4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT cotyledons
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List of experiments correlated with "WT cotyledons"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT cotyledons		 Correlation to
WT cotyledons		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT cotyledons 1.00 >More info 1.00 >More info Control for tissue data cotyledons Original data
2 Ambient CO2 expanding leaf 0.95 >More info 0.96 >More info Control for tissue data expanding leaf Original data
3 Ambient CO2 leaf primordia 0.95 >More info 0.95 >More info Control for tissue data leaf primordia Original data
4 Shoot apex vegetative &Young leaves 0.95 >More info 0.95 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
5 Rosette leaf No12 0.95 >More info 0.95 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
6 seed germinating in countinuous light 48 h SL 0.94 >More info 0.95 >More info Control for tissue data seed Original data GEO bulk
7 seedling 0.94 >More info 0.95 >More info Control for tissue data seedling Original data GEO bulk
8 EL (leaves 1-2) 14DAS 0.94 >More info 0.94 >More info Control for tissue data Original data GEO bulk
9 Expanding leaf 0.94 >More info 0.94 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
10 Petiol (leaf7) 0.93 >More info 0.94 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
11 Apex 14DAS 0.94 >More info 0.93 >More info Control for tissue data Original data GEO bulk
12 Shoot apex vegetative 0.93 >More info 0.94 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
13 Apex 5DAS 0.93 >More info 0.93 >More info Control for tissue data Original data GEO bulk
14 Pedicels stage15 0.93 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
15 Ambient CO2 fully expanded leaf 0.93 >More info 0.93 >More info Control for tissue data fully expanded leaf Original data
16 ML (Mature leaves) 35DAS 0.93 >More info 0.92 >More info Control for tissue data Original data GEO bulk
17 Flower (stage12) 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
18 Shoot apex transition (before bolting) 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
19 siliques 0.92 >More info 0.93 >More info Control for tissue data Original data GEO bulk
20 Cotyledons 0.92 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
21 Hypocotyl 0.92 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
22 Proximalhalf (leaf7) 0.92 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 Seeds stage3 with siliques 0.92 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
24 seed germinating in countinuous light 12 h SL 0.91 >More info 0.93 >More info Control for tissue data seed Original data GEO bulk
25 Stem 1st node 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 Inflorescences ler 0.91 >More info 0.92 >More info Control for tissue data inflorescences Original data GEO bulk
27 Carpels stage15 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
28 leaf 0.91 >More info 0.92 >More info Control for tissue data leaf Original data GEO bulk
29 unpollinated pistil 0.91 >More info 0.92 >More info Control for tissue data pistil Original data GEO bulk
30 flowers 0.91 >More info 0.92 >More info Control for tissue data Original data GEO bulk
31 Bud 0.90 >More info 0.92 >More info Control for tissue data pollen grains and tubes Original data
32 Leaf 0.91 >More info 0.91 >More info Control for tissue data leaf Original data GEO bulk
33 flower-buds 0.91 >More info 0.91 >More info Control for tissue data Original data GEO bulk
34 Distal half (leaf7) 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
35 Rosette leaf No2 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
36 Flowers stage15 0.90 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 lec1-1 Mature Green Seed 0.90 >More info 0.91 >More info Control for tissue data Original data GEO bulk
38 silique 0.90 >More info 0.91 >More info Control for tissue data silique Original data GEO bulk
39 seed germinating in countinuous light 6 h SL 0.89 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
40 lateral nectary stage 11-12 0.90 >More info 0.90 >More info Control for tissue data lateral nectaries Original data GEO bulk
41 in vivo pollen tube 0.90 >More info 0.90 >More info Control for tissue data pollen tube Original data GEO bulk
42 Stem 2ndinternode 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
43 flower 0.90 >More info 0.90 >More info Control for tissue data flower Original data GEO bulk
44 Cauline leaves 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
45 Callus 0.88 >More info 0.91 >More info Control for tissue data callus Original data GEO bulk
46 KAN1 0.89 >More info 0.90 >More info Control for tissue data shoot apical meristem Original data GEO bulk
47 ovule 0.89 >More info 0.90 >More info Control for tissue data ovule Original data GEO bulk
48 Atape2 low light 0.89 >More info 0.90 >More info Control for tissue data shoot apical meristem Original data GEO bulk
49 lec1-1 24h post-fertilization Seed 0.88 >More info 0.90 >More info Control for tissue data Original data GEO bulk
50 lec1-1 Globular Stage Seed 0.88 >More info 0.90 >More info Control for tissue data Original data GEO bulk
51 B5 +AA -0.90 >More info -0.88 >More info B5 -AA B5 media and treated with AA Original data
52 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.87 >More info 0.91 >More info Control for tissue data Original data GEO bulk
53 lec1-1 Post-Mature Green Seed 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
54 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.87 >More info 0.91 >More info Control for tissue data Original data GEO bulk
55 Senescing leaf 0.89 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.91 >More info Control for tissue data Original data GEO bulk
57 Petals stage15 0.88 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 LAS 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
59 median nectary stage 14-15 0.88 >More info 0.89 >More info Control for tissue data median nectaries Original data GEO bulk
60 seed during stratification 48 h S 0.88 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
61 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.91 >More info Control for tissue data Original data GEO bulk
62 lec1-1 Cotyledon Stage Seed 0.88 >More info 0.89 >More info Control for tissue data Original data GEO bulk
63 Nuclei proembryo 0.87 >More info 0.90 >More info Control for tissue data proembryo Original data
64 Cells whole embryo 0.88 >More info 0.89 >More info Control for tissue data whole embryo Original data
65 HDG4 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
66 S17 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
67 torpedo-basal 0.88 >More info 0.89 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
68 seed germinating in countinuous light 1 h SL 0.88 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
69 Nuclei suspensor 0.87 >More info 0.89 >More info Control for tissue data suspensor Original data
70 Mature roots 0.86 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
71 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.86 >More info 0.90 >More info Control for tissue data Original data GEO bulk
72 Sepals stage15 0.88 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 lateral nectary stage 14-15 0.88 >More info 0.88 >More info Control for tissue data lateral nectaries Original data GEO bulk
74 NAA +AA -0.89 >More info -0.87 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
75 heart-stage-root 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
76 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.86 >More info 0.90 >More info Control for tissue data Original data GEO bulk
77 Section Root from70 mm to 340 mm harvested
immediately		 0.86 >More info 0.90 >More info Control for tissue data Original data GEO bulk
78 AtHB8 0.88 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
79 HMG 0.88 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
80 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.90 >More info Control for tissue data Original data GEO bulk
81 cortex 0.86 >More info 0.89 >More info Control for tissue data cortex Original data GEO bulk
82 Anther 0.87 >More info 0.88 >More info Control for tissue data anther Original data
83 Emwa1 inoculated psk 3 dpi 0.89 >More info 0.86 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
84 heart-stage-cotyledon 0.87 >More info 0.88 >More info Control for tissue data Original data GEO bulk
85 torpedo-meristem 0.87 >More info 0.87 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
86 globular-apical 0.86 >More info 0.88 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
87 pskr1-5 0.89 >More info 0.85 >More info wild type Cotyledons Original data GEO bulk
88 Col dryseed 0.87 >More info 0.86 >More info Control for tissue data dry seeds Original data
89 globular-basal 0.86 >More info 0.87 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
90 mature endodermis glcal 0.85 >More info 0.87 >More info Control for tissue data endodermis Original data GEO bulk
91 Seeds stage8 w/o siliques 0.87 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
92 differentiating xylem 0.85 >More info 0.87 >More info Control for tissue data xylem Original data GEO bulk
93 Stamen stage15 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 phloem sieve cells and companion cells 0.85 >More info 0.87 >More info Control for tissue data phloem Original data GEO bulk
95 seed during stratification 12 h S 0.87 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
96 whole seeds mature green 0.86 >More info 0.86 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
97 embryo proper 0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
98 root hair 0.85 >More info 0.86 >More info Control for tissue data root hairs Original data GEO bulk
99 whole seeds 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
100 peripheral endosperm heart stage 0.85 >More info 0.86 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
101 dry seed 0 h 0.86 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
102 seed freshly harvested H 0.86 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
103 seed during stratification 1 h S 0.86 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
104 torpedo-root 0.86 >More info 0.84 >More info Control for tissue data Original data GEO bulk
105 embryo proper mature green 0.85 >More info 0.85 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
106 embryo proper heart stage 0.84 >More info 0.86 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
107 micropylar endosperm heart stage 0.84 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
108 peripherial endosperm 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
109 whole seeds heart stage 0.84 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
110 chalazal endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
111 QC 0.82 >More info 0.86 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
112 seed coat heart stage 0.83 >More info 0.85 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
113 micropylar endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
114 peripheral endosperm mature green 0.83 >More info 0.84 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
115 chalazal endosperm 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
116 chalazal seed coat mature green 0.83 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
117 Mature pollen 0.84 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
118 seed coat 0.84 >More info 0.83 >More info Control for tissue data Original data GEO bulk
119 pericycle control 0.81 >More info 0.85 >More info Control for tissue data mock pericycle Original data GEO bulk
120 chalazal endosperm heart stage 0.83 >More info 0.83 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
121 intact root control 0.82 >More info 0.84 >More info Control for tissue data mock whole root Original data GEO bulk
122 chalazal seed coat 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
123 pollen 0.83 >More info 0.82 >More info Control for tissue data pollen grain Original data GEO bulk
124 Salicylic Acid 3 h -0.89 >More info -0.76 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
125 seed coat mature green 0.83 >More info 0.82 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
126 in vitro pollen tube 0.83 >More info 0.81 >More info Control for tissue data pollen tube Original data
127 epidermis control 0.80 >More info 0.83 >More info Control for tissue data mock epidermis Original data GEO bulk
128 seed germinating in countinuous light 24h SL 0.92 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 Shoot apex inflorescence (after bolting) 0.91 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 L17 phyA line -0.82 >More info -0.70 >More info WT seedling Original data GEO bulk
131 erf104-ko Flg22 4h -0.72 >More info -0.65 >More info erf104-ko H2O 4h Original data GEO bulk
132 chalazal seed coat heart stage 0.82 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
133 miR393 0h 0.61 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
134 Col leaf scrape 5 dpi -0.66 >More info -0.44 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
135 Laer Flg22+GA 1h -0.57 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
136 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.55 >More info -0.54 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
137 abi3-6 16 DAF Seed 0.51 >More info 0.58 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
138 flu over-tAPX -0.50 >More info -0.59 >More info WT Col Original data GEO bulk
139 35S:RPS4 eds1-2 8h 0.47 >More info 0.62 >More info 35S:RPS4 8h leaves Original data
140 Laer Flg22 1h -0.56 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
141 C2H2 ZF TDNA mutant -0.62 >More info -0.46 >More info Col-WT mature pollen Original data GEO bulk
142 col-5 DC3000-avrRpm 4h -0.47 >More info -0.61 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
143 Cycloheximide 3 h -0.54 >More info -0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
144 mpk6-ko H2O 4h 0.69 >More info 0.38 >More info Col-0 H2O 4h Original data GEO bulk
145 Laer Flg22 2h -0.47 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
146 Laer Flg22+GA 2h -0.49 >More info -0.57 >More info Laer Control leaf discs Original data GEO bulk
147 sfr3 cold -0.72 >More info -0.33 >More info WT-cold aerial tissues Original data GEO bulk
148 Starch sheath 2 days NAA 0.66 >More info 0.39 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
149 WT flg22 2h -0.48 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
150 24h SL Attim 17-1 1 0.50 >More info 0.53 >More info 0 h Attim 17-1 1 seed Original data
151 bZIP TDNA mutant -0.60 >More info -0.43 >More info Col-WT mature pollen Original data GEO bulk
152 DFPM -0.45 >More info -0.58 >More info control Original data GEO bulk
153 pad4-PsmES4326-24hpi 0.38 >More info 0.64 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
154 E.coli TUV86 2 fliC 7h -0.35 >More info -0.66 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
155 sex4-3 0.60 >More info 0.40 >More info Col-WT leaves Original data GEO bulk
156 torpedo-apical 0.89 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
157 CMP 24hr -0.43 >More info -0.57 >More info Acetone 24hr root Original data GEO bulk
158 DC3000 7h -0.45 >More info -0.55 >More info Mock 7h DC3000 Original data GEO bulk
159 col-5 DC3000 12h -0.37 >More info -0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
160 WT light 0.42 >More info 0.58 >More info WT dark Original data GEO bulk
161 24h SL WT 0.49 >More info 0.51 >More info 0 h WT seed Original data
162 tbf1-elf18 0.59 >More info 0.40 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
163 Col-Luc WT 3h antimycin A -0.53 >More info -0.46 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
164 HopZ1a treated -0.38 >More info -0.61 >More info col Original data GEO bulk
165 ABA DFPM -0.47 >More info -0.51 >More info control Original data GEO bulk
166 E.coli 0157 H7 7h -0.34 >More info -0.64 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
167 npr1-1 SA 0.43 >More info 0.55 >More info Col-0 SA complete seedling Original data
168 Nuclei whole embryo 0.87 >More info 0.10 >More info Control for tissue data whole embryo Original data
169 tbf1-mock spray -0.61 >More info -0.36 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
170 2h KNO3 Whole root 0.63 >More info 0.34 >More info 2h KCl control Whole root Whole root Original data GEO bulk
171 Col ozone 3h -0.37 >More info -0.60 >More info Col clean-air 3h ozone Original data GEO bulk
172 anac017-2 AntimycinA 3h 0.41 >More info 0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
173 35S:RPS4 eds1-2 24h 0.33 >More info 0.64 >More info 35S:RPS4 24h leaves Original data
174 HSP90 Reduced RNAi-A3 -0.66 >More info -0.30 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
175 chalazal endosperm linear-cotyledon -0.43 >More info -0.53 >More info whole seeds linear-cotyledon Original data GEO bulk
176 Flagellin 4 h (leaf) -0.40 >More info -0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
177 Laer pretreat GA+JA Flg22 0h -0.40 >More info -0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
178 Cor 10h -0.40 >More info -0.55 >More info Mock 10h Cor Original data GEO bulk
179 Starch sheath 5 days MS incubation 0.60 >More info 0.35 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
180 2hr continuous KNO3 ECR cell -0.42 >More info -0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
181 Laer pretreat GA Flg22 0h -0.37 >More info -0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
182 WT Seedling BL 0.34 >More info 0.60 >More info WT Seedling Dark Original data GEO bulk
183 pepr1-1 Pepr2-3 +Pep2 2h 0.39 >More info 0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
184 col-5 hrpA 2h -0.40 >More info -0.53 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
185 efr-1 +elf18 10h 0.29 >More info 0.64 >More info WT +elf18 10h elf18 Original data GEO bulk
186 hrpA 7h -0.24 >More info -0.69 >More info Mock 7h hrpA Original data GEO bulk
187 FLIGHT BRIC G PDFU-112 seedlings 0.43 >More info 0.50 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
188 pif4pif5 mut dark 0.52 >More info 0.40 >More info WT dark Original data GEO bulk
189 seedlings protease IV -0.38 >More info -0.54 >More info seedlings nontreated control whole seedling Original data
190 WT Atum 1h 0.63 >More info 0.29 >More info WT 0h Leaf tissue Original data GEO bulk
191 ataf1-1 mutant Col-0 Bgh inoculated -0.35 >More info -0.57 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
192 Laer pretreat GA+JA Flg22 1h -0.41 >More info -0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
193 col-5 hrpA 12h -0.29 >More info -0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
194 ptpks2 0.63 >More info 0.28 >More info Col-WT leaves Original data GEO bulk
195 Dark 4 h pls RedLight 1min 0.27 >More info 0.64 >More info Dark 4 h Original data Light treatments
196 Laer pretreat GA+JA Flg22 2h -0.38 >More info -0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
197 2hr continuous KCl and MSX control PeR cell -0.39 >More info -0.52 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
198 Dex-rga(delta17) 4h GA4+DEX 0.28 >More info 0.63 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
199 T101D 10mM NH4NO3 -0.28 >More info -0.63 >More info col 10mM NH4NO3 Root Original data
200 erf104-ko H2O 4h 0.70 >More info 0.21 >More info Col-0 H2O 4h Original data GEO bulk
201 atr zebularine -0.59 >More info -0.32 >More info WT zebularine shoot apical meristem Original data
202 pad2-PsmES4326-24hpi 0.34 >More info 0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
203 mpk6-ko Flg22 4h -0.35 >More info -0.55 >More info mpk6-ko H2O 4h Original data GEO bulk
204 HopZ1a treated ulp1c ulp1d -0.35 >More info -0.55 >More info col Original data GEO bulk
205 WT AntimycinA 3h -0.39 >More info -0.51 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
206 tcp13/+ tcp14/+ 0.36 >More info 0.54 >More info WT inflorescences Original data GEO bulk
207 bak1-3 +Pep2 10h -0.33 >More info -0.56 >More info WT +Pep2 10h Pep2 Original data GEO bulk
208 bri1-116 0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
209 rdr6-15 0.26 >More info 0.63 >More info Col-0 plant inflorescence Original data
210 GST NPP1 4 h (leaf) -0.32 >More info -0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
211 Phaseolicola 2 h (leaf) -0.34 >More info -0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
212 Got7 UV -0.53 >More info -0.35 >More info Got7 mock UV seedling Original data
213 polysome mRNA eif3k 0.60 >More info 0.28 >More info polysome mRNA WT aerial part Original data GEO bulk
214 Full C2 T2 -0.35 >More info -0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
215 Starch sheath 2 days MS incubation 0.57 >More info 0.31 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
216 Laer treat paclobutrazol (PAC) -0.28 >More info -0.59 >More info Laer Control leaf discs Original data GEO bulk
217 WT-elf18 -0.50 >More info -0.36 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
218 35S::ERF104 Flg22 4h -0.23 >More info -0.63 >More info 35S::ERF104 H2O 4h Original data GEO bulk
219 rosettes WT drought -0.35 >More info -0.51 >More info rosettes WT watered Original data GEO bulk
220 columella control 0.81 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
221 Inflorescences Trp1 0.31 >More info 0.53 >More info Inflorescences ler inflorescences Original data GEO bulk
222 35S::ERF104 H2O 4h 0.69 >More info 0.15 >More info Col-0 H2O 4h Original data GEO bulk
223 35S:VND7-VP16-GR+CHX -0.27 >More info -0.57 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
224 hrcC -0.25 >More info -0.59 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
225 Heat and anoxia -0.51 >More info -0.32 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
226 Dark 4 h pls UV-A 5 min 0.29 >More info 0.54 >More info Dark 4 h Original data Light treatments
227 phyABDE Rc50 0.33 >More info 0.50 >More info phyABDE Dark red light whole seedling Original data GEO bulk
228 rosettes myoox drought -0.32 >More info -0.50 >More info rosettes myoox watered Original data GEO bulk
229 DC3000 2 h (leaf) -0.25 >More info -0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
230 WT Red light 18h 0.23 >More info 0.59 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
231 met1-3 fourth-selfed generation -0.24 >More info -0.58 >More info Col WT leaf Original data GEO bulk
232 mbd11 mutant thaliana 10-day-old seedling -0.53 >More info -0.28 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
233 Col-0 C2H4 24h -0.26 >More info -0.55 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
234 penta Alternaria 3dpi -0.28 >More info -0.53 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
235 IMI 4mM -0.28 >More info -0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
236 Heat shock optimum 0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
237 Botrytis cinerea 48h -0.26 >More info -0.55 >More info control 48h Original data GEO bulk
238 Dex-rga(delta17) 2h GA4+DEX 0.19 >More info 0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
239 WT in -N -0.24 >More info -0.57 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
240 Light 3day wt 0.56 >More info 0.24 >More info 0h wt Original data
241 Col whole leaf amplified 5 dpi -0.27 >More info -0.52 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
242 phr1 Shoot-Pi 0.16 >More info 0.63 >More info WT Root-Pi shoots Original data GEO bulk
243 WT-SA -0.26 >More info -0.53 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
244 WT +elf18 10h -0.24 >More info -0.55 >More info WT untreated elf18 Original data GEO bulk
245 torpedo-cotyledon 0.87 >More info -0.09 >More info Control for tissue data Original data GEO bulk
246 AvrRpm1 2 h (leaf) -0.25 >More info -0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
247 phyABCDE Rc50 0.22 >More info 0.56 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
248 cop1 Seedling Dark 0.27 >More info 0.51 >More info WT Seedling Dark Original data GEO bulk
249 C24 UV1 0.55 >More info 0.22 >More info C24 mock UV seedling Original data
250 flu -0.23 >More info -0.54 >More info WT Col Original data GEO bulk
251 Col-0 low oxygen -0.15 >More info -0.61 >More info Col-0 Original data GEO bulk
252 AvrRpt2 Col-0 6hpi -0.25 >More info -0.51 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
253 WT Col-0 Bgh inoculated -0.24 >More info -0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
254 eds16 whole leaf 7dpi 0.25 >More info 0.50 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
255 phr1 phl1 Root-Pi -0.14 >More info -0.61 >More info WT Shoot+Pi roots Original data GEO bulk
256 35SpBVR3 -0.23 >More info -0.52 >More info WT Original data GEO bulk
257 atr mock -0.53 >More info -0.21 >More info WT mock shoot apical meristem Original data
258 ani1 T0.5 0.16 >More info 0.57 >More info WT T0.5 root tissue Original data GEO bulk
259 rosette Dark Wounded -0.20 >More info -0.52 >More info rosette Dark Control Original data GEO bulk
260 camta2/3 warm -0.22 >More info -0.50 >More info WT warm entire aerial part Original data GEO bulk
261 GST 4 h (leaf) -0.13 >More info -0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
262 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.11 >More info 0.59 >More info 2d dark-grown WT seedling Original data GEO bulk
263 met1-3 second-selfed generation -0.20 >More info -0.50 >More info Col WT leaf Original data GEO bulk
264 clf-28 swn-7 -0.18 >More info -0.51 >More info Col whole plant Original data GEO bulk
265 cpr5scv1 -0.12 >More info -0.57 >More info WT(COL) Original data GEO bulk
266 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.56 >More info -0.12 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
267 WT 2-4h Xanthomonas -0.16 >More info -0.52 >More info WT T0 Original data GEO bulk
268 eds16 whole leaf 5dpi 0.07 >More info 0.61 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
269 Root GLU1-KO 0.53 >More info 0.14 >More info Root Col(0) roots Original data GEO bulk
270 Imbibed 24 h ABA 30uM (seed) -0.13 >More info -0.54 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
271 Col whole leaf 7dpi -0.12 >More info -0.55 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
272 Cocultivation 8 hrs leaf 0.62 >More info 0.04 >More info Mock cocultivation 8 hrs leaf Leaf Original data
273 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.16 >More info 0.50 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
274 Col-0-avrB-6h -0.12 >More info -0.54 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
275 aerial organ callus inducing medium 96 h -0.05 >More info -0.60 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
276 hsfa1 quadruple mutant -0.05 >More info -0.60 >More info WT (Col-0) whole seedling Original data GEO bulk
277 cpr5npr1svi1 -0.10 >More info -0.55 >More info WT(COL) Original data GEO bulk
278 Estradiol4 days -0.13 >More info -0.51 >More info Col Original data GEO bulk
279 estradiol induced LEC1 -0.13 >More info -0.51 >More info control Original data GEO bulk
280 G3P 0.12 >More info 0.52 >More info Mock distal leaves Original data GEO bulk
281 Col BTH -0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
282 WT NAA 2h 0.54 >More info 0.09 >More info WT 0h Leaf tissue Original data GEO bulk
283 cpr5 -0.09 >More info -0.54 >More info WT(COL) Original data GEO bulk
284 Mh0 UV 0.56 >More info 0.06 >More info Mh0 mock UV seedling Original data
285 Col whole leaf 5dpi -0.08 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
286 elevated CO2 high Mg shoot 0.52 >More info 0.09 >More info atmospheric CO2 high Mg shoot Shoot Original data
287 phosphate-starved -0.10 >More info -0.51 >More info control shoot tissue Original data GEO bulk
288 aerial organ callus inducing medium 48 h -0.05 >More info -0.53 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
289 aerial organ callus inducing medium 24h -0.07 >More info -0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
290 SQ8 roots 2hr KCl control -0.50 >More info -0.05 >More info Col0 roots 2hr KCl control root Original data GEO bulk
291 miR393 flg22 2h 0.08 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
292 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
293 WT flg22 1h 0.07 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
294 siliques AtHb1 control -0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
295 WT Atum 2h 0.54 >More info -0.11 >More info WT 0h Leaf tissue Original data GEO bulk
296 WT NAA/flg 1h 0.10 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
297 pmr4-1 powdery mildew 0.18 >More info -0.61 >More info WT powdery mildew uninoculated Original data GEO bulk
298 Ba1 UV 0.53 >More info -0.12 >More info Ba1 mock UV seedling Original data
299 FAMA induced 4h -0.57 >More info 0.16 >More info control 4h Whole seedling Original data GEO bulk
300 AFB1 flg22 1h 0.15 >More info -0.52 >More info WT 0h Leaf tissue Original data GEO bulk
301 IAA7mII over-expressor IAA Treated -0.35 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
302 Leafminer damaged seedlings -0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
303 tcp13 -0.18 >More info 0.51 >More info WT inflorescences Original data GEO bulk
304 miR393 flg22 1h 0.17 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
305 Laer pretreat GA Flg22 1h -0.39 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
306 Col0-PsmES4326-24hpi -0.40 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
307 Col-0 Flg22 4h 0.38 >More info -0.54 >More info Col-0 H2O 4h Original data GEO bulk