4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Phytoprostane A1 4 h
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Phytoprostane A1 4 h"  Help Download transcriptome of top 30
Score Experiment Correlation from
Phytoprostane A1 4 h		 Correlation to
Phytoprostane A1 4 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Phytoprostane A1 4 h 1.00 >More info 1.00 >More info Col-0 Original data GEO bulk
2 plant (tga2-5-6) 4h phytoprostane A1 0.87 >More info 0.92 >More info plant (tga2-5-6) 4h control Original data GEO bulk
3 plant (Col-0) 4h phytoprostane A1 0.91 >More info 0.87 >More info plant (tga2-5-6) 4h control Original data GEO bulk
4 5-Triiodobenzoic acid3 h 0.85 >More info 0.88 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 TNT-seedlings 0.79 >More info 0.82 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
6 IAA/inhibitor B Treated 0.79 >More info 0.80 >More info IAA Treated Original data GEO bulk
7 Fenclorim 4hr 0.78 >More info 0.79 >More info Acetone 4hr root Original data GEO bulk
8 inhibitor B Treated 0.78 >More info 0.78 >More info Negative Control Original data GEO bulk
9 (Ws-2)+100 uM As 0.79 >More info 0.74 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
10 SA 0.82 >More info 0.71 >More info WT mock Whole seedling Original data GEO bulk
11 inhibitor A Treated 0.75 >More info 0.77 >More info Negative Control Original data GEO bulk
12 AgNO3 3 h 0.73 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
13 Cocultivation 8 hrs root 0.78 >More info 0.74 >More info Mock cocultivation 8 hrs root Root Original data
14 CMP 4hr 0.78 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
15 Fenclorim 24hr 0.75 >More info 0.73 >More info Acetone 24hr root Original data GEO bulk
16 6-trichlorophenoxyacetic acid 3 h 0.67 >More info 0.81 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
17 WT 30μM arsenate 8 hours. 0.79 >More info 0.68 >More info WT control (not supplemented). Original data
18 Seedling KUA1-IOX est 0.72 >More info 0.75 >More info Seedling KUA1-IOX mock Original data
19 root Dosed gold 0.80 >More info 0.66 >More info root No gold .125 mM gold 24 h roots Original data
20 0.125 mM gold 24 h 0.80 >More info 0.66 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
21 plant (Col-0) 4h OPDA 0.80 >More info 0.65 >More info plant (Col-0) 4h control Original data GEO bulk
22 OPDA 4 h 0.80 >More info 0.65 >More info Col-0 Original data GEO bulk
23 IAA/inhibitor A Treated 0.76 >More info 0.68 >More info IAA Treated Original data GEO bulk
24 WT+H2O2 0.71 >More info 0.73 >More info WT H2O2 Original data GEO bulk
25 cell culture 4 h phytoprostane A1 0.68 >More info 0.76 >More info cell culture 4 h control Original data GEO bulk
26 PNO8 3 h 0.66 >More info 0.77 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
27 Heat and anoxia 0.69 >More info 0.73 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
28 ABA DFPM 0.77 >More info 0.65 >More info control Original data GEO bulk
29 R. solani AG8 0.72 >More info 0.70 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
30 CMP 24hr 0.76 >More info 0.66 >More info Acetone 24hr root Original data GEO bulk
31 dicamba 0.80 >More info 0.62 >More info WT mock whole seedling Original data GEO bulk
32 bak1-3 +Pep2 10h 0.74 >More info 0.67 >More info WT +Pep2 10h Pep2 Original data GEO bulk
33 NJ15 0.64 >More info 0.77 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
34 DFPM 0.77 >More info 0.64 >More info control Original data GEO bulk
35 WT H2O2 3h 0.69 >More info 0.72 >More info WT water 3h 3h_H2O2 Original data GEO bulk
36 Col-0 low oxygen 0.77 >More info 0.63 >More info Col-0 control low oxygen root Original data GEO bulk
37 9 hr Hypoxia 1 hr recovery Total RNA 0.75 >More info 0.63 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
38 (Col-0)+200 uM As 0.68 >More info 0.70 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
39 Nicotinamide-57hr 0.68 >More info 0.70 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
40 gun1gun5 far-red pretreated -0.65 >More info -0.72 >More info WT far-red pretreated Original data GEO bulk
41 Shoot -Cs 0.55 >More info 0.81 >More info Control-shoot Original data GEO bulk
42 plant (tga2-5-6) 4h OPDA 0.74 >More info 0.62 >More info plant (tga2-5-6) 4h control Original data GEO bulk
43 Anoxia 0.69 >More info 0.67 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
44 bbx24 in Simulated Shade -0.76 >More info -0.59 >More info WT in simulated shade shade seedling Original data
45 (Col-0)+100 uM As 0.68 >More info 0.67 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
46 Laer treat paclobutrazol (PAC) 0.67 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
47 oligomycin 4 h 0.71 >More info 0.63 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
48 Ibuprofen 3 h 0.61 >More info 0.73 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
49 Whole root - S 3H 0.63 >More info 0.71 >More info Whole root - S 0H Original data GEO bulk
50 IMI 4mM 0.65 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
51 Nicotinamide-81hr 0.62 >More info 0.71 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
52 gai Control 0.68 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
53 Whole root - low pH 12H 0.63 >More info 0.67 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
54 P.p 30hai 0.75 >More info 0.55 >More info At-Control roots Original data GEO bulk
55 Col-0 HS 0.59 >More info 0.71 >More info Col-0 control heat shocked seedling Original data GEO bulk
56 WT (Col-0) heat shock 0.59 >More info 0.71 >More info WT (Col-0) whole seedling Original data GEO bulk
57 35S::PI ap3-3 35S::AP-GR +DEX 0.59 >More info 0.70 >More info 0hr DEX Original data GEO bulk
58 flu 0.66 >More info 0.62 >More info WT Col Original data GEO bulk
59 embryo paclobutrazol 0.69 >More info 0.58 >More info embryo-control paclobutrazol embryo Original data GEO bulk
60 K starvation (root) 0.60 >More info 0.67 >More info Ws (root) Original data GEO bulk
61 Root -K 0.60 >More info 0.67 >More info Control-root Original data GEO bulk
62 WT seedlings MV 0.65 >More info 0.61 >More info WT seedlings control Seedlings Original data GEO bulk
63 Col-0 under 4 days salt 0.62 >More info 0.64 >More info Col-0 under control 4 days salt treatment rosette Original data
64 Nicotinamide-53hr 0.62 >More info 0.64 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
65 Sulfometuron EC50 0.59 >More info 0.67 >More info Carrier Original data GEO bulk
66 cat2-2; 8h switch to ambient CO2 concentrations; 0.59 >More info 0.66 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
67 coi1-2 0.71 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
68 Ws HS 0.55 >More info 0.69 >More info Ws control heat shocked seedling Original data GEO bulk
69 Col-0 flu HL 3h 0.65 >More info 0.59 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
70 WT AntimycinA 3h 0.67 >More info 0.57 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
71 Roots Cd -0.70 >More info -0.53 >More info Roots control Cd Root Original data GEO bulk
72 seedlings-week-old RECA1-overexpressing
transgenic		 0.61 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
73 Hydrogen Peroxide 500 uM 0.53 >More info 0.70 >More info Control RB and PER Hydrogen Peroxide Original data
74 hira-root -0.63 >More info -0.59 >More info WT-root root Original data
75 9 hr Hypoxia Total RNA 0.72 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
76 safener treated 0.60 >More info 0.62 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
77 toc1-1-53hr 0.59 >More info 0.63 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
78 root cells endodermis 140mM NaCl 3 hours 0.60 >More info 0.61 >More info root cells endodermis standard 1 hour root cells endodermis Original data
79 flu over-tAPX 0.60 >More info 0.61 >More info WT Col Original data GEO bulk
80 root columella root cap 40 mM NaCl 0.64 >More info 0.56 >More info root columella root cap Original data GEO bulk
81 -Sulfate 24 h 0.53 >More info 0.67 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
82 embryo ABA 0.64 >More info 0.56 >More info embryo-control ABA embryo Original data GEO bulk
83 9 hr Hypoxia 1 hr recovery IP RNA 0.67 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
84 Nicotinamide-61hr 0.60 >More info 0.60 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
85 Botrytis cinerea 48h 0.57 >More info 0.63 >More info control 48h Original data GEO bulk
86 toc1-1-85hr 0.50 >More info 0.70 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
87 Col-0 37C 0.56 >More info 0.63 >More info Col-0 22C Original data GEO bulk
88 root stele 40 mM NaCls 0.68 >More info 0.51 >More info root stele Original data GEO bulk
89 BLM+INA 0.62 >More info 0.57 >More info CK BLM and INA seedling Original data
90 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
91 oligomycin 1 h 0.55 >More info 0.64 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
92 root endodermis and quiescent center 40 mM NaCl 0.68 >More info 0.51 >More info root endodermis and quiescent center Original data GEO bulk
93 6h +Pi -0.62 >More info -0.57 >More info 6h -Pi root Original data GEO bulk
94 anac017-2 water 3h 0.50 >More info 0.68 >More info WT water 3h 3h_water Original data GEO bulk
95 spch 0.63 >More info 0.55 >More info Col-0 WT whole seedling Original data GEO bulk
96 sicy-192 gun1-101 cotyledons 0.53 >More info 0.65 >More info WT cotyledons cotyledons Original data
97 csn5 (csn5a-2 csn5b) light 0.59 >More info 0.59 >More info WT light Original data GEO bulk
98 pepr1-1 Pepr2-3 +Pep2 10h -0.58 >More info -0.59 >More info WT +Pep2 10h Pep2 Original data GEO bulk
99 JA 0.62 >More info 0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
100 Heat 0.52 >More info 0.65 >More info Control 90 minutes at 38°C. Original data GEO bulk
101 cat2-short-day 2d 0.53 >More info 0.64 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
102 anac017-2 AntimycinA 3h -0.63 >More info -0.53 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
103 P-chlorophenoxy- isobutyric acid 3 h 0.50 >More info 0.66 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
104 seedling -S Exp 0.56 >More info 0.60 >More info seedling FN Exp seedling Original data
105 Chemically 0.48 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
106 Col-0 0h NAA 0.62 >More info 0.53 >More info Col-0 6h MOCK Original data GEO bulk
107 toc1-1-65hr 0.54 >More info 0.61 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
108 8-DAC chr11-1chr17-1 0.59 >More info 0.56 >More info 8-DAC Col-0 leaf explants Original data
109 UV 0.54 >More info 0.61 >More info WT aerial region Original data GEO bulk
110 DC3000 2 h (leaf) 0.58 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
111 Triazolopyrimidine EC50 0.51 >More info 0.63 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
112 Nicotinamide-65hr 0.60 >More info 0.54 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
113 root cells stele 140mM NaCl 3 hours 0.62 >More info 0.52 >More info root cells stele standard 1 hour root cells stele Original data
114 Nicotinamide-85hr 0.56 >More info 0.57 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
115 P.p 6hai 0.72 >More info 0.41 >More info At-Control roots Original data GEO bulk
116 WT 3h -P 0.57 >More info 0.56 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
117 toc1-1-81hr 0.55 >More info 0.58 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
118 B.cinerea 18 h infection 0.59 >More info 0.54 >More info Mock 18 h Original data Botrytis cinerea infection
119 Botrytis cinerea 18h 0.59 >More info 0.54 >More info control 18h Original data GEO bulk
120 Nicotinamide-73hr 0.58 >More info 0.55 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
121 Osmotic Stress 24 h (shoot) 0.55 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
122 BLM 0.58 >More info 0.54 >More info CK BLM seedling Original data
123 shoots bhlh100/101 0uM Fe 0.68 >More info 0.44 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
124 whole roots 140 mM NaCl 1 hour 0.61 >More info 0.51 >More info whole roots standard Original data GEO bulk
125 35S:RPS4 eds1-2 8h -0.52 >More info -0.60 >More info 35S:RPS4 8h leaves Original data
126 toc1-1-57hr 0.61 >More info 0.50 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
127 Col-Luc WT 3h antimycin A 0.57 >More info 0.54 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
128 GO5; 8h switch to ambient CO2 concentrations; 0.49 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
129 csn3-1 light 0.51 >More info 0.59 >More info WT light Original data GEO bulk
130 Nicotinamide-49hr 0.61 >More info 0.49 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
131 Nicotinamide-89hr 0.56 >More info 0.54 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
132 toc1-1-73hr 0.51 >More info 0.59 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
133 Col-0 9 hpi A. brassicicola 0.55 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
134 WT 24H Cold 0.53 >More info 0.56 >More info WT control Original data GEO bulk
135 8hr-pH4.5 0.51 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
136 Primisulfuron EC50 0.49 >More info 0.60 >More info Carrier (primisulfuron) Original data GEO bulk
137 CeO2 germinant -0.47 >More info -0.62 >More info Millipore Water germinant CeO2 seedling Original data
138 Col-O high light 0.55 >More info 0.53 >More info Col-O bule light Original data GEO bulk
139 nia1nia2 0.57 >More info 0.51 >More info Col-0 whole seedlings Original data GEO bulk
140 gul2-1 mutant 0.60 >More info 0.48 >More info WT 7 day-old whole seedlings Original data
141 4d red light grown hmr-5 seedlings 0.59 >More info 0.49 >More info 4d red light grown WT(Col-0) seedlings Original data
142 Osmotic Stress 24 h (root) 0.59 >More info 0.49 >More info Stress mock 24 h (root) Original data Stress treatments
143 Heat shock optimum 0.43 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
144 msh1 stunt 0.47 >More info 0.61 >More info WT Col-0 above ground part of plant Original data GEO bulk
145 Whole root - low pH 24H 0.53 >More info 0.54 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
146 9 hr Hypoxia IP RNA 0.67 >More info 0.40 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
147 ahg1-1 0.53 >More info 0.54 >More info ABA control Original data GEO bulk
148 Col-0 C2H4 24h 0.51 >More info 0.56 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
149 Salt Stress 24 h (root) 0.56 >More info 0.51 >More info Stress mock 24 h (root) Original data Stress treatments
150 seedlings +5AC 0.60 >More info 0.47 >More info control seedlings 10-day old whole seedling Original data GEO bulk
151 root cells cortex 140mM NaCl 1 hour 0.59 >More info 0.48 >More info root cells cortex standard 1 hour root cells cortex Original data
152 +1.6 mM Tween 20 1 h. 0.57 >More info 0.50 >More info +distilled water 1 h. Original data GEO bulk
153 npr1-3 DCA 48h 0.49 >More info 0.58 >More info npr1-3 MOCK 48h Original data GEO bulk
154 npr1-1 SA -0.57 >More info -0.49 >More info Col-0 SA complete seedling Original data
155 chito-tetramer 0.61 >More info 0.45 >More info Col Mock Original data GEO bulk
156 Col-0-avrB-6h 0.52 >More info 0.54 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
157 Cor 10h 0.48 >More info 0.58 >More info Mock 10h Cor Original data GEO bulk
158 Seedling-HeatStressed TOTALmRNA 0.40 >More info 0.66 >More info Seedling-control TOTALmRNA seedling Original data
159 Seedling-HeatStressed POLYSOMESmRNA 0.40 >More info 0.66 >More info Seedling-control POLYSOMESmRNA seedling Original data
160 rcf1-1 cold 24h 0.56 >More info 0.49 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
161 GST NPP1 4 h (leaf) 0.53 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
162 aox1a:rpoTmp untreated 0.53 >More info 0.52 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
163 root longitudinal zone-4 NaCl 0.54 >More info 0.51 >More info root longitudinal zone-4 Original data GEO bulk
164 ABA control 0.42 >More info 0.63 >More info No ABA control Original data GEO bulk
165 Mutant gh3.5-1D (AvrRpt2) 0.48 >More info 0.57 >More info Col-0 (AvrRpt2) Original data GEO bulk
166 GA4 3 h (ga1 seed) 0.61 >More info 0.43 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
167 SCR-GR Time 12H Dex 0.65 >More info 0.39 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
168 low CO2 + light 0.51 >More info 0.53 >More info normal CO2 + light Original data GEO bulk
169 root epidermis and lateral root cap pH4.6 0.60 >More info 0.44 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
170 Chitosan 3h Treatment 0.52 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
171 dor drought 0.34 >More info 0.70 >More info WT drought Original data GEO bulk
172 toc1-1-77hr 0.57 >More info 0.46 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
173 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.55 >More info 0.48 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
174 Nicotinamide-69hr 0.56 >More info 0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
175 PAHs stress 0.52 >More info 0.51 >More info exp control phenanthrene whole plants Original data GEO bulk
176 Mutant axr3-1 (IAA) 0.39 >More info 0.64 >More info Col (IAA) Original data GEO bulk
177 Whole root - S 24H 0.45 >More info 0.58 >More info Whole root - S 0H Original data GEO bulk
178 ice1 control 0.54 >More info 0.48 >More info WT control Original data GEO bulk
179 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.54 >More info 0.48 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
180 Nicotinamide-93hr 0.52 >More info 0.50 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
181 P.p 2.5hai 0.57 >More info 0.45 >More info At-Control roots Original data GEO bulk
182 seedling 3h after Gamma WT 0.50 >More info 0.52 >More info seedling day 1 unirradiated WT 3h Original data
183 ARR21C-ox 0.64 >More info 0.38 >More info Col-0 Original data ARR21C overexpression
184 ahg2-1sid2-2 0.42 >More info 0.60 >More info WT (Col) control Original data GEO bulk
185 cop1 Seedling BL+ABA 0.47 >More info 0.55 >More info WT Seedling BL+ABA Original data GEO bulk
186 Rose Bengal 0.5 uM 0.42 >More info 0.60 >More info Control RB and PER Rose Bengal Original data
187 phr1 Shoot-Pi 0.64 >More info 0.37 >More info WT Root-Pi shoots Original data GEO bulk
188 10min Reillumination Total RNA -0.52 >More info -0.49 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
189 nia1nia2noa1-2 0.57 >More info 0.44 >More info Col-0 whole seedlings Original data GEO bulk
190 WT Col-0 Bgh inoculated 0.44 >More info 0.57 >More info WT Col-0 Un-inoculated Original data GEO bulk
191 Whole root - low pH 6H 0.46 >More info 0.55 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
192 pepr1-1 Pepr2-3 +Pep2 2h -0.48 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
193 col-5 DC3000 12h 0.45 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
194 pip3 At2g19270 RNAi 32 0.55 >More info 0.45 >More info Nd-1 whole plant Original data GEO bulk
195 AvrRpm1 2 h (leaf) 0.60 >More info 0.40 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
196 ein2-1 9 hpi A. brassicicola 0.50 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
197 root cells endodermis 140mM NaCl 1 hour 0.52 >More info 0.48 >More info root cells endodermis standard 1 hour root cells endodermis Original data
198 2 hr Hypoxia Total RNA 0.60 >More info 0.40 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
199 root stele pH4.6 0.51 >More info 0.49 >More info root stele pH5.7 Original data GEO bulk
200 Col ozone 2d 0.55 >More info 0.45 >More info Col clean-air 2d ozone Original data GEO bulk
201 Dark 40min pls UV-AB 5min 0.56 >More info 0.44 >More info Dark 45 min Original data Light treatments
202 mkk1/mkk2 24h BTH rep 0.50 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
203 Mutant axr3-1 0.41 >More info 0.59 >More info Col Original data GEO bulk
204 roots bhlh100/101 0uM Fe 0.59 >More info 0.40 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
205 chito-octamer 0.54 >More info 0.45 >More info Col Mock Original data GEO bulk
206 P.p 10.5hai 0.67 >More info 0.32 >More info At-Control roots Original data GEO bulk
207 ice1 6H Cold 0.52 >More info 0.47 >More info WT 6H Cold Original data GEO bulk
208 ARR22-ox 0.51 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
209 Col-0 ozone 0.54 >More info 0.45 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
210 sid2-2 9 hpi A. brassicicola 0.53 >More info 0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
211 SCR-GR Time 3H Dex 0.52 >More info 0.47 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
212 HopZ1a treated ulp1c ulp1d 0.45 >More info 0.54 >More info col Original data GEO bulk
213 HopZ1a treated 0.42 >More info 0.57 >More info col Original data GEO bulk
214 Whole root - S 48H 0.45 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
215 4C 1h 0.46 >More info 0.53 >More info 4C 0h Original data GEO bulk
216 Col-0 SA 0.47 >More info 0.52 >More info Col-0 Original data GEO bulk
217 gh3.5-1D 48 hpi 0.47 >More info 0.52 >More info Col-0 uninoculated Original data GEO bulk
218 R. solani AG2-1 0.53 >More info 0.45 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
219 Selenate (root) 0.55 >More info 0.43 >More info Ws (root) Original data GEO bulk
220 Root Selenate 0.55 >More info 0.43 >More info Root control 40 micromolar selenate Root Original data GEO bulk
221 root BA 12h 0.45 >More info 0.53 >More info root control 12h boron (5mM) root Original data GEO bulk
222 pip3 At2g19270 TDNA 9 0.55 >More info 0.42 >More info Col-0 whole plant Original data GEO bulk
223 Leaf GLU1-KO 0.51 >More info 0.46 >More info Leaf Col(0) rosette leaves Original data GEO bulk
224 Te ozone 0.51 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
225 Cold Stress 24 h (root) 0.51 >More info 0.46 >More info Stress mock 24 h (root) Original data Stress treatments
226 rosettes WT drought 0.46 >More info 0.51 >More info rosettes WT watered Original data GEO bulk
227 cat2-short-day 4d 0.35 >More info 0.62 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
228 dark-hs 0.31 >More info 0.66 >More info dark-control seedling Original data
229 aox1a(line) MLD stressed 0.39 >More info 0.58 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
230 toc1-1-49hr 0.56 >More info 0.40 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
231 whole roots 140 mM NaCl 30 minutes 0.51 >More info 0.45 >More info whole roots standard Original data GEO bulk
232 cdkf:1-2 0.53 >More info 0.43 >More info wt seedling young seedlings Original data GEO bulk
233 Dark 40 min pls UV-A 5 min 0.55 >More info 0.41 >More info Dark 45 min Original data Light treatments
234 Root dark control 24h 0.50 >More info 0.46 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
235 root cells cortex 140mM NaCl 3 hours 0.50 >More info 0.45 >More info root cells cortex standard 1 hour root cells cortex Original data
236 ataf1-1 mutant Col-0 Bgh inoculated 0.41 >More info 0.54 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
237 Root -Cs 0.38 >More info 0.57 >More info Control-root Original data GEO bulk
238 cop1 Seedling BL 0.43 >More info 0.52 >More info WT Seedling BL Original data GEO bulk
239 csn4-1 dark 0.36 >More info 0.59 >More info WT light Original data GEO bulk
240 Laer pretreat JA Flg22 0h 0.54 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
241 root cells stele 140mM NaCl 1 hour 0.55 >More info 0.39 >More info root cells stele standard 1 hour root cells stele Original data
242 Leafminer damaged seedlings 0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
243 WT 2-4h Xanthomonas 0.50 >More info 0.44 >More info WT T0 Original data GEO bulk
244 seedling 1.5h after Gamma WT 0.57 >More info 0.37 >More info seedling day 1 unirradiated WT 1.5h Original data
245 ARR22-ox (t-zeatin 3 h) 0.50 >More info 0.44 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
246 ABA 3 h 0.44 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
247 Imidazolinone EC50 0.43 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
248 del1-1 mutant 5d uninfected 0.42 >More info 0.52 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
249 ani1 T16 -0.53 >More info -0.40 >More info WT T16 root tissue Original data GEO bulk
250 whole roots -Fe 48 hour 0.54 >More info 0.39 >More info whole roots standard Original data GEO bulk
251 GST 4 h (leaf) 0.54 >More info 0.39 >More info Mock 4 h (leaf) Original data Elicitor treatments
252 4tga safener -0.37 >More info -0.56 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
253 WT-SA 0.41 >More info 0.52 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
254 IPT8 mutant tZ 12h 0.55 >More info 0.37 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
255 QK HS 0.52 >More info 0.40 >More info QK control heat shocked seedling Original data GEO bulk
256 coi1-16 ein2 sid2 ctrl -0.53 >More info -0.39 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
257 FHY3p dark+DEX -0.54 >More info -0.38 >More info FHY3p dark+mock Original data GEO bulk
258 ABA SA 24h 0.28 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
259 Col ozone 3h 0.36 >More info 0.56 >More info Col clean-air 3h ozone Original data GEO bulk
260 efr-1 +elf18 10h -0.40 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
261 seedling 1.5h after Gamma atm-1 0.37 >More info 0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
262 FarRed Light 4 h 0.42 >More info 0.50 >More info White Light 4 h Original data Light treatments
263 Root wt CLE10 0.34 >More info 0.58 >More info Root wt CLE25 root tip Original data GEO bulk
264 CT101 ozone 0.53 >More info 0.38 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
265 Col-0 2h NAA 0.65 >More info 0.26 >More info Col-0 6h MOCK Original data GEO bulk
266 ANAC102 knock-out low oxygen -0.53 >More info -0.38 >More info Col-0 low oxygen Original data GEO bulk
267 Red/FR Light45min 0.10 >More info 0.81 >More info FarRed Light 45min Original data Light treatments
268 35S:RPS4 eds1-2 24h -0.38 >More info -0.53 >More info 35S:RPS4 24h leaves Original data
269 AsAKiin11 T2 0.26 >More info 0.65 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
270 whole roots -Fe 72 hour 0.50 >More info 0.41 >More info whole roots standard Original data GEO bulk
271 hypoxic 0.50 >More info 0.41 >More info WT aerobic hypoxia Original data GEO bulk
272 Fe starvation 72 h 0.50 >More info 0.41 >More info Control Original data GEO bulk
273 NaCl Col 0.56 >More info 0.34 >More info Col Original data GEO bulk
274 Laer pretreat GA Flg22 1h 0.19 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
275 3m.KCl 0.51 >More info 0.38 >More info To. KCl 14 day old Roots Original data GEO bulk
276 Root dark control 7h 0.50 >More info 0.39 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
277 Salicylic Acid 3 h 0.51 >More info 0.38 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
278 SLWF infested 0.53 >More info 0.36 >More info SLWF uninfested rosette tissue Original data GEO bulk
279 arf2 brz -0.38 >More info -0.51 >More info arf2 mock Original data GEO bulk
280 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
281 PsJN -0.39 >More info -0.50 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
282 rpoTmp(line) MLD stressed 0.37 >More info 0.52 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
283 Col-0 V. longisporum-inoculated 48 hpi 0.39 >More info 0.50 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
284 CLO 4mM 0.58 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
285 cpctry 0.31 >More info 0.58 >More info Col Original data GEO bulk
286 WT-16ºC -0.56 >More info -0.32 >More info WT-23ºC Original data GEO bulk
287 amiR-tor induced 6d 0.54 >More info 0.34 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
288 SA 4mM 0.54 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
289 whole roots -Fe 6 hour 0.32 >More info 0.56 >More info whole roots standard Original data GEO bulk
290 col-5 hrpA 12h 0.34 >More info 0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
291 wrky33 Bc inoculation 14h 0.51 >More info 0.37 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
292 root protophloem 40 mM NaCl 0.51 >More info 0.37 >More info root protophloem Original data GEO bulk
293 9m.KCl 0.53 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
294 24h +Pi -0.57 >More info -0.31 >More info 24h -Pi root Original data GEO bulk
295 Whole root - low pH 3H 0.55 >More info 0.32 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
296 WT NAA/flg 1h 0.50 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk
297 Cor 24h 0.36 >More info 0.51 >More info Mock 24h Cor Original data GEO bulk
298 pmr5 pmr6 0.36 >More info 0.51 >More info Col-0 Original data GEO bulk
299 Col whole leaf 3dpi 0.32 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
300 gpa1-4/agb1-2 ozone 2d -0.30 >More info -0.56 >More info Col ozone 2d ozone Original data GEO bulk
301 Dark 3day ivd 0.50 >More info 0.36 >More info 0h ivd Original data
302 hai1-2 low water potential 0.36 >More info 0.50 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
303 Ws 100mM NaCl 0.54 >More info 0.31 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
304 Ws leaf 100mM NaCl 0.54 >More info 0.31 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
305 NFA8 roots 2hr KNO3 nitrogen 0.54 >More info 0.31 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
306 TAMM27 roots 2hr KNO3 nitrogen 0.52 >More info 0.33 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
307 mp-B4149 mutant IAA 0.55 >More info 0.30 >More info GR-bdl IAA Original data GEO bulk
308 Col whole leaf 5dpi 0.32 >More info 0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
309 sex1-3 0.31 >More info 0.54 >More info Col-WT leaves Original data GEO bulk
310 Col BTH 0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
311 amiR-tor induced 3d 0.35 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
312 DC3000 7h 0.35 >More info 0.50 >More info Mock 7h DC3000 Original data GEO bulk
313 Laer pretreat GA+JA Flg22 0h 0.52 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
314 shoots WT 0uM Fe 0.53 >More info 0.31 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
315 penta Alternaria 3dpi 0.51 >More info 0.33 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
316 PNO8 12 h 0.62 >More info 0.22 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
317 RGA-GR-DEX 0.29 >More info 0.54 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
318 Lipopolysaccaride4 h (leaf) 0.57 >More info 0.26 >More info Mock 4 h (leaf) Original data Elicitor treatments
319 light-hs 0.26 >More info 0.57 >More info light-control seedling Original data
320 COL-0-Fe--root 0.54 >More info 0.28 >More info COL-0-Ctrl--root root Original data
321 shoot-10 μM DEX- 6 hr 0.54 >More info 0.28 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
322 Blue Light 45 min -0.20 >More info -0.62 >More info White Light 45min Original data Light treatments
323 coi1-16 ein2 sid2 ozone 0.50 >More info 0.31 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
324 KAN1-GR 30min 0.50 >More info 0.31 >More info KAN1-GR 0min Original data GEO bulk
325 root - 04% oxygen - 30min -0.52 >More info -0.28 >More info root - 21% oxygen - 30min Original data GEO bulk
326 ein3 eil1 0.64 >More info 0.15 >More info Col-0 mock Whole seedling Original data GEO bulk
327 Mutant cry1 (High Light) -0.28 >More info -0.51 >More info Col-0 (High Light) Original data GEO bulk
328 msh1 variegation Col-0 0.28 >More info 0.51 >More info WT Col-0 above ground part of plant Original data GEO bulk
329 cry1 high light -0.28 >More info -0.51 >More info Col-O high light Original data GEO bulk
330 Col-0 2HS 0.57 >More info 0.22 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
331 roottip hypoxia total 0.57 >More info 0.22 >More info roottip control total Original data GEO bulk
332 RRE1 Chitin 0.51 >More info 0.27 >More info Chitin Original data GEO bulk
333 gai Flg22 1h 0.51 >More info 0.27 >More info Laer Flg22 1h leaf discs Original data GEO bulk
334 SA Treated 0.70 >More info 0.08 >More info Water Original data GEO bulk
335 rao2 AntimycinA 3h -0.55 >More info -0.20 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
336 desiccated mature pollen grains -0.23 >More info -0.52 >More info hydrated pollen grains Original data GEO bulk
337 essp4/sdg8-5 mutant 0.50 >More info 0.24 >More info wild type leaf Original data GEO bulk
338 root hypoxia total 0.60 >More info 0.13 >More info root control total Original data GEO bulk
339 AFB1 0h 0.50 >More info 0.22 >More info Col 0h Leaf Original data GEO bulk
340 Col-0 overexpressing At1g54160 control 0.53 >More info 0.19 >More info WT no treatement Original data GEO bulk
341 root cells epidermis 140mM NaCl 1 hour 0.50 >More info 0.22 >More info root cells epidermis standard 1 hour root cells epidermis Original data
342 AFB1 0h 0.50 >More info 0.22 >More info WT 0h Leaf tissue Original data GEO bulk
343 At1g54160 ox 0.53 >More info 0.19 >More info Col-0 Original data GEO bulk
344 agb1 gpa1 -ABA GC -0.18 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
345 WT roots - Fe 0.54 >More info 0.17 >More info WT roots + Fe Roots Original data GEO bulk
346 ABA JA 24h 0.17 >More info 0.54 >More info EtOH 24h 24hr Original data GEO bulk
347 35S-MIF1 light grown 0.18 >More info 0.52 >More info Light-grown WT control Original data GEO bulk
348 NaCl cpctry 0.18 >More info 0.51 >More info NaCl Col Original data GEO bulk
349 sps1 -0.50 >More info -0.18 >More info WT seedling Original data GEO bulk
350 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
351 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
352 2 hr Hypoxia IP RNA 0.50 >More info 0.16 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
353 Col-0 24hpi A. brassicicola 0.63 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
354 afb3-1 2h KNO3 0.50 >More info 0.14 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
355 3d old, both 10mM sucrose and 0.2µM SMX -0.50 >More info -0.14 >More info control Whole seedling Original data GEO bulk
356 1h +Pi -0.54 >More info -0.09 >More info 1h -Pi root Original data GEO bulk
357 Estradiol4 days 0.13 >More info 0.50 >More info Col Original data GEO bulk
358 estradiol induced LEC1 0.13 >More info 0.50 >More info control Original data GEO bulk
359 FarRed Light 45min 0.01 >More info -0.63 >More info White Light 45min Original data Light treatments
360 ANAC102 over-expressor 0.11 >More info 0.51 >More info C24 Original data GEO bulk
361 IAA 1h -0.55 >More info -0.06 >More info control 1h root Original data GEO bulk
362 Shoot apex inflorescence (after bolting) -0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
363 Col-0 wt Hypoxic 0.53 >More info 0.06 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
364 xyl-grown cell culture- 1h 1mM Fru -0.07 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
365 IRP1-OE-Fe--root -0.50 >More info -0.09 >More info COL-0-Fe--root root Original data
366 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
367 WT heat shock 0.05 >More info 0.51 >More info WT untreated above-ground parts Original data GEO bulk
368 HairpinZ 4 h (leaf) 0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
369 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
370 sng1 UV 0.57 >More info -0.10 >More info UV aerial region Original data GEO bulk
371 Col PSTDC3000 24h 0.57 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
372 pGL3::GL3-GR Dex 24hours -0.11 >More info 0.54 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
373 ABA 0.59 >More info -0.22 >More info control Original data GEO bulk