4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on IAA/inhibitor B Treated
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List of experiments correlated with "IAA/inhibitor B Treated"  Help Download transcriptome of top 30
Score Experiment Correlation from
IAA/inhibitor B Treated		 Correlation to
IAA/inhibitor B Treated		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 IAA/inhibitor B Treated 1.00 >More info 1.00 >More info IAA Treated Original data GEO bulk
2 inhibitor B Treated 0.92 >More info 0.92 >More info Negative Control Original data GEO bulk
3 IAA/inhibitor A Treated 0.85 >More info 0.88 >More info IAA Treated Original data GEO bulk
4 5-Triiodobenzoic acid3 h 0.84 >More info 0.86 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 TNT-seedlings 0.81 >More info 0.87 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
6 inhibitor A Treated 0.82 >More info 0.85 >More info Negative Control Original data GEO bulk
7 Phytoprostane A1 4 h 0.80 >More info 0.79 >More info Col-0 Original data GEO bulk
8 plant (tga2-5-6) 4h phytoprostane A1 0.72 >More info 0.77 >More info plant (tga2-5-6) 4h control Original data GEO bulk
9 plant (Col-0) 4h phytoprostane A1 0.73 >More info 0.75 >More info plant (tga2-5-6) 4h control Original data GEO bulk
10 Col-0 low oxygen 0.78 >More info 0.68 >More info Col-0 control low oxygen root Original data GEO bulk
11 oligomycin 1 h 0.66 >More info 0.80 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
12 WT+H2O2 0.77 >More info 0.67 >More info WT H2O2 Original data GEO bulk
13 AgNO3 3 h 0.76 >More info 0.64 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
14 WT 30μM arsenate 8 hours. 0.75 >More info 0.65 >More info WT control (not supplemented). Original data
15 bbx24 in Simulated Shade -0.71 >More info -0.68 >More info WT in simulated shade shade seedling Original data
16 Anoxia 0.75 >More info 0.64 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
17 toc1-1-85hr 0.55 >More info 0.81 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
18 WT seedlings MV 0.75 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
19 root Dosed gold 0.78 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
20 0.125 mM gold 24 h 0.78 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
21 R. solani AG8 0.74 >More info 0.60 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
22 PNO8 3 h 0.64 >More info 0.68 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
23 6-trichlorophenoxyacetic acid 3 h 0.63 >More info 0.69 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
24 root cells endodermis and quiescent center -Fe 0.71 >More info 0.61 >More info whole roots standard Original data GEO bulk
25 SA 0.75 >More info 0.55 >More info WT mock Whole seedling Original data GEO bulk
26 chito-tetramer 0.69 >More info 0.58 >More info Col Mock Original data GEO bulk
27 NJ15 0.63 >More info 0.64 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
28 Ibuprofen 3 h 0.56 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
29 anac017-2 water 3h 0.52 >More info 0.73 >More info WT water 3h 3h_water Original data GEO bulk
30 oligomycin 4 h 0.70 >More info 0.54 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
31 Selenate (root) 0.70 >More info 0.53 >More info Ws (root) Original data GEO bulk
32 Root Selenate 0.70 >More info 0.53 >More info Root control 40 micromolar selenate Root Original data GEO bulk
33 toc1-1-81hr 0.57 >More info 0.66 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
34 root protoplasts 40 mM NaCl 0.62 >More info 0.60 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
35 9 hr Hypoxia 1 hr recovery Total RNA 0.74 >More info 0.48 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
36 (Col-0)+200 uM As 0.62 >More info 0.60 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
37 dicamba 0.73 >More info 0.49 >More info WT mock whole seedling Original data GEO bulk
38 Rose Bengal 0.5 uM 0.54 >More info 0.67 >More info Control RB and PER Rose Bengal Original data
39 Nicotinamide-61hr 0.62 >More info 0.58 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
40 chito-octamer 0.63 >More info 0.56 >More info Col Mock Original data GEO bulk
41 (Col-0)+100 uM As 0.61 >More info 0.58 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
42 root cells stele -Fe 0.66 >More info 0.53 >More info whole roots standard Original data GEO bulk
43 root cells columella root cap -Fe 0.68 >More info 0.51 >More info whole roots standard Original data GEO bulk
44 WT-Dry 0.54 >More info 0.64 >More info WT-CK dehydration treatment 1h Original data
45 Cocultivation 8 hrs root 0.68 >More info 0.50 >More info Mock cocultivation 8 hrs root Root Original data
46 CMP 4hr 0.76 >More info 0.42 >More info Acetone 4hr root Original data GEO bulk
47 CeO2 germinant -0.59 >More info -0.59 >More info Millipore Water germinant CeO2 seedling Original data
48 ex2 flu dark 8hours/30 minute light 0.46 >More info 0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
49 toc1-1-57hr 0.61 >More info 0.56 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
50 Hydrogen Peroxide 500 uM 0.59 >More info 0.58 >More info Control RB and PER Hydrogen Peroxide Original data
51 35S::RSL4 -0.53 >More info -0.63 >More info Col-0 Control root Original data GEO bulk
52 P.p 2.5hai 0.59 >More info 0.57 >More info At-Control roots Original data GEO bulk
53 Mutant axr3-1 (IAA) 0.56 >More info 0.59 >More info Col (IAA) Original data GEO bulk
54 Seedling KUA1-IOX est 0.65 >More info 0.50 >More info Seedling KUA1-IOX mock Original data
55 whole roots 140 mM NaCl 1 hour 0.64 >More info 0.51 >More info whole roots standard Original data GEO bulk
56 Heat and anoxia 0.65 >More info 0.50 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
57 bak1-3 +Pep2 2h 0.54 >More info 0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
58 cat2-short-day 2d 0.53 >More info 0.62 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
59 flu 0.67 >More info 0.47 >More info WT Col Original data GEO bulk
60 WT AntimycinA 3h 0.71 >More info 0.43 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
61 (Ws-2)+100 uM As 0.62 >More info 0.51 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
62 roottip hypoxia total 0.65 >More info 0.48 >More info roottip control total Original data GEO bulk
63 FLIGHT TAGESB plate6 ROOTS 0.62 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
64 Whole root - S 3H 0.57 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
65 Mutant arf2-6 (IAA) 0.49 >More info 0.64 >More info Col (IAA) Original data GEO bulk
66 flu dark 8hours/30 minute light 0.39 >More info 0.74 >More info col dark 8hours/30 minute light Original data GEO bulk
67 cpctry 0.42 >More info 0.70 >More info Col Original data GEO bulk
68 Mutant arf19-1 -0.46 >More info -0.65 >More info Col Original data GEO bulk
69 phr1 Shoot-Pi 0.60 >More info 0.51 >More info WT Root-Pi shoots Original data GEO bulk
70 35:SUB1C -0.49 >More info -0.62 >More info WT whole seedling Original data GEO bulk
71 whole roots 140 mM NaCl 30 minutes 0.55 >More info 0.55 >More info whole roots standard Original data GEO bulk
72 1h +Pi -0.65 >More info -0.45 >More info 1h -Pi root Original data GEO bulk
73 P.p 30hai 0.72 >More info 0.38 >More info At-Control roots Original data GEO bulk
74 IAA 0.5 h 0.45 >More info 0.65 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
75 cat2-2; 8h switch to ambient CO2 concentrations; 0.39 >More info 0.71 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
76 Fenclorim 4hr 0.76 >More info 0.33 >More info Acetone 4hr root Original data GEO bulk
77 Cycloheximide 3 h 0.62 >More info 0.47 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
78 protoplasted roots pH4.6 0.61 >More info 0.48 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
79 Chemically 0.48 >More info 0.61 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
80 hira-root -0.58 >More info -0.50 >More info WT-root root Original data
81 WT 3h -P 0.51 >More info 0.57 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
82 9 hr Hypoxia Total RNA 0.73 >More info 0.35 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
83 Whole root - low pH 12H 0.60 >More info 0.48 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
84 Nicotinamide-57hr 0.67 >More info 0.41 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
85 flu over-tAPX 0.64 >More info 0.44 >More info WT Col Original data GEO bulk
86 toc1-1-53hr 0.56 >More info 0.51 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
87 Col0-PsmES4326-24hpi 0.46 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
88 Kas-1 -Fe 24h -0.47 >More info -0.60 >More info Kas-1 +Fe 24h roots Original data GEO bulk
89 Kas -Fe 24h Roots -0.47 >More info -0.60 >More info Kas +Fe 24h Roots Original data GEO bulk
90 Col-0 2HS 0.65 >More info 0.41 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
91 Nicotinamide-81hr 0.61 >More info 0.45 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
92 WT H2O2 3h 0.65 >More info 0.41 >More info WT water 3h 3h_H2O2 Original data GEO bulk
93 root hypoxia total 0.69 >More info 0.37 >More info root control total Original data GEO bulk
94 TAMM27 roots 2hr KNO3 nitrogen 0.57 >More info 0.49 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
95 4C 1h 0.51 >More info 0.55 >More info 4C 0h Original data GEO bulk
96 Col-Luc WT 3h antimycin A 0.61 >More info 0.45 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
97 GO5; 8h switch to ambient CO2 concentrations; 0.51 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
98 root epidermis and lateral root cap pH4.6 0.55 >More info 0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
99 Col-0 0h NAA 0.50 >More info 0.54 >More info Col-0 6h MOCK Original data GEO bulk
100 Col-0 wt Hypoxic 0.61 >More info 0.43 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
101 WT-16ºC -0.58 >More info -0.46 >More info WT-23ºC Original data GEO bulk
102 root cells epidermis 140mM NaCl 48 hours 0.56 >More info 0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
103 root cells epidermis 140mM NaCl 3 hours 0.54 >More info 0.50 >More info root cells epidermis standard 1 hour root cells epidermis Original data
104 Protoplast Induced 0.48 >More info 0.56 >More info Uninduced Original data GEO bulk
105 Heat shock optimum 0.39 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
106 2 hr Hypoxia Total RNA 0.68 >More info 0.35 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
107 WT+chitooctaose 0.40 >More info 0.63 >More info WT+water chitooctaose seedlings Original data GEO bulk
108 P.p 6hai 0.70 >More info 0.32 >More info At-Control roots Original data GEO bulk
109 coi1-2 0.65 >More info 0.37 >More info Col-0 mock Whole seedling Original data GEO bulk
110 MG132 3 h 0.50 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
111 15m.KCl 0.56 >More info 0.46 >More info To. KCl 14 day old Roots Original data GEO bulk
112 PsJN -0.40 >More info -0.62 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
113 WT NAA 1h 0.55 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
114 anac017-2 AntimycinA 3h -0.68 >More info -0.33 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
115 gai Control 0.65 >More info 0.36 >More info Laer Control leaf discs Original data GEO bulk
116 Ws HS 0.42 >More info 0.59 >More info Ws control heat shocked seedling Original data GEO bulk
117 Tsu-1 -Fe 24h 0.49 >More info 0.52 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
118 Tsu -Fe 24h Roots 0.49 >More info 0.52 >More info Tsu +Fe 24h Roots Original data GEO bulk
119 35S::PI ap3-3 35S::AP-GR +DEX 0.49 >More info 0.52 >More info 0hr DEX Original data GEO bulk
120 root cells -Fe 0.58 >More info 0.42 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
121 2hr transitory KNO3 SR cell 0.54 >More info 0.46 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
122 sid2-avrB-6h 0.45 >More info 0.55 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
123 Nicotinamide-85hr 0.56 >More info 0.43 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
124 P.p 10.5hai 0.66 >More info 0.33 >More info At-Control roots Original data GEO bulk
125 spch 0.58 >More info 0.41 >More info Col-0 WT whole seedling Original data GEO bulk
126 K starvation (root) 0.59 >More info 0.40 >More info Ws (root) Original data GEO bulk
127 pip3 At2g19270 RNAi 32 0.45 >More info 0.54 >More info Nd-1 whole plant Original data GEO bulk
128 Col-0 HS 0.37 >More info 0.62 >More info Col-0 control heat shocked seedling Original data GEO bulk
129 WT (Col-0) heat shock 0.37 >More info 0.62 >More info WT (Col-0) whole seedling Original data GEO bulk
130 iae1 -0.49 >More info -0.50 >More info B179 Original data GEO bulk
131 root cells epidermis 140mM NaCl 8 hours 0.51 >More info 0.47 >More info root cells epidermis standard 1 hour root cells epidermis Original data
132 toc1-1-65hr 0.56 >More info 0.42 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
133 WT chitooctaose 0.52 >More info 0.46 >More info WT water Original data GEO bulk
134 Root -K 0.59 >More info 0.39 >More info Control-root Original data GEO bulk
135 6h +Pi -0.59 >More info -0.39 >More info 6h -Pi root Original data GEO bulk
136 Col-0 37C 0.48 >More info 0.50 >More info Col-0 22C Original data GEO bulk
137 35S-MIF1 dark grown -0.48 >More info -0.50 >More info Dark-grown WT control Original data GEO bulk
138 pip3 At2g19270 RNAi 24 0.42 >More info 0.56 >More info Nd-1 whole plant Original data GEO bulk
139 Light 0.44 >More info 0.54 >More info Control Original data GEO bulk
140 4C 2h(SOIL) 0.41 >More info 0.57 >More info 4C 0h(SOIL) Original data GEO bulk
141 root stele 40 mM NaCls 0.65 >More info 0.32 >More info root stele Original data GEO bulk
142 9 hr Hypoxia 1 hr recovery IP RNA 0.67 >More info 0.30 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
143 Whole root - low pH 3H 0.47 >More info 0.50 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
144 9m.KCl 0.55 >More info 0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
145 Mutant iaa17-6 -0.36 >More info -0.60 >More info Col Original data GEO bulk
146 whole roots -Fe 72 hour 0.55 >More info 0.40 >More info whole roots standard Original data GEO bulk
147 Fe starvation 72 h 0.55 >More info 0.40 >More info Control Original data GEO bulk
148 ani1 T0.5 -0.50 >More info -0.45 >More info WT T0.5 root tissue Original data GEO bulk
149 GA4 3 h (ga1 seed) 0.62 >More info 0.33 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
150 ahg1-1 0.51 >More info 0.44 >More info ABA control Original data GEO bulk
151 toc1-1-73hr 0.52 >More info 0.43 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
152 seedlings-week-old RECA1-overexpressing
transgenic		 0.60 >More info 0.35 >More info seedlings-week-old Col-0 seedlings Original data
153 whole roots -Fe 48 hour 0.56 >More info 0.38 >More info whole roots standard Original data GEO bulk
154 Leafminer damaged seedlings 0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
155 Nicotinamide-65hr 0.62 >More info 0.32 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
156 WT flg22 2h 0.52 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
157 ahg2-1sid2-2 0.42 >More info 0.52 >More info WT (Col) control Original data GEO bulk
158 35S:RPS4 eds1-2 2h -0.31 >More info -0.63 >More info 35S:RPS4 2h leaves Original data
159 DUO1 induced 12h 0.39 >More info 0.54 >More info 12hr-not-induced whole plant Original data GEO bulk
160 seedlings +5AC 0.60 >More info 0.33 >More info control seedlings 10-day old whole seedling Original data GEO bulk
161 Ts5 roots 2hr KCl control 0.51 >More info 0.42 >More info Col0 roots 2hr KCl control root Original data GEO bulk
162 Root -Cs 0.52 >More info 0.40 >More info Control-root Original data GEO bulk
163 2hr continuous KNO3 SR cell 0.54 >More info 0.38 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
164 GR-REV 60min 0.54 >More info 0.38 >More info Col 60min Original data GEO bulk
165 Chitosan 3h Treatment 0.54 >More info 0.38 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
166 gul2-1 mutant 0.57 >More info 0.35 >More info WT 7 day-old whole seedlings Original data
167 root cells endodermis 140mM NaCl 3 hours 0.53 >More info 0.38 >More info root cells endodermis standard 1 hour root cells endodermis Original data
168 NAA -AA -0.52 >More info -0.39 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
169 NaCl Col 0.55 >More info 0.36 >More info Col Original data GEO bulk
170 whole roots -Fe 6 hour 0.36 >More info 0.55 >More info whole roots standard Original data GEO bulk
171 root cells endodermis 140mM NaCl 48 hours 0.50 >More info 0.41 >More info root cells endodermis standard 1 hour root cells endodermis Original data
172 mp-B4149 mutant IAA 0.59 >More info 0.32 >More info GR-bdl IAA Original data GEO bulk
173 ani1 T16 -0.62 >More info -0.28 >More info WT T16 root tissue Original data GEO bulk
174 BLM+INA 0.62 >More info 0.28 >More info CK BLM and INA seedling Original data
175 arr-dmso-sample 0.57 >More info 0.33 >More info Wt-dmso-sample seedling Original data
176 WT NAA/flg 1h 0.52 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk
177 FHY3p dark+DEX -0.61 >More info -0.28 >More info FHY3p dark+mock Original data GEO bulk
178 P-chlorophenoxy- isobutyric acid 3 h 0.39 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
179 cdkf:1-2 0.60 >More info 0.28 >More info wt seedling young seedlings Original data GEO bulk
180 til1-1 22C 0.53 >More info 0.35 >More info Col-0 22C Original data GEO bulk
181 root hypoxia pSHR 0.38 >More info 0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
182 siliques AtHb1 control 0.36 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
183 Col-0 Root 100 mM ATP 30 min 0.58 >More info 0.30 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
184 bak1-3 +Pep2 10h 0.69 >More info 0.19 >More info WT +Pep2 10h Pep2 Original data GEO bulk
185 Fenclorim 24hr 0.70 >More info 0.17 >More info Acetone 24hr root Original data GEO bulk
186 Nicotinamide-53hr 0.60 >More info 0.27 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
187 cell culture 4 h phytoprostane A1 0.50 >More info 0.37 >More info cell culture 4 h control Original data GEO bulk
188 Mutant iaa5_6_19 -0.37 >More info -0.50 >More info Col Original data GEO bulk
189 Dark 40min pls UV-AB 5min 0.58 >More info 0.29 >More info Dark 45 min Original data Light treatments
190 sid2-2 9 hpi A. brassicicola 0.54 >More info 0.32 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
191 elf3-7-23ºC -0.52 >More info -0.34 >More info WT-23ºC Original data GEO bulk
192 HARAP aerobic -0.33 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
193 gpa1-4/agb1-2 clean-air 3h 0.32 >More info 0.54 >More info Col clean-air 3h clean-air Original data GEO bulk
194 root longitudinal zone-4 pH 4.6 0.35 >More info 0.51 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
195 dde2-2 9 hpi A. brassicicola 0.51 >More info 0.34 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
196 Salt Stress 24 h (root) 0.54 >More info 0.31 >More info Stress mock 24 h (root) Original data Stress treatments
197 root cells cortex -Fe 0.59 >More info 0.26 >More info whole roots standard Original data GEO bulk
198 ABA 0.5 h 0.57 >More info 0.28 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
199 pip3 At2g19270 TDNA 9 0.52 >More info 0.32 >More info Col-0 whole plant Original data GEO bulk
200 10min Reillumination Total RNA -0.55 >More info -0.29 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
201 TaFLS overexpression line (OE2) -0.34 >More info -0.50 >More info Col-0 Rosette leaves Original data
202 opr3 OPDA 0.5 h 0.26 >More info 0.58 >More info opr3 0 h Original data GEO bulk
203 9 hr Hypoxia IP RNA 0.64 >More info 0.19 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
204 Col upon hypoxia 6 hrs 0.54 >More info 0.29 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
205 root cells endodermis 140mM NaCl 8 hours 0.50 >More info 0.33 >More info root cells endodermis standard 1 hour root cells endodermis Original data
206 SCR-GR Time 3H Dex 0.52 >More info 0.31 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
207 Nicotinamide-89hr 0.58 >More info 0.25 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
208 BLM 0.55 >More info 0.27 >More info CK BLM seedling Original data
209 Nicotinamide-93hr 0.53 >More info 0.29 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
210 embryo paclobutrazol 0.55 >More info 0.27 >More info embryo-control paclobutrazol embryo Original data GEO bulk
211 ahg2-1 0.29 >More info 0.53 >More info WT (Col) control Original data GEO bulk
212 NaCl cpctry 0.27 >More info 0.55 >More info NaCl Col Original data GEO bulk
213 plant (Col-0) 4h OPDA 0.60 >More info 0.22 >More info plant (Col-0) 4h control Original data GEO bulk
214 OPDA 4 h 0.60 >More info 0.22 >More info Col-0 Original data GEO bulk
215 SCR-GR Time 12H Dex 0.61 >More info 0.20 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
216 DFPM 0.64 >More info 0.17 >More info control Original data GEO bulk
217 Cold Stress 24 h (root) 0.51 >More info 0.30 >More info Stress mock 24 h (root) Original data Stress treatments
218 ABA DFPM 0.61 >More info 0.20 >More info control Original data GEO bulk
219 cat2-short-day 4d 0.29 >More info 0.52 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
220 abi1 hypocotyl 0.31 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
221 afb3-1 2h KNO3 0.56 >More info 0.24 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
222 mutant acs4A (single mutant) -0.52 >More info -0.28 >More info col control (single mutant) Original data GEO bulk
223 embryo ABA 0.51 >More info 0.29 >More info embryo-control ABA embryo Original data GEO bulk
224 CMP 24hr 0.66 >More info 0.14 >More info Acetone 24hr root Original data GEO bulk
225 Shoot apex inflorescence (after bolting) 0.15 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
226 Red/FR Light45min 0.04 >More info 0.76 >More info FarRed Light 45min Original data Light treatments
227 atmyc2 cop1 Seedling Dark 0.55 >More info 0.24 >More info WT Seedling Dark Original data GEO bulk
228 ein2-1 9 hpi A. brassicicola 0.52 >More info 0.27 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
229 safener treated 0.54 >More info 0.24 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
230 nia1nia2noa1-2 0.56 >More info 0.22 >More info Col-0 whole seedlings Original data GEO bulk
231 dorn1-1 Root 100 mM ATP 30 min -0.24 >More info -0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
232 iron minus 0 h 0.50 >More info 0.27 >More info iron +0 h root Original data GEO bulk
233 Roots Cd -0.67 >More info -0.10 >More info Roots control Cd Root Original data GEO bulk
234 plant (tga2-5-6) 4h OPDA 0.52 >More info 0.25 >More info plant (tga2-5-6) 4h control Original data GEO bulk
235 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
236 3x(m) 0.18 >More info 0.59 >More info 2x two week old seedlings Original data
237 rosette Dark Wounded 0.56 >More info 0.20 >More info rosette Dark Control Original data GEO bulk
238 Col-0 under 4 days salt 0.58 >More info 0.18 >More info Col-0 under control 4 days salt treatment rosette Original data
239 ein5-1 ski2-3 0.54 >More info 0.22 >More info Col-0 aerial tissue Original data
240 IAA 1h -0.58 >More info -0.18 >More info control 1h root Original data GEO bulk
241 24h +Pi -0.53 >More info -0.23 >More info 24h -Pi root Original data GEO bulk
242 low CO2 + light 0.52 >More info 0.24 >More info normal CO2 + light Original data GEO bulk
243 C24 ozone 0.53 >More info 0.23 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
244 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
245 Col BTH 0.09 >More info 0.67 >More info Col rosettes Original data GEO bulk
246 Nicotinamide-73hr 0.58 >More info 0.17 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
247 Col-0 flu HL 3h 0.50 >More info 0.24 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
248 root cells epidermis and lateral root cap -Fe 0.52 >More info 0.22 >More info whole roots standard Original data GEO bulk
249 Blue Light 45 min -0.19 >More info -0.55 >More info White Light 45min Original data Light treatments
250 shoot-10 μM DEX- 6 hr 0.51 >More info 0.22 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
251 seedling 1.5h after Gamma WT 0.62 >More info 0.11 >More info seedling day 1 unirradiated WT 1.5h Original data
252 ARR22-ox (t-zeatin 3 h) 0.54 >More info 0.19 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
253 IAA 1 h 0.23 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
254 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.56 >More info 0.16 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
255 shoots bhlh100/101 0uM Fe 0.59 >More info 0.13 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
256 KAN1-GR 30min 0.58 >More info 0.14 >More info KAN1-GR 0min Original data GEO bulk
257 toc1-1-49hr 0.56 >More info 0.15 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
258 Col-0 ozone 0.56 >More info 0.15 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
259 IMI 4mM 0.55 >More info 0.16 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
260 seedling 12h after Gamma WT -0.15 >More info -0.56 >More info seedling day 1 unirradiated WT 12h Original data
261 Laer treat paclobutrazol (PAC) 0.52 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
262 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
263 root callus inducing medium 24h -0.54 >More info -0.16 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
264 Col leaf 100mM NaCl 0.52 >More info 0.18 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
265 Col leaf 100mM NaCl 0.52 >More info 0.18 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
266 Col-0 2h NAA 0.51 >More info 0.19 >More info Col-0 6h MOCK Original data GEO bulk
267 Col 100mM NaCl 0.52 >More info 0.18 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
268 Col-0 overexpressing At1g54160 control 0.51 >More info 0.19 >More info WT no treatement Original data GEO bulk
269 WT Col-0 Bgh inoculated 0.52 >More info 0.18 >More info WT Col-0 Un-inoculated Original data GEO bulk
270 At1g54160 ox 0.51 >More info 0.19 >More info Col-0 Original data GEO bulk
271 Col-0 9 hpi A. brassicicola 0.52 >More info 0.16 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
272 Nicotinamide-69hr 0.55 >More info 0.13 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
273 20h Col-0 0.00 >More info -0.68 >More info 00h Col-0 Original data GEO bulk
274 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.57 >More info 0.10 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
275 2 hr Hypoxia IP RNA 0.55 >More info 0.11 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
276 CT101 ozone 0.52 >More info 0.14 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
277 AvrRpm1 2 h (leaf) 0.53 >More info 0.13 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
278 OsRLCK253 expressing -0.54 >More info -0.12 >More info WT seedlings Original data GEO bulk
279 noa1-2 0.50 >More info 0.16 >More info Col-0 whole seedlings Original data GEO bulk
280 WT roots - Fe 0.52 >More info 0.14 >More info WT roots + Fe Roots Original data GEO bulk
281 Primisulfuron EC50 0.52 >More info 0.13 >More info Carrier (primisulfuron) Original data GEO bulk
282 pepr1-1 Pepr2-3 +Pep2 2h -0.52 >More info -0.13 >More info WT +Pep2 2h Pep2 Original data GEO bulk
283 Te ozone 0.50 >More info 0.15 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
284 desiccated mature pollen grains -0.14 >More info -0.51 >More info hydrated pollen grains Original data GEO bulk
285 shoots WT 0uM Fe 0.52 >More info 0.12 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
286 2hr transitory KNO3 PrR cell 0.52 >More info 0.11 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
287 Triazolopyrimidine EC50 0.52 >More info 0.11 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
288 coi1-16 ein2 sid2 ozone 0.53 >More info 0.10 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
289 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
290 Nicotinamide-49hr 0.58 >More info 0.04 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
291 sng1 UV 0.50 >More info 0.12 >More info UV aerial region Original data GEO bulk
292 WT 24H Cold 0.53 >More info 0.08 >More info WT control Original data GEO bulk
293 whole roots -Fe 3 hour 0.51 >More info 0.09 >More info whole roots standard Original data GEO bulk
294 coi1-16 ein2 sid2 ctrl -0.52 >More info -0.08 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
295 Fe starvation 3 h 0.51 >More info 0.09 >More info Control Original data GEO bulk
296 DUO1 induced 6h 0.07 >More info 0.52 >More info 6hr-not-induced whole plant Original data GEO bulk
297 Col-0 24hpi A. brassicicola 0.57 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
298 16h Col-0 0.02 >More info -0.61 >More info 00h Col-0 Original data GEO bulk
299 IAA Treated -0.55 >More info -0.03 >More info Negative Control Original data GEO bulk
300 08h Col-0 -0.06 >More info -0.52 >More info 00h Col-0 Original data GEO bulk
301 seedling 1.5h after HZE WT 0.50 >More info 0.08 >More info seedling day 1 unirradiated WT 1.5h Original data
302 miR396b overexpressor -0.08 >More info -0.50 >More info Col-0 vegetative apices together with the leaf primordia Original data
303 seedling 12h after HZE atm-1 0.03 >More info -0.61 >More info seedling day 1 unirradiated atm-1 12h Original data
304 2hr continuous KNO3 PrR cell 0.51 >More info 0.06 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
305 dde2-2 24hpi A. brassicicola 0.01 >More info 0.56 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
306 seedling 12h after Gamma atm-1 -0.04 >More info -0.53 >More info seedling day 1 unirradiated atm-1 12h Original data
307 seedling 3h after Gamma WT 0.53 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
308 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
309 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
310 Lipopolysaccaride4 h (leaf) 0.50 >More info 0.01 >More info Mock 4 h (leaf) Original data Elicitor treatments
311 toc1-1-77hr 0.59 >More info -0.11 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
312 HairpinZ 4 h (leaf) 0.51 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
313 12h Col-0 0.02 >More info -0.50 >More info 00h Col-0 Original data GEO bulk
314 Botrytis cinerea 48h 0.51 >More info -0.04 >More info control 48h Original data GEO bulk
315 4d red light grown hmr-5 seedlings 0.51 >More info -0.05 >More info 4d red light grown WT(Col-0) seedlings Original data
316 2hr continuous KNO3 EPR cell 0.04 >More info -0.50 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
317 35S::ERF104 H2O 4h 0.50 >More info -0.12 >More info Col-0 H2O 4h Original data GEO bulk
318 +1.6 mM Tween 20 1 h. 0.62 >More info -0.24 >More info +distilled water 1 h. Original data GEO bulk
319 seedling 6h after HZE atm-1 0.17 >More info -0.54 >More info seedling day 1 unirradiated atm-1 6h Original data
320 cop1 Seedling BL+ABA 0.50 >More info -0.15 >More info WT Seedling BL+ABA Original data GEO bulk
321 Mock pft1 leaf 0.22 >More info -0.57 >More info Mock Col-0 leaf water leaf Original data GEO bulk
322 phyABCDE 4-day dark- 2 hours Rc50 0.50 >More info -0.18 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
323 FarRed Light 45min 0.19 >More info -0.51 >More info White Light 45min Original data Light treatments
324 4d red light grown hmr-22 seedlings 0.52 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
325 shoot hypoxia p35S 0.26 >More info -0.54 >More info shoot hypoxia total Original data GEO bulk
326 CLO 4mM 0.51 >More info -0.27 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk