4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seed during stratification 1 h S
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List of experiments correlated with "seed during stratification 1 h S"  Help Download transcriptome of top 30
Score Experiment Correlation from
seed during stratification 1 h S
Correlation to
seed during stratification 1 h S
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 seed during stratification 1 h S 1.00 >More info 1.00 >More info Control for tissue data seed Original data GEO bulk
2 dry seed 0 h 0.97 >More info 0.97 >More info Control for tissue data seed Original data GEO bulk
3 seed freshly harvested H 0.97 >More info 0.97 >More info Control for tissue data seed Original data GEO bulk
4 seed during stratification 12 h S 0.97 >More info 0.95 >More info Control for tissue data seed Original data GEO bulk
5 Col dryseed 0.95 >More info 0.93 >More info Control for tissue data dry seeds Original data
6 Seeds stage8 w/o siliques 0.93 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
7 seed germinating in countinuous light 1 h SL 0.91 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
8 seed during stratification 48 h S 0.91 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
9 seed germinating in countinuous light 6 h SL 0.89 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
10 lec1-1 Post-Mature Green Seed 0.90 >More info 0.89 >More info Control for tissue data Original data GEO bulk
11 lec1-1 Mature Green Seed 0.88 >More info 0.89 >More info Control for tissue data Original data GEO bulk
12 seed germinating in countinuous light 12 h SL 0.88 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
13 Callus 0.86 >More info 0.88 >More info Control for tissue data callus Original data GEO bulk
14 median nectary stage 14-15 0.86 >More info 0.88 >More info Control for tissue data median nectaries Original data GEO bulk
15 Leaf 0.87 >More info 0.86 >More info Control for tissue data leaf Original data GEO bulk
16 Petals stage15 0.86 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
17 lateral nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data lateral nectaries Original data GEO bulk
18 Apex 5DAS 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
19 Flowers stage15 0.85 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)
0.84 >More info 0.88 >More info Control for tissue data Original data GEO bulk
21 seed germinating in countinuous light 48 h SL 0.85 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
22 Sepals stage15 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 Root from tip to 130 mm proximal to tip (cut
8dpg)
0.84 >More info 0.88 >More info Control for tissue data Original data GEO bulk
24 Senescing leaf 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
25 Shoot apex vegetative 0.85 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 S17 0.85 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
27 Cauline leaves 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
28 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
29 lec1-1 24h post-fertilization Seed 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
30 Carpels stage15 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 lateral nectary stage 11-12 0.85 >More info 0.86 >More info Control for tissue data lateral nectaries Original data GEO bulk
32 KAN1 0.85 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
33 Shoot apex vegetative &Young leaves 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
34 Mature roots 0.84 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
35 in vivo pollen tube 0.85 >More info 0.86 >More info Control for tissue data pollen tube Original data GEO bulk
36 Proximalhalf (leaf7) 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
38 lec1-1 Cotyledon Stage Seed 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
39 Root from tip to 130 mm proximal to tip (cut
4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
40 Expanding leaf 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
41 WT cotyledons 0.85 >More info 0.86 >More info Control for tissue data cotyledons Original data
42 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
43 Flower (stage12) 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
44 seedling 0.85 >More info 0.86 >More info Control for tissue data seedling Original data GEO bulk
45 unpollinated pistil 0.85 >More info 0.86 >More info Control for tissue data pistil Original data GEO bulk
46 Atape2 low light 0.84 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
47 HDG4 0.84 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
48 HMG 0.85 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
49 flowers 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
50 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
51 torpedo-basal 0.84 >More info 0.87 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
52 Stem 1st node 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
53 Ambient CO2 leaf primordia 0.84 >More info 0.86 >More info Control for tissue data leaf primordia Original data
54 Cotyledons 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
55 Inflorescences ler 0.84 >More info 0.86 >More info Control for tissue data inflorescences Original data GEO bulk
56 Petiol (leaf7) 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
57 flower-buds 0.85 >More info 0.85 >More info Control for tissue data Original data GEO bulk
58 lec1-1 Globular Stage Seed 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
59 LAS 0.84 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
60 ovule 0.84 >More info 0.86 >More info Control for tissue data ovule Original data GEO bulk
61 Distal half (leaf7) 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 Pedicels stage15 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
63 Rosette leaf No12 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
64 Hypocotyl 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
65 Stem 2ndinternode 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
66 ML (Mature leaves) 35DAS 0.86 >More info 0.84 >More info Control for tissue data Original data GEO bulk
67 flower 0.85 >More info 0.85 >More info Control for tissue data flower Original data GEO bulk
68 Seeds stage3 with siliques 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
69 silique 0.85 >More info 0.85 >More info Control for tissue data silique Original data GEO bulk
70 Rosette leaf No2 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
71 Cells whole embryo 0.84 >More info 0.86 >More info Control for tissue data whole embryo Original data
72 Section Root from70 mm to 340 mm harvested
immediately
0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
73 AtHB8 0.84 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
74 Shoot apex transition (before bolting) 0.84 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
75 Ambient CO2 fully expanded leaf 0.85 >More info 0.85 >More info Control for tissue data fully expanded leaf Original data
76 Ambient CO2 expanding leaf 0.85 >More info 0.85 >More info Control for tissue data expanding leaf Original data
77 Bud 0.84 >More info 0.85 >More info Control for tissue data pollen grains and tubes Original data
78 root hair 0.85 >More info 0.84 >More info Control for tissue data root hairs Original data GEO bulk
79 Nuclei suspensor 0.84 >More info 0.85 >More info Control for tissue data suspensor Original data
80 peripheral endosperm mature green 0.84 >More info 0.85 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
81 embryo proper mature green 0.85 >More info 0.84 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
82 cortex 0.84 >More info 0.85 >More info Control for tissue data cortex Original data GEO bulk
83 EL (leaves 1-2) 14DAS 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
84 Stamen stage15 0.85 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
85 leaf 0.85 >More info 0.84 >More info Control for tissue data leaf Original data GEO bulk
86 phloem sieve cells and companion cells 0.84 >More info 0.85 >More info Control for tissue data phloem Original data GEO bulk
87 Nuclei proembryo 0.84 >More info 0.85 >More info Control for tissue data proembryo Original data
88 Apex 14DAS 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
89 micropylar endosperm mature green 0.84 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
90 Anther 0.84 >More info 0.85 >More info Control for tissue data anther Original data
91 whole seeds mature green 0.84 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
92 siliques 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
93 mature endodermis glcal 0.84 >More info 0.84 >More info Control for tissue data endodermis Original data GEO bulk
94 chalazal endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
95 differentiating xylem 0.84 >More info 0.84 >More info Control for tissue data xylem Original data GEO bulk
96 torpedo-meristem 0.84 >More info 0.84 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
97 chalazal seed coat mature green 0.84 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
98 heart-stage-root 0.83 >More info 0.85 >More info Control for tissue data Original data GEO bulk
99 globular-apical 0.83 >More info 0.85 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
100 globular-basal 0.83 >More info 0.85 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
101 heart-stage-cotyledon 0.83 >More info 0.85 >More info Control for tissue data Original data GEO bulk
102 whole seeds 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
103 chalazal seed coat 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
104 embryo proper heart stage 0.81 >More info 0.86 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
105 seed coat mature green 0.84 >More info 0.83 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
106 embryo proper 0.82 >More info 0.85 >More info Control for tissue data Original data GEO bulk
107 micropylar endosperm heart stage 0.81 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
108 torpedo-root 0.83 >More info 0.83 >More info Control for tissue data Original data GEO bulk
109 pollen 0.83 >More info 0.83 >More info Control for tissue data pollen grain Original data GEO bulk
110 peripheral endosperm heart stage 0.82 >More info 0.84 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
111 B5 +AA -0.83 >More info -0.83 >More info B5 -AA B5 media and treated with AA Original data
112 peripherial endosperm 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
113 pericycle control 0.81 >More info 0.84 >More info Control for tissue data mock pericycle Original data GEO bulk
114 chalazal endosperm 0.81 >More info 0.84 >More info Control for tissue data Original data GEO bulk
115 QC 0.81 >More info 0.84 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
116 Mature pollen 0.83 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
117 NAA +AA -0.83 >More info -0.82 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
118 seed coat 0.82 >More info 0.83 >More info Control for tissue data Original data GEO bulk
119 whole seeds heart stage 0.81 >More info 0.83 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
120 seed coat heart stage 0.81 >More info 0.83 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
121 intact root control 0.82 >More info 0.82 >More info Control for tissue data mock whole root Original data GEO bulk
122 chalazal endosperm heart stage 0.81 >More info 0.82 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
123 epidermis control 0.80 >More info 0.83 >More info Control for tissue data mock epidermis Original data GEO bulk
124 in vitro pollen tube 0.82 >More info 0.81 >More info Control for tissue data pollen tube Original data
125 Emwa1 inoculated psk 3 dpi 0.82 >More info 0.80 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
126 pskr1-5 0.82 >More info 0.79 >More info wild type Cotyledons Original data GEO bulk
127 L17 phyA line -0.83 >More info -0.75 >More info WT seedling Original data GEO bulk
128 seed germinating in countinuous light 24h SL 0.86 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 Shoot apex inflorescence (after bolting) 0.84 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 Salicylic Acid 3 h -0.82 >More info -0.65 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
131 chalazal seed coat heart stage 0.82 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 embryo ABA 0.49 >More info 0.67 >More info embryo-control ABA embryo Original data GEO bulk
133 ABA control 0.34 >More info 0.79 >More info No ABA control Original data GEO bulk
134 embryo paclobutrazol 0.49 >More info 0.63 >More info embryo-control paclobutrazol embryo Original data GEO bulk
135 ahg1-1 0.44 >More info 0.67 >More info ABA control Original data GEO bulk
136 clf-28 swn-7 0.46 >More info 0.58 >More info Col whole plant Original data GEO bulk
137 phyABCDE Dark 0.30 >More info 0.71 >More info WT Dark Dark whole seedling Original data GEO bulk
138 Imbibed 24 h ABA 30uM (seed) 0.38 >More info 0.62 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
139 24h SL WT -0.32 >More info -0.67 >More info 0 h WT seed Original data
140 GA4 3 h (ga1 seed) 0.41 >More info 0.57 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
141 fri-flc 0.31 >More info 0.67 >More info WT Original data GEO bulk
142 24h SL Attim 17-1 1 -0.28 >More info -0.67 >More info 0 h Attim 17-1 1 seed Original data
143 gul2-1 mutant 0.36 >More info 0.59 >More info WT 7 day-old whole seedlings Original data
144 Nuclei whole embryo 0.84 >More info 0.10 >More info Control for tissue data whole embryo Original data
145 torpedo-apical 0.83 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
146 gul2-1 bri1-5 mutant 0.36 >More info 0.56 >More info WT 7 day-old whole seedlings Original data
147 ACN1-2 -0.35 >More info -0.56 >More info col-7 Original data GEO bulk
148 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
149 piffq 2d WL 0.22 >More info 0.65 >More info WT 2d WL whole seedling Original data GEO bulk
150 erf104-ko Flg22 4h -0.57 >More info -0.30 >More info erf104-ko H2O 4h Original data GEO bulk
151 columella control 0.81 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
152 rosettes WT drought 0.32 >More info 0.53 >More info rosettes WT watered Original data GEO bulk
153 abi3-6 16 DAF Seed -0.23 >More info -0.61 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
154 rosettes myoox drought 0.30 >More info 0.53 >More info rosettes myoox watered Original data GEO bulk
155 Cs root -0.30 >More info -0.53 >More info control root Original data GEO bulk
156 phyABDE Dark 0.21 >More info 0.62 >More info WT Dark Dark whole seedling Original data GEO bulk
157 ACN1-2 Sucrose -0.24 >More info -0.58 >More info Col-7 Sucrose Original data GEO bulk
158 6 h SL WT -0.28 >More info -0.53 >More info 0 h WT seed Original data
159 red illumination +lincomycin 0.26 >More info 0.54 >More info red illumination -lincomycin Original data GEO bulk
160 6 h SL Attim 17-1 1 -0.25 >More info -0.55 >More info 0 h Attim 17-1 1 seed Original data
161 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
162 Heat shock optimum 0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
163 Starch sheath 2 days NAA 0.52 >More info 0.25 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
164 ged1 seedlings -0.20 >More info -0.57 >More info Ws seedlings Original data GEO bulk
165 Ws seedlings 0.20 >More info 0.57 >More info ged1 seedlings Original data GEO bulk
166 hai1-2 low water potential 0.24 >More info 0.52 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
167 met1-3 fourth-selfed generation -0.20 >More info -0.55 >More info Col WT leaf Original data GEO bulk
168 torpedo-cotyledon 0.83 >More info -0.09 >More info Control for tissue data Original data GEO bulk
169 etiolated atbzip16 0.24 >More info 0.50 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
170 Cocultivation 8 hrs leaf 0.54 >More info 0.16 >More info Mock cocultivation 8 hrs leaf Leaf Original data
171 4xX2x interploidy cross 0.15 >More info 0.54 >More info 2xX2x cross Original data GEO bulk
172 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
173 MPK6 ox Shoot Hypoxia -0.18 >More info -0.50 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
174 ANAC102 knock-out low oxygen -0.13 >More info -0.54 >More info Col-0 low oxygen Original data GEO bulk
175 Leafminer damaged seedlings 0.11 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
176 FarRed Light 45min -0.07 >More info -0.60 >More info White Light 45min Original data Light treatments
177 sng1 0.13 >More info 0.53 >More info WT aerial region Original data GEO bulk
178 Stem tissue 2 days NAA 0.54 >More info 0.11 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
179 whole roots 140 mM NaCl 4 hour 0.14 >More info 0.51 >More info whole roots standard Original data GEO bulk
180 dsr1 -0.07 >More info -0.58 >More info WT mock Whole seedling Original data GEO bulk
181 Col0-PsmES4326-24hpi 0.02 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
182 Laer pretreat GA Flg22 1h -0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
183 NJ15 -0.02 >More info 0.59 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
184 pab polysome -0.00 >More info 0.56 >More info WT polysome seedling shoot/aerial seedling Original data
185 shoots bhlh100/101 100uM Fe -0.03 >More info -0.51 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
186 ABI3GR +DEX +CHX -0.02 >More info 0.54 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
187 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
188 IAA7mII over-expressor IAA Treated -0.27 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk