4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on aerial organ callus inducing medium 96 h
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Score Experiment Correlation from
aerial organ callus inducing medium 96 h		 Correlation to
aerial organ callus inducing medium 96 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 aerial organ callus inducing medium 96 h 1.00 >More info 1.00 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
2 aerial organ callus inducing medium 48 h 0.91 >More info 0.92 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
3 aerial organ callus inducing medium 24h 0.84 >More info 0.88 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
4 aerial organ callus inducing medium 12 h 0.81 >More info 0.85 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
5 NAA -AA 0.79 >More info 0.75 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
6 WT Seedling BL -0.75 >More info -0.78 >More info WT Seedling Dark Original data GEO bulk
7 WT Red light 18h -0.76 >More info -0.75 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
8 Col-0 low oxygen 0.76 >More info 0.70 >More info Col-0 Original data GEO bulk
9 col-5 hrpA 12h 0.69 >More info 0.75 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
10 WT light -0.74 >More info -0.68 >More info WT dark Original data GEO bulk
11 Col-0 C2H4 24h 0.72 >More info 0.69 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
12 Light 4h steady-state -0.71 >More info -0.69 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
13 phr1 phl1 Root-Pi 0.72 >More info 0.68 >More info WT Shoot+Pi roots Original data GEO bulk
14 Light 4h polysome-bound -0.71 >More info -0.68 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
15 Shoot submergence 24h 0.71 >More info 0.68 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 Dark 4 h pls RedLight 1min -0.61 >More info -0.77 >More info Dark 4 h Original data Light treatments
17 E.coli 0157 H7 7h 0.66 >More info 0.72 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
18 col-5 DC3000 12h 0.66 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
19 Laer pretreat GA Flg22 1h 0.65 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
20 phr1 Shoot-Pi -0.70 >More info -0.66 >More info WT Root-Pi shoots Original data GEO bulk
21 erf104-ko Flg22 4h 0.69 >More info 0.67 >More info erf104-ko H2O 4h Original data GEO bulk
22 Laer treat paclobutrazol (PAC) 0.72 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
23 phyB Dark -0.69 >More info -0.66 >More info WT(Ler) Dark Original data GEO bulk
24 ataf1-1 mutant Col-0 Bgh inoculated 0.66 >More info 0.68 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
25 E.coli TUV86 2 fliC 7h 0.69 >More info 0.65 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
26 tumour 0.64 >More info 0.70 >More info non-tumor tumour Original data GEO bulk
27 Shoot dark control 7h 0.66 >More info 0.67 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
28 Botrytis cinerea 48h 0.68 >More info 0.65 >More info control 48h Original data GEO bulk
29 phyAphyB Dark 0.67 >More info 0.66 >More info phyB Dark Original data GEO bulk
30 IMI 4mM 0.68 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
31 Differentiation 12h 0.67 >More info 0.65 >More info Differentiation 0h leaves Original data
32 hrpA 7h 0.68 >More info 0.64 >More info Mock 7h hrpA Original data GEO bulk
33 cpr5npr1svi1 0.59 >More info 0.73 >More info WT(COL) Original data GEO bulk
34 hrcC 0.66 >More info 0.65 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
35 Dark 4 h pls UV-A 5 min -0.57 >More info -0.74 >More info Dark 4 h Original data Light treatments
36 mkk1/mkk2 24h BTH rep 0.66 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
37 Col-0 9 hpi A. brassicicola 0.64 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
38 mkk1/mkk2 control rep 0.66 >More info 0.64 >More info Col-0 Time 0 rep Original data GEO bulk
39 C58 35dpi 0.65 >More info 0.65 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
40 ASL9-ox -0.63 >More info -0.67 >More info WT aerial parts of seedlings Original data GEO bulk
41 Col0-PsmES4326-24hpi 0.69 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
42 Seedling KUA1-IOX est 0.55 >More info 0.74 >More info Seedling KUA1-IOX mock Original data
43 cpr5npr1 0.60 >More info 0.69 >More info WT(COL) Original data GEO bulk
44 CabpBVR2 0.68 >More info 0.61 >More info WT Original data GEO bulk
45 Flagellin 4 h (leaf) 0.65 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
46 35SpBVR3 0.63 >More info 0.66 >More info WT Original data GEO bulk
47 Col whole leaf 5dpi 0.65 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
48 Cor 10h 0.67 >More info 0.62 >More info Mock 10h Cor Original data GEO bulk
49 HopZ1a treated 0.64 >More info 0.65 >More info col Original data GEO bulk
50 DC3000 7h 0.63 >More info 0.65 >More info Mock 7h DC3000 Original data GEO bulk
51 Col-0 +lincomycin 0.63 >More info 0.65 >More info Col-0 -lincomycin Original data GEO bulk
52 cpr5scv1 0.65 >More info 0.63 >More info WT(COL) Original data GEO bulk
53 Col whole leaf 7dpi 0.65 >More info 0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
54 mpk6-ko Flg22 4h 0.60 >More info 0.68 >More info mpk6-ko H2O 4h Original data GEO bulk
55 IAA 3 h 0.62 >More info 0.66 >More info Mock 3 h Original data Basic hormone treatment of seedlings
56 ice1 24H Cold 0.66 >More info 0.61 >More info WT 24H Cold Original data GEO bulk
57 Shoot dark control 24h 0.67 >More info 0.60 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
58 Dark 3day ivd 0.71 >More info 0.56 >More info 0h ivd Original data
59 35S:RPS4 eds1-2 24h -0.66 >More info -0.61 >More info 35S:RPS4 24h leaves Original data
60 hrpA fliC 7h 0.66 >More info 0.61 >More info Mock 7h hrpA fliC Original data GEO bulk
61 efr-1 +elf18 10h -0.61 >More info -0.66 >More info WT +elf18 10h elf18 Original data GEO bulk
62 AvrRpt2 Col-0 6hpi 0.67 >More info 0.59 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
63 cop1 Seedling Dark -0.65 >More info -0.61 >More info WT Seedling Dark Original data GEO bulk
64 GST NPP1 4 h (leaf) 0.66 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
65 Sulfometuron EC50 0.70 >More info 0.56 >More info Carrier Original data GEO bulk
66 Osmotic Stress 24 h (shoot) 0.68 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
67 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.66 >More info -0.59 >More info 2d dark-grown WT seedling Original data GEO bulk
68 35S::ERF104 Flg22 4h 0.60 >More info 0.65 >More info 35S::ERF104 H2O 4h Original data GEO bulk
69 flu over-tAPX 0.63 >More info 0.62 >More info WT Col Original data GEO bulk
70 Col-0 under 4 days salt 0.67 >More info 0.57 >More info Col-0 under control 4 days salt treatment rosette Original data
71 WT(Ler) Rc50 -0.65 >More info -0.59 >More info WT(Ler) Dark Original data GEO bulk
72 Phaseolicola 2 h (leaf) 0.57 >More info 0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
73 WT Rc50 -0.66 >More info -0.57 >More info WT Dark red light whole seedling Original data GEO bulk
74 WT Col-0 Bgh inoculated 0.56 >More info 0.67 >More info WT Col-0 Un-inoculated Original data GEO bulk
75 WT(Ler) Rc15 -0.59 >More info -0.63 >More info WT(Ler) Dark Original data GEO bulk
76 gh3.5-1D 48 hpi 0.59 >More info 0.63 >More info Col-0 uninoculated Original data GEO bulk
77 HopZ1a treated ulp1c ulp1d 0.61 >More info 0.61 >More info col Original data GEO bulk
78 RPL18 TuMV inoculated total RNA 0.65 >More info 0.57 >More info mock inoculated total RNA PO Original data GEO bulk
79 ice1 control 0.68 >More info 0.53 >More info WT control Original data GEO bulk
80 Shoot -Cs 0.54 >More info 0.67 >More info Control-shoot Original data GEO bulk
81 pvip1 pvip2 0.60 >More info 0.61 >More info Col-0 whole rosettes Original data GEO bulk
82 C24-3h IAA 0.64 >More info 0.57 >More info C24-0h IAA whole plant Original data GEO bulk
83 B.cinerea 18 h infection 0.63 >More info 0.58 >More info Mock 18 h Original data Botrytis cinerea infection
84 Botrytis cinerea 18h 0.63 >More info 0.58 >More info control 18h Original data GEO bulk
85 Aerobic prt6 0.48 >More info 0.73 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
86 Leafminer locally damaged thaliana seedlings 0.64 >More info 0.56 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
87 Leafminer damaged seedlings 0.64 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
88 Col BTH 0.53 >More info 0.67 >More info Col rosettes Original data GEO bulk
89 Differentiation 36h 0.67 >More info 0.53 >More info Differentiation 0h leaves Original data
90 Col-0 norflurazon 0.67 >More info 0.53 >More info Col-0 control Original data GEO bulk
91 Laer pretreat GA+JA Flg22 2h 0.66 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
92 Differentiation 24h 0.66 >More info 0.54 >More info Differentiation 0h leaves Original data
93 ceh1 mutant 0.61 >More info 0.59 >More info Parent line Original data
94 tt4 0.59 >More info 0.61 >More info Col-0 aerial part Original data
95 edr1 36 h powdery mildew 0.63 >More info 0.57 >More info Col-0 36 h powdery mildew Original data GEO bulk
96 Dark 2day wt 0.69 >More info 0.51 >More info 0h wt Original data
97 SLWF infested 0.61 >More info 0.59 >More info SLWF uninfested rosette tissue Original data GEO bulk
98 ice1 6H Cold 0.64 >More info 0.55 >More info WT 6H Cold Original data GEO bulk
99 pnp1-1 3h +P 0.65 >More info 0.54 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
100 Leaf GLU1-KO 0.66 >More info 0.53 >More info Leaf Col(0) rosette leaves Original data GEO bulk
101 DC3000 2 h (leaf) 0.55 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
102 Dark 3day wt 0.67 >More info 0.52 >More info 0h wt Original data
103 Col-0 48 hpi 0.59 >More info 0.60 >More info Col-0 uninoculated Original data GEO bulk
104 petiole in FRD 0.63 >More info 0.55 >More info petiole in WL petioles Original data GEO bulk
105 Dark 6h ivd 0.62 >More info 0.56 >More info 0h ivd Original data
106 Laer Flg22 2h 0.67 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
107 seedlings protease IV 0.61 >More info 0.57 >More info seedlings nontreated control whole seedling Original data
108 IAA 24h 0.49 >More info 0.69 >More info control 24h root Original data GEO bulk
109 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.64 >More info -0.53 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
110 clf-28 swn-7 0.69 >More info 0.48 >More info Col whole plant Original data GEO bulk
111 D2O 0.52 >More info 0.65 >More info H2O seedling Original data GEO bulk
112 Differentiation 48h 0.67 >More info 0.50 >More info Differentiation 0h leaves Original data
113 Aerobic e1 ate2 0.44 >More info 0.73 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
114 ice1 3H Cold 0.66 >More info 0.50 >More info WT 3H Cold Original data GEO bulk
115 sicy-192 cotyledons 0.53 >More info 0.63 >More info WT cotyledons cotyledons Original data
116 Dark 3day hml 0.66 >More info 0.50 >More info 0h hml Original data
117 35S:RPS4 eds1-2 8h -0.62 >More info -0.54 >More info 35S:RPS4 8h leaves Original data
118 pmr5 pmr6 0.59 >More info 0.57 >More info Col-0 Original data GEO bulk
119 Pto inoculated 0.59 >More info 0.57 >More info col Original data GEO bulk
120 vte2-1 3d vernalization 0.59 >More info 0.57 >More info WT 3d vernalization Original data GEO bulk
121 Cold Stress 24 h (shoot) 0.57 >More info 0.59 >More info Stress mock 24 h (shoot) Original data Stress treatments
122 flu 0.55 >More info 0.60 >More info WT Col Original data GEO bulk
123 Norflurazon 0.57 >More info 0.58 >More info Col-0 Original data GEO bulk
124 Col-0-3h IAA 0.64 >More info 0.51 >More info Col-0-0h IAA whole plant Original data GEO bulk
125 Bur-0-3h IAA 0.66 >More info 0.49 >More info Bur-0h IAA whole plant Original data GEO bulk
126 Dark 2day hml 0.67 >More info 0.48 >More info 0h hml Original data
127 Norflurazon 0.57 >More info 0.58 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
128 PAHs stress 0.62 >More info 0.53 >More info exp control phenanthrene whole plants Original data GEO bulk
129 atmyc2 cop1 Seedling Dark -0.61 >More info -0.53 >More info WT Seedling Dark Original data GEO bulk
130 intact root auxin 0.53 >More info 0.61 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
131 etiolated cop1BBX22-GFPox -0.60 >More info -0.54 >More info etiolated Col-0 whole seedlings Original data GEO bulk
132 pif4pif5 mut dark -0.53 >More info -0.61 >More info WT dark Original data GEO bulk
133 Mutant iaa17-6 (IAA) 0.58 >More info 0.56 >More info Col (IAA) Original data GEO bulk
134 edr1 18 h powdery mildew 0.59 >More info 0.55 >More info Col-0 18 h powdery mildew Original data GEO bulk
135 Stem tissue 5 days NAA 0.47 >More info 0.67 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
136 eto1-4 +393 -0.45 >More info -0.68 >More info eto1-4 whole seedling Original data GEO bulk
137 sta1 0.54 >More info 0.59 >More info WT Original data GEO bulk
138 RPL18 TuMV inoculated polysomal RNA 0.63 >More info 0.50 >More info mock inoculated polysomal RNA PO Original data GEO bulk
139 msh1 albino 0.52 >More info 0.61 >More info WT aerial part Original data GEO bulk
140 pad4-PsmES4326-24hpi -0.64 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
141 WT hypoxia 0.57 >More info 0.56 >More info WT normoxia whole rosette Original data
142 dor drought 0.61 >More info 0.52 >More info WT drought Original data GEO bulk
143 Rsch 3d 0.53 >More info 0.60 >More info Rsch CA Leaves Original data
144 rosette leaves fdh 0.47 >More info 0.66 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
145 Imidazolinone EC50 0.55 >More info 0.57 >More info Carrier (Imidazolinone) Original data GEO bulk
146 eif3h 0.64 >More info 0.48 >More info WT Original data GEO bulk
147 Mutant arf2-6 -0.67 >More info -0.45 >More info Col Original data GEO bulk
148 S58-2 0.56 >More info 0.56 >More info wt Original data GEO bulk
149 scrm-D 0.59 >More info 0.53 >More info Col-0 WT whole seedling Original data GEO bulk
150 cngc1-3 0.61 >More info 0.51 >More info Col-0 root Original data GEO bulk
151 cpr5 0.58 >More info 0.54 >More info WT(COL) Original data GEO bulk
152 Cor hrpS 10h 0.67 >More info 0.45 >More info Mock 10h Cor hrpS Original data GEO bulk
153 DFPM 0.60 >More info 0.52 >More info control Original data GEO bulk
154 ced1 -0.59 >More info -0.53 >More info WT PEG 6hr seedlings Original data GEO bulk
155 eds16 whole leaf 5dpi -0.55 >More info -0.56 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
156 rosette leaves lcr 0.44 >More info 0.67 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
157 WT in -N 0.58 >More info 0.53 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
158 eif3h polysome 0.61 >More info 0.50 >More info WT polysome Original data GEO bulk
159 del1-1 mutant 5d uninfected 0.49 >More info 0.62 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
160 Salt Stress 24 h (shoot) 0.59 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
161 WT Bc inoculation 14h 0.67 >More info 0.43 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
162 mil4 BTH 0.52 >More info 0.58 >More info Col BTH rosettes Original data GEO bulk
163 BI-1-3h IAA 0.60 >More info 0.50 >More info BI-1-0h IAA whole plant Original data GEO bulk
164 gun1-1 +lincomycin -0.51 >More info -0.59 >More info Col-0 +lincomycin Original data GEO bulk
165 gai Control 0.64 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
166 1 h Light Total RNA -0.51 >More info -0.59 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
167 penta Alternaria 3dpi 0.60 >More info 0.50 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
168 24h light (+Lincomycin) 0.52 >More info 0.58 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
169 anac017-2 AntimycinA 3h -0.49 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
170 NAA 6h 0.47 >More info 0.63 >More info before treatment NAA root Original data GEO bulk
171 +1.6 mM Tween 20 1 h. 0.45 >More info 0.65 >More info +distilled water 1 h. Original data GEO bulk
172 wrky33 Bc inoculation 14h 0.65 >More info 0.44 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
173 CMV-WT 0.54 >More info 0.55 >More info Mock-At Aerial tissues Original data GEO bulk
174 ein2-1 9 hpi A. brassicicola 0.53 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
175 PRR5-VP 12h light on -0.55 >More info -0.54 >More info WT 12h light on whole plant Original data GEO bulk
176 Nicotinamide-69hr 0.57 >More info 0.52 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
177 WT flg22 2h 0.60 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
178 Shoot -K 0.58 >More info 0.51 >More info Control-shoot Original data GEO bulk
179 K starvation (shoot) 0.58 >More info 0.51 >More info Ws (shoot) Original data GEO bulk
180 eto1-4 0.52 >More info 0.57 >More info Col-0 whole seedling Original data GEO bulk
181 ulp1c ulp1d +Pto 0.49 >More info 0.60 >More info ulp1c ulp1d mock Original data GEO bulk
182 Mutant iaa5_6_19(IAA) 0.56 >More info 0.52 >More info Col (IAA) Original data GEO bulk
183 low R/FR JA spray 0.57 >More info 0.51 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
184 Mature callus 0.62 >More info 0.46 >More info Young callus hypocotyls Original data GEO bulk
185 Elevated CO2 AMPLE N DAY 0.52 >More info 0.56 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
186 Te 1d 0.50 >More info 0.58 >More info Te CA Leaves Original data
187 Col 3d 0.55 >More info 0.53 >More info Col CA Leaves Original data
188 pepr1-1 Pepr2-3 +Pep2 2h -0.55 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
189 camta1/2/3 warm 0.53 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
190 4d red light grown hmr-5 seedlings 0.56 >More info 0.52 >More info 4d red light grown WT(Col-0) seedlings Original data
191 cngc19 0.66 >More info 0.42 >More info Col-0 root Original data GEO bulk
192 MIL4 ox BTH 0.52 >More info 0.56 >More info Col BTH Original data GEO bulk
193 abi4 vtc2 (I) 0.51 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
194 GST 4 h (leaf) 0.46 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
195 Col-0-avrB-6h 0.48 >More info 0.60 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
196 Cambium 5 days NAA 0.45 >More info 0.63 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
197 Laer pretreat GA+JA Flg22 0h 0.66 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
198 AvrRpm1 2 h (leaf) 0.55 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
199 Dex-rga(delta17) 4h GA4+DEX -0.53 >More info -0.54 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
200 Laer pretreat GA Flg22 2h 0.63 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
201 Nicotinamide-93hr 0.51 >More info 0.56 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
202 WT-SA 0.55 >More info 0.52 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
203 miR393 0h -0.54 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
204 low water potential 0.63 >More info 0.44 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
205 Dark 1day ivd 0.60 >More info 0.47 >More info 0h ivd Original data
206 pnp1-1 1wk +P 0.59 >More info 0.48 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
207 petiole in D 0.57 >More info 0.50 >More info petiole in WL petioles Original data GEO bulk
208 Laer pretreat GA+JA Flg22 1h 0.65 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
209 mbd6 mutant thaliana 10-day-old seedling 0.55 >More info 0.51 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
210 WT +elf18 10h 0.54 >More info 0.52 >More info WT untreated elf18 Original data GEO bulk
211 1h light (+Lincomycin) 0.51 >More info 0.55 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
212 col-5 hrpA 2h 0.54 >More info 0.52 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
213 pif4pif5 mut 1h FR -0.53 >More info -0.53 >More info WT 1h FR Original data GEO bulk
214 gpa1 -ABA LF 0.56 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
215 vtc2 (I) 0.48 >More info 0.58 >More info Col (I) rosette Original data GEO bulk
216 albino Ds13-2198-1 -0.34 >More info -0.72 >More info control Original data GEO bulk
217 dde2-2 9 hpi A. brassicicola 0.48 >More info 0.58 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
218 CT101 ozone 0.62 >More info 0.43 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
219 gh3.5D uninoculated -0.52 >More info -0.53 >More info Col-0 48 hpi Original data GEO bulk
220 Lipopolysaccaride4 h (leaf) 0.43 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
221 toc1-1-85hr -0.39 >More info -0.66 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
222 WT cold 0.48 >More info 0.57 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
223 gun1gun5 Norflurazon -0.47 >More info -0.58 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
224 Chemically 0.47 >More info 0.58 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
225 Col-0 Root 100 mM ATP 30 min -0.65 >More info -0.39 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
226 NahG 0.54 >More info 0.50 >More info Col-0 Leaves Original data GEO bulk
227 WT 1wk -P 0.56 >More info 0.48 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
228 pap1-D/tt4 0.52 >More info 0.52 >More info Col-0 aerial part Original data
229 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.62 >More info 0.42 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
230 Col whole leaf amplified 5 dpi 0.62 >More info 0.42 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
231 CMP 24hr 0.56 >More info 0.48 >More info Acetone 24hr root Original data GEO bulk
232 Atss3 Light4 -0.45 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
233 Col whole leaf 5 dpi 0.48 >More info 0.56 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
234 Col-0 6h NAA 0.44 >More info 0.60 >More info Col-0 6h MOCK Original data GEO bulk
235 1 h Light IP RNA -0.48 >More info -0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
236 2hr continuous KNO3 ECR cell 0.36 >More info 0.68 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
237 Elevated CO2 AMPLE N NIGHT 0.42 >More info 0.62 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
238 MYB12OX/tt4 0.46 >More info 0.58 >More info Col-0 aerial part Original data
239 treated group 0.45 >More info 0.59 >More info Control group Original data
240 Laer Flg22 1h 0.59 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
241 Primisulfuron EC50 0.54 >More info 0.49 >More info Carrier (primisulfuron) Original data GEO bulk
242 rpl24 total 0.57 >More info 0.46 >More info WT total seedling shoot/aerial seedling Original data
243 Laer Flg22+GA 2h 0.61 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
244 Te ozone 0.61 >More info 0.42 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
245 Red Light 4 h 0.44 >More info 0.59 >More info White Light 4 h Original data Light treatments
246 npr1 0.32 >More info 0.71 >More info WT(COL) Original data GEO bulk
247 Col ozone 2d 0.52 >More info 0.50 >More info Col clean-air 2d ozone Original data GEO bulk
248 phyABDE Rc50 -0.54 >More info -0.48 >More info phyABDE Dark red light whole seedling Original data GEO bulk
249 Ws leaf 100mM NaCl 0.49 >More info 0.53 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
250 WT NAA/flg 2h 0.47 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
251 Ws 100mM NaCl 0.49 >More info 0.53 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
252 cat2-2; 8h switch to ambient CO2 concentrations; 0.33 >More info 0.69 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
253 Dark 1day hml 0.60 >More info 0.41 >More info 0h hml Original data
254 T6 leaf-drought 0.51 >More info 0.50 >More info T6 leaf-well watered Original data GEO bulk
255 cpr5 0.50 >More info 0.51 >More info WT seedling Original data GEO bulk
256 Fei-0-3h IAA 0.49 >More info 0.52 >More info Fei-0-0h IAA whole plant Original data GEO bulk
257 Nicotinamide-49hr 0.41 >More info 0.60 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
258 Col-0-1h IAA 0.58 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
259 C24 ozone 0.61 >More info 0.39 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
260 Fenclorim 4hr 0.52 >More info 0.48 >More info Acetone 4hr root Original data GEO bulk
261 pnp1-1 3h -P 0.55 >More info 0.45 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
262 TAMM27 roots 2hr KCl control -0.52 >More info -0.48 >More info Col0 roots 2hr KCl control root Original data GEO bulk
263 coi1-16 ein2 sid2 ctrl -0.60 >More info -0.40 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
264 Dark 1day wt 0.58 >More info 0.42 >More info 0h wt Original data
265 Callus 0.48 >More info 0.52 >More info Control for tissue data callus Original data GEO bulk
266 gun1gun5 far-red pretreated -0.44 >More info -0.56 >More info WT far-red pretreated Original data GEO bulk
267 sid2-2 9 hpi A. brassicicola 0.49 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
268 npr1-1 SA -0.59 >More info -0.40 >More info Col-0 SA complete seedling Original data
269 csn5 (csn5a-2 csn5b) dark -0.62 >More info -0.37 >More info WT dark Original data GEO bulk
270 rcf1-1 cold 24h 0.51 >More info 0.48 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
271 ein2-PsmES4326-24hpi -0.52 >More info -0.47 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
272 col-5 DC3000-avrRpm 4h 0.54 >More info 0.45 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
273 Heat shock optimum 0.34 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
274 Col-0 ozone 0.60 >More info 0.38 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
275 OH1 0.51 >More info 0.47 >More info Col-0 leaves Original data GEO bulk
276 ABA DFPM 0.51 >More info 0.47 >More info control Original data GEO bulk
277 elf3-7-23ºC 0.33 >More info 0.65 >More info WT-23ºC Original data GEO bulk
278 NAA 3h 0.42 >More info 0.56 >More info before treatment NAA root Original data GEO bulk
279 WT-elf18 0.52 >More info 0.45 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
280 light -0.79 >More info -0.18 >More info dark light seedling Original data GEO bulk
281 Col-0 INA 6d 0.58 >More info 0.39 >More info Col-0 MOCK 6d Original data GEO bulk
282 Heat shock 20%Inhibition 0.52 >More info 0.45 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
283 Dark 6h wt 0.57 >More info 0.40 >More info 0h wt Original data
284 mkk2 24h BTH rep 0.42 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
285 gpa1 -ABA GC -0.42 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
286 smg7b-1 0.47 >More info 0.50 >More info WT whole plant Original data GEO bulk
287 afb3-1 2h KNO3 -0.44 >More info -0.53 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
288 low R/FR mock spray 0.45 >More info 0.52 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
289 35S::PI ap3-3 35S::AP-GR +DEX 0.41 >More info 0.56 >More info 0hr DEX Original data GEO bulk
290 Col leaf scrape 5 dpi 0.62 >More info 0.34 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
291 vte2 leaves 48h LT 0.51 >More info 0.45 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
292 UV Stress 24 h (shoot) 0.44 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
293 Mutant gh3.5-1D (AvrRpt2) 0.38 >More info 0.58 >More info Col-0 (AvrRpt2) Original data GEO bulk
294 rosette leaves bdg 0.30 >More info 0.66 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
295 JMJ24 knockout 0.46 >More info 0.50 >More info WT Original data GEO bulk
296 Laer Flg22+GA 1h 0.56 >More info 0.39 >More info Laer Control leaf discs Original data GEO bulk
297 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.60 >More info 0.35 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
298 rosettes WT drought 0.59 >More info 0.36 >More info rosettes WT watered Original data GEO bulk
299 Col-0 drought 0.53 >More info 0.42 >More info Col-0 control Original data GEO bulk
300 Laer pretreat JA Flg22 2h 0.60 >More info 0.35 >More info Laer pretreat water control leaf discs Original data GEO bulk
301 tunicamycin -0.42 >More info -0.53 >More info DMF Original data GEO bulk
302 Dark 6h hml 0.54 >More info 0.40 >More info 0h hml Original data
303 WT powdery mildew 0.54 >More info 0.40 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
304 AVG 3 h -0.28 >More info -0.66 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
305 roots IAA 0.38 >More info 0.56 >More info roots mock Original data GEO bulk
306 gun1-9 norflurazon 0.53 >More info 0.41 >More info gun1-9 control Original data GEO bulk
307 eif3h non-polysome 0.59 >More info 0.35 >More info WT non-polysome Original data GEO bulk
308 T8 leaf-drought 0.51 >More info 0.43 >More info T8 leaf-well watered Original data GEO bulk
309 npr1-PsmES4326-24hpi -0.51 >More info -0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
310 4h light (+Lincomycin) 0.52 >More info 0.42 >More info 4h light (-Lincomycin) seedlings Original data GEO bulk
311 leaf blade in FRD 0.43 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
312 cca1-lhy 30m light 0.37 >More info 0.57 >More info 30m light whole seedlings Original data GEO bulk
313 IAA 12h 0.42 >More info 0.52 >More info control 12h root Original data GEO bulk
314 Laer pretreat JA Flg22 1h 0.56 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
315 Col-7 Sucrose 0.53 >More info 0.40 >More info col-7 Original data GEO bulk
316 Col-0 2h NAA 0.38 >More info 0.55 >More info Col-0 6h MOCK Original data GEO bulk
317 pho1 0.51 >More info 0.42 >More info Col2WT Original data GEO bulk
318 Heat shock 30%Inhibition 0.50 >More info 0.43 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
319 root callus inducing medium 48 h 0.43 >More info 0.50 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
320 S15-118 0.42 >More info 0.51 >More info wt Original data GEO bulk
321 IAA 2h 0.35 >More info 0.58 >More info control 2h root Original data GEO bulk
322 fls1-3 0.42 >More info 0.51 >More info Col-0 Rosette leaves Original data
323 35S-MIF1 dark grown 0.54 >More info 0.38 >More info Dark-grown WT control Original data GEO bulk
324 gpa1-4/agb1-2 ozone 2d -0.50 >More info -0.42 >More info Col ozone 2d ozone Original data GEO bulk
325 csn3-1 dark -0.57 >More info -0.35 >More info WT dark Original data GEO bulk
326 IAA 8h 0.42 >More info 0.50 >More info control 8h root Original data GEO bulk
327 col-5 hrpA 4h 0.51 >More info 0.40 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
328 LTN008-2 aza-dc 0.55 >More info 0.36 >More info LTN012-2 Mock Original data
329 ARR21C-ox 0.56 >More info 0.35 >More info Col-0 Original data ARR21C overexpression
330 tt4 -0.39 >More info -0.52 >More info WT aerial region Original data GEO bulk
331 abh1 -ABA 0.39 >More info 0.52 >More info Col-0 -ABA Original data GEO bulk
332 ein3 eil1 JA -0.34 >More info -0.56 >More info JA Whole seedling Original data GEO bulk
333 atmospheric CO2 low Mg shoot 0.54 >More info 0.36 >More info atmospheric CO2 normal Mg shoot Shoot Original data
334 sfr2 control -0.40 >More info -0.50 >More info WT control All aerial tissue Original data GEO bulk
335 WT 2-4h Xanthomonas 0.29 >More info 0.61 >More info WT T0 Original data GEO bulk
336 35:SUB1C 0.51 >More info 0.38 >More info WT whole seedling Original data GEO bulk
337 Laer pretreat GA Flg22 0h 0.65 >More info 0.24 >More info Laer pretreat water control leaf discs Original data GEO bulk
338 Bur-0-1h IAA 0.52 >More info 0.37 >More info Bur-0h IAA whole plant Original data GEO bulk
339 WT 3h -P 0.37 >More info 0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
340 ani1 T0.5 -0.33 >More info -0.55 >More info WT T0.5 root tissue Original data GEO bulk
341 T101D 10mM NH4NO3 0.34 >More info 0.54 >More info col 10mM NH4NO3 Root Original data
342 Pseudomonas 0.36 >More info 0.52 >More info Control pseudomonas treated whole seedling Original data GEO bulk
343 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.37 >More info 0.51 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
344 miR393 flg22 2h 0.33 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
345 sid2 -0.52 >More info -0.35 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
346 C2 leaf-drought 0.52 >More info 0.35 >More info C2 leaf-well watered Original data GEO bulk
347 6m.KCl -0.50 >More info -0.37 >More info To. KCl 14 day old Roots Original data GEO bulk
348 SPT4-R3 seedlings0 DAS 0.50 >More info 0.37 >More info Col-0 seedlings0 DAS seedlings Original data
349 Mutant lfy-12(shoot apex) -0.53 >More info -0.33 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
350 35S-MIF1 light grown 0.54 >More info 0.32 >More info Light-grown WT control Original data GEO bulk
351 atmyc2 Seedling BL -0.20 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
352 root callus inducing medium 24h 0.36 >More info 0.50 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
353 rosettes myoox drought 0.53 >More info 0.32 >More info rosettes myoox watered Original data GEO bulk
354 WT no Pi 0.53 >More info 0.32 >More info WT complete seedlings Original data
355 Mutant nph4-1_arf19-1 (IAA) -0.34 >More info -0.51 >More info Col (IAA) Original data GEO bulk
356 coi1-16 ein2 sid2 ozone 0.58 >More info 0.27 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
357 Dark 4 h pls UV-AB 5min -0.53 >More info -0.31 >More info Dark 4 h Original data Light treatments
358 total mRNA eif3k 0.33 >More info 0.51 >More info total mRNA WT aerial part Original data GEO bulk
359 csn4-1 mutant -0.57 >More info -0.27 >More info WT dark Original data GEO bulk
360 35S:VND7-VP16-GR+CHX 0.56 >More info 0.27 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
361 ACC 3 h 0.29 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
362 shoot control p35S 0.21 >More info 0.62 >More info shoot control total Original data GEO bulk
363 pif4pif5 mut 24h FR -0.29 >More info -0.53 >More info WT 24h FR Original data GEO bulk
364 sfr3 cold 0.61 >More info 0.21 >More info WT-cold aerial tissues Original data GEO bulk
365 upf3 0.29 >More info 0.52 >More info WT whole plant Original data GEO bulk
366 BR 0.27 >More info 0.54 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
367 WT (Col-0) inflorescence drought day 10 0.52 >More info 0.28 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
368 16h Col-0 0.24 >More info 0.56 >More info 00h Col-0 Original data GEO bulk
369 08h Col-0 0.26 >More info 0.54 >More info 00h Col-0 Original data GEO bulk
370 Mutant nph4-1 (IAA) -0.26 >More info -0.53 >More info Col (IAA) Original data GEO bulk
371 root - 08% oxygen - 2h 0.05 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
372 des1.1 0.27 >More info 0.52 >More info Leaves-WT leaf Original data GEO bulk
373 Stem tissue 2 days NAA 0.07 >More info 0.72 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
374 Col-0 low R/FR 0.17 >More info 0.62 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
375 epidermis control 0.29 >More info 0.50 >More info Control for tissue data mock epidermis Original data GEO bulk
376 IAA 0.5h 0.19 >More info 0.60 >More info control 0.5h root Original data GEO bulk
377 Red/FR Light45min 0.06 >More info 0.72 >More info FarRed Light 45min Original data Light treatments
378 SA 4mM 0.59 >More info 0.18 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
379 glk1 glk2 GLK1-GR +DEX 4h -0.22 >More info -0.55 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
380 AtLysM RLK1 mutant water -0.51 >More info -0.24 >More info WT water Original data GEO bulk
381 Full AC2 T2 0.50 >More info 0.25 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
382 FAMA induced 48h 0.57 >More info 0.17 >More info control 48h Whole seedling Original data GEO bulk
383 EL (leaves 1-2) 14DAS -0.59 >More info -0.15 >More info Control for tissue data Original data GEO bulk
384 pmr4-1 powdery mildew 0.24 >More info 0.50 >More info WT powdery mildew uninoculated Original data GEO bulk
385 low CO2 + dark 0.50 >More info 0.23 >More info normal CO2 + light Original data GEO bulk
386 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
387 shoot hypoxia p35S 0.11 >More info 0.62 >More info shoot hypoxia total Original data GEO bulk
388 2hr transitory KNO3 ECR cell 0.20 >More info 0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
389 ABA control 0.51 >More info 0.21 >More info No ABA control Original data GEO bulk
390 35:SUB1A 0.53 >More info 0.19 >More info WT whole seedling Original data GEO bulk
391 root - 08% oxygen - 30min 0.10 >More info 0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
392 IAA 1h 0.15 >More info 0.57 >More info control 1h root Original data GEO bulk
393 E.orontii Infection 3 day 0.17 >More info 0.54 >More info Uninfection 3 day Original data Elicitor treatments
394 Shoot submergence 7h 0.71 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
395 ML (Mature leaves) 35DAS -0.59 >More info -0.12 >More info Control for tissue data Original data GEO bulk
396 detached inflorescences 24h 0.54 >More info 0.16 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
397 leaf -0.56 >More info -0.14 >More info Control for tissue data leaf Original data GEO bulk
398 erf104-ko H2O 4h -0.55 >More info -0.14 >More info Col-0 H2O 4h Original data GEO bulk
399 Truncated AC2 T2 -0.60 >More info -0.09 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
400 Dark 2day ivd 0.70 >More info -0.01 >More info 0h ivd Original data
401 MYB76 OE 0.18 >More info 0.51 >More info WT for MYB29/76 Original data GEO bulk
402 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
403 Ambient CO2 expanding leaf -0.60 >More info -0.08 >More info Control for tissue data expanding leaf Original data
404 rosettes atx drought 0.51 >More info 0.16 >More info rosettes atx watered Original data GEO bulk
405 AsAKiin11 T2 0.50 >More info 0.17 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
406 AtMYB30-ox 90-105 min Xanthomonas 0.50 >More info 0.17 >More info WT 90-105 min Xanthomonas Original data GEO bulk
407 ein2 1% sucrose 14-day-old -0.11 >More info -0.55 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
408 bio4-1 mutant leaves 0.10 >More info 0.56 >More info WT leaves leaves Original data GEO bulk
409 12h Col-0 0.16 >More info 0.50 >More info 00h Col-0 Original data GEO bulk
410 seedling 12h after Gamma atm-1 0.10 >More info 0.56 >More info seedling day 1 unirradiated atm-1 12h Original data
411 WT cotyledons -0.60 >More info -0.05 >More info Control for tissue data cotyledons Original data
412 MYB29 OE 0.15 >More info 0.50 >More info WT for MYB29/76 Original data GEO bulk
413 HairpinZ 4 h (leaf) 0.67 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
414 Expanding leaf -0.57 >More info -0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
415 SA Treated 0.55 >More info 0.08 >More info Water Original data GEO bulk
416 Imbibed 1 h (seed) 0.02 >More info 0.61 >More info Dry seed Original data Time course of early seed germination
417 35S::ERF104 H2O 4h -0.51 >More info -0.11 >More info Col-0 H2O 4h Original data GEO bulk
418 pskr1-5 -0.53 >More info -0.09 >More info wild type Cotyledons Original data GEO bulk
419 Ambient CO2 fully expanded leaf -0.56 >More info -0.05 >More info Control for tissue data fully expanded leaf Original data
420 Rosette leaf No12 -0.59 >More info -0.02 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
421 anac017-2 water 3h -0.51 >More info -0.10 >More info WT water 3h 3h_water Original data GEO bulk
422 MPK6 ox Shoot Hypoxia -0.03 >More info 0.64 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
423 GRX-overexpression seedlings MV 0.10 >More info 0.51 >More info WT seedlings MV Seedlings Original data GEO bulk
424 seedling 12h after HZE atm-1 0.09 >More info 0.52 >More info seedling day 1 unirradiated atm-1 12h Original data
425 Cotyledons -0.54 >More info -0.05 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
426 pvip1 pvip2 seedling 0.60 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
427 Polysomal RNA 35S:HF-RPL18 0.08 >More info 0.50 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
428 Emwa1 inoculated psk 3 dpi -0.50 >More info -0.07 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
429 Col-0 Flg22 4h 0.07 >More info 0.50 >More info Col-0 H2O 4h Original data GEO bulk
430 Apex 5DAS -0.55 >More info -0.01 >More info Control for tissue data Original data GEO bulk
431 Proximalhalf (leaf7) -0.54 >More info -0.02 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
432 Col-0 24hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
433 seed germinating in countinuous light 24h SL -0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
434 irradiated leaf (WT 5d) -0.00 >More info -0.55 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
435 Distal half (leaf7) -0.52 >More info -0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
436 Apex 14DAS -0.55 >More info 0.02 >More info Control for tissue data Original data GEO bulk
437 root - 04% oxygen - 2h -0.13 >More info 0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
438 etiolated cop1 -0.57 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
439 penta Flg22 1h 0.54 >More info -0.02 >More info Laer Flg22 1h leaf discs Original data GEO bulk
440 sex4-3 -0.52 >More info 0.00 >More info Col-WT leaves Original data GEO bulk
441 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
442 P. infestans 6 h (leaf) 0.66 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
443 xyl-grown cell culture- 1h 1mM Fru -0.01 >More info -0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
444 Dex-rga(delta17) 4h GA4 -0.00 >More info -0.50 >More info Vector 4h GA4 shoots Original data GEO bulk
445 mpk6-ko H2O 4h -0.53 >More info 0.04 >More info Col-0 H2O 4h Original data GEO bulk
446 Col PSTDC3000 24h 0.62 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
447 Pedicels stage15 -0.52 >More info 0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
448 AtMYB30-ox 2-4h Xanthomonas 0.53 >More info -0.05 >More info WT 2-4h Xanthomonas Original data GEO bulk
449 Rosette leaf No2 -0.50 >More info 0.02 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
450 Petiol (leaf7) -0.52 >More info 0.06 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
451 35S:RPS4 rrs1-11 24h -0.51 >More info 0.05 >More info 35S:RPS4 24h leaves Original data
452 Ba1 UV -0.05 >More info 0.51 >More info Ba1 mock UV seedling Original data
453 Ambient CO2 leaf primordia -0.56 >More info 0.11 >More info Control for tissue data leaf primordia Original data
454 Shoot apex vegetative &Young leaves -0.52 >More info 0.08 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
455 ptpks2 -0.50 >More info 0.13 >More info Col-WT leaves Original data GEO bulk
456 root - 04% oxygen - 30min -0.20 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
457 WT Shoot Hypoxia -0.18 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
458 sex1-3 -0.18 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
459 Shoot apex inflorescence (after bolting) -0.37 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
460 bri1-116 -0.54 >More info 0.73 >More info Col seedling Original data GEO bulk
461 Light 3day hml -0.49 >More info 0.59 >More info 0h hml Original data