4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on PsJN
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List of experiments correlated with "PsJN"
Download transcriptome of top 30
Score
Experiment
Correlation from
PsJN
Correlation to
PsJN
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
PsJN
1.00
>More info
1.00
>More info
Control
inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN
Plantlet
Original data
GEO bulk
2
inhibitor B Treated
-0.71
>More info
-0.49
>More info
Negative Control
Original data
GEO bulk
3
plant (Col-0) 4h phytoprostane A1
-0.60
>More info
-0.56
>More info
plant (tga2-5-6) 4h control
Original data
GEO bulk
4
Laer pretreat JA Flg22 0h
-0.48
>More info
-0.63
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
5
cat2-short-day 4d
-0.68
>More info
-0.42
>More info
Col0-SD4
transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark)
rosette leaf material
Original data
GEO bulk
6
Fenclorim 24hr
-0.66
>More info
-0.42
>More info
Acetone 24hr
root
Original data
GEO bulk
7
Kas-1 -Fe 24h
0.46
>More info
0.59
>More info
Kas-1 +Fe 24h
roots
Original data
GEO bulk
8
Kas -Fe 24h Roots
0.46
>More info
0.59
>More info
Kas +Fe 24h Roots
Original data
GEO bulk
9
sid2-2 24hpi A. brassicicola
-0.58
>More info
-0.44
>More info
Col-0 9 hpi A. brassicicola
3rd-5th true leaves
Original data
10
IAA/inhibitor B Treated
-0.62
>More info
-0.40
>More info
IAA Treated
Original data
GEO bulk
11
Mutant tga2_5_6
0.45
>More info
0.57
>More info
Col-0
Original data
GEO bulk
12
plant (tga2-5-6) 4h control
0.45
>More info
0.57
>More info
plant (Col-0) 4h control
Original data
GEO bulk
13
Whole root - low pH 3H
-0.36
>More info
-0.66
>More info
Whole root - Std pH 3H
pH 4.6 for 3 hr
Original data
GEO bulk
14
Col BTH
0.35
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
15
pip3 At2g19270 RNAi 32
-0.57
>More info
-0.44
>More info
Nd-1
whole plant
Original data
GEO bulk
16
BI-1-30min IAA
-0.66
>More info
-0.35
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
17
E.orontii Infection 3 day
0.61
>More info
0.38
>More info
Uninfection 3 day
Original data
Elicitor treatments
18
spch
-0.60
>More info
-0.39
>More info
Col-0 WT
whole seedling
Original data
GEO bulk
19
cat2-short-day 2d
-0.53
>More info
-0.46
>More info
Col0-SD2
transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark)
rosette leaf material
Original data
GEO bulk
20
gabaculin
-0.43
>More info
-0.56
>More info
WT Col-0
seedling
Original data
GEO bulk
21
hexa mutant (higher order mutant)
0.63
>More info
0.35
>More info
col control (higher order mutant)
Original data
GEO bulk
22
Col light-dark EtOH
-0.55
>More info
-0.43
>More info
Col light-dark Mock
2.5% ethanol
Original data
GEO bulk
23
IAA7mII over-expressor IAA Treated
0.29
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
24
pip3 At2g19270 RNAi 24
-0.53
>More info
-0.44
>More info
Nd-1
whole plant
Original data
GEO bulk
25
1hr-pH4.5
-0.57
>More info
-0.40
>More info
1hr-pH6
1hr pH 4.5
roots
Original data
GEO bulk
26
DC3000 hrcC 2 h (leaf)
0.59
>More info
0.38
>More info
Mock 2 h (leaf)
Original data
Pseudomonas syringae pv. tomato or pv. phaseolicola
infection
27
0.5h light (+Lincomycin)
0.51
>More info
0.45
>More info
0.5h light (-Lincomycin)
seedlings
Original data
GEO bulk
28
anac017-2 water 3h
-0.66
>More info
-0.29
>More info
WT water 3h
3h_water
Original data
GEO bulk
29
Whole root - S 3H
-0.52
>More info
-0.43
>More info
Whole root - S 0H
Original data
GEO bulk
30
atgsnor1-3-avrB-6h
-0.58
>More info
-0.36
>More info
Col-0-avrB-6h
avrB
leaf tissue
Original data
GEO bulk
31
Col light-light EtOH
-0.62
>More info
-0.31
>More info
Col light-light Mock
2.5% ethanol
Original data
GEO bulk
32
sicy-192 gun1-101 cotyledons
-0.52
>More info
-0.41
>More info
WT cotyledons
cotyledons
Original data
33
OH1
0.54
>More info
0.38
>More info
Col-0
leaves
Original data
GEO bulk
34
elevated CO2 high Mg shoot
0.51
>More info
0.41
>More info
atmospheric CO2 high Mg shoot
Shoot
Original data
35
TNT-seedlings
-0.33
>More info
-0.59
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
36
GR-REV 30min
0.55
>More info
0.36
>More info
Col 30min
Original data
GEO bulk
37
sid2-avrB-6h
-0.53
>More info
-0.38
>More info
Col-0-avrB-6h
avrB
leaf tissue
Original data
GEO bulk
38
IAA/inhibitor A Treated
-0.63
>More info
-0.27
>More info
IAA Treated
Original data
GEO bulk
39
inhibitor A Treated
-0.63
>More info
-0.27
>More info
Negative Control
Original data
GEO bulk
40
Octopus overexpressor 35SDYG25
0.54
>More info
0.36
>More info
WS
Original data
GEO bulk
41
miR mutant (higher order mutant)
0.58
>More info
0.32
>More info
col control (higher order mutant)
Original data
GEO bulk
42
Phytoprostane A1 4 h
-0.50
>More info
-0.39
>More info
Col-0
Original data
GEO bulk
43
mkk2 control rep
0.50
>More info
0.37
>More info
Col-0 Time 0 rep
Original data
GEO bulk
44
Dark 40min pls UV-AB 5min
-0.50
>More info
-0.36
>More info
Dark 45 min
Original data
Light treatments
45
6-trichlorophenoxyacetic acid 3 h
-0.23
>More info
-0.63
>More info
Mock 3 h
Original data
Effect of auxin inhibitors on seedlings
46
Laer pretreat GA Flg22 1h
0.13
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
47
JA
-0.58
>More info
-0.25
>More info
Col-0 mock
Whole seedling
Original data
GEO bulk
48
vtc1-1
0.70
>More info
0.13
>More info
Col-0
whole plant
Original data
GEO bulk
49
ein2-1 24hpi A. brassicicola
-0.50
>More info
-0.32
>More info
Col-0 9 hpi A. brassicicola
3rd-5th true leaves
Original data
50
ABA
-0.52
>More info
-0.29
>More info
control
Original data
GEO bulk
51
gun1gun5 Norflurazon
-0.52
>More info
-0.29
>More info
Norflurazon
a herbicide (Norflurazon)
seedling
Original data
GEO bulk
52
Light 0.5h polysome-bound
-0.25
>More info
-0.56
>More info
Dark polysome-bound
white light
seedlings (aerial parts)
Original data
GEO bulk
53
Col-0 +ABA LF
-0.54
>More info
-0.26
>More info
Col-0 -ABA LF
Leaves of five week-old plants
Original data
GEO bulk
54
Fenclorim 4hr
-0.50
>More info
-0.30
>More info
Acetone 4hr
root
Original data
GEO bulk
55
Sha-3h IAA
0.54
>More info
0.25
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
56
sdg2
0.52
>More info
0.27
>More info
wt
seedling
Original data
GEO bulk
57
rli
-0.50
>More info
-0.29
>More info
WT
whole plant
Original data
GEO bulk
58
Bay-0-3h IAA
0.63
>More info
0.15
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
59
myb61 xylem
-0.21
>More info
-0.57
>More info
wt xylem
xylem
Original data
GEO bulk
60
Laer MeJA 1h
-0.53
>More info
-0.24
>More info
Laer Control
leaf discs
Original data
GEO bulk
61
WT seedlings MV
-0.51
>More info
-0.25
>More info
WT seedlings control
Seedlings
Original data
GEO bulk
62
17 2h total
-0.53
>More info
-0.23
>More info
27 1h total
1.5mM 4SU added at h
whole seedlings floating on MS medium
Original data
63
17 2h labelled
-0.53
>More info
-0.22
>More info
27 1h labelled
1.5mM 4SU added at h
whole seedlings floating on MS medium
Original data
64
Heat shock optimum
0.10
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
65
Hydrogen Peroxide 500 uM
-0.24
>More info
-0.51
>More info
Control RB and PER
Hydrogen Peroxide
Original data
66
Heat no recovery
-0.54
>More info
-0.20
>More info
Mock no recovery
seedling
Original data
GEO bulk
67
hai1-2
-0.71
>More info
-0.03
>More info
control
control
whole seedlings
Original data
GEO bulk
68
ABA+DMTU
-0.50
>More info
-0.24
>More info
control
Original data
GEO bulk
69
Blue Light 4 h
-0.20
>More info
-0.53
>More info
White Light 4 h
Original data
Light treatments
70
Leaf wounded
-0.22
>More info
-0.50
>More info
Leaf control
vegetative leaf
Original data
GEO bulk
71
root longitudinal zone-2 pH 4.6
-0.16
>More info
-0.55
>More info
root longitudinal zone-2 pH 5.7
Original data
GEO bulk
72
WT 3H Cold
-0.16
>More info
-0.54
>More info
WT control
Original data
GEO bulk
73
WT Shoot-Pi
-0.50
>More info
-0.20
>More info
WT Shoot+Pi
shoots
Original data
GEO bulk
74
PNO8 3 h
-0.18
>More info
-0.52
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
75
30m light
-0.12
>More info
-0.58
>More info
before light
whole seedlings
Original data
GEO bulk
76
hai1-2 low water potential
-0.53
>More info
-0.16
>More info
low water potential
low water potential stress
whole seedlings
Original data
GEO bulk
77
17 2h unlabelled
-0.52
>More info
-0.16
>More info
27 1h unlabelled
1.5mM 4SU added at h
whole seedlings floating on MS medium
Original data
78
root stele 40 mM NaCls
-0.57
>More info
-0.11
>More info
root stele
Original data
GEO bulk
79
bri1-116
-0.06
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
80
RRE1 Chitin
-0.51
>More info
-0.15
>More info
Chitin
Original data
GEO bulk
81
ap1-1 cal-1 35S:AGGR +DEX 1d
0.55
>More info
0.11
>More info
Mock 1d
Steroid
Original data
GEO bulk
82
toc1-1-73hr
0.53
>More info
0.13
>More info
WT-untreated-73hr
none
seedlings aerial tissue
Original data
GEO bulk
83
myb61 cork
-0.16
>More info
-0.50
>More info
wt cork
cork
Original data
GEO bulk
84
JMJ24 knockout
0.60
>More info
0.05
>More info
WT
Original data
GEO bulk
85
seedling -S Exp
-0.61
>More info
-0.04
>More info
seedling FN Exp
seedling
Original data
86
NJ15
-0.55
>More info
-0.08
>More info
mock
sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates
Seedlings
Original data
87
60m light
-0.13
>More info
-0.50
>More info
before light
whole seedlings
Original data
GEO bulk
88
4C 2h(SOIL)
-0.10
>More info
-0.53
>More info
4C 0h(SOIL)
Original data
GEO bulk
89
anac017-1 water 3h
-0.50
>More info
-0.10
>More info
WT water 3h
3h_water
Original data
GEO bulk
90
Leafminer damaged seedlings
0.03
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
91
amiR-tor induced 6d
-0.51
>More info
-0.04
>More info
amiR-tor 6d C
6 days estradiol-treated
seedlings
Original data
GEO bulk
92
Shoot apex inflorescence (after bolting)
-0.10
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
93
siliques AtHb1 control
0.03
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
94
GO5; harvested 8h continiously maintained in high
CO2;
-0.56
>More info
0.05
>More info
WT; harvested 8h continiously maintained in high
CO2;
2 whole rosettes
Original data
95
HSP90 Reduced Salk hsp90.3
0.51
>More info
-0.01
>More info
HSP90 Reduced Control
All aerial tissue
Original data
GEO bulk
96
scrm-D:mute
0.50
>More info
-0.02
>More info
Col-0 WT
whole seedling
Original data
GEO bulk
97
CCA1-ox 6am non-polysomal
-0.06
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
98
seed germinating in countinuous light 24h SL
-0.24
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
99
Col0-PsmES4326-24hpi
-0.20
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
100
nas4x leaves + Fe
0.56
>More info
-0.16
>More info
WT leaves + Fe
Leaves
Original data
GEO bulk
101
agb1 -ABA GC
0.56
>More info
-0.18
>More info
Col-0 -ABA GC
Guard cells taken for mature leaves of five week-old plants
Original data
GEO bulk