4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Cotyledons
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Cotyledons"  Help Download transcriptome of top 30
Score Experiment Correlation from
Cotyledons		 Correlation to
Cotyledons		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Cotyledons 1.00 >More info 1.00 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
2 Rosette leaf No2 0.98 >More info 0.98 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
3 Distal half (leaf7) 0.97 >More info 0.98 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
4 Proximalhalf (leaf7) 0.97 >More info 0.97 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
5 Petiol (leaf7) 0.95 >More info 0.96 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
6 Expanding leaf 0.95 >More info 0.96 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
7 Cauline leaves 0.95 >More info 0.96 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
8 Rosette leaf No12 0.94 >More info 0.96 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
9 Ambient CO2 fully expanded leaf 0.94 >More info 0.95 >More info Control for tissue data fully expanded leaf Original data
10 leaf 0.94 >More info 0.94 >More info Control for tissue data leaf Original data GEO bulk
11 Leaf 0.93 >More info 0.94 >More info Control for tissue data leaf Original data GEO bulk
12 Pedicels stage15 0.93 >More info 0.94 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
13 ML (Mature leaves) 35DAS 0.93 >More info 0.94 >More info Control for tissue data Original data GEO bulk
14 seedling 0.93 >More info 0.94 >More info Control for tissue data seedling Original data GEO bulk
15 Ambient CO2 expanding leaf 0.93 >More info 0.94 >More info Control for tissue data expanding leaf Original data
16 Shoot apex vegetative &Young leaves 0.93 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
17 EL (leaves 1-2) 14DAS 0.92 >More info 0.94 >More info Control for tissue data Original data GEO bulk
18 Apex 5DAS 0.92 >More info 0.93 >More info Control for tissue data Original data GEO bulk
19 Stem 1st node 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 Hypocotyl 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
21 Apex 14DAS 0.92 >More info 0.93 >More info Control for tissue data Original data GEO bulk
22 Senescing leaf 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 WT cotyledons 0.92 >More info 0.92 >More info Control for tissue data cotyledons Original data
24 Flowers stage15 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
25 Stem 2ndinternode 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 Sepals stage15 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
27 Shoot apex vegetative 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
28 unpollinated pistil 0.90 >More info 0.92 >More info Control for tissue data pistil Original data GEO bulk
29 seed germinating in countinuous light 48 h SL 0.90 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
30 Seeds stage3 with siliques 0.90 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 silique 0.90 >More info 0.91 >More info Control for tissue data silique Original data GEO bulk
32 Flower (stage12) 0.90 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
33 Ambient CO2 leaf primordia 0.90 >More info 0.90 >More info Control for tissue data leaf primordia Original data
34 Inflorescences ler 0.89 >More info 0.91 >More info Control for tissue data inflorescences Original data GEO bulk
35 Carpels stage15 0.89 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
36 Petals stage15 0.89 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 lateral nectary stage 11-12 0.89 >More info 0.91 >More info Control for tissue data lateral nectaries Original data GEO bulk
38 Shoot apex transition (before bolting) 0.89 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
39 siliques 0.89 >More info 0.91 >More info Control for tissue data Original data GEO bulk
40 flower-buds 0.89 >More info 0.90 >More info Control for tissue data Original data GEO bulk
41 flower 0.89 >More info 0.90 >More info Control for tissue data flower Original data GEO bulk
42 flowers 0.89 >More info 0.90 >More info Control for tissue data Original data GEO bulk
43 cortex 0.87 >More info 0.91 >More info Control for tissue data cortex Original data GEO bulk
44 Mature roots 0.87 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
45 median nectary stage 14-15 0.88 >More info 0.90 >More info Control for tissue data median nectaries Original data GEO bulk
46 B5 +AA -0.90 >More info -0.88 >More info B5 -AA B5 media and treated with AA Original data
47 lateral nectary stage 14-15 0.88 >More info 0.90 >More info Control for tissue data lateral nectaries Original data GEO bulk
48 Bud 0.88 >More info 0.89 >More info Control for tissue data pollen grains and tubes Original data
49 KAN1 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
50 in vivo pollen tube 0.88 >More info 0.89 >More info Control for tissue data pollen tube Original data GEO bulk
51 ovule 0.87 >More info 0.90 >More info Control for tissue data ovule Original data GEO bulk
52 lec1-1 Mature Green Seed 0.88 >More info 0.89 >More info Control for tissue data Original data GEO bulk
53 S17 0.87 >More info 0.90 >More info Control for tissue data shoot apical meristem Original data GEO bulk
54 mature endodermis glcal 0.87 >More info 0.89 >More info Control for tissue data endodermis Original data GEO bulk
55 lec1-1 24h post-fertilization Seed 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
56 Callus 0.87 >More info 0.89 >More info Control for tissue data callus Original data GEO bulk
57 lec1-1 Globular Stage Seed 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
58 Stamen stage15 0.87 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
59 lec1-1 Post-Mature Green Seed 0.88 >More info 0.88 >More info Control for tissue data Original data GEO bulk
60 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
61 Cells whole embryo 0.87 >More info 0.89 >More info Control for tissue data whole embryo Original data
62 seed germinating in countinuous light 12 h SL 0.87 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
63 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.89 >More info Control for tissue data Original data GEO bulk
64 seed germinating in countinuous light 6 h SL 0.86 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
65 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.89 >More info Control for tissue data Original data GEO bulk
66 lec1-1 Cotyledon Stage Seed 0.87 >More info 0.88 >More info Control for tissue data Original data GEO bulk
67 phloem sieve cells and companion cells 0.86 >More info 0.89 >More info Control for tissue data phloem Original data GEO bulk
68 Nuclei proembryo 0.86 >More info 0.89 >More info Control for tissue data proembryo Original data
69 NAA +AA -0.89 >More info -0.86 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
70 Atape2 low light 0.87 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
71 AtHB8 0.86 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
72 Emwa1 inoculated psk 3 dpi 0.89 >More info 0.86 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
73 torpedo-basal 0.87 >More info 0.88 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
74 Seeds stage8 w/o siliques 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
75 LAS 0.86 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
76 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.86 >More info 0.88 >More info Control for tissue data Original data GEO bulk
77 heart-stage-root 0.86 >More info 0.88 >More info Control for tissue data Original data GEO bulk
78 Section Root from70 mm to 340 mm harvested
immediately		 0.85 >More info 0.89 >More info Control for tissue data Original data GEO bulk
79 HDG4 0.86 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
80 HMG 0.86 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
81 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.85 >More info 0.89 >More info Control for tissue data Original data GEO bulk
82 root hair 0.86 >More info 0.87 >More info Control for tissue data root hairs Original data GEO bulk
83 Nuclei suspensor 0.85 >More info 0.88 >More info Control for tissue data suspensor Original data
84 differentiating xylem 0.85 >More info 0.88 >More info Control for tissue data xylem Original data GEO bulk
85 torpedo-meristem 0.86 >More info 0.87 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
86 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
87 Col dryseed 0.86 >More info 0.87 >More info Control for tissue data dry seeds Original data
88 globular-apical 0.86 >More info 0.87 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
89 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
90 Anther 0.86 >More info 0.87 >More info Control for tissue data anther Original data
91 globular-basal 0.86 >More info 0.87 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
92 heart-stage-cotyledon 0.86 >More info 0.87 >More info Control for tissue data Original data GEO bulk
93 seed during stratification 48 h S 0.85 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
94 seed germinating in countinuous light 1 h SL 0.85 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
95 torpedo-root 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
96 seed during stratification 12 h S 0.85 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
97 seed freshly harvested H 0.85 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
98 pskr1-5 0.87 >More info 0.84 >More info wild type Cotyledons Original data GEO bulk
99 Mature pollen 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
100 seed during stratification 1 h S 0.84 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
101 dry seed 0 h 0.84 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
102 whole seeds mature green 0.84 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
103 whole seeds 0.84 >More info 0.84 >More info Control for tissue data Original data GEO bulk
104 pollen 0.84 >More info 0.84 >More info Control for tissue data pollen grain Original data GEO bulk
105 peripheral endosperm heart stage 0.84 >More info 0.84 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
106 QC 0.82 >More info 0.86 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
107 embryo proper 0.83 >More info 0.85 >More info Control for tissue data Original data GEO bulk
108 pericycle control 0.82 >More info 0.85 >More info Control for tissue data mock pericycle Original data GEO bulk
109 embryo proper mature green 0.83 >More info 0.84 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
110 chalazal seed coat mature green 0.83 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
111 whole seeds heart stage 0.83 >More info 0.84 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
112 intact root control 0.83 >More info 0.84 >More info Control for tissue data mock whole root Original data GEO bulk
113 peripheral endosperm mature green 0.83 >More info 0.83 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
114 chalazal endosperm mature green 0.83 >More info 0.83 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
115 chalazal endosperm 0.83 >More info 0.83 >More info Control for tissue data Original data GEO bulk
116 micropylar endosperm heart stage 0.83 >More info 0.83 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
117 peripherial endosperm 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
118 seed coat heart stage 0.82 >More info 0.84 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
119 micropylar endosperm mature green 0.83 >More info 0.83 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
120 embryo proper heart stage 0.83 >More info 0.83 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
121 epidermis control 0.81 >More info 0.84 >More info Control for tissue data mock epidermis Original data GEO bulk
122 chalazal seed coat 0.82 >More info 0.83 >More info Control for tissue data Original data GEO bulk
123 in vitro pollen tube 0.83 >More info 0.82 >More info Control for tissue data pollen tube Original data
124 seed coat mature green 0.83 >More info 0.82 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
125 seed coat 0.82 >More info 0.83 >More info Control for tissue data Original data GEO bulk
126 chalazal endosperm heart stage 0.82 >More info 0.82 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
127 L17 phyA line -0.84 >More info -0.72 >More info WT seedling Original data GEO bulk
128 seed germinating in countinuous light 24h SL 0.88 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 Shoot apex inflorescence (after bolting) 0.89 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 Salicylic Acid 3 h -0.88 >More info -0.41 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
131 erf104-ko Flg22 4h -0.70 >More info -0.50 >More info erf104-ko H2O 4h Original data GEO bulk
132 Col leaf scrape 5 dpi -0.69 >More info -0.49 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
133 chalazal seed coat heart stage 0.81 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
134 bZIP TDNA mutant -0.61 >More info -0.52 >More info Col-WT mature pollen Original data GEO bulk
135 C2H2 ZF TDNA mutant -0.60 >More info -0.51 >More info Col-WT mature pollen Original data GEO bulk
136 WT-elf18 -0.57 >More info -0.48 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
137 mpk6-ko H2O 4h 0.69 >More info 0.34 >More info Col-0 H2O 4h Original data GEO bulk
138 Starch sheath 5 days MS incubation 0.56 >More info 0.45 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
139 tbf1-mock spray -0.61 >More info -0.39 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
140 WT Atum 1h 0.63 >More info 0.36 >More info WT 0h Leaf tissue Original data GEO bulk
141 col-5 DC3000-avrRpm 4h -0.43 >More info -0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
142 torpedo-apical 0.87 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
143 35S::ERF104 H2O 4h 0.67 >More info 0.30 >More info Col-0 H2O 4h Original data GEO bulk
144 tcp13/+ tcp14/+ 0.38 >More info 0.59 >More info WT inflorescences Original data GEO bulk
145 Nuclei whole embryo 0.86 >More info 0.10 >More info Control for tissue data whole embryo Original data
146 erf104-ko H2O 4h 0.66 >More info 0.30 >More info Col-0 H2O 4h Original data GEO bulk
147 sex4-3 0.58 >More info 0.37 >More info Col-WT leaves Original data GEO bulk
148 2h KNO3 Whole root 0.62 >More info 0.33 >More info 2h KCl control Whole root Whole root Original data GEO bulk
149 4C 1h 0.16 >More info 0.78 >More info 4C 0h Original data GEO bulk
150 miR393 0h 0.58 >More info 0.36 >More info WT 0h Leaf tissue Original data GEO bulk
151 Lip0 UV 0.36 >More info 0.58 >More info Lip0 mock UV seedling Original data
152 GA4 3 h (ga1 seed) -0.41 >More info -0.52 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
153 phr1 Shoot-Pi 0.20 >More info 0.70 >More info WT Root-Pi shoots Original data GEO bulk
154 2hr continuous KNO3 ECR cell -0.36 >More info -0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
155 WT Seedling BL 0.27 >More info 0.62 >More info WT Seedling Dark Original data GEO bulk
156 35S:VND7-VP16-GR+CHX -0.29 >More info -0.60 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
157 col-5 hrpA 2h -0.37 >More info -0.51 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
158 tbf1-elf18 0.57 >More info 0.31 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
159 sfr3 cold -0.69 >More info -0.18 >More info WT-cold aerial tissues Original data GEO bulk
160 columella control 0.82 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
161 Starch sheath 2 days NAA 0.62 >More info 0.22 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
162 C2 leaf-drought -0.31 >More info -0.52 >More info C2 leaf-well watered Original data GEO bulk
163 polysome mRNA eif3k 0.58 >More info 0.25 >More info polysome mRNA WT aerial part Original data GEO bulk
164 rosettes myoox drought -0.23 >More info -0.60 >More info rosettes myoox watered Original data GEO bulk
165 Dark 4 h pls RedLight 1min 0.20 >More info 0.61 >More info Dark 4 h Original data Light treatments
166 Differentiation 36h -0.23 >More info -0.58 >More info Differentiation 0h leaves Original data
167 met1-3 fourth-selfed generation -0.25 >More info -0.55 >More info Col WT leaf Original data GEO bulk
168 WT light 0.26 >More info 0.54 >More info WT dark Original data GEO bulk
169 Differentiation 12h -0.25 >More info -0.55 >More info Differentiation 0h leaves Original data
170 rsa3-1 Na 24h 0.17 >More info 0.62 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
171 E.coli TUV86 2 fliC 7h -0.22 >More info -0.57 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
172 Differentiation 48h -0.21 >More info -0.58 >More info Differentiation 0h leaves Original data
173 torpedo-cotyledon 0.87 >More info -0.09 >More info Control for tissue data Original data GEO bulk
174 Laer pretreat GA+JA Flg22 2h -0.27 >More info -0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
175 col-5 DC3000 12h -0.28 >More info -0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
176 Col BTH 0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
177 E.coli 0157 H7 7h -0.21 >More info -0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
178 AFB1 0h 0.54 >More info 0.23 >More info WT 0h Leaf tissue Original data GEO bulk
179 clf-28 swn-7 -0.25 >More info -0.52 >More info Col whole plant Original data GEO bulk
180 cop1 Seedling Dark 0.19 >More info 0.58 >More info WT Seedling Dark Original data GEO bulk
181 HSP90 Reduced RNAi-A3 -0.61 >More info -0.15 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
182 dcl1-7 0.22 >More info 0.54 >More info Ler Original data GEO bulk
183 Cocultivation 8 hrs leaf 0.63 >More info 0.12 >More info Mock cocultivation 8 hrs leaf Leaf Original data
184 bri1-116 0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
185 Heat shock optimum 0.10 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
186 T101D 10mM NH4NO3 -0.19 >More info -0.56 >More info col 10mM NH4NO3 Root Original data
187 T6 leaf-drought -0.19 >More info -0.55 >More info T6 leaf-well watered Original data GEO bulk
188 pad4-PsmES4326-24hpi 0.24 >More info 0.50 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
189 35S:RPS4 rrs1-11 24h 0.20 >More info 0.53 >More info 35S:RPS4 24h leaves Original data
190 Differentiation 24h -0.21 >More info -0.52 >More info Differentiation 0h leaves Original data
191 phr1 phl1 Root-Pi -0.10 >More info -0.62 >More info WT Shoot+Pi roots Original data GEO bulk
192 Botrytis cinerea 48h -0.18 >More info -0.54 >More info control 48h Original data GEO bulk
193 Laer pretreat JA Flg22 0h -0.16 >More info -0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
194 hrpA 7h -0.17 >More info -0.54 >More info Mock 7h hrpA Original data GEO bulk
195 rosettes WT drought -0.21 >More info -0.50 >More info rosettes WT watered Original data GEO bulk
196 NahG -0.12 >More info -0.59 >More info Col-0 Leaves Original data GEO bulk
197 DC3000 2 h (leaf) -0.20 >More info -0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
198 atr zebularine -0.55 >More info -0.14 >More info WT zebularine shoot apical meristem Original data
199 3x(m) 0.05 >More info 0.64 >More info 2x two week old seedlings Original data
200 WT Red light 18h 0.12 >More info 0.57 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
201 Col-0 low oxygen -0.11 >More info -0.54 >More info Col-0 Original data GEO bulk
202 Laer treat paclobutrazol (PAC) -0.12 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
203 opr3 JA 0.5 h 0.13 >More info 0.52 >More info opr3 0 h Original data GEO bulk
204 Atwrky63 -0.09 >More info -0.55 >More info Col0 none leaf Original data GEO bulk
205 phyABCDE Rc50 0.13 >More info 0.50 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
206 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.52 >More info -0.08 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
207 aerial organ callus inducing medium 96 h -0.05 >More info -0.54 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
208 hsfa1 quadruple mutant -0.02 >More info -0.57 >More info WT (Col-0) whole seedling Original data GEO bulk
209 vte2 leaves 0h LT 0.03 >More info 0.55 >More info Col leaves 0h LT h 9-11th adult leaves Original data
210 Mutant sav3-2 (WL) 0.00 >More info 0.58 >More info Col-0 (WL) Original data GEO bulk
211 sav3-2 light 0.00 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
212 35S-MIF1 light grown -0.04 >More info -0.53 >More info Light-grown WT control Original data GEO bulk
213 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.06 >More info 0.51 >More info 2d dark-grown WT seedling Original data GEO bulk
214 35S:RPS4 eds1-2 T0 -0.03 >More info -0.54 >More info 35S:RPS4 T0 leaves Original data
215 WT Atum 2h 0.58 >More info -0.01 >More info WT 0h Leaf tissue Original data GEO bulk
216 35S::IaTCP 0.01 >More info 0.55 >More info thaliana control secondary inflorescence Original data
217 xyl-grown cell culture- 1h 1mM Suc -0.01 >More info -0.54 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
218 ptpks2 0.59 >More info -0.06 >More info Col-WT leaves Original data GEO bulk
219 root longitudinal zone-3 -Fe -0.01 >More info -0.52 >More info root longitudinal zone-3 standard Original data GEO bulk
220 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
221 sim smr1 0.03 >More info -0.54 >More info WT seedling Original data GEO bulk
222 Leafminer damaged seedlings -0.06 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
223 WT NAA 2h 0.54 >More info -0.05 >More info WT 0h Leaf tissue Original data GEO bulk
224 WT NAA 1h 0.50 >More info -0.01 >More info WT 0h Leaf tissue Original data GEO bulk
225 seedling 30 min S Exp 0.02 >More info -0.51 >More info seedling -S Exp seedling Original data
226 IAA7mII over-expressor IAA Treated -0.22 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
227 glk1 glk2 GLK1-GR +DEX 24h 0.05 >More info -0.51 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
228 tcp13 -0.08 >More info 0.54 >More info WT inflorescences Original data GEO bulk
229 TNT-seedlings -0.10 >More info 0.55 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
230 gun1gun5 Norflurazon -0.07 >More info 0.52 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
231 Laer pretreat GA Flg22 1h -0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
232 FAMA induced 4h -0.53 >More info 0.09 >More info control 4h Whole seedling Original data GEO bulk
233 siliques AtHb1 control -0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
234 abi1 hypocotyl -0.07 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
235 Ba1 UV 0.52 >More info -0.13 >More info Ba1 mock UV seedling Original data
236 Col0-PsmES4326-24hpi -0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
237 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.14 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data