4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S::PI ap3-3 35S::AP-GR +DEX
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List of experiments correlated with "35S::PI ap3-3 35S::AP-GR +DEX"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S::PI ap3-3 35S::AP-GR +DEX		 Correlation to
35S::PI ap3-3 35S::AP-GR +DEX		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S::PI ap3-3 35S::AP-GR +DEX 1.00 >More info 1.00 >More info 0hr DEX Original data GEO bulk
2 cat2-2; 8h switch to ambient CO2 concentrations; 0.81 >More info 0.81 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
3 Shoot -Cs 0.76 >More info 0.82 >More info Control-shoot Original data GEO bulk
4 5-Triiodobenzoic acid3 h 0.81 >More info 0.75 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 B.cinerea 18 h infection 0.84 >More info 0.69 >More info Mock 18 h Original data Botrytis cinerea infection
6 Botrytis cinerea 18h 0.84 >More info 0.69 >More info control 18h Original data GEO bulk
7 CMP 4hr 0.85 >More info 0.66 >More info Acetone 4hr root Original data GEO bulk
8 GO5; 8h switch to ambient CO2 concentrations; 0.76 >More info 0.75 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
9 Leaf GLU1-KO 0.83 >More info 0.67 >More info Leaf Col(0) rosette leaves Original data GEO bulk
10 flu 0.84 >More info 0.65 >More info WT Col Original data GEO bulk
11 Sulfometuron EC50 0.85 >More info 0.64 >More info Carrier Original data GEO bulk
12 sta1 0.89 >More info 0.59 >More info WT Original data GEO bulk
13 aba3-1 0.71 >More info 0.77 >More info wt Original data GEO bulk
14 ein2-1 9 hpi A. brassicicola 0.81 >More info 0.67 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
15 Botrytis cinerea 48h 0.83 >More info 0.65 >More info control 48h Original data GEO bulk
16 Col-0 9 hpi A. brassicicola 0.81 >More info 0.67 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
17 Fenclorim 4hr 0.83 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
18 flu over-tAPX 0.83 >More info 0.65 >More info WT Col Original data GEO bulk
19 rao2 H2O2 3h -0.83 >More info -0.64 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
20 msh1 recA3 untreated 0.70 >More info 0.77 >More info WT untreated above-ground parts Original data GEO bulk
21 Imidazolinone EC50 0.76 >More info 0.70 >More info Carrier (Imidazolinone) Original data GEO bulk
22 Col leaves 48h LT 0.79 >More info 0.67 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
23 gun1gun5 far-red pretreated -0.83 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
24 S15-118 0.78 >More info 0.66 >More info wt Original data GEO bulk
25 rcf1-1 cold 24h 0.74 >More info 0.69 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
26 seedling 12h after Gamma atm-1 0.74 >More info 0.68 >More info seedling day 1 unirradiated atm-1 12h Original data
27 WT+H2O2 0.81 >More info 0.61 >More info WT H2O2 Original data GEO bulk
28 S58-2 0.76 >More info 0.66 >More info wt Original data GEO bulk
29 AgNO3 3 h 0.80 >More info 0.61 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
30 WT AntimycinA 3h 0.80 >More info 0.60 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
31 oligomycin 4 h 0.75 >More info 0.64 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
32 Primisulfuron EC50 0.74 >More info 0.65 >More info Carrier (primisulfuron) Original data GEO bulk
33 Cor 10h 0.80 >More info 0.59 >More info Mock 10h Cor Original data GEO bulk
34 Col0-PsmES4326-24hpi 0.77 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
35 ataf1-1 mutant Col-0 Bgh inoculated 0.76 >More info 0.62 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
36 Glyphosate EC50 0.83 >More info 0.54 >More info Carrier (Glyphosate) Original data GEO bulk
37 HopZ1a treated 0.81 >More info 0.56 >More info col Original data GEO bulk
38 AvrRpt2 Col-0 6hpi 0.80 >More info 0.56 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
39 sid2-2 9 hpi A. brassicicola 0.80 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
40 aerial organ callus inducing medium 12 h 0.75 >More info 0.61 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
41 rao2 AntimycinA 3h -0.76 >More info -0.60 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
42 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.85 >More info 0.51 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
43 Te ozone 0.81 >More info 0.54 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
44 cell culture 4 h phytoprostane A1 0.77 >More info 0.58 >More info cell culture 4 h control Original data GEO bulk
45 Triazolopyrimidine EC50 0.75 >More info 0.60 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
46 Laer treat paclobutrazol (PAC) 0.82 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
47 WT Col-0 Bgh inoculated 0.74 >More info 0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
48 msh1 recA3 heat shock 0.66 >More info 0.68 >More info WT heat shock above-ground parts Original data GEO bulk
49 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.81 >More info 0.53 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
50 R. solani AG8 0.78 >More info 0.56 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
51 35S:RPS4 eds1-2 8h -0.81 >More info -0.53 >More info 35S:RPS4 8h leaves Original data
52 Phaseolicola 2 h (leaf) 0.75 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
53 cat2-short-day 4d 0.72 >More info 0.62 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
54 DC3000 2 h (leaf) 0.76 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
55 cdpk6-yfp 0.69 >More info 0.64 >More info Kan seedlings Original data GEO bulk
56 col-5 DC3000 12h 0.74 >More info 0.59 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
57 S14-150 0.68 >More info 0.64 >More info wt Original data GEO bulk
58 dde2-2 9 hpi A. brassicicola 0.78 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
59 plant (tga2-5-6) 4h phytoprostane A1 0.76 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
60 GST 4 h (leaf) 0.77 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
61 Col-Luc WT 3h antimycin A 0.80 >More info 0.52 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
62 CT101 ozone 0.84 >More info 0.48 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
63 NJ15 0.72 >More info 0.60 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
64 col-5 hrpA 12h 0.73 >More info 0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
65 TNT-seedlings 0.71 >More info 0.60 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
66 Col-0-avrB-6h 0.80 >More info 0.50 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
67 Cor 24h 0.69 >More info 0.61 >More info Mock 24h Cor Original data GEO bulk
68 UV 0.83 >More info 0.47 >More info WT aerial region Original data GEO bulk
69 Naphthyl- phthalamic acid 3 h 0.73 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
70 Phytoprostane A1 4 h 0.70 >More info 0.59 >More info Col-0 Original data GEO bulk
71 Seedling KUA1-IOX est 0.70 >More info 0.59 >More info Seedling KUA1-IOX mock Original data
72 cpr5npr1svi1 0.60 >More info 0.69 >More info WT(COL) Original data GEO bulk
73 seedling 1.5h after Gamma atm-1 0.80 >More info 0.49 >More info seedling day 1 unirradiated atm-1 1.5h Original data
74 anac017-1 AntimycinA 3h -0.65 >More info -0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
75 WT H2O2 3h 0.78 >More info 0.50 >More info WT water 3h 3h_H2O2 Original data GEO bulk
76 Col-0 mbs1-1 HL 0h 0.79 >More info 0.49 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
77 Tsu -Fe 24h Roots 0.67 >More info 0.60 >More info Tsu +Fe 24h Roots Original data GEO bulk
78 csn5 (csn5a-2 csn5b) light 0.80 >More info 0.47 >More info WT light Original data GEO bulk
79 oligomycin 1 h 0.54 >More info 0.73 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
80 Tsu-1 -Fe 24h 0.67 >More info 0.60 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
81 6h +Pi -0.80 >More info -0.47 >More info 6h -Pi root Original data GEO bulk
82 ice1 6H Cold 0.74 >More info 0.52 >More info WT 6H Cold Original data GEO bulk
83 vte2-1 3d vernalization 0.75 >More info 0.51 >More info WT 3d vernalization Original data GEO bulk
84 UV Stress 24 h (shoot) 0.74 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
85 root cortex pH4.6 0.71 >More info 0.55 >More info root cortex pH5.7 Original data GEO bulk
86 rao1-2 3h antimycin A -0.74 >More info -0.51 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
87 root Dosed gold 0.77 >More info 0.48 >More info root No gold .125 mM gold 24 h roots Original data
88 inhibitor A Treated 0.72 >More info 0.53 >More info Negative Control Original data GEO bulk
89 0.125 mM gold 24 h 0.77 >More info 0.48 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
90 Wt-BA-sample 0.70 >More info 0.55 >More info Wt-dmso-sample seedling Original data
91 Lipopolysaccaride4 h (leaf) 0.84 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
92 ice1 control 0.73 >More info 0.51 >More info WT control Original data GEO bulk
93 Elevated CO2 AMPLE N NIGHT 0.62 >More info 0.62 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
94 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.77 >More info 0.47 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
95 msh1 albino 0.65 >More info 0.59 >More info WT aerial part Original data GEO bulk
96 gh3.5-1D 48 hpi 0.70 >More info 0.54 >More info Col-0 uninoculated Original data GEO bulk
97 C24 ozone 0.77 >More info 0.47 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
98 gai Control 0.79 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
99 +1.6 mM Tween 20 1 h. 0.71 >More info 0.53 >More info +distilled water 1 h. Original data GEO bulk
100 Whole root - S 3H 0.70 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
101 PAHs stress 0.71 >More info 0.53 >More info exp control phenanthrene whole plants Original data GEO bulk
102 IMI 4mM 0.77 >More info 0.47 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
103 35S:RPS4 eds1-2 24h -0.71 >More info -0.52 >More info 35S:RPS4 24h leaves Original data
104 ceh1 mutant 0.71 >More info 0.52 >More info Parent line Original data
105 WT-SA 0.65 >More info 0.58 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
106 WT powdery mildew 0.63 >More info 0.60 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
107 DFPM 0.79 >More info 0.44 >More info control Original data GEO bulk
108 ARR21C-ox 0.85 >More info 0.38 >More info Col-0 Original data ARR21C overexpression
109 seedlings-week-old RECA1-overexpressing
transgenic		 0.64 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
110 DC3000 24h 0.61 >More info 0.62 >More info Mock 24h DC3000 Original data GEO bulk
111 12h Col-0 0.56 >More info 0.66 >More info 00h Col-0 Original data GEO bulk
112 RPL18 TuMV inoculated total RNA 0.66 >More info 0.56 >More info mock inoculated total RNA PO Original data GEO bulk
113 anac017-1 H2O2 3h -0.72 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
114 HopZ1a treated ulp1c ulp1d 0.73 >More info 0.49 >More info col Original data GEO bulk
115 Col-0 ozone 0.77 >More info 0.45 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
116 Laer Flg22+GA 2h 0.75 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
117 Col-0 flu HL 3h 0.78 >More info 0.43 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
118 abi4 vtc2 (I) 0.59 >More info 0.62 >More info Col (I) rosette Original data GEO bulk
119 16h Col-0 0.47 >More info 0.74 >More info 00h Col-0 Original data GEO bulk
120 csn3-1 light 0.80 >More info 0.40 >More info WT light Original data GEO bulk
121 pnp1-1 1wk -P 0.67 >More info 0.53 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
122 apum23 0.68 >More info 0.52 >More info WT (Col-3) aerial parts Original data GEO bulk
123 D2O 0.66 >More info 0.54 >More info H2O seedling Original data GEO bulk
124 inhibitor B Treated 0.66 >More info 0.54 >More info Negative Control Original data GEO bulk
125 CMP 24hr 0.68 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
126 ice1 24H Cold 0.71 >More info 0.49 >More info WT 24H Cold Original data GEO bulk
127 Cocultivation 8 hrs root 0.73 >More info 0.47 >More info Mock cocultivation 8 hrs root Root Original data
128 Col-0 under 4 days salt 0.78 >More info 0.41 >More info Col-0 under control 4 days salt treatment rosette Original data
129 toc1-1-77hr 0.62 >More info 0.57 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
130 aox1a:rpoTmp untreated 0.66 >More info 0.53 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
131 6-trichlorophenoxyacetic acid 3 h 0.68 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
132 Col ozone 3h 0.73 >More info 0.46 >More info Col clean-air 3h ozone Original data GEO bulk
133 Col whole leaf 5dpi 0.61 >More info 0.58 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
134 npr1-1 SA -0.78 >More info -0.40 >More info Col-0 SA complete seedling Original data
135 WT seedlings MV 0.63 >More info 0.55 >More info WT seedlings control Seedlings Original data GEO bulk
136 GST NPP1 4 h (leaf) 0.68 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
137 Dex-rga(delta17) 2h GA4+DEX -0.66 >More info -0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
138 PNO8 3 h 0.79 >More info 0.39 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
139 WT 3h -P 0.67 >More info 0.51 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
140 Root -Cs 0.77 >More info 0.41 >More info Control-root Original data GEO bulk
141 bak1-3 +Pep2 10h 0.77 >More info 0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
142 Differentiation 12h 0.60 >More info 0.58 >More info Differentiation 0h leaves Original data
143 WT 30μM arsenate 8 hours. 0.75 >More info 0.43 >More info WT control (not supplemented). Original data
144 sicy-192 gun1-101 cotyledons 0.70 >More info 0.48 >More info WT cotyledons cotyledons Original data
145 cpr5scv1 0.58 >More info 0.59 >More info WT(COL) Original data GEO bulk
146 PBZ 0.55 >More info 0.62 >More info none PBZ Rosette Original data GEO bulk
147 SA 0.74 >More info 0.43 >More info WT mock Whole seedling Original data GEO bulk
148 seedling 6h after HZE atm-1 0.64 >More info 0.53 >More info seedling day 1 unirradiated atm-1 6h Original data
149 cpr5npr1 0.62 >More info 0.55 >More info WT(COL) Original data GEO bulk
150 M6PR transgenic leaf 100mM NaCl -0.71 >More info -0.46 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
151 ARR22-ox 0.69 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
152 seedling 12h after HZE atm-1 0.57 >More info 0.60 >More info seedling day 1 unirradiated atm-1 12h Original data
153 col-5 DC3000-avrRpm 4h 0.68 >More info 0.49 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
154 Whole root - low pH 12H 0.71 >More info 0.46 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
155 rcf1-1 cold 0h 0.69 >More info 0.48 >More info WT cold 0h Control seedlings Original data GEO bulk
156 vtc2 (I) 0.56 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
157 mkk1/mkk2 24h BTH rep 0.78 >More info 0.38 >More info Col-0 24h BTH rep Original data GEO bulk
158 wavy 0.59 >More info 0.57 >More info WT Original data GEO bulk
159 coi1-16 ein2 sid2 ozone 0.73 >More info 0.43 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
160 short 12-degree- 0.62 >More info 0.53 >More info control short Original data GEO bulk
161 Fenclorim 24hr 0.72 >More info 0.43 >More info Acetone 24hr root Original data GEO bulk
162 CMV-WT 0.67 >More info 0.48 >More info Mock-At Aerial tissues Original data GEO bulk
163 Leafminer damaged seedlings 0.59 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
164 Norflurazon 0.63 >More info 0.52 >More info Col-0 Original data GEO bulk
165 scrm-D 0.72 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
166 pnp1-1 3h +P 0.75 >More info 0.40 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
167 9 hr Hypoxia 1 hr recovery Total RNA 0.72 >More info 0.43 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
168 A. thaliana-A. lyrata hybrid -0.66 >More info -0.49 >More info A. thaliana mature leaves before flowering Original data GEO bulk
169 Mutant gh3.5-1D (AvrRpt2) 0.64 >More info 0.51 >More info Col-0 (AvrRpt2) Original data GEO bulk
170 Cold Stress 24 h (shoot) 0.67 >More info 0.48 >More info Stress mock 24 h (shoot) Original data Stress treatments
171 safener treated 0.69 >More info 0.46 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
172 nia1nia2 0.74 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
173 Norflurazon 0.63 >More info 0.52 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
174 hst5 0.64 >More info 0.50 >More info Col-0 Original data GEO bulk
175 AvrRpm1 2 h (leaf) 0.67 >More info 0.47 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
176 abh1 -ABA 0.65 >More info 0.49 >More info Col-0 -ABA Original data GEO bulk
177 atsf1-2 mutant seedling 0.67 >More info 0.47 >More info Col-0 seedling seedlings Original data
178 coi1-16 ein2 sid2 ctrl -0.68 >More info -0.46 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
179 seedling 24h after HZE WT 0.70 >More info 0.44 >More info seedling day 2 unirradiated WT 24h Original data
180 rcf1-1 cold 12h 0.70 >More info 0.44 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
181 20h Col-0 0.45 >More info 0.69 >More info 00h Col-0 Original data GEO bulk
182 35S::HRE1 Hypoxic -0.72 >More info -0.41 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
183 ice1 3H Cold 0.69 >More info 0.44 >More info WT 3H Cold Original data GEO bulk
184 efr-1 +elf18 10h -0.62 >More info -0.51 >More info WT +elf18 10h elf18 Original data GEO bulk
185 whole roots -Fe 48 hour 0.66 >More info 0.47 >More info whole roots standard Original data GEO bulk
186 Laer Flg22 2h 0.69 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
187 9 hr Hypoxia 1 hr recovery IP RNA 0.72 >More info 0.41 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
188 SLWF infested 0.55 >More info 0.58 >More info SLWF uninfested rosette tissue Original data GEO bulk
189 Selenate (shoot) 0.79 >More info 0.33 >More info Ws (shoot) Original data GEO bulk
190 RPL18 TuMV inoculated polysomal RNA 0.63 >More info 0.49 >More info mock inoculated polysomal RNA PO Original data GEO bulk
191 Nicotinamide-49hr 0.75 >More info 0.37 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
192 npr1-3 DCA 48h 0.60 >More info 0.52 >More info npr1-3 MOCK 48h Original data GEO bulk
193 WT flg22 2h 0.63 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
194 atgsnor1-3-avrB-6h 0.68 >More info 0.44 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
195 Shoot Selenate 0.79 >More info 0.33 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
196 JA 0.70 >More info 0.42 >More info Col-0 mock Whole seedling Original data GEO bulk
197 Mutant siz1-3 (Drought) 0.69 >More info 0.43 >More info Col-0 (Drought) Original data GEO bulk
198 (Col-0)+100 uM As 0.69 >More info 0.43 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
199 siz1-3 drought 0.69 >More info 0.43 >More info Col-0 drought Original data GEO bulk
200 (Ws-2)+100 uM As 0.66 >More info 0.45 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
201 Col whole leaf 7dpi 0.55 >More info 0.56 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
202 WT in -N 0.65 >More info 0.46 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
203 arf2 brz -0.66 >More info -0.45 >More info arf2 mock Original data GEO bulk
204 Leafminer locally damaged thaliana seedlings 0.59 >More info 0.52 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
205 9 hr Hypoxia IP RNA 0.73 >More info 0.38 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
206 Pst-DC3000(avrRpm1)-4hpi 0.58 >More info 0.53 >More info Pst-DC3000-4hpi Original data GEO bulk
207 mil4 BTH 0.57 >More info 0.54 >More info Col BTH rosettes Original data GEO bulk
208 MYB29 OE 0.64 >More info 0.47 >More info WT for MYB29/76 Original data GEO bulk
209 pnp1-1 1wk +P 0.70 >More info 0.41 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
210 cat2-short-day 2d 0.71 >More info 0.40 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
211 Mutant arf2-6 -0.63 >More info -0.47 >More info Col Original data GEO bulk
212 Mutant cry1 -0.63 >More info -0.47 >More info Col-0 Original data GEO bulk
213 Ibuprofen 3 h 0.71 >More info 0.39 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
214 hrcC 0.63 >More info 0.47 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
215 aerial organ callus inducing medium 24h 0.65 >More info 0.45 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
216 MYB76 OE 0.66 >More info 0.44 >More info WT for MYB29/76 Original data GEO bulk
217 plant (Col-0) 4h phytoprostane A1 0.59 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
218 cry1 low light -0.63 >More info -0.47 >More info Col-O low light Original data GEO bulk
219 anac017-2 AntimycinA 3h -0.49 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
220 ws 24h4c q8ws 0.76 >More info 0.33 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
221 shoots bhlh100/101 0uM Fe 0.79 >More info 0.30 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
222 eif3h 0.64 >More info 0.45 >More info WT Original data GEO bulk
223 nia1nia2noa1-2 0.77 >More info 0.32 >More info Col-0 whole seedlings Original data GEO bulk
224 Heat shock optimum 0.44 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
225 WT 2-4h Xanthomonas 0.60 >More info 0.49 >More info WT T0 Original data GEO bulk
226 Col-0 low oxygen 0.62 >More info 0.47 >More info Col-0 control low oxygen root Original data GEO bulk
227 essp4/sdg8-5 mutant 0.83 >More info 0.26 >More info wild type leaf Original data GEO bulk
228 Laer Flg22+GA 1h 0.71 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
229 opr3 OPDA 2 h 0.47 >More info 0.62 >More info opr3 0 h Original data GEO bulk
230 Laer Flg22 1h 0.73 >More info 0.35 >More info Laer Control leaf discs Original data GEO bulk
231 abi4-102 (I) 0.56 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
232 8hr-pH4.5 0.66 >More info 0.42 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
233 sicy-192 cotyledons 0.54 >More info 0.54 >More info WT cotyledons cotyledons Original data
234 dde2-2 24hpi A. brassicicola -0.54 >More info -0.54 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
235 Mutant siz1-3 0.57 >More info 0.51 >More info Col-0 Original data GEO bulk
236 root endodermis and quiescent center pH4.6 0.54 >More info 0.54 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
237 col 24h4c set4 0.61 >More info 0.47 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
238 siz1-3 control 0.57 >More info 0.51 >More info Col-0 control Original data GEO bulk
239 cpr5 0.56 >More info 0.52 >More info WT seedling Original data GEO bulk
240 penta Alternaria 3dpi 0.60 >More info 0.48 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
241 mkk1/mkk2 control rep 0.64 >More info 0.44 >More info Col-0 Time 0 rep Original data GEO bulk
242 wrky33 Bc inoculation 14h 0.74 >More info 0.33 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
243 Mutant cry1 (High Light) -0.68 >More info -0.39 >More info Col-0 (High Light) Original data GEO bulk
244 WT cold 0.62 >More info 0.45 >More info WT control All aerial tissue Original data GEO bulk
245 Shoot -K 0.74 >More info 0.33 >More info Control-shoot Original data GEO bulk
246 K starvation (shoot) 0.74 >More info 0.33 >More info Ws (shoot) Original data GEO bulk
247 cry1 high light -0.68 >More info -0.39 >More info Col-O high light Original data GEO bulk
248 08h Col-0 0.44 >More info 0.63 >More info 00h Col-0 Original data GEO bulk
249 Dex-rga(delta17) 4h GA4+DEX -0.59 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
250 ahg2-1sid2-2 0.57 >More info 0.50 >More info WT (Col) control Original data GEO bulk
251 Col-0 low oxygen 0.59 >More info 0.48 >More info Col-0 Original data GEO bulk
252 2 h EST 0.47 >More info 0.60 >More info mock 2 h EST seedling Original data GEO bulk
253 WT 1wk -P 0.69 >More info 0.37 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
254 WT mitomycin C 0.69 >More info 0.37 >More info WT mock shoot apical meristem Original data
255 Time-0 chr11-1chr17-1 -0.62 >More info -0.44 >More info Time-0 Col-0 leaf explants Original data
256 Cycloheximide 3 h 0.59 >More info 0.47 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
257 (Col-0)+200 uM As 0.63 >More info 0.43 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
258 upf3 0.61 >More info 0.45 >More info WT whole plant Original data GEO bulk
259 root epidermis and lateral root cap pH4.6 0.53 >More info 0.53 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
260 seedlings protease IV 0.48 >More info 0.58 >More info seedlings nontreated control whole seedling Original data
261 Atwrky63 -0.64 >More info -0.41 >More info Col0 none leaf Original data GEO bulk
262 brm-101 0.66 >More info 0.39 >More info Ler Original data GEO bulk
263 Nicotinamide-53hr 0.74 >More info 0.31 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
264 sni1 0.61 >More info 0.44 >More info WT Original data GEO bulk
265 pvip1 pvip2 0.56 >More info 0.49 >More info Col-0 whole rosettes Original data GEO bulk
266 sfr3 control 0.66 >More info 0.39 >More info WT control All aerial tissue Original data GEO bulk
267 Hydrogen Peroxide 500 uM 0.52 >More info 0.53 >More info Control RB and PER Hydrogen Peroxide Original data
268 Osmotic Stress 24 h (shoot) 0.60 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
269 Salt Stress 24 h (shoot) 0.63 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
270 whole roots -Fe 72 hour 0.63 >More info 0.41 >More info whole roots standard Original data GEO bulk
271 shoot control pSultr2:2 -0.85 >More info -0.19 >More info shoot control total Original data GEO bulk
272 albino Ds13-2198-1 -0.59 >More info -0.45 >More info control Original data GEO bulk
273 R. solani AG2-1 0.50 >More info 0.54 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
274 Fe starvation 72 h 0.63 >More info 0.41 >More info Control Original data GEO bulk
275 SPT4-R3 seedlings0 DAS 0.69 >More info 0.35 >More info Col-0 seedlings0 DAS seedlings Original data
276 HSP90 Reduced RNAi-B1 0.77 >More info 0.27 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
277 OH1 0.52 >More info 0.52 >More info Col-0 leaves Original data GEO bulk
278 G3P 0.61 >More info 0.43 >More info Mock distal leaves Original data GEO bulk
279 shoot-10 μM DEX- 3 hr 0.66 >More info 0.37 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
280 Col-0 SA 0.63 >More info 0.40 >More info Col-0 water complete seedling Original data
281 1h light (+Lincomycin) 0.58 >More info 0.45 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
282 Col-O high light 0.63 >More info 0.40 >More info Col-O bule light Original data GEO bulk
283 WT cold 12 h 0.50 >More info 0.53 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
284 COL-0-Fe--shoot 0.72 >More info 0.31 >More info COL-0-Ctrl--shoot shoot Original data
285 ARR22-ox (t-zeatin 3 h) 0.67 >More info 0.36 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
286 ahg2-1 0.48 >More info 0.55 >More info WT (Col) control Original data GEO bulk
287 pepr1-1 Pepr2-3 +Pep2 2h -0.48 >More info -0.55 >More info WT +Pep2 2h Pep2 Original data GEO bulk
288 Whole root - low pH 24H 0.59 >More info 0.43 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
289 E.coli TUV86 2 fliC 7h 0.59 >More info 0.43 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
290 sfr3 cold 0.71 >More info 0.31 >More info WT cold All aerial tissue Original data GEO bulk
291 pmr5 pmr6 0.54 >More info 0.48 >More info Col-0 Original data GEO bulk
292 root columella root cap 40 mM NaCl 0.69 >More info 0.33 >More info root columella root cap Original data GEO bulk
293 Pto inoculated 0.61 >More info 0.41 >More info col Original data GEO bulk
294 sdg2 0.53 >More info 0.49 >More info wt seedling Original data GEO bulk
295 cpr5 0.52 >More info 0.50 >More info WT(COL) Original data GEO bulk
296 Col leaves 120h LT 0.54 >More info 0.48 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
297 Paclobutrazol 3 h 0.54 >More info 0.48 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
298 Col-0 drought 0.60 >More info 0.42 >More info Col-0 control Original data GEO bulk
299 WT +elf18 10h 0.46 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
300 FAMA induced 48h 0.69 >More info 0.32 >More info control 48h Whole seedling Original data GEO bulk
301 CLO 4mM 0.68 >More info 0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
302 arp6-10 2h 27 -degree-C 0.60 >More info 0.41 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
303 WT Bc inoculation 14h 0.65 >More info 0.36 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
304 Col-0 V. longisporum-inoculated 48 hpi 0.56 >More info 0.45 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
305 hypoxic 0.55 >More info 0.46 >More info WT aerobic hypoxia Original data GEO bulk
306 det2 light-dark -0.54 >More info -0.47 >More info det2 light light-dark Original data GEO bulk
307 seedling 24h after Gamma WT 0.69 >More info 0.32 >More info seedling day 2 unirradiated WT 24h Original data
308 IAA/inhibitor B Treated 0.52 >More info 0.49 >More info IAA Treated Original data GEO bulk
309 Light 3day wt -0.56 >More info -0.45 >More info 0h wt Original data
310 seedling 1.5h after Gamma WT 0.57 >More info 0.44 >More info seedling day 1 unirradiated WT 1.5h Original data
311 aerial organ callus inducing medium 48 h 0.60 >More info 0.41 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
312 HSP90 Reduced RNAi-A2 0.79 >More info 0.22 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
313 Wounding Stress3 h (root) -0.63 >More info -0.37 >More info Stress mock 3 h (root) Original data Stress treatments
314 4C 7d(SOIL) 0.64 >More info 0.36 >More info 4C 0h(SOIL) Original data GEO bulk
315 Col-0 +lincomycin 0.61 >More info 0.39 >More info Col-0 -lincomycin Original data GEO bulk
316 root columella root cap pH4.6 0.75 >More info 0.25 >More info root columella root cap pH5.7 Original data GEO bulk
317 cop1 Seedling BL+ABA 0.64 >More info 0.36 >More info WT Seedling BL+ABA Original data GEO bulk
318 gpa1-4/agb1-2 ozone 2d -0.58 >More info -0.42 >More info Col ozone 2d ozone Original data GEO bulk
319 Col ozone 2d 0.54 >More info 0.46 >More info Col clean-air 2d ozone Original data GEO bulk
320 Cor hrpS 10h 0.64 >More info 0.36 >More info Mock 10h Cor hrpS Original data GEO bulk
321 Anoxia 0.60 >More info 0.40 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
322 pmr5 0.52 >More info 0.48 >More info Col-0 Original data GEO bulk
323 P.syringae AvrRpt2 4 h (leaf) 0.69 >More info 0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
324 hrpA 7h 0.51 >More info 0.49 >More info Mock 7h hrpA Original data GEO bulk
325 low water potential 0.67 >More info 0.33 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
326 atmospheric CO2 low Mg shoot 0.71 >More info 0.29 >More info atmospheric CO2 normal Mg shoot Shoot Original data
327 del1-1 mutant 5d uninfected 0.51 >More info 0.48 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
328 ga1-3/brm-1 0.72 >More info 0.27 >More info wt shoots Original data GEO bulk
329 cngc1-3 0.67 >More info 0.32 >More info Col-0 root Original data GEO bulk
330 Col-0 norflurazon 0.66 >More info 0.33 >More info Col-0 control Original data GEO bulk
331 ulp1c ulp1d +Pto 0.54 >More info 0.45 >More info ulp1c ulp1d mock Original data GEO bulk
332 Flagellin 4 h (leaf) 0.61 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
333 Uniconazole 3 h 0.67 >More info 0.32 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
334 Heat shock 20%Inhibition 0.61 >More info 0.38 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
335 8h-DC3000 avrRpm1 0.74 >More info 0.25 >More info 8h-DC3000 leaves Original data GEO bulk
336 MIL4 ox BTH 0.41 >More info 0.58 >More info Col BTH Original data GEO bulk
337 coi1-2 0.58 >More info 0.40 >More info Col-0 mock Whole seedling Original data GEO bulk
338 seedling 6h after Gamma atm-1 0.55 >More info 0.43 >More info seedling day 1 unirradiated atm-1 6h Original data
339 seedling 6h after HZE WT 0.55 >More info 0.43 >More info seedling day 1 unirradiated WT 6h Original data
340 cdkf:1-2 0.70 >More info 0.28 >More info wt seedling young seedlings Original data GEO bulk
341 GRX-overexpression seedlings control 0.72 >More info 0.26 >More info WT seedlings control Seedlings Original data GEO bulk
342 Bur-0-3h IAA 0.59 >More info 0.39 >More info Bur-0h IAA whole plant Original data GEO bulk
343 3d old, both 10mM sucrose and 0.2µM SMX 0.65 >More info 0.33 >More info control Whole seedling Original data GEO bulk
344 Mutant iaa5_6_19 0.48 >More info 0.50 >More info Col Original data GEO bulk
345 smg7b-1 0.48 >More info 0.50 >More info WT whole plant Original data GEO bulk
346 seedling 12h after Gamma WT 0.34 >More info 0.64 >More info seedling day 1 unirradiated WT 12h Original data
347 Propiconazole 3 h 0.80 >More info 0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
348 pil5 red light 0.79 >More info 0.18 >More info Col-0 red light Original data GEO bulk
349 arf2 mock 0.52 >More info 0.45 >More info Col mock Original data GEO bulk
350 Mature callus 0.55 >More info 0.42 >More info Young callus hypocotyls Original data GEO bulk
351 OE WRKY40.4 high light 0.52 >More info 0.45 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
352 Mutant arf2 (etiol) 0.52 >More info 0.45 >More info Col (etiol) Original data GEO bulk
353 WT flg22 1h 0.64 >More info 0.33 >More info WT 0h Leaf tissue Original data GEO bulk
354 amiR-tor induced 6d 0.54 >More info 0.43 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
355 nas4x leaves - Fe -0.67 >More info -0.30 >More info WT leaves - Fe Leaves Original data GEO bulk
356 WT 1mM phosphate 8 hours. -0.60 >More info -0.37 >More info WT control (not supplemented). Original data
357 SA 4mM 0.67 >More info 0.30 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
358 aerial organ callus inducing medium 96 h 0.56 >More info 0.41 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
359 Col-0 DCA 48h 0.47 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
360 oas-a1.1 Cd 24h 0.45 >More info 0.52 >More info Cd 24h root Shoot Original data GEO bulk
361 35S::HRE2 Aerobic -0.80 >More info -0.16 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
362 COL-0-Fe--root 0.68 >More info 0.28 >More info COL-0-Ctrl--root root Original data
363 root stele pH4.6 0.40 >More info 0.56 >More info root stele pH5.7 Original data GEO bulk
364 per1 in control medium 0.57 >More info 0.39 >More info Col in control medium root Original data GEO bulk
365 WT cold 24h 0.52 >More info 0.44 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
366 oas-a1.1 Cd 18h 0.61 >More info 0.35 >More info Cd 18h root Root Original data GEO bulk
367 phr1 phl1 Root-Pi 0.67 >More info 0.29 >More info WT Shoot+Pi roots Original data GEO bulk
368 toc1-1-49hr 0.39 >More info 0.57 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
369 siliques AtHb1 hypoxia 0.56 >More info 0.39 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
370 CCA14 dark early -0.55 >More info -0.40 >More info Col dark early Original data GEO bulk
371 rosette Dark Wounded 0.55 >More info 0.40 >More info rosette Dark Control Original data GEO bulk
372 long 14-degree- 0.67 >More info 0.28 >More info control long Original data GEO bulk
373 Whole root - S 12H 0.56 >More info 0.39 >More info Whole root - S 0H Original data GEO bulk
374 sid2-1 cold -0.40 >More info -0.55 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
375 Brz220 3 h 0.69 >More info 0.26 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
376 Heat and anoxia 0.61 >More info 0.34 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
377 Col-0 overexpressing At1g54160 control 0.63 >More info 0.32 >More info WT no treatement Original data GEO bulk
378 Col whole leaf amplified 5 dpi 0.52 >More info 0.43 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
379 ABA DFPM 0.65 >More info 0.30 >More info control Original data GEO bulk
380 At1g54160 ox 0.63 >More info 0.32 >More info Col-0 Original data GEO bulk
381 9m.KCl 0.55 >More info 0.39 >More info To. KCl 14 day old Roots Original data GEO bulk
382 cs26 long day 0.66 >More info 0.28 >More info Leaves-WT-LD leaf Original data GEO bulk
383 Cambium 5 days NAA 0.56 >More info 0.38 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
384 long 12-degree- 0.58 >More info 0.36 >More info control long Original data GEO bulk
385 Col-0 HS 0.53 >More info 0.41 >More info Col-0 control heat shocked seedling Original data GEO bulk
386 WT (Col-0) heat shock 0.53 >More info 0.41 >More info WT (Col-0) whole seedling Original data GEO bulk
387 35S:VND7-VP16-GR+CHX 0.51 >More info 0.43 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
388 lht1 PstDC3000 48h 0.51 >More info 0.43 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
389 RGA-GR-DEX 0.57 >More info 0.37 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
390 IRP1-OE-Ctrl--shoot 0.62 >More info 0.32 >More info COL-0-Ctrl--shoot shoot Original data
391 overexpresser LBD38 in -N -0.67 >More info -0.26 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
392 HSP90 Reduced RNAi-C1 0.76 >More info 0.17 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
393 Laer pretreat JA Flg22 0h 0.67 >More info 0.26 >More info Laer pretreat water control leaf discs Original data GEO bulk
394 9 hr Hypoxia Total RNA 0.53 >More info 0.40 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
395 Laer pretreat GA+JA Flg22 0h 0.61 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
396 rosette leaves fdh 0.58 >More info 0.35 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
397 HSP90 Reduced Salk hsp90.1 -0.70 >More info -0.23 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
398 tt4 -0.57 >More info -0.36 >More info WT aerial region Original data GEO bulk
399 Differentiation 24h 0.53 >More info 0.39 >More info Differentiation 0h leaves Original data
400 ASL9-ox -0.64 >More info -0.28 >More info WT aerial parts of seedlings Original data GEO bulk
401 scl3 0.64 >More info 0.28 >More info Col-0 whole root Original data GEO bulk
402 Elevated CO2 leaf primordia 0.64 >More info 0.28 >More info Ambient CO2 leaf primordia leaf primordia Original data
403 Col-0 WT HL 3h 0.57 >More info 0.35 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
404 Ws 100mM NaCl 0.69 >More info 0.23 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
405 AZC 0.59 >More info 0.33 >More info noneHS Original data GEO bulk
406 Ws leaf 100mM NaCl 0.69 >More info 0.23 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
407 Mutant arf19-1 0.58 >More info 0.34 >More info Col Original data GEO bulk
408 root stele 40 mM NaCls 0.74 >More info 0.18 >More info root stele Original data GEO bulk
409 ACC 3 h 0.58 >More info 0.34 >More info Mock 3 h Original data Basic hormone treatment of seedlings
410 LTN008-2 aza-dc 0.50 >More info 0.42 >More info LTN012-2 Mock Original data
411 Salt Stress 24 h (root) 0.59 >More info 0.33 >More info Stress mock 24 h (root) Original data Stress treatments
412 Col whole leaf 5 dpi 0.41 >More info 0.51 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
413 ms1 unpollinated -0.52 >More info -0.39 >More info WT 8h-pollinated pistil Original data GEO bulk
414 shoots WT 0uM Fe 0.88 >More info 0.03 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
415 Col-0-3h IAA 0.65 >More info 0.26 >More info Col-0-0h IAA whole plant Original data GEO bulk
416 Heat shock 30%Inhibition 0.54 >More info 0.37 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
417 dicamba 0.54 >More info 0.37 >More info WT mock whole seedling Original data GEO bulk
418 RRE2 0.51 >More info 0.40 >More info Col C Original data GEO bulk
419 Col whole leaf 3dpi 0.51 >More info 0.40 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
420 short 8-degree- 0.57 >More info 0.34 >More info control short Original data GEO bulk
421 FOX line K16331 0.59 >More info 0.32 >More info empty vector control (T3) FOX lines Original data GEO bulk
422 smg5-2 0.61 >More info 0.30 >More info WT whole plant Original data GEO bulk
423 amiR-tor induced 3d 0.58 >More info 0.33 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
424 GSH 0.57 >More info 0.34 >More info control GSH treated seedlings Original data GEO bulk
425 sdg8-2 mutant 0.82 >More info 0.09 >More info wild type leaf Original data GEO bulk
426 glk1 glk2 GLK1-GR +DEX 24h -0.72 >More info -0.19 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
427 Tsu -Fe 24h Shoots 0.56 >More info 0.34 >More info Tsu +Fe 24h Shoots Original data GEO bulk
428 toc1-1-53hr 0.34 >More info 0.56 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
429 Laer pretreat JA Flg22 1h 0.55 >More info 0.35 >More info Laer pretreat water control leaf discs Original data GEO bulk
430 pho1 0.52 >More info 0.38 >More info Col2WT Original data GEO bulk
431 Mutant nph4-1_arf19-1 0.62 >More info 0.28 >More info Col Original data GEO bulk
432 35S:LOB-GR mock 0.67 >More info 0.23 >More info Col mock mock seedling Original data GEO bulk
433 WT NAA 2h -0.65 >More info -0.25 >More info WT 0h Leaf tissue Original data GEO bulk
434 OE WRKY63.3 high light 0.50 >More info 0.40 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
435 short 17-degree- 0.52 >More info 0.38 >More info control short Original data GEO bulk
436 red illumination +lincomycin 0.37 >More info 0.53 >More info red illumination -lincomycin Original data GEO bulk
437 ani1 T0.5 -0.40 >More info -0.50 >More info WT T0.5 root tissue Original data GEO bulk
438 L2.5 mutant -0.71 >More info -0.19 >More info Wt Original data GEO bulk
439 ein2-PsmES4326-24hpi -0.59 >More info -0.31 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
440 msh1 variegation Col-0 0.61 >More info 0.29 >More info WT Col-0 above ground part of plant Original data GEO bulk
441 ppi2 0.58 >More info 0.32 >More info WT whole plant Original data GEO bulk
442 scrm-D:mute 0.55 >More info 0.34 >More info Col-0 WT whole seedling Original data GEO bulk
443 plant (tga2-5-6) 4h OPDA 0.52 >More info 0.37 >More info plant (tga2-5-6) 4h control Original data GEO bulk
444 gun1gun5 drak pretreated -0.67 >More info -0.22 >More info WT drak pretreated Original data GEO bulk
445 ced1 -0.53 >More info -0.36 >More info WT PEG 6hr seedlings Original data GEO bulk
446 Nicotinamide-73hr 0.64 >More info 0.25 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
447 P.p 2.5hai 0.59 >More info 0.30 >More info At-Control roots Original data GEO bulk
448 Col-0 wt Hypoxic 0.60 >More info 0.29 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
449 treated group 0.55 >More info 0.33 >More info Control group Original data
450 Col leaf 100mM NaCl 0.56 >More info 0.32 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
451 Col leaf 100mM NaCl 0.56 >More info 0.32 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
452 Col 100mM NaCl 0.56 >More info 0.32 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
453 gun1-9 norflurazon 0.66 >More info 0.22 >More info gun1-9 control Original data GEO bulk
454 upf1 0.62 >More info 0.26 >More info WT whole plant Original data GEO bulk
455 sav3-2 shade 0.50 >More info 0.38 >More info Col-0 shade seedlings Original data GEO bulk
456 BI-1-3h IAA 0.66 >More info 0.22 >More info BI-1-0h IAA whole plant Original data GEO bulk
457 Mutant sav3-2 (SH) 0.50 >More info 0.38 >More info Col-0 (SH) Original data GEO bulk
458 sid2 -0.31 >More info -0.57 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
459 P.p 6hai 0.64 >More info 0.23 >More info At-Control roots Original data GEO bulk
460 Mutant axr3-1 0.51 >More info 0.36 >More info Col Original data GEO bulk
461 root - 01% oxygen - 48h 0.62 >More info 0.25 >More info root - 21% oxygen - 48h Original data GEO bulk
462 Stem tissue 5 days NAA 0.50 >More info 0.37 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
463 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.70 >More info 0.17 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
464 QK HS 0.52 >More info 0.35 >More info QK control heat shocked seedling Original data GEO bulk
465 root endodermis and quiescent center 40 mM NaCl 0.62 >More info 0.25 >More info root endodermis and quiescent center Original data GEO bulk
466 WT 24h cold 0.54 >More info 0.32 >More info WT warm 24h cold entire aerial part Original data GEO bulk
467 rao1-1 3h antimycin A -0.56 >More info -0.30 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
468 phr1 Root-Pi 0.53 >More info 0.33 >More info WT Root+Pi roots Original data GEO bulk
469 rosettes WT drought 0.53 >More info 0.33 >More info rosettes WT watered Original data GEO bulk
470 Col-0 SA 0.54 >More info 0.32 >More info Col-0 Original data GEO bulk
471 GO5; 0h switch to ambient CO2 concentrations; -0.59 >More info -0.27 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
472 arr-BA-sample -0.60 >More info -0.26 >More info Wt-BA-sample seedling Original data
473 seedling 3h after Gamma WT 0.50 >More info 0.36 >More info seedling day 1 unirradiated WT 3h Original data
474 Atwrky40 high light 0.63 >More info 0.23 >More info Col0 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
475 4C 24h(SOIL) 0.54 >More info 0.31 >More info 4C 0h(SOIL) Original data GEO bulk
476 Col upon hypoxia 6 hrs 0.54 >More info 0.31 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
477 hen1 -0.66 >More info -0.19 >More info Ler Original data GEO bulk
478 Whole root - S 48H 0.55 >More info 0.30 >More info Whole root - S 0H Original data GEO bulk
479 Whole root - low pH 6H 0.59 >More info 0.26 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
480 Differentiation 36h 0.50 >More info 0.35 >More info Differentiation 0h leaves Original data
481 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.68 >More info 0.16 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
482 eif3h non-polysome 0.52 >More info 0.32 >More info WT non-polysome Original data GEO bulk
483 seedlings +5AC 0.54 >More info 0.30 >More info control seedlings 10-day old whole seedling Original data GEO bulk
484 sng1 UV 0.53 >More info 0.31 >More info UV aerial region Original data GEO bulk
485 Nicotinamide-57hr 0.65 >More info 0.19 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
486 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
487 Nicotinamide-81hr 0.70 >More info 0.14 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
488 WT-drought 0.61 >More info 0.23 >More info WT-control leaf Original data
489 MG132 3 h 0.72 >More info 0.12 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
490 IRP1-OE-Ctrl--root 0.55 >More info 0.28 >More info COL-0-Ctrl--root root Original data
491 DMTU 0.60 >More info 0.23 >More info control Original data GEO bulk
492 penta Control 0.69 >More info 0.14 >More info Laer Control leaf discs Original data GEO bulk
493 sfr3 warm 0.57 >More info 0.26 >More info WT-warm aerial tissues Original data GEO bulk
494 SA Treated 0.75 >More info 0.08 >More info Water Original data GEO bulk
495 Dark 4 h pls UV-AB 5min 0.70 >More info 0.13 >More info Dark 4 h Original data Light treatments
496 ubc13A -Fe -0.60 >More info -0.23 >More info Col -Fe root Original data GEO bulk
497 msh1 stunt 0.63 >More info 0.19 >More info WT Col-0 above ground part of plant Original data GEO bulk
498 ex1 flu dark 8hours/30 minute light -0.54 >More info -0.28 >More info col dark 8hours/30 minute light Original data GEO bulk
499 20d after anthesis 0.53 >More info 0.29 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
500 ein3 eil1 0.67 >More info 0.15 >More info Col-0 mock Whole seedling Original data GEO bulk
501 tor mutant 0.52 >More info 0.30 >More info WT (Col) none seedlings Original data GEO bulk
502 CeO2 germinant -0.26 >More info -0.56 >More info Millipore Water germinant CeO2 seedling Original data
503 KAN1-GR 60min 0.58 >More info 0.24 >More info KAN1-GR 0min Original data GEO bulk
504 Brassinolide 0.5 h (det2) 0.64 >More info 0.17 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
505 sav3-2 light 0.51 >More info 0.30 >More info Col-0 light seedlings Original data GEO bulk
506 gpa1-4/agb1-2 clean-air 2d 0.61 >More info 0.20 >More info Col clean-air 2d clean-air Original data GEO bulk
507 Mutant sav3-2 (WL) 0.51 >More info 0.30 >More info Col-0 (WL) Original data GEO bulk
508 Tsu -Fe 48h Shoots 0.53 >More info 0.28 >More info Tsu +Fe 24h Shoots Original data GEO bulk
509 Whole root - S 72H 0.58 >More info 0.23 >More info Whole root - S 0H Original data GEO bulk
510 ckh1 CK0 0.62 >More info 0.18 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
511 bak1-3 untreated 0.54 >More info 0.26 >More info WT untreated untreated Original data GEO bulk
512 rosettes drought 0.50 >More info 0.30 >More info rosettes watered Original data GEO bulk
513 Whole root - S 24H 0.53 >More info 0.27 >More info Whole root - S 0H Original data GEO bulk
514 hni9 high nitrogen 0.52 >More info 0.28 >More info WT high nitrogen roots Original data GEO bulk
515 Mutant bri1 -0.63 >More info -0.17 >More info Ws-2 Original data Comparison of plant hormone related mutant
516 shoots bhlh100/101 100uM Fe 0.76 >More info 0.04 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
517 wt systemic wounding 0.51 >More info 0.29 >More info wt control leaves Original data GEO bulk
518 arr-dmso-sample 0.57 >More info 0.23 >More info Wt-dmso-sample seedling Original data
519 ani1 T16 -0.59 >More info -0.21 >More info WT T16 root tissue Original data GEO bulk
520 SA 24h 0.59 >More info 0.21 >More info EtOH 24h 24hr Original data GEO bulk
521 seedling 24h after HZE atm-1 0.55 >More info 0.24 >More info seedling day 2 unirradiated atm-1 24h Original data
522 penta Flg22 1h 0.56 >More info 0.23 >More info Laer Flg22 1h leaf discs Original data GEO bulk
523 Atss3 Light1 -0.25 >More info -0.54 >More info Atss3 Dark0.5 Original data GEO bulk
524 hyl1 0.29 >More info 0.50 >More info Col-0 Original data GEO bulk
525 2 hr Hypoxia IP RNA 0.69 >More info 0.10 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
526 mbd4 mutant thaliana 10-day-old seedling 0.54 >More info 0.24 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
527 root protophloem 40 mM NaCl 0.56 >More info 0.22 >More info root protophloem Original data GEO bulk
528 CBF3 100mM NaCl -0.53 >More info -0.25 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
529 AtMYB30-as 90-105 min Xanthomonas 0.54 >More info 0.24 >More info WT 90-105 min Xanthomonas Original data GEO bulk
530 gabaculin 0.76 >More info 0.02 >More info WT Col-0 seedling Original data GEO bulk
531 short 14-degree- 0.62 >More info 0.16 >More info control short Original data GEO bulk
532 24h light (+Lincomycin) 0.55 >More info 0.23 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
533 IAA 8h -0.66 >More info -0.11 >More info control 8h root Original data GEO bulk
534 ataf1-1 mutant Col-0 Un-inoculated -0.58 >More info -0.19 >More info WT Col-0 Un-inoculated Original data GEO bulk
535 arp6-10 24h at 27 ºC 0.60 >More info 0.17 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
536 col-5 hrpA 2h 0.50 >More info 0.27 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
537 protoplasted roots pH4.6 0.54 >More info 0.23 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
538 WT 24H Cold 0.50 >More info 0.27 >More info WT control Original data GEO bulk
539 sps1 -0.61 >More info -0.16 >More info WT seedling Original data GEO bulk
540 Elevated CO2 fully expanded leaf 0.54 >More info 0.22 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
541 bbx24 in Simulated Shade -0.53 >More info -0.23 >More info WT in simulated shade shade seedling Original data
542 Selenate (root) 0.58 >More info 0.18 >More info Ws (root) Original data GEO bulk
543 Root Selenate 0.58 >More info 0.18 >More info Root control 40 micromolar selenate Root Original data GEO bulk
544 seedling 24h after Gamma atm-1 0.60 >More info 0.16 >More info seedling day 2 unirradiated atm-1 24h Original data
545 piffq 3d WL 0.58 >More info 0.18 >More info WT 3d WL whole seedling Original data GEO bulk
546 +GA-60mins -0.51 >More info -0.25 >More info -60mins whole plant Original data GEO bulk
547 AtGATA2ox 0.62 >More info 0.14 >More info Col seedling Original data GEO bulk
548 Col-0-1h IAA 0.52 >More info 0.23 >More info Col-0-0h IAA whole plant Original data GEO bulk
549 shoot-10 μM DEX- 6 hr 0.60 >More info 0.15 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
550 piffq 2d WL 0.63 >More info 0.12 >More info WT 2d WL whole seedling Original data GEO bulk
551 10mM sucrose 0.51 >More info 0.24 >More info control Whole seedling Original data GEO bulk
552 Col laser microdissected 5 dpi 0.25 >More info 0.50 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
553 Elevated CO2 AMPLE N DAY 0.24 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
554 WT leaf-drought 0.50 >More info 0.24 >More info WT leaf-well watered Original data GEO bulk
555 piffq FR 1h 0.53 >More info 0.21 >More info WT FR 1h whole seedling Original data GEO bulk
556 ein2-1 +Pep2 2h -0.51 >More info -0.23 >More info WT +Pep2 2h Pep2 Original data GEO bulk
557 EBE-XVE +estradiol 0.54 >More info 0.20 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
558 Whole root - low pH 3H 0.67 >More info 0.07 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
559 C2 leaf-drought 0.54 >More info 0.20 >More info C2 leaf-well watered Original data GEO bulk
560 Col-0 24hpi A. brassicicola 0.72 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
561 HSP90 Reduced RNAi-A3 0.56 >More info 0.17 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
562 camta3-2 0.53 >More info 0.20 >More info WT Original data GEO bulk
563 IAA/inhibitor A Treated 0.53 >More info 0.20 >More info IAA Treated Original data GEO bulk
564 csn4-1 mutant 0.57 >More info 0.16 >More info WT dark Original data GEO bulk
565 sng1 0.55 >More info 0.18 >More info WT aerial region Original data GEO bulk
566 cpctry 0.53 >More info 0.20 >More info Col Original data GEO bulk
567 Col BTH 0.06 >More info 0.67 >More info Col rosettes Original data GEO bulk
568 ERF96OE 0.55 >More info 0.17 >More info WT leaf Original data
569 Inflorescence miR-NGA 0.16 >More info 0.56 >More info Inflorescence wt Original data GEO bulk
570 10min Reillumination IP RNA -0.51 >More info -0.21 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
571 F1 whole seedlings root 0.63 >More info 0.09 >More info Col whole seedlings root Seedlings Original data GEO bulk
572 IAA 12h -0.62 >More info -0.10 >More info control 12h root Original data GEO bulk
573 scm 0.54 >More info 0.18 >More info Col Original data GEO bulk
574 t-zeatin 0.5 h -0.22 >More info -0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
575 Nicotinamide-69hr 0.55 >More info 0.16 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
576 Col-0 +ABA LF 0.61 >More info 0.10 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
577 rosettes myoox drought 0.50 >More info 0.21 >More info rosettes myoox watered Original data GEO bulk
578 24h +Pi -0.60 >More info -0.11 >More info 24h -Pi root Original data GEO bulk
579 35S::HRE2 Hypoxic -0.61 >More info -0.10 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
580 rao2 water 3h -0.57 >More info -0.14 >More info WT water 3h 3h_water Original data GEO bulk
581 Fei-0-3h IAA 0.53 >More info 0.18 >More info Fei-0-0h IAA whole plant Original data GEO bulk
582 naxillin 3h 0.53 >More info 0.18 >More info before treatment naxillin root Original data GEO bulk
583 Laer GA 1h 0.52 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
584 ara1/2mut -0.04 >More info 0.75 >More info Col-3 Original data GEO bulk
585 Col-0 35S:MBS1 HL 3h -0.53 >More info -0.17 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
586 low CO2 + light 0.65 >More info 0.05 >More info normal CO2 + light Original data GEO bulk
587 HairpinZ 4 h (leaf) 0.73 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
588 grf1/grf2/grf3 0.51 >More info 0.19 >More info WS Original data GEO bulk
589 SIV pollen tube 0.50 >More info 0.20 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
590 ubc13A-es -0.61 >More info -0.09 >More info Col-es root Original data GEO bulk
591 prors1-2 leaves 0.18 >More info 0.52 >More info Col-0 leaves leaves Original data
592 root callus inducing medium 48 h -0.53 >More info -0.16 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
593 root callus inducing medium 24h -0.56 >More info -0.13 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
594 HSP90 Reduced Salk hsp90.3 -0.67 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
595 A. thaliana-A. halleri hybrid -0.56 >More info -0.12 >More info A. thaliana mature leaves before flowering Original data GEO bulk
596 miR393 flg22 2h 0.12 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
597 WT +elf18 2h 0.15 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
598 Col -Fe 0.58 >More info 0.10 >More info Col-es root Original data GEO bulk
599 CHS-silenced type -0.58 >More info -0.10 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
600 pvip1 pvip2 seedling 0.70 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
601 Laer pretreat GA Flg22 1h -0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
602 miR PSTDC3000 24h -0.53 >More info -0.14 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
603 pepr1-1 Pepr2-3 untreated 0.62 >More info 0.05 >More info WT untreated untreated Original data GEO bulk
604 seed germinating in countinuous light 24h SL -0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
605 IAA 1h -0.62 >More info -0.04 >More info control 1h root Original data GEO bulk
606 tetraploid -0.52 >More info -0.14 >More info diploid Original data GEO bulk
607 aux1 mutant roots air -0.51 >More info -0.15 >More info roots IAA Original data GEO bulk
608 cngc19 0.54 >More info 0.12 >More info Col-0 root Original data GEO bulk
609 Nicotinamide-93hr 0.57 >More info 0.09 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
610 Tsu-1 -Fe 48h 0.57 >More info 0.09 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
611 Tsu -Fe 48h Roots 0.57 >More info 0.09 >More info Tsu +Fe 24h Roots Original data GEO bulk
612 WT leaves - Fe 0.51 >More info 0.14 >More info WT leaves + Fe Leaves Original data GEO bulk
613 HSP90 Reduced Salk hsp90.2 -0.61 >More info -0.04 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
614 Dark 40min pls UV-AB 5min 0.62 >More info 0.03 >More info Dark 45 min Original data Light treatments
615 15m.KCl 0.56 >More info 0.09 >More info To. KCl 14 day old Roots Original data GEO bulk
616 mutant-line348 0.69 >More info -0.04 >More info WT-control whole plant Original data GEO bulk
617 root cap pGL2 3h BL -0.53 >More info -0.11 >More info root cap pGL2 0h BL brassinosteroid root Original data
618 gapcp1gapcp2 0.58 >More info 0.05 >More info WT Original data GEO bulk
619 overexpresser LBD37 in -N -0.50 >More info -0.13 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
620 M6PR transgenic 100mM NaCl -0.53 >More info -0.10 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
621 P35S:rGRF1 -0.53 >More info -0.10 >More info Col-0 Original data GEO bulk
622 Blue Light 4 h 0.67 >More info -0.04 >More info White Light 4 h Original data Light treatments
623 FHY3p dark+DEX -0.50 >More info -0.13 >More info FHY3p dark+mock Original data GEO bulk
624 Nicotinamide-89hr 0.56 >More info 0.06 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
625 WT-Dry 0.56 >More info 0.06 >More info WT-CK dehydration treatment 1h Original data
626 35S:LOB-GR DEX 0.50 >More info 0.12 >More info Col DEX dexamethasone seedling Original data GEO bulk
627 penta MeJA 1h 0.57 >More info 0.05 >More info Laer MeJA 1h leaf discs Original data GEO bulk
628 csn3-1 dark 0.57 >More info 0.05 >More info WT dark Original data GEO bulk
629 OsTOP6B ox 0.67 >More info -0.06 >More info WT Original data GEO bulk
630 bHLH122 ox -0.55 >More info -0.06 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
631 camta1 root drought 0.60 >More info 0.01 >More info Col-0 root drought root Original data GEO bulk
632 Kin SA -0.62 >More info 0.01 >More info Col-0 SA Original data GEO bulk
633 penta Pst DC3000 12hpi 0.50 >More info 0.11 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
634 gun5 norflurazon 0.51 >More info 0.10 >More info gun5 control Original data GEO bulk
635 OsTOP6A3 ox 0.65 >More info -0.04 >More info WT Original data GEO bulk
636 sid2-2 mock 0.68 >More info -0.08 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
637 Col PSTDC3000 24h 0.73 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
638 shoot-10 μM DEX- 12 hr 0.59 >More info 0.01 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
639 17 2h labelled 0.59 >More info 0.01 >More info 27 1h labelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
640 Blue Light 45 min -0.08 >More info -0.52 >More info White Light 45min Original data Light treatments
641 bri1-116 -0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
642 Ws seedlings 0.55 >More info 0.04 >More info ged1 seedlings Original data GEO bulk
643 ged1 seedlings -0.55 >More info -0.04 >More info Ws seedlings Original data GEO bulk
644 HSP90 Reduced RNAi-A1 0.54 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
645 mutant 0.52 >More info 0.06 >More info Anther anther Original data
646 phyABCDE Dark 0.61 >More info -0.04 >More info WT Dark Dark whole seedling Original data GEO bulk
647 Est SA -0.69 >More info 0.12 >More info Col-0 SA Original data GEO bulk
648 2hr continuous KNO3 PeR cell -0.57 >More info 0.00 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
649 FarRed Light 4 h 0.63 >More info -0.07 >More info White Light 4 h Original data Light treatments
650 170G5-16 0.56 >More info -0.00 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
651 vte2 leaves 120h LT 0.52 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
652 etiolated cop1 0.52 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
653 stn7-1 -0.56 >More info 0.01 >More info Col-0 rosette leaves Original data GEO bulk
654 nNOS-control -0.55 >More info -0.00 >More info WT-control leaf Original data
655 myb triple mutant 8h-pollinated ms1 0.56 >More info -0.01 >More info WT 8h-pollinated pistil Original data GEO bulk
656 IAA 24h -0.50 >More info -0.05 >More info control 24h root Original data GEO bulk
657 P. infestans 6 h (leaf) 0.70 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
658 Nicotinamide-77hr 0.58 >More info -0.03 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
659 46T-Dry -0.59 >More info 0.04 >More info WT-Dry dehydration treatment 1h Original data
660 Red/FR Light45min -0.15 >More info 0.70 >More info FarRed Light 45min Original data Light treatments
661 phyABDE Dark 0.66 >More info -0.12 >More info WT Dark Dark whole seedling Original data GEO bulk
662 46T-CK -0.50 >More info -0.04 >More info WT-CK none Original data
663 35S:miR396 -0.61 >More info 0.08 >More info WT 0 days-old seedlings. Original data GEO bulk
664 seuss-3 -0.51 >More info -0.02 >More info Col-0 Original data GEO bulk
665 nbp35-3/- -0.50 >More info -0.02 >More info WT whole seedling Original data GEO bulk
666 seu-3 ant-1 -0.55 >More info 0.03 >More info Col-0 Original data GEO bulk
667 Seeds stage3 with siliques -0.50 >More info -0.02 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
668 IAA 4h -0.51 >More info -0.01 >More info control 4h root Original data GEO bulk
669 WT roots - Fe 0.58 >More info -0.06 >More info WT roots + Fe Roots Original data GEO bulk
670 toc1-1-73hr -0.01 >More info 0.53 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
671 shoot-10 μM DEX- 24hr 0.69 >More info -0.17 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
672 RRE1 0.51 >More info -0.00 >More info Col C Original data GEO bulk
673 Ba1 UV 0.52 >More info -0.01 >More info Ba1 mock UV seedling Original data
674 ein2 0.53 >More info -0.03 >More info Col-0 Leaves Original data GEO bulk
675 root longitudinal zone-4 low sulfur -0.60 >More info 0.10 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
676 root BA 12h 0.52 >More info -0.03 >More info root control 12h boron (5mM) root Original data GEO bulk
677 pif1-2 dark -0.50 >More info 0.01 >More info Wt dark Original data GEO bulk
678 Mutant pif1-2 (Dark etiol) -0.50 >More info 0.01 >More info Col-0 (Dark etiol) Original data GEO bulk
679 slr-1 0h NAA -0.61 >More info 0.12 >More info Col-0 0h NAA Original data GEO bulk
680 Total RNA 35S:AtCSP1-FH1 cold 0.53 >More info -0.05 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
681 whole roots 140 mM NaCl 30 minutes 0.51 >More info -0.03 >More info whole roots standard Original data GEO bulk
682 upb1-1 meristematic zone -0.51 >More info 0.03 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
683 GST-overexpression seedlings control 0.59 >More info -0.11 >More info WT seedlings control Seedlings Original data
684 siliques -0.50 >More info 0.02 >More info Control for tissue data Original data GEO bulk
685 35S::HRE1 Aerobic -0.50 >More info 0.04 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
686 AFB1 0h 0.52 >More info -0.06 >More info WT 0h Leaf tissue Original data GEO bulk
687 seedling -S Exp 0.62 >More info -0.16 >More info seedling FN Exp seedling Original data
688 Nicotinamide-61hr 0.51 >More info -0.06 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
689 DUO1 induced 6h -0.53 >More info 0.09 >More info 6hr-not-induced whole plant Original data GEO bulk
690 sid2-2 safener 0.57 >More info -0.13 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
691 sid2-avrB-6h 0.67 >More info -0.26 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
692 root longitudinal zone-3 low sulfur -0.52 >More info 0.12 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
693 fls1-3 -0.15 >More info 0.55 >More info Col-0 Rosette leaves Original data
694 chl1-12 10mM NH4NO3 0.51 >More info -0.14 >More info col 10mM NH4NO3 Root Original data
695 GO5; harvested 8h continiously maintained in high
CO2;		 0.54 >More info -0.18 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
696 17 2h total 0.51 >More info -0.15 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
697 essp3/brm5 mutant 0.61 >More info -0.25 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
698 E.orontii Infection 3 day -0.18 >More info 0.53 >More info Uninfection 3 day Original data Elicitor treatments
699 21h-DC3000 avrRpm1 -0.51 >More info 0.16 >More info 21h-DC3000 leaves Original data GEO bulk
700 IAA 0h 0.51 >More info -0.16 >More info control 0h root Original data GEO bulk
701 rao1-2 0.52 >More info -0.17 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
702 CCA1-ox 6am non-polysomal -0.16 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
703 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
704 HSP90 Reduced hsp90.2 -0.51 >More info 0.17 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
705 SOS1 100mM NaCl -0.56 >More info 0.23 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
706 PNO8 12 h 0.36 >More info -0.68 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
707 ACN1-2 Sucrose -0.64 >More info 0.32 >More info Col-7 Sucrose Original data GEO bulk
708 TaFLS overexpression line (OE1) -0.50 >More info 0.18 >More info Col-0 Rosette leaves Original data
709 IAA7mII over-expressor IAA Treated -0.38 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
710 Mutant lwd1_lwd2 -0.29 >More info 0.52 >More info Wildtype for phy mutants Original data GEO bulk
711 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.29 >More info 0.52 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
712 2hr continuous KNO3 PrR cell 0.50 >More info -0.29 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
713 atmyc2 Seedling BL -0.51 >More info 0.39 >More info WT Seedling BL Original data GEO bulk
714 ACN1-2 -0.51 >More info 0.40 >More info col-7 Original data GEO bulk
715 2hr transitory KNO3 PrR cell 0.53 >More info -0.62 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
716 0h hml 0.55 >More info -0.47 >More info 0h wt Original data