT Col-0 Un-inoculated Original data GEO bulk
300 Leafminer locally damaged thaliana seedlings -0.64 >More info -0.21 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
301 cdkf:1-2 -0.64 >More info -0.21 >More info wt seedling young seedlings Original data GEO bulk
302 Mutant arf19-1 (IAA) 0.61 >More info 0.24 >More info Col (IAA) Original data GEO bulk
303 Nicotinamide-69hr -0.63 >More info -0.22 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
304 msg2 0.57 >More info 0.28 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
305 root cells stele 140mM NaCl 3 hours -0.63 >More info -0.22 >More info root cells stele standard 1 hour root cells stele Original data
306 abi4-102 (II) -0.56 >More info -0.28 >More info Col (II) rosette Original data GEO bulk
307 +1.6 mM Tween 20 1 h. -0.54 >More info -0.30 >More info +distilled water 1 h. Original data GEO bulk
308 Octopus overexpressor 35SDYG25 -0.52 >More info -0.32 >More info WS Original data GEO bulk
309 Propiconazole 3 h -0.51 >More info -0.33 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
310 GST 4 h (leaf) -0.53 >More info -0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
311 Flagellin 4 h (leaf) -0.57 >More info -0.27 >More info Mock 4 h (leaf) Original data Elicitor treatments
312 CLO 4mM -0.50 >More info -0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
313 DC3000 2 h (leaf) -0.54 >More info -0.29 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
314 Mutant arf19-1 0.56 >More info 0.27 >More info Col Original data GEO bulk
315 Stem tissue 5 days NAA -0.51 >More info -0.32 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
316 mpk6-ko Flg22 4h -0.52 >More info -0.31 >More info mpk6-ko H2O 4h Original data GEO bulk
317 DC3000 hrcC 2 h (leaf) -0.52 >More info -0.31 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
318 0.2µM SMX 0.15 >More info 0.68 >More info control Whole seedling Original data GEO bulk
319 npr1-1 SA 0.59 >More info 0.24 >More info Col-0 SA complete seedling Original data
320 atmospheric CO2 high Mg root 0.61 >More info 0.22 >More info atmospheric CO2 normal Mg root Root Original data
321 Nicotinamide-49hr -0.59 >More info -0.24 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
322 Col-0 overexpressing At1g54160 control -0.57 >More info -0.26 >More info WT no treatement Original data GEO bulk
323 At1g54160 ox -0.57 >More info -0.26 >More info Col-0 Original data GEO bulk
324 Bur-0-1h IAA -0.57 >More info -0.26 >More info Bur-0h IAA whole plant Original data GEO bulk
325 irradiated leaf (cmt 5d) -0.51 >More info -0.31 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
326 root cells endodermis 140mM NaCl 20 hours -0.55 >More info -0.27 >More info root cells endodermis standard 1 hour root cells endodermis Original data
327 root protoplasts 40 mM NaCl -0.54 >More info -0.28 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
328 35S::PI ap3-3 35S::AP-GR +DEX -0.56 >More info -0.26 >More info 0hr DEX Original data GEO bulk
329 24h +Pi 0.64 >More info 0.18 >More info 24h -Pi root Original data GEO bulk
330 camta1/2/3 warm -0.53 >More info -0.29 >More info WT warm entire aerial part Original data GEO bulk
331 10mM sucrose 0.53 >More info 0.29 >More info control Whole seedling Original data GEO bulk
332 mkk1/mkk2 24h BTH rep -0.55 >More info -0.27 >More info Col-0 24h BTH rep Original data GEO bulk
333 8-DAC chr11-1chr17-1 -0.61 >More info -0.21 >More info 8-DAC Col-0 leaf explants Original data
334 ckh2 CK25 -0.54 >More info -0.27 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
335 1.5 hr ammonium -0.55 >More info -0.26 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
336 gun1-1 -lincomycin 0.64 >More info 0.17 >More info Col-0 -lincomycin Original data GEO bulk
337 TAMM27 roots 2hr KNO3 nitrogen -0.52 >More info -0.29 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
338 edr1 36 h powdery mildew -0.56 >More info -0.25 >More info Col-0 36 h powdery mildew Original data GEO bulk
339 Sulfometuron EC50 -0.63 >More info -0.18 >More info Carrier Original data GEO bulk
340 irradiated leaf (WT 1d) -0.59 >More info -0.22 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
341 pip3 At2g19270 RNAi 32 -0.53 >More info -0.27 >More info Nd-1 whole plant Original data GEO bulk
342 root cells epidermis 140mM NaCl 8 hours -0.54 >More info -0.26 >More info root cells epidermis standard 1 hour root cells epidermis Original data
343 roots bhlh100/101 0uM Fe -0.54 >More info -0.26 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
344 whole roots 140 mM NaCl 30 minutes -0.51 >More info -0.29 >More info whole roots standard Original data GEO bulk
345 6-trichlorophenoxyacetic acid 3 h -0.61 >More info -0.19 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
346 Root P recovery -0.65 >More info -0.15 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
347 cdpk6-yfp -0.61 >More info -0.19 >More info Kan seedlings Original data GEO bulk
348 gun1gun5 far-red pretreated 0.53 >More info 0.27 >More info WT far-red pretreated Original data GEO bulk
349 OH1 -0.56 >More info -0.24 >More info Col-0 leaves Original data GEO bulk
350 ABA DFPM -0.64 >More info -0.16 >More info control Original data GEO bulk
351 PAHs stress -0.66 >More info -0.14 >More info exp control phenanthrene whole plants Original data GEO bulk
352 Col-0 DCA 6d -0.56 >More info -0.23 >More info Col-0 MOCK 6d Original data GEO bulk
353 vte2-1 3d vernalization -0.61 >More info -0.18 >More info WT 3d vernalization Original data GEO bulk
354 Nicotinamide-89hr -0.55 >More info -0.24 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
355 Col-7 Sucrose 0.65 >More info 0.14 >More info col-7 Original data GEO bulk
356 abi4 vtc2 (I) -0.53 >More info -0.26 >More info Col (I) rosette Original data GEO bulk
357 ice1 control -0.52 >More info -0.26 >More info WT control Original data GEO bulk
358 whole roots -Fe 24hour -0.62 >More info -0.16 >More info whole roots standard Original data GEO bulk
359 flu -0.50 >More info -0.28 >More info WT Col Original data GEO bulk
360 low CO2 + light -0.53 >More info -0.25 >More info normal CO2 + light Original data GEO bulk
361 cpr5 -0.53 >More info -0.25 >More info WT(COL) Original data GEO bulk
362 L17 phyA line 0.50 >More info 0.28 >More info WT seedling Original data GEO bulk
363 BLM+INA -0.51 >More info -0.27 >More info CK BLM and INA seedling Original data
364 Fe starvation 24 h -0.62 >More info -0.16 >More info Control Original data GEO bulk
365 Dark 40min pls UV-AB 5min -0.50 >More info -0.28 >More info Dark 45 min Original data Light treatments
366 Protoplast Induced -0.28 >More info -0.50 >More info Uninduced Original data GEO bulk
367 rrd1 IBA 0.57 >More info 0.21 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
368 root cells stele 140mM NaCl 8 hours -0.60 >More info -0.17 >More info root cells stele standard 1 hour root cells stele Original data
369 cpr5npr1 -0.58 >More info -0.19 >More info WT(COL) Original data GEO bulk
370 Red/FR Light45min 0.52 >More info 0.25 >More info FarRed Light 45min Original data Light treatments
371 Col-0 C2H4 24h -0.59 >More info -0.18 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
372 root - 01% oxygen - 48h -0.19 >More info -0.58 >More info root - 21% oxygen - 48h Original data GEO bulk
373 Root -P 0.70 >More info 0.06 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
374 P. infestans 6 h (leaf) -0.61 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
375 pad4-PsmES4326-24hpi 0.55 >More info 0.21 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
376 Nicotinamide-93hr -0.54 >More info -0.22 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
377 rosette leaves fdh -0.56 >More info -0.20 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
378 pnp1-1 3h +P -0.52 >More info -0.24 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
379 2d dark-grown WT(Col-0)/1 hr red light -0.50 >More info -0.26 >More info 2d dark-grown WT seedling Original data GEO bulk
380 Mature callus -0.58 >More info -0.18 >More info Young callus hypocotyls Original data GEO bulk
381 SA 4mM -0.52 >More info -0.24 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
382 flu over-tAPX -0.50 >More info -0.26 >More info WT Col Original data GEO bulk
383 Col PSTDC3000 24h -0.62 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
384 Laer pretreat GA Flg22 0h -0.63 >More info -0.12 >More info Laer pretreat water control leaf discs Original data GEO bulk
385 Norflurazon -0.60 >More info -0.15 >More info Col-0 Original data GEO bulk
386 gh3.5-1D 48 hpi -0.52 >More info -0.23 >More info Col-0 uninoculated Original data GEO bulk
387 35S-MIF1 light grown -0.50 >More info -0.25 >More info Light-grown WT control Original data GEO bulk
388 Blue Light 4 h -0.62 >More info -0.13 >More info White Light 4 h Original data Light treatments
389 Dex-rga(delta17) 2h GA4 0.55 >More info 0.20 >More info Vector 4h GA4 shoots Original data GEO bulk
390 Norflurazon -0.60 >More info -0.15 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
391 rosette Dark Wounded -0.51 >More info -0.23 >More info rosette Dark Control Original data GEO bulk
392 cat2-2; 8h switch to ambient CO2 concentrations; -0.51 >More info -0.23 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
393 Col-0 mbs1-1 HL 3h 0.50 >More info 0.24 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
394 sni1 -0.52 >More info -0.22 >More info WT Original data GEO bulk
395 Mutant gh3.5-1D (AvrRpt2) -0.52 >More info -0.22 >More info Col-0 (AvrRpt2) Original data GEO bulk
396 Col-0 INA 48h -0.55 >More info -0.18 >More info Col-0 MOCK 48h Original data GEO bulk
397 ice1 6H Cold -0.53 >More info -0.20 >More info WT 6H Cold Original data GEO bulk
398 AtMinD1 Prolonged-induction -0.55 >More info -0.18 >More info Control whole plant Original data GEO bulk
399 miR 0h -0.53 >More info -0.20 >More info Col 0h Leaf Original data GEO bulk
400 toc1-1-93hr -0.55 >More info -0.18 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
401 sps1 0.63 >More info 0.10 >More info WT seedling Original data GEO bulk
402 iae1 0.53 >More info 0.20 >More info B179 Original data GEO bulk
403 8hr-pH4.5 -0.54 >More info -0.18 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
404 Time-0 chr11-1chr17-1 0.54 >More info 0.18 >More info Time-0 Col-0 leaf explants Original data
405 Laer treat paclobutrazol (PAC) -0.58 >More info -0.14 >More info Laer Control leaf discs Original data GEO bulk
406 Laer MeJA 1h 0.51 >More info 0.21 >More info Laer Control leaf discs Original data GEO bulk
407 GR-REV 60min -0.53 >More info -0.19 >More info Col 60min Original data GEO bulk
408 Leafminer systemically damaged thaliana seedlings -0.55 >More info -0.16 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
409 root cap pGL2 0h BL -0.58 >More info -0.13 >More info WR 35S 0h BL brassinosteroid root Original data
410 Roots Cd 0.65 >More info 0.06 >More info Roots control Cd Root Original data GEO bulk
411 UV -0.52 >More info -0.19 >More info WT aerial region Original data GEO bulk
412 anac017-2 H2O2 3h 0.53 >More info 0.17 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
413 Laer pretreat GA+JA Flg22 0h -0.62 >More info -0.08 >More info Laer pretreat water control leaf discs Original data GEO bulk
414 AvrRpt2 Col-0 6hpi -0.58 >More info -0.12 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
415 Ts5 roots 2hr KNO3 nitrogen -0.50 >More info -0.20 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
416 aln-1 0.60 >More info 0.10 >More info Col-0 Aerial part of seedlings Original data
417 WT leaves - Fe -0.61 >More info -0.09 >More info WT leaves + Fe Leaves Original data GEO bulk
418 Elevated CO2 expanding leaf -0.51 >More info -0.19 >More info Ambient CO2 expanding leaf expanding leaf Original data
419 nia1nia2noa1-2 -0.57 >More info -0.13 >More info Col-0 whole seedlings Original data GEO bulk
420 Laer pretreat JA Flg22 2h -0.64 >More info -0.06 >More info Laer pretreat water control leaf discs Original data GEO bulk
421 GA4 3 h (ga1 seed) -0.55 >More info -0.14 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
422 GA 120min -0.55 >More info -0.14 >More info CON120 GA 120 min. root tips Original data GEO bulk
423 NFA8 roots 2hr KNO3 nitrogen -0.52 >More info -0.17 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
424 penta Alternaria 3dpi -0.56 >More info -0.13 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
425 Hydrogen Peroxide 500 uM -0.54 >More info -0.15 >More info Control RB and PER Hydrogen Peroxide Original data
426 WT cold -0.50 >More info -0.19 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
427 1h +Pi 0.58 >More info 0.11 >More info 1h -Pi root Original data GEO bulk
428 Uniconazole 12 h -0.59 >More info -0.10 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
429 ice1 24H Cold -0.54 >More info -0.14 >More info WT 24H Cold Original data GEO bulk
430 HairpinZ 4 h (leaf) -0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
431 ein5-1 ski2-3 -0.53 >More info -0.15 >More info Col-0 aerial tissue Original data
432 gpa1-4/agb1-2 ozone 2d 0.56 >More info 0.12 >More info Col ozone 2d ozone Original data GEO bulk
433 bZIP1ko mutant N+Light- -0.51 >More info -0.17 >More info WT-sib N+Light- whole plant Original data GEO bulk
434 6h +Pi 0.55 >More info 0.13 >More info 6h -Pi root Original data GEO bulk
435 gpa1 -ABA GC 0.57 >More info 0.11 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
436 anac017-1 H2O2 3h 0.62 >More info 0.06 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
437 Lip0 UV -0.55 >More info -0.12 >More info Lip0 mock UV seedling Original data
438 root longitudinal zone-1 low sulfur 0.50 >More info 0.17 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
439 Shoot -K -0.51 >More info -0.16 >More info Control-shoot Original data GEO bulk
440 indRKD4ox -0.53 >More info -0.14 >More info Control (35S-GVG) seedlings Original data GEO bulk
441 K starvation (shoot) -0.51 >More info -0.16 >More info Ws (shoot) Original data GEO bulk
442 col-5 hrpA 2h -0.58 >More info -0.09 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
443 HSP90 Reduced hsp90.2 -0.50 >More info -0.16 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
444 root cap pGL2(root cap pGL2BRI1) 0h BL -0.50 >More info -0.16 >More info WR 35S 0h BL brassinosteroid root Original data
445 SCR-GR Time 12H Dex -0.62 >More info -0.04 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
446 tor mutant -0.64 >More info -0.02 >More info WT (Col) none seedlings Original data GEO bulk
447 gun1-1 +lincomycin 0.67 >More info -0.01 >More info Col-0 +lincomycin Original data GEO bulk
448 coi1-2 JA -0.51 >More info -0.15 >More info JA Whole seedling Original data GEO bulk
449 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.66 >More info 0.00 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
450 gul2-1 mutant -0.56 >More info -0.10 >More info WT 7 day-old whole seedlings Original data
451 root epidermis and lateral root cap 40 mM NaCl -0.56 >More info -0.10 >More info root epidermis and lateral root cap Original data GEO bulk
452 GR-REV 30min -0.59 >More info -0.07 >More info Col 30min Original data GEO bulk
453 vte1-1 3d vernalization 0.56 >More info 0.09 >More info WT 3d vernalization Original data GEO bulk
454 camta3-2 -0.53 >More info -0.12 >More info WT Original data GEO bulk
455 CCA14 dark late -0.64 >More info -0.01 >More info Col dark late Original data GEO bulk
456 pvip1 pvip2 seedling -0.63 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
457 WT no Pi -0.51 >More info -0.14 >More info WT complete seedlings Original data
458 jkd-4 QC -0.50 >More info -0.15 >More info Col-0 QC Quiescent Center Original data
459 FLIGHT TAGESB plate -0.50 >More info -0.15 >More info GROUND CONTROL TAGESB plate Original data
460 WT zebularine 5d 0.53 >More info 0.11 >More info WT mock 5d shoot apical meristem Original data
461 whole roots -Fe 3 hour -0.67 >More info 0.03 >More info whole roots standard Original data GEO bulk
462 root stele 40 mM NaCls -0.59 >More info -0.05 >More info root stele Original data GEO bulk
463 Col-0 24hpi A. brassicicola -0.66 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
464 Triazolopyrimidine EC50 -0.53 >More info -0.11 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
465 Fe starvation 3 h -0.67 >More info 0.03 >More info Control Original data GEO bulk
466 agb1 gpa1 +ABA LF 0.51 >More info 0.13 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
467 SCR-GR Time 3H Dex -0.60 >More info -0.04 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
468 IAA 1h 0.56 >More info 0.07 >More info control 1h root Original data GEO bulk
469 15m light 0.66 >More info -0.03 >More info before light whole seedlings Original data GEO bulk
470 glk1 glk2 GLK1-GR +DEX 4h -0.51 >More info -0.12 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
471 embryo ABA -0.50 >More info -0.13 >More info embryo-control ABA embryo Original data GEO bulk
472 46T-CK -0.13 >More info -0.50 >More info WT-CK none Original data
473 Col-0 +lincomycin 0.56 >More info 0.06 >More info Col-0 -lincomycin Original data GEO bulk
474 Laer pretreat JA Flg22 1h -0.64 >More info 0.02 >More info Laer pretreat water control leaf discs Original data GEO bulk
475 Laer pretreat GA+JA Flg22 1h -0.54 >More info -0.08 >More info Laer pretreat water control leaf discs Original data GEO bulk
476 fri-flc 0.52 >More info 0.10 >More info WT Original data GEO bulk
477 Shoot apex inflorescence (after bolting) -0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
478 IAA Treated 0.67 >More info -0.06 >More info Negative Control Original data GEO bulk
479 Primisulfuron EC50 -0.53 >More info -0.08 >More info Carrier (primisulfuron) Original data GEO bulk
480 seedling 3h after Gamma WT -0.50 >More info -0.11 >More info seedling day 1 unirradiated WT 3h Original data
481 Tsu-1 -Fe 48h -0.59 >More info -0.02 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
482 Tsu -Fe 48h Roots -0.59 >More info -0.02 >More info Tsu +Fe 24h Roots Original data GEO bulk
483 calcicole ecotype Cal-0 -0.55 >More info -0.05 >More info Col-4 1 mM CaCl2 Original data GEO bulk
484 BR -0.53 >More info -0.07 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
485 SLWF infested -0.55 >More info -0.05 >More info SLWF uninfested rosette tissue Original data GEO bulk
486 cat2-hCO2 0.50 >More info 0.10 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
487 opr3 OPDA 0.5 h -0.07 >More info -0.52 >More info opr3 0 h Original data GEO bulk
488 gun1gun5 Norflurazon 0.61 >More info -0.02 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
489 AAF-OX -0.50 >More info -0.09 >More info Col-0 Rosette leaf Original data GEO bulk
490 piffq FR 1h 0.52 >More info 0.06 >More info WT FR 1h whole seedling Original data GEO bulk
491 60m light 0.63 >More info -0.07 >More info before light whole seedlings Original data GEO bulk
492 Osmotic Stress 24 h (shoot) -0.58 >More info 0.02 >More info Stress mock 24 h (shoot) Original data Stress treatments
493 del1-1 5dpi -0.52 >More info -0.03 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
494 Te CA 0.52 >More info 0.03 >More info Col CA Leaves Original data
495 Aerobic e1 ate2 0.10 >More info -0.65 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
496 EBE-XVE +estradiol 0.59 >More info -0.04 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
497 GO5; 0h switch to ambient CO2 concentrations; 0.50 >More info 0.04 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
498 Shoot submergence 24h -0.50 >More info -0.04 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
499 aerial organ callus inducing medium 12 h -0.55 >More info 0.02 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
500 WT heat shock 0.59 >More info -0.06 >More info WT untreated above-ground parts Original data GEO bulk
501 ulp1c ulp1d +Pto -0.52 >More info -0.01 >More info ulp1c ulp1d mock Original data GEO bulk
502 FarRed Light 45min -0.56 >More info 0.03 >More info White Light 45min Original data Light treatments
503 aerial organ callus inducing medium 48 h -0.63 >More info 0.10 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
504 nas4x leaves + Fe -0.53 >More info -0.00 >More info WT leaves + Fe Leaves Original data GEO bulk
505 bri1-5 mutant 0.53 >More info -0.01 >More info WT 7 day-old whole seedlings Original data
506 Shoot submergence 7h -0.52 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
507 ABA 0.5 h -0.53 >More info 0.01 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
508 WR 35S 8h BL -0.52 >More info 0.00 >More info WR 35S 0h BL brassinosteroid root Original data
509 light 0.69 >More info -0.18 >More info dark light seedling Original data GEO bulk
510 ALC Toc1 light-light EtOH 0.60 >More info -0.09 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
511 1 h Light IP RNA 0.52 >More info -0.02 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
512 Col 0 2h KNO3 0.51 >More info -0.01 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
513 WT +Pep2 10h -0.50 >More info -0.00 >More info WT untreated Pep2 Original data GEO bulk
514 WT roots - Fe -0.68 >More info 0.19 >More info WT roots + Fe Roots Original data GEO bulk
515 WR 35S 3h BL -0.53 >More info 0.04 >More info WR 35S 0h BL brassinosteroid root Original data
516 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
517 BAM7-Lig Ox untreated 0.04 >More info -0.52 >More info WT untreated none shoot Original data
518 seedling 3h after HZE WT -0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
519 dsr1 -0.58 >More info 0.10 >More info WT mock Whole seedling Original data GEO bulk
520 Laer pretreat GA Flg22 2h -0.51 >More info 0.04 >More info Laer pretreat water control leaf discs Original data GEO bulk
521 pip3 At2g19270 TDNA 6h-5 -0.52 >More info 0.05 >More info Col-0 whole plant Original data GEO bulk
522 ahg1-1 -0.50 >More info 0.03 >More info ABA control Original data GEO bulk
523 Truncated AC2 T2 0.50 >More info -0.03 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
524 Mutant iaa17-6 (IAA) -0.50 >More info 0.04 >More info Col (IAA) Original data GEO bulk
525 G3P -0.53 >More info 0.07 >More info Mock distal leaves Original data GEO bulk
526 root - 04% oxygen - 48h 0.25 >More info -0.70 >More info root - 21% oxygen - 48h Original data GEO bulk
527 rosette leaves lcr -0.54 >More info 0.10 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
528 SA Treated -0.52 >More info 0.08 >More info Water Original data GEO bulk
529 Ws seedlings -0.55 >More info 0.12 >More info ged1 seedlings Original data GEO bulk
530 ged1 seedlings 0.55 >More info -0.12 >More info Ws seedlings Original data GEO bulk
531 Propiconazole 12 h -0.50 >More info 0.07 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
532 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
533 Cs root -0.52 >More info 0.10 >More info control root Original data GEO bulk
534 Brassinolide 0.5 h (det2) 0.12 >More info -0.54 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
535 Red Light 4 h -0.57 >More info 0.15 >More info White Light 4 h Original data Light treatments
536 IAA7mII over-expressor IAA Treated -0.27 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
537 10min Reillumination IP RNA 0.56 >More info -0.16 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
538 Heat shock optimum -0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
539 Seedling KUA1-IOX est -0.65 >More info 0.28 >More info Seedling KUA1-IOX mock Original data
540 ahg3-1 -0.53 >More info 0.16 >More info ABA control Original data GEO bulk
541 piffq FR 3h 0.54 >More info -0.18 >More info WT FR 3h whole seedling Original data GEO bulk
542 30m light 0.54 >More info -0.20 >More info before light whole seedlings Original data GEO bulk
543 sta1 -0.59 >More info 0.25 >More info WT Original data GEO bulk
544 agb1 +ABA LF 0.50 >More info -0.19 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
545 WT +Pep2 2h -0.65 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
546 roots bhlh100/101 100uM Fe -0.60 >More info 0.36 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
547 Col BTH -0.44 >More info 0.67 >More info Col rosettes Original data GEO bulk
548 root - 01% oxygen - 30min 0.41 >More info -0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
549 root - 04% oxygen - 2h 0.56 >More info -0.75 >More info root - 21% oxygen - 2h Original data GEO bulk
550 root - 08% oxygen - 2h 0.52 >More info -0.70 >More info root - 21% oxygen - 2h Original data GEO bulk
551 Laer pretreat GA Flg22 1h -0.57 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
552 root - 04% oxygen - 30min 0.58 >More info -0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
553 Leafminer damaged seedlings -0.64 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
554 root - 08% oxygen - 30min 0.63 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
555 siliques AtHb1 control -0.50 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
556 Col0-PsmES4326-24hpi -0.62 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk