4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Dark 4 h pls RedLight 1min
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List of experiments correlated with "Dark 4 h pls RedLight 1min "  Help Download transcriptome of top 30
Score Experiment Correlation from
Dark 4 h pls RedLight 1min 		Correlation to
Dark 4 h pls RedLight 1min 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Dark 4 h pls RedLight 1min 1.00 >More info 1.00 >More info Dark 4 h Original data Light treatments
2 Dark 4 h pls UV-A 5 min 0.96 >More info 0.89 >More info Dark 4 h Original data Light treatments
3 Dark 4 h pls UV-AB 5min 0.90 >More info 0.72 >More info Dark 4 h Original data Light treatments
4 Light 4h steady-state 0.81 >More info 0.74 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
5 WT Red light 18h 0.82 >More info 0.70 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
6 Light 4h polysome-bound 0.81 >More info 0.71 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
7 bri1-116 0.73 >More info 0.73 >More info Col seedling Original data GEO bulk
8 aerial organ callus inducing medium 96 h -0.77 >More info -0.61 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
9 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.79 >More info 0.58 >More info 2d dark-grown WT seedling Original data GEO bulk
10 WT light 0.76 >More info 0.60 >More info WT dark Original data GEO bulk
11 pif4pif5 mut 1h FR 0.81 >More info 0.54 >More info WT 1h FR Original data GEO bulk
12 pif4pif5 mut dark 0.78 >More info 0.56 >More info WT dark Original data GEO bulk
13 Shoot dark control 24h -0.68 >More info -0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
14 Shoot submergence 24h -0.68 >More info -0.65 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
15 WT(Ler) Rc15 0.76 >More info 0.55 >More info WT(Ler) Dark Original data GEO bulk
16 aerial organ callus inducing medium 48 h -0.74 >More info -0.55 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
17 Col-0 C2H4 24h -0.70 >More info -0.59 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
18 WT(Ler) Rc50 0.77 >More info 0.52 >More info WT(Ler) Dark Original data GEO bulk
19 WT Seedling BL 0.76 >More info 0.52 >More info WT Seedling Dark Original data GEO bulk
20 Shoot dark control 7h -0.63 >More info -0.64 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
21 col-5 hrpA 12h -0.69 >More info -0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
22 WT Red light 1h 0.70 >More info 0.57 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
23 WT Rc50 0.77 >More info 0.49 >More info WT Dark red light whole seedling Original data GEO bulk
24 35SpBVR3 -0.73 >More info -0.53 >More info WT Original data GEO bulk
25 ABA control -0.70 >More info -0.53 >More info No ABA control Original data GEO bulk
26 2hr continuous KNO3 ECR cell -0.61 >More info -0.62 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
27 col-5 DC3000 12h -0.68 >More info -0.55 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
28 DC3000 7h -0.69 >More info -0.53 >More info Mock 7h DC3000 Original data GEO bulk
29 Col-0 +lincomycin -0.72 >More info -0.50 >More info Col-0 -lincomycin Original data GEO bulk
30 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.72 >More info 0.49 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
31 phr1 phl1 Root-Pi -0.70 >More info -0.51 >More info WT Shoot+Pi roots Original data GEO bulk
32 phyAphyB Dark -0.75 >More info -0.46 >More info phyB Dark Original data GEO bulk
33 phr1 Shoot-Pi 0.73 >More info 0.47 >More info WT Root-Pi shoots Original data GEO bulk
34 Dark 3day wt -0.72 >More info -0.48 >More info 0h wt Original data
35 phyB Dark 0.75 >More info 0.45 >More info WT(Ler) Dark Original data GEO bulk
36 aerial organ callus inducing medium 12 h -0.67 >More info -0.52 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
37 Dark 3day ivd -0.73 >More info -0.46 >More info 0h ivd Original data
38 Col-0 low oxygen -0.70 >More info -0.49 >More info Col-0 Original data GEO bulk
39 aerial organ callus inducing medium 24h -0.69 >More info -0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
40 Dark 3day hml -0.71 >More info -0.47 >More info 0h hml Original data
41 CabpBVR2 -0.76 >More info -0.42 >More info WT Original data GEO bulk
42 Dark 2day wt -0.71 >More info -0.47 >More info 0h wt Original data
43 phyABDE Rc50 0.68 >More info 0.49 >More info phyABDE Dark red light whole seedling Original data GEO bulk
44 Dark 44min pls RedLigh 1min 0.56 >More info 0.60 >More info Dark 45 min Original data Light treatments
45 etiolated cop1BBX22-GFPox 0.69 >More info 0.46 >More info etiolated Col-0 whole seedlings Original data GEO bulk
46 gun1-1 +lincomycin 0.61 >More info 0.54 >More info Col-0 +lincomycin Original data GEO bulk
47 Dark 2day hml -0.70 >More info -0.45 >More info 0h hml Original data
48 eto1-4 +393 0.75 >More info 0.40 >More info eto1-4 whole seedling Original data GEO bulk
49 eto1-4 -0.74 >More info -0.40 >More info Col-0 whole seedling Original data GEO bulk
50 E.coli TUV86 2 fliC 7h -0.60 >More info -0.52 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
51 E.coli 0157 H7 7h -0.57 >More info -0.54 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
52 2d dark-grown WT(Col-0)/1 hr red light 0.62 >More info 0.48 >More info 2d dark-grown WT seedling Original data GEO bulk
53 erf104-ko Flg22 4h -0.56 >More info -0.54 >More info erf104-ko H2O 4h Original data GEO bulk
54 low CO2 + dark -0.57 >More info -0.53 >More info normal CO2 + light Original data GEO bulk
55 Shoot apex inflorescence (after bolting) 0.45 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 Dark 1day hml -0.68 >More info -0.41 >More info 0h hml Original data
57 T101D 10mM NH4NO3 -0.55 >More info -0.54 >More info col 10mM NH4NO3 Root Original data
58 hrpA 7h -0.57 >More info -0.52 >More info Mock 7h hrpA Original data GEO bulk
59 WT (Col-0) inflorescence drought day 10 -0.65 >More info -0.43 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
60 pad4-PsmES4326-24hpi 0.62 >More info 0.46 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
61 gun1gun5 Norflurazon 0.64 >More info 0.44 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
62 T6 leaf-drought -0.64 >More info -0.44 >More info T6 leaf-well watered Original data GEO bulk
63 clf-28 swn-7 -0.66 >More info -0.42 >More info Col whole plant Original data GEO bulk
64 Dark 1day wt -0.67 >More info -0.41 >More info 0h wt Original data
65 24h light (+Lincomycin) -0.66 >More info -0.42 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
66 cop1 Seedling Dark 0.73 >More info 0.34 >More info WT Seedling Dark Original data GEO bulk
67 eto1-4 +370 0.75 >More info 0.32 >More info eto1-4 whole seedling Original data GEO bulk
68 Day Time Treatment 0.57 >More info 0.50 >More info Day Time Control 1hr white light pulse aerial rosette Original data
69 Dark 1day ivd -0.67 >More info -0.39 >More info 0h ivd Original data
70 Dark 40 min pls UV-A 5 min 0.53 >More info 0.53 >More info Dark 45 min Original data Light treatments
71 efr-1 +elf18 10h 0.56 >More info 0.50 >More info WT +elf18 10h elf18 Original data GEO bulk
72 pif4pif5 mut 24h FR 0.62 >More info 0.44 >More info WT 24h FR Original data GEO bulk
73 Laer pretreat GA+JA Flg22 2h -0.65 >More info -0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
74 Dark 40min pls UV-AB 5min 0.65 >More info 0.41 >More info Dark 45 min Original data Light treatments
75 Laer pretreat GA+JA Flg22 0h -0.65 >More info -0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
76 ahg1-1 -0.66 >More info -0.39 >More info ABA control Original data GEO bulk
77 Dark 6h ivd -0.59 >More info -0.46 >More info 0h ivd Original data
78 agb1 -ABA LF -0.47 >More info -0.58 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
79 Botrytis cinerea 48h -0.63 >More info -0.41 >More info control 48h Original data GEO bulk
80 Col-0 norflurazon -0.67 >More info -0.37 >More info Col-0 control Original data GEO bulk
81 Flagellin 4 h (leaf) -0.52 >More info -0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
82 csn5 (csn5a-2 csn5b) dark 0.73 >More info 0.30 >More info WT dark Original data GEO bulk
83 AvrRpm1 2 h (leaf) -0.50 >More info -0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
84 WT hypoxia -0.58 >More info -0.45 >More info WT normoxia whole rosette Original data
85 Laer Flg22 2h -0.56 >More info -0.47 >More info Laer Control leaf discs Original data GEO bulk
86 afb3-1 2h KNO3 0.62 >More info 0.40 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
87 Seedling KUA1-IOX est -0.51 >More info -0.51 >More info Seedling KUA1-IOX mock Original data
88 Laer pretreat GA+JA Flg22 1h -0.66 >More info -0.36 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 Osmotic Stress 24 h (shoot) -0.58 >More info -0.43 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 erf104-ko H2O 4h 0.63 >More info 0.38 >More info Col-0 H2O 4h Original data GEO bulk
91 hrcC -0.51 >More info -0.49 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
92 tt4 -0.52 >More info -0.48 >More info Col-0 aerial part Original data
93 atmyc2 cop1 Seedling Dark 0.69 >More info 0.30 >More info WT Seedling Dark Original data GEO bulk
94 gul2-1 bri1-5 mutant -0.57 >More info -0.42 >More info WT 7 day-old whole seedlings Original data
95 Laer treat paclobutrazol (PAC) -0.55 >More info -0.44 >More info Laer Control leaf discs Original data GEO bulk
96 GST NPP1 4 h (leaf) -0.48 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
97 csn4-1 mutant 0.70 >More info 0.28 >More info WT dark Original data GEO bulk
98 WT in -N -0.60 >More info -0.38 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
99 IPT8 induced 24h 0.62 >More info 0.36 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
100 TAMM27 roots 2hr KCl control 0.70 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
101 WT flg22 2h -0.55 >More info -0.43 >More info WT 0h Leaf tissue Original data GEO bulk
102 Cor 10h -0.63 >More info -0.35 >More info Mock 10h Cor Original data GEO bulk
103 csn3-1 dark 0.67 >More info 0.31 >More info WT dark Original data GEO bulk
104 seedling 1.5h after HZE atm-1 -0.42 >More info -0.56 >More info seedling day 1 unirradiated atm-1 1.5h Original data
105 Laer pretreat GA Flg22 0h -0.58 >More info -0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
106 GA4 3 h (ga1 seed) -0.68 >More info -0.29 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
107 35S:RPS4 eds1-2 24h 0.52 >More info 0.45 >More info 35S:RPS4 24h leaves Original data
108 petiole in FRD -0.59 >More info -0.38 >More info petiole in WL petioles Original data GEO bulk
109 npr1-PsmES4326-24hpi 0.54 >More info 0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
110 HopZ1a treated -0.55 >More info -0.42 >More info col Original data GEO bulk
111 Col-0 DCA 6d -0.37 >More info -0.60 >More info Col-0 MOCK 6d Original data GEO bulk
112 4h light (+Lincomycin) -0.68 >More info -0.28 >More info 4h light (-Lincomycin) seedlings Original data GEO bulk
113 2hr transitory KNO3 ECR cell -0.54 >More info -0.42 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
114 fri-flc -0.54 >More info -0.42 >More info WT Original data GEO bulk
115 Col whole leaf 5dpi -0.43 >More info -0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
116 gpa1 -ABA GC 0.43 >More info 0.53 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
117 WT (Col-0) inflorescence drought day 5 -0.58 >More info -0.37 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
118 NAA -AA -0.58 >More info -0.37 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
119 gpa1 -ABA LF -0.61 >More info -0.34 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
120 Col 3d -0.66 >More info -0.28 >More info Col CA Leaves Original data
121 ced1 0.56 >More info 0.38 >More info WT PEG 6hr seedlings Original data GEO bulk
122 C2 leaf-drought -0.63 >More info -0.31 >More info C2 leaf-well watered Original data GEO bulk
123 CMP 24hr -0.53 >More info -0.41 >More info Acetone 24hr root Original data GEO bulk
124 35S::ERF104 Flg22 4h -0.44 >More info -0.50 >More info 35S::ERF104 H2O 4h Original data GEO bulk
125 gai Control -0.65 >More info -0.28 >More info Laer Control leaf discs Original data GEO bulk
126 phyABCDE Rc50 0.67 >More info 0.26 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
127 DFPM -0.53 >More info -0.40 >More info control Original data GEO bulk
128 ABA DFPM -0.54 >More info -0.39 >More info control Original data GEO bulk
129 seed germinating in countinuous light 24h SL 0.26 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
130 col-5 DC3000-avrRpm 4h -0.51 >More info -0.42 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
131 axr2-BR 0.67 >More info 0.25 >More info BR BR dark-grown seedlings Original data GEO bulk
132 estradiol induced LEC1 -0.59 >More info -0.33 >More info control Original data GEO bulk
133 Cold Stress 24 h (shoot) -0.58 >More info -0.34 >More info Stress mock 24 h (shoot) Original data Stress treatments
134 Estradiol4 days -0.59 >More info -0.33 >More info Col Original data GEO bulk
135 4d red light grown hmr-5 seedlings -0.42 >More info -0.50 >More info 4d red light grown WT(Col-0) seedlings Original data
136 WT cotyledons 0.64 >More info 0.27 >More info Control for tissue data cotyledons Original data
137 Red Light 4 h -0.38 >More info -0.53 >More info White Light 4 h Original data Light treatments
138 T8 leaf-drought -0.62 >More info -0.29 >More info T8 leaf-well watered Original data GEO bulk
139 WT leaf-drought -0.62 >More info -0.28 >More info WT leaf-well watered Original data GEO bulk
140 Col-0 under 4 days salt -0.51 >More info -0.39 >More info Col-0 under control 4 days salt treatment rosette Original data
141 Rsch 3d -0.55 >More info -0.35 >More info Rsch CA Leaves Original data
142 ptpks2 0.38 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
143 EL (leaves 1-2) 14DAS 0.61 >More info 0.29 >More info Control for tissue data Original data GEO bulk
144 det2 light-dark -0.59 >More info -0.31 >More info det2 light light-dark Original data GEO bulk
145 abi3-6 16 DAF Seed 0.57 >More info 0.33 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
146 Phaseolicola 2 h (leaf) -0.51 >More info -0.38 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
147 Col-0 Root 100 mM ATP 30 min 0.64 >More info 0.25 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
148 Imbibed 24 h ABA 30uM (seed) -0.52 >More info -0.37 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
149 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.64 >More info -0.25 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
150 Control KNO3 roots - 2days 0.52 >More info 0.37 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
151 Uniconazole 12 h -0.36 >More info -0.53 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
152 Pseudomonas -0.31 >More info -0.57 >More info Control pseudomonas treated whole seedling Original data GEO bulk
153 Laer pretreat GA Flg22 2h -0.53 >More info -0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
154 abh1 -ABA -0.20 >More info -0.67 >More info Col-0 -ABA Original data GEO bulk
155 Norflurazon -0.50 >More info -0.37 >More info Col-0 Original data GEO bulk
156 Differentiation 12h -0.64 >More info -0.23 >More info Differentiation 0h leaves Original data
157 leaf 0.61 >More info 0.26 >More info Control for tissue data leaf Original data GEO bulk
158 seedling 0.60 >More info 0.27 >More info Control for tissue data seedling Original data GEO bulk
159 Norflurazon -0.50 >More info -0.37 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
160 flu over-tAPX -0.50 >More info -0.37 >More info WT Col Original data GEO bulk
161 low R/FR JA spray -0.54 >More info -0.32 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
162 35S::RSL4 -0.55 >More info -0.31 >More info Col-0 Control root Original data GEO bulk
163 Dark 6h hml -0.53 >More info -0.33 >More info 0h hml Original data
164 wrky33 Bc inoculation 14h -0.59 >More info -0.27 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
165 Rosette leaf No12 0.63 >More info 0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
166 Ambient CO2 expanding leaf 0.62 >More info 0.24 >More info Control for tissue data expanding leaf Original data
167 abi3-6 12 DAF Seed 0.57 >More info 0.29 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
168 WT (Ler) CK200 0.53 >More info 0.32 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
169 Dark 6h wt -0.52 >More info -0.33 >More info 0h wt Original data
170 HopZ1a treated ulp1c ulp1d -0.50 >More info -0.35 >More info col Original data GEO bulk
171 bZIP TDNA mutant -0.58 >More info -0.27 >More info Col-WT mature pollen Original data GEO bulk
172 CT101 ozone -0.64 >More info -0.20 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
173 ein2-PsmES4326-24hpi 0.56 >More info 0.28 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
174 seedlings protease IV -0.50 >More info -0.34 >More info seedlings nontreated control whole seedling Original data
175 rosettes WT drought -0.53 >More info -0.31 >More info rosettes WT watered Original data GEO bulk
176 embryo paclobutrazol -0.55 >More info -0.29 >More info embryo-control paclobutrazol embryo Original data GEO bulk
177 pskr1-5 0.54 >More info 0.30 >More info wild type Cotyledons Original data GEO bulk
178 MPK6 ox Root Hypoxia 0.55 >More info 0.29 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
179 high-R:FR bud axillary 0.34 >More info 0.50 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
180 ML (Mature leaves) 35DAS 0.60 >More info 0.24 >More info Control for tissue data Original data GEO bulk
181 35S::ERF104 H2O 4h 0.61 >More info 0.23 >More info Col-0 H2O 4h Original data GEO bulk
182 pnp1-1 3h +P -0.53 >More info -0.30 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
183 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.53 >More info -0.30 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
184 root longitudinal zone-1 -Fe -0.52 >More info -0.31 >More info root longitudinal zone-1 standard Original data GEO bulk
185 Emwa1 inoculated psk 3 dpi 0.55 >More info 0.28 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
186 Expanding leaf 0.60 >More info 0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
187 coi1-16 ein2 sid2 ctrl 0.60 >More info 0.23 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
188 WT Bc inoculation 14h -0.50 >More info -0.32 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
189 ckh2 CK200 0.64 >More info 0.18 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
190 Te ozone -0.57 >More info -0.25 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
191 Cotyledons 0.61 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
192 afb3-1 2h KCl 0.54 >More info 0.27 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
193 Proximalhalf (leaf7) 0.61 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
194 PAHs stress -0.52 >More info -0.29 >More info exp control phenanthrene whole plants Original data GEO bulk
195 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.57 >More info -0.24 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
196 Col-0 ozone -0.57 >More info -0.24 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
197 slr-1 0h NAA -0.57 >More info -0.24 >More info Col-0 0h NAA Original data GEO bulk
198 AvrRpt2 Col-0 6hpi -0.51 >More info -0.29 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
199 lec1-1 12 DAF Seed 0.56 >More info 0.24 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
200 WT Root Hypoxia 0.55 >More info 0.25 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
201 Col whole leaf 5 dpi -0.29 >More info -0.51 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
202 Apex 14DAS 0.58 >More info 0.22 >More info Control for tissue data Original data GEO bulk
203 atmospheric CO2 low Mg shoot -0.57 >More info -0.23 >More info atmospheric CO2 normal Mg shoot Shoot Original data
204 Truncated AC2 T2 0.56 >More info 0.23 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
205 0.2µM SMX 0.67 >More info 0.12 >More info control Whole seedling Original data GEO bulk
206 dor drought -0.52 >More info -0.27 >More info WT drought Original data GEO bulk
207 embryo ABA -0.54 >More info -0.25 >More info embryo-control ABA embryo Original data GEO bulk
208 Ambient CO2 fully expanded leaf 0.59 >More info 0.20 >More info Control for tissue data fully expanded leaf Original data
209 Ambient CO2 leaf primordia 0.56 >More info 0.22 >More info Control for tissue data leaf primordia Original data
210 Shoot apex vegetative &Young leaves 0.58 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
211 root control p35S 0.54 >More info 0.24 >More info root control total control root Original data GEO bulk
212 ahg3-1 -0.62 >More info -0.16 >More info ABA control Original data GEO bulk
213 hrpA fliC 7h -0.52 >More info -0.26 >More info Mock 7h hrpA fliC Original data GEO bulk
214 C58 35dpi -0.54 >More info -0.24 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
215 sicy-192 cotyledons -0.58 >More info -0.19 >More info WT cotyledons cotyledons Original data
216 Distal half (leaf7) 0.59 >More info 0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
217 Pedicels stage15 0.58 >More info 0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
218 seedling -S Exp -0.60 >More info -0.17 >More info seedling FN Exp seedling Original data
219 Apex 5DAS 0.57 >More info 0.19 >More info Control for tissue data Original data GEO bulk
220 scrm-D -0.52 >More info -0.24 >More info Col-0 WT whole seedling Original data GEO bulk
221 Petiol (leaf7) 0.58 >More info 0.17 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
222 1h light (+Lincomycin) -0.54 >More info -0.21 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
223 C24 ozone -0.55 >More info -0.20 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
224 Nuclear GSH1 -0.51 >More info -0.24 >More info Cytoplasmic GSH1 Control Original data GEO bulk
225 root hypoxia p35S 0.52 >More info 0.22 >More info root hypoxia total hypoxia root Original data GEO bulk
226 miR393 0h 0.53 >More info 0.21 >More info WT 0h Leaf tissue Original data GEO bulk
227 Salicylic Acid 3 h -0.51 >More info -0.23 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
228 Col leaf scrape 5 dpi -0.56 >More info -0.17 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
229 Mutant lfy-12(shoot apex) 0.56 >More info 0.17 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
230 Laer pretreat JA Flg22 2h -0.56 >More info -0.17 >More info Laer pretreat water control leaf discs Original data GEO bulk
231 mpk6-ko H2O 4h 0.53 >More info 0.20 >More info Col-0 H2O 4h Original data GEO bulk
232 Rosette leaf No2 0.58 >More info 0.15 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
233 tumour -0.50 >More info -0.23 >More info non-tumor tumour Original data GEO bulk
234 IRP1-OE-Ctrl--root -0.52 >More info -0.21 >More info COL-0-Ctrl--root root Original data
235 etiolated cop1 0.69 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
236 low water potential -0.50 >More info -0.23 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
237 TAMM27 roots 2hr KNO3 nitrogen 0.56 >More info 0.16 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
238 ppi2 -0.56 >More info -0.16 >More info WT whole plant Original data GEO bulk
239 Dark 2day ivd -0.71 >More info -0.01 >More info 0h ivd Original data
240 Differentiation 48h -0.60 >More info -0.12 >More info Differentiation 0h leaves Original data
241 Col whole leaf 3dpi -0.22 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
242 Seeds stage3 with siliques 0.54 >More info 0.17 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
243 coi1-16 ein2 sid2 ozone -0.52 >More info -0.19 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
244 Paclobutrazol 12 h -0.20 >More info -0.51 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
245 G3P 0.12 >More info 0.59 >More info Mock distal leaves Original data GEO bulk
246 lec2-1 12 DAF Seed 0.66 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
247 phyABDE 4-day dark- 2 hours Rc50 -0.50 >More info -0.20 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
248 siliques 0.52 >More info 0.18 >More info Control for tissue data Original data GEO bulk
249 WT roots - Fe -0.18 >More info -0.52 >More info WT roots + Fe Roots Original data GEO bulk
250 WT (Col) glucose 0.18 >More info 0.52 >More info WT (Col) glucose seedlings Original data GEO bulk
251 agb1 gpa1 -ABA LF -0.52 >More info -0.17 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
252 high-R:FR bud uppermost 0.17 >More info 0.52 >More info low-R:FR bud uppermost high R rosette axillary bud n Original data GEO bulk
253 abi4-102 -lincomycin -0.50 >More info -0.19 >More info Col-0 -lincomycin Original data GEO bulk
254 ALC Toc1 light-dark EtOH 0.50 >More info 0.19 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
255 Te 1d -0.50 >More info -0.19 >More info Te CA Leaves Original data
256 CLV3p cells -0.51 >More info -0.17 >More info Protoplast Induced Original data GEO bulk
257 AtLysM RLK1 mutant water 0.50 >More info 0.18 >More info WT water Original data GEO bulk
258 Col 8h -0.57 >More info -0.11 >More info Col CA Leaves Original data
259 sfr3 cold -0.56 >More info -0.11 >More info WT-cold aerial tissues Original data GEO bulk
260 AsAKiin11 T2 -0.51 >More info -0.16 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
261 Shoot apex vegetative 0.52 >More info 0.15 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
262 SCL3 OE -0.58 >More info -0.09 >More info Col-0 whole root Original data GEO bulk
263 arr10 arr12 tZ -0.54 >More info -0.12 >More info tZ trans-zeatin roots Original data GEO bulk
264 OsSAP11 expressing 0.51 >More info 0.15 >More info WT seedlings Original data GEO bulk
265 vte1-1 1d vernalization -0.56 >More info -0.10 >More info WT 1d vernalization Original data GEO bulk
266 Differentiation 36h -0.58 >More info -0.08 >More info Differentiation 0h leaves Original data
267 Shoot submergence 7h -0.65 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
268 WT (Col-0) inflorescence moderate drought day 10 -0.50 >More info -0.13 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
269 Stem 1st node 0.52 >More info 0.11 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
270 red illumination +lincomycin -0.52 >More info -0.10 >More info red illumination -lincomycin Original data GEO bulk
271 C2H2 ZF TDNA mutant -0.52 >More info -0.10 >More info Col-WT mature pollen Original data GEO bulk
272 WR 35S 8h BL 0.56 >More info 0.05 >More info WR 35S 0h BL brassinosteroid root Original data
273 Cauline leaves 0.53 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
274 arr10 arr12 -0.58 >More info -0.02 >More info DMSO--WT DMSO roots Original data GEO bulk
275 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
276 sex1-3 0.00 >More info -0.60 >More info Col-WT leaves Original data GEO bulk
277 dorn1-1 Root 100 mM ATP 30 min -0.53 >More info -0.06 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
278 elevated CO2 low Mg shoot 0.54 >More info 0.05 >More info atmospheric CO2 low Mg shoot Shoot Original data
279 Differentiation 24h -0.53 >More info -0.06 >More info Differentiation 0h leaves Original data
280 Col light-dark EtOH -0.52 >More info -0.06 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
281 WT chitooctaose 0.50 >More info 0.08 >More info WT water Original data GEO bulk
282 Stem 2ndinternode 0.50 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
283 light 0.75 >More info -0.18 >More info dark light seedling Original data GEO bulk
284 BR -0.56 >More info -0.01 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
285 atr zebularine -0.55 >More info -0.02 >More info WT zebularine shoot apical meristem Original data
286 Heat shock optimum -0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
287 HairpinZ 4 h (leaf) -0.52 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
288 rosettes atx drought -0.51 >More info -0.03 >More info rosettes atx watered Original data GEO bulk
289 Col-0 DCA 48h 0.50 >More info 0.01 >More info Col-0 MOCK 48h Original data GEO bulk
290 SHR-GR Time 3H Dex 0.53 >More info -0.03 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
291 siliques AtHb1 control -0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
292 15m.KNO3 0.56 >More info -0.10 >More info To. KNO3 14 day old Roots Original data GEO bulk
293 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
294 Var2-1 roots 2hr KNO3 nitrogen 0.53 >More info -0.09 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
295 Col BTH -0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
296 short 17-degree- -0.23 >More info 0.55 >More info control short Original data GEO bulk
297 ckh1 CK200 0.50 >More info -0.23 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
298 Leafminer damaged seedlings -0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
299 Laer pretreat GA Flg22 1h -0.61 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
300 0.5h light (+Lincomycin) -0.54 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
301 Col0-PsmES4326-24hpi -0.60 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk