4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on MYB29 OE
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "MYB29 OE"
Download transcriptome of top 30
Score
Experiment
Correlation from
MYB29 OE
Correlation to
MYB29 OE
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
MYB29 OE
1.00
>More info
1.00
>More info
WT for MYB29/76
Original data
GEO bulk
2
MYB76 OE
0.95
>More info
0.93
>More info
WT for MYB29/76
Original data
GEO bulk
3
35S:MYB28 like miR
-0.34
>More info
-0.84
>More info
WT for miR
Original data
GEO bulk
4
seedlings by volatiles from leafminer damaged
Lima bean 48h
0.63
>More info
0.53
>More info
seedlings by volatiles from healthy Lima bean 48h
leaves
Original data
GEO bulk
5
Laer pretreat JA Flg22 0h
0.50
>More info
0.62
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
6
35S::PI ap3-3 35S::AP-GR +DEX
0.47
>More info
0.64
>More info
0hr DEX
Original data
GEO bulk
7
Leaf GLU1-KO
0.58
>More info
0.52
>More info
Leaf Col(0)
rosette leaves
Original data
GEO bulk
8
Col-7 Sucrose
0.52
>More info
0.57
>More info
col-7
Original data
GEO bulk
9
Laer pretreat GA Flg22 1h
0.38
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
10
35S:ATR1 like miR
-0.32
>More info
-0.74
>More info
WT for miR
Original data
GEO bulk
11
ARR22-ox
0.54
>More info
0.48
>More info
Col-0
Original data
Cytokinin treatment of seedlings
12
cat2-2; 8h switch to ambient CO2 concentrations;
0.34
>More info
0.65
>More info
WT; 8h switch to ambient CO2 concentrations;
2 whole rosettes
Original data
13
seedling 24h after Gamma WT
0.41
>More info
0.58
>More info
seedling day 2 unirradiated WT
24h
Original data
14
essp4/sdg8-5 mutant
0.64
>More info
0.34
>More info
wild type
leaf
Original data
GEO bulk
15
4h decapitation
0.45
>More info
0.53
>More info
axillary-buds-before-decapitation
axillary shoots
Original data
GEO bulk
16
NJ15
0.30
>More info
0.68
>More info
mock
sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates
Seedlings
Original data
17
col 24h4c set4
0.45
>More info
0.53
>More info
col 0h4c
cold-treated moved to a 4C chamber for 24h
whole seedlings
Original data
18
sdg8-2 mutant
0.61
>More info
0.36
>More info
wild type
leaf
Original data
GEO bulk
19
Differentiation 36h
0.44
>More info
0.53
>More info
Differentiation 0h
leaves
Original data
20
eif3h polysome
0.44
>More info
0.52
>More info
WT polysome
Original data
GEO bulk
21
Heat shock optimum
0.30
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
22
Botrytis cinerea 48h
0.38
>More info
0.56
>More info
control 48h
Original data
GEO bulk
23
FarRed Light 45min
-0.30
>More info
-0.64
>More info
White Light 45min
Original data
Light treatments
24
Norflurazon
0.44
>More info
0.50
>More info
Col-0
Original data
GEO bulk
25
Whole root - S 3H
0.37
>More info
0.57
>More info
Whole root - S 0H
Original data
GEO bulk
26
Norflurazon
0.44
>More info
0.50
>More info
WT-Contrl
a herbicide (Norflurazon)
seedling
Original data
GEO bulk
27
vtc2 mature somatic embryo
-0.39
>More info
-0.54
>More info
WT mature somatic embryo
mature somatic embryo
Original data
GEO bulk
28
sicy-192 cotyledons
0.37
>More info
0.56
>More info
WT cotyledons
cotyledons
Original data
29
Col0-PsmES4326-24hpi
0.32
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
30
WT (Col) glucose
0.38
>More info
0.54
>More info
WT (Col)
glucose
seedlings
Original data
GEO bulk
31
shoot hypoxia p35S
0.29
>More info
0.62
>More info
shoot hypoxia total
Original data
GEO bulk
32
Hydrogen Peroxide 500 uM
0.52
>More info
0.38
>More info
Control RB and PER
Hydrogen Peroxide
Original data
33
Heat no recovery
0.39
>More info
0.51
>More info
Mock no recovery
seedling
Original data
GEO bulk
34
xyl-grown cell culture- 1h 1mM Suc
0.17
>More info
0.73
>More info
xyl-grown cell culture- 1h 1mM Xyl
cell culture
Original data
35
dorn1-1 Root 100 mM ATP 30 min
0.52
>More info
0.37
>More info
Col-0 Root 100 mM ATP 30 min
Roots of 5 day-old seedlings
Original data
36
Col leaf scrape 5 dpi
0.50
>More info
0.39
>More info
Col whole leaf 5d UI
leaf section scrapes
Original data
GEO bulk
37
Glyphosate EC50
0.51
>More info
0.38
>More info
Carrier (Glyphosate)
Original data
GEO bulk
38
rosette Dark Wounded
0.38
>More info
0.51
>More info
rosette Dark Control
Original data
GEO bulk
39
Col-0 DCA 6d
-0.39
>More info
-0.50
>More info
Col-0 MOCK 6d
Original data
GEO bulk
40
gun1gun5 far-red pretreated
-0.51
>More info
-0.37
>More info
WT far-red pretreated
Original data
GEO bulk
41
apk1 apk2
0.57
>More info
0.31
>More info
Col0-control
whole rosette
Original data
GEO bulk
42
phyB mutant 22C 10hrs
0.30
>More info
0.58
>More info
L22-10hrs
whole plant excluding roots
Original data
GEO bulk
43
roottip hypoxia pSHR
0.28
>More info
0.59
>More info
roottip hypoxia total
hypoxia
roottip
Original data
GEO bulk
44
B.cinerea 18 h infection
0.56
>More info
0.30
>More info
Mock 18 h
Original data
Botrytis cinerea
infection
45
Botrytis cinerea 18h
0.56
>More info
0.30
>More info
control 18h
Original data
GEO bulk
46
ANAC102 over-expressor
0.28
>More info
0.58
>More info
C24
Original data
GEO bulk
47
amiRAP aerobic
0.33
>More info
0.52
>More info
WT aerobic
aerobic
Original data
GEO bulk
48
shoot control p35S
0.28
>More info
0.56
>More info
shoot control total
Original data
GEO bulk
49
Whole root - S 72H
0.34
>More info
0.50
>More info
Whole root - S 0H
Original data
GEO bulk
50
det2 light-dark
-0.52
>More info
-0.31
>More info
det2 light
light-dark
Original data
GEO bulk
51
KAN1-GR 60min
0.53
>More info
0.29
>More info
KAN1-GR 0min
Original data
GEO bulk
52
WT cold
0.31
>More info
0.51
>More info
WT control
All aerial tissue
Original data
GEO bulk
53
3x(p)
-0.25
>More info
-0.57
>More info
2x
two week old seedlings
Original data
54
Inflorescence miR-NGA
0.30
>More info
0.51
>More info
Inflorescence wt
Original data
GEO bulk
55
Red/FR Light45min
0.13
>More info
0.67
>More info
FarRed Light 45min
Original data
Light treatments
56
penta Alternaria 3dpi
0.50
>More info
0.29
>More info
Laer Alternaria 3dpi
leaf discs
Original data
GEO bulk
57
pip3 At2g19270 TDNA 9
-0.20
>More info
-0.59
>More info
Col-0
whole plant
Original data
GEO bulk
58
Naphthyl- phthalamic acid 3 h
0.50
>More info
0.28
>More info
Mock 3 h
Original data
Effect of auxin inhibitors on seedlings
59
SOS1 100mM NaCl
-0.56
>More info
-0.22
>More info
Ws 100mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
60
mutant acs6E (single mutant)
0.26
>More info
0.52
>More info
col control (single mutant)
Original data
GEO bulk
61
root epidermis and lateral root cap -S
0.17
>More info
0.61
>More info
root epidermis and lateral root cap pH5.7
Original data
GEO bulk
62
INA
-0.27
>More info
-0.51
>More info
CK
INA
seedling
Original data
63
root control pSCR
0.52
>More info
0.25
>More info
root control total
control
root
Original data
GEO bulk
64
shoot-10 μM DEX- 3 hr
0.51
>More info
0.25
>More info
shoot-10 μM DEX- 0 hr
SHR induction by DEX
whole shoot
Original data
65
Laer pretreat GA+JA Flg22 1h
0.50
>More info
0.26
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
66
shoot hypoxia pRBCS
0.26
>More info
0.50
>More info
shoot hypoxia total
Original data
GEO bulk
67
arp6-10 12 ºC
0.25
>More info
0.51
>More info
Col-0 12 ºC
whole seedlings
Original data
GEO bulk
68
SHR-GR Time 12H Dex
0.14
>More info
0.61
>More info
SHR-GR Time 0H Dex
Dex media for 12 hours
Original data
GEO bulk
69
atmyc2 Seedling BL+ABA
0.23
>More info
0.52
>More info
WT Seedling BL+ABA
Original data
GEO bulk
70
Imbibed 3 h (seed)
0.52
>More info
0.22
>More info
Dry seed
Original data
Time course of early seed germination
71
atm3
-0.17
>More info
-0.57
>More info
Col0
whole plant
Original data
GEO bulk
72
low CO2 + dark
-0.22
>More info
-0.52
>More info
normal CO2 + light
Original data
GEO bulk
73
bri1-116
-0.00
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
74
low CO2 + light
-0.16
>More info
-0.56
>More info
normal CO2 + light
Original data
GEO bulk
75
short 17-degree-
0.20
>More info
0.51
>More info
control short
Original data
GEO bulk
76
oas-a1.1 root
0.21
>More info
0.50
>More info
WT-Untreated
Root
Original data
GEO bulk
77
BAM8-Lig Ox untreated
0.20
>More info
0.51
>More info
WT untreated
none
shoot
Original data
78
Col-0 (t-zeatin 3 h)
0.12
>More info
0.58
>More info
Col-0
Original data
Cytokinin treatment of seedlings
79
short 12-degree-
0.18
>More info
0.52
>More info
control short
Original data
GEO bulk
80
long 17-degree-
0.12
>More info
0.58
>More info
control long
Original data
GEO bulk
81
ptpks2
0.09
>More info
0.59
>More info
Col-WT
leaves
Original data
GEO bulk
82
dor drought
0.14
>More info
0.53
>More info
WT drought
Original data
GEO bulk
83
S5
0.11
>More info
0.56
>More info
WT
Original data
GEO bulk
84
Col BTH
0.00
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
85
IAA7mII over-expressor IAA Treated
-0.02
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
86
ara1/2mut
0.08
>More info
0.58
>More info
Col-3
Original data
GEO bulk
87
PNO8 3 h
0.51
>More info
0.14
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
88
aerial organ callus inducing medium 96 h
0.50
>More info
0.15
>More info
aerial organ callus inducing medium 0 h
96 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
89
aphid infested
-0.05
>More info
-0.60
>More info
control
aphid infested
Leaves
Original data
GEO bulk
90
aphid infested
-0.05
>More info
-0.60
>More info
CTR
Original data
GEO bulk
91
Propiconazole 3 h
0.55
>More info
0.09
>More info
Mock 3 h
Original data
Effect of GA inhibitors on seedlings
92
red illumination +lincomycin
0.07
>More info
0.57
>More info
red illumination -lincomycin
Original data
GEO bulk
93
root longitudinal zone-1 low sulfur
0.05
>More info
0.58
>More info
root longitudinal zone-1 pH 5.7
Original data
GEO bulk
94
PNO8 12 h
-0.01
>More info
-0.60
>More info
Mock 12 h
Original data
Effect of other inhibitors on seedlings
95
siliques AtHb1 control
0.09
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
96
Ws 100mM NaCl
0.52
>More info
0.08
>More info
Ws 0mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
97
Ws leaf 100mM NaCl
0.52
>More info
0.08
>More info
Ws leaf 0mM NaCl
leaf
Original data
GEO bulk
98
Brassinolide 1 h (det2)
-0.10
>More info
-0.50
>More info
Mock 1 h (det2)
Original data
Basic hormone treatment of seedlings
99
30m light
0.06
>More info
0.53
>More info
before light
whole seedlings
Original data
GEO bulk
100
seed germinating in countinuous light 24h SL
-0.09
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
101
Leafminer damaged seedlings
0.02
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
102
15m light
0.05
>More info
0.52
>More info
before light
whole seedlings
Original data
GEO bulk
103
ABA SA 24h
0.07
>More info
-0.64
>More info
EtOH 24h
24hr
Original data
GEO bulk
104
sfr6 drought
-0.03
>More info
0.60
>More info
WT drought
All aerial tissue
Original data
GEO bulk
105
t-zeatin 3 h
0.03
>More info
0.53
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
106
Mutant iaa5_6_19(IAA)
0.06
>More info
0.50
>More info
Col (IAA)
Original data
GEO bulk
107
ABA JA 24h
0.06
>More info
-0.62
>More info
EtOH 24h
24hr
Original data
GEO bulk
108
Col ozone 2d
0.56
>More info
-0.01
>More info
Col clean-air 2d
ozone
Original data
GEO bulk
109
root stele -S
-0.00
>More info
0.53
>More info
root stele pH5.7
Original data
GEO bulk
110
myb3 myb3r4d
0.00
>More info
-0.52
>More info
Wild type Col0-9d
whole seedlings
Original data
GEO bulk
111
SCR-GR Time 1H Dex
0.15
>More info
-0.65
>More info
SCR-GR Time 0H Dex
Dex media for 1 hour
Original data
GEO bulk
112
rdr6-15
-0.10
>More info
0.57
>More info
Col-0
plant inflorescence
Original data
113
Genotoxic Stress 3 h (shoot)
-0.11
>More info
0.51
>More info
Stress mock 3 h (shoot)
Original data
Stress treatments
114
gpa1-4/agb1-2 ozone 2d
-0.14
>More info
0.54
>More info
Col ozone 2d
ozone
Original data
GEO bulk
115
Shoot apex inflorescence (after bolting)
-0.27
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
116
21h-DC3000 avrRpm1
-0.23
>More info
0.58
>More info
21h-DC3000
leaves
Original data
GEO bulk
117
CCA1-ox 6am non-polysomal
-0.17
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data