4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on 15m.KNO3
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "15m.KNO3"  Help Download transcriptome of top 30
Score Experiment Correlation from
15m.KNO3		 Correlation to
15m.KNO3		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 15m.KNO3 1.00 >More info 1.00 >More info To. KNO3 14 day old Roots Original data GEO bulk
2 12m.KNO3 0.89 >More info 0.89 >More info To. KNO3 14 day old Roots Original data GEO bulk
3 20m.KNO3 0.85 >More info 0.85 >More info To. KNO3 14 day old Roots Original data GEO bulk
4 9m.KNO3 0.85 >More info 0.72 >More info To. KNO3 14 day old Roots Original data GEO bulk
5 20m.KCl 0.77 >More info 0.78 >More info To. KCl 14 day old Roots Original data GEO bulk
6 250uM K-nitrate 20min roots 0.69 >More info 0.85 >More info 250uM KCl 20min roots Roots Original data GEO bulk
7 6m.KNO3 0.80 >More info 0.61 >More info To. KNO3 14 day old Roots Original data GEO bulk
8 2hr continuous KNO3 PrR cell 0.71 >More info 0.67 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
9 12m.KCl 0.73 >More info 0.64 >More info To. KCl 14 day old Roots Original data GEO bulk
10 WT Nitrate 0.5h 0.68 >More info 0.67 >More info WT untreated Original data GEO bulk
11 Ws 2h KNO3 0.69 >More info 0.63 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
12 2hr transitory KNO3 PrR cell 0.64 >More info 0.67 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
13 15m.KCl 0.60 >More info 0.66 >More info To. KCl 14 day old Roots Original data GEO bulk
14 2hr continuous KNO3 EPR cell 0.56 >More info 0.63 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
15 2hr continuous KNO3 and MSX PeR cell 0.60 >More info 0.59 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
16 Col 0 2h KNO3 0.62 >More info 0.54 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
17 1.5 hr ammonium 0.69 >More info 0.46 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
18 Split KNO3 roots - 8hours 0.56 >More info 0.58 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
19 6m.KCl 0.62 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
20 250uM KNO3 20min shoots 0.47 >More info 0.67 >More info 250uM KCL 20min shoots shoots Original data GEO bulk
21 3m.KCl 0.57 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
22 AgNO3 3 h 0.53 >More info 0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
23 Split KNO3 roots - 2hours 0.51 >More info 0.54 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
24 1.5 hr nitrate 0.49 >More info 0.56 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
25 2hr transitory KNO3 SR cell 0.60 >More info 0.44 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
26 2h KNO3 Whole root 0.56 >More info 0.45 >More info 2h KCl control Whole root Whole root Original data GEO bulk
27 3m.KNO3 0.54 >More info 0.47 >More info To. KNO3 14 day old Roots Original data GEO bulk
28 8 hr nitrate 0.64 >More info 0.36 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
29 rhd2 0.46 >More info 0.53 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
30 rGRF 0.37 >More info 0.62 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
31 Control KNO3 roots - 8hours 0.50 >More info 0.46 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
32 GO5; 8h switch to ambient CO2 concentrations; 0.55 >More info 0.41 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
33 root - 04% oxygen - 48h -0.27 >More info -0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
34 pmr5 pmr6 0.56 >More info 0.39 >More info Col-0 Original data GEO bulk
35 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
36 Whole root - low pH 30min 0.43 >More info 0.52 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
37 pepr1-1 Pepr2-3 +Pep2 2h -0.62 >More info -0.32 >More info WT +Pep2 2h Pep2 Original data GEO bulk
38 Differentiation 36h -0.40 >More info -0.53 >More info Differentiation 0h leaves Original data
39 4C 1h 0.42 >More info 0.51 >More info 4C 0h Original data GEO bulk
40 Differentiation 48h -0.41 >More info -0.50 >More info Differentiation 0h leaves Original data
41 1 h Light IP RNA -0.54 >More info -0.35 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
42 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
43 SA 4mM 0.26 >More info 0.62 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 2hr continuous KNO3 SR cell 0.54 >More info 0.32 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
45 pmr5 0.50 >More info 0.36 >More info Col-0 Original data GEO bulk
46 HRE1-RNAi20 hypoxia 6 hrs 0.23 >More info 0.63 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
47 shoot hypoxia pRBCS -0.32 >More info -0.53 >More info shoot hypoxia total Original data GEO bulk
48 non-polysome mRNA eif3k -0.29 >More info -0.56 >More info non-polysome mRNA WT aerial part Original data GEO bulk
49 CeO2 germinant -0.30 >More info -0.55 >More info Millipore Water germinant CeO2 seedling Original data
50 sid2-2 9 hpi A. brassicicola 0.57 >More info 0.27 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
51 aba1 hypocotyl 0.52 >More info 0.31 >More info Ler hypocotyl hypocotyl Original data GEO bulk
52 shoot hypoxia p35S -0.16 >More info -0.67 >More info shoot hypoxia total Original data GEO bulk
53 seed germinating in countinuous light 24h SL 0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
54 Roots Cd -0.31 >More info -0.51 >More info Roots control Cd Root Original data GEO bulk
55 Col BTH 0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
56 IMI 4mM 0.50 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
57 xyl-grown cell culture- 1h 1mM Suc -0.15 >More info -0.66 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
58 Laer pretreat GA Flg22 1h 0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
59 Atwrky63 -0.55 >More info -0.25 >More info Col0 none leaf Original data GEO bulk
60 ein2-1 9 hpi A. brassicicola 0.52 >More info 0.28 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 CAX1/CAX3 mutant 0.54 >More info 0.26 >More info Col whole plant Original data GEO bulk
62 NaCl scm -0.18 >More info -0.62 >More info NaCl Col Original data GEO bulk
63 WT Bc inoculation 14h 0.58 >More info 0.22 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
64 MYB46-GR DEX -0.27 >More info -0.52 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
65 root callus inducing medium 96 h -0.52 >More info -0.26 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
66 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
67 AsAKiin11 T1 -0.16 >More info -0.62 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
68 Col ozone 3h 0.24 >More info 0.53 >More info Col clean-air 3h ozone Original data GEO bulk
69 hni9 low nitrogen -0.51 >More info -0.24 >More info WT low nitrogen roots Original data GEO bulk
70 Fenclorim 4hr 0.55 >More info 0.20 >More info Acetone 4hr root Original data GEO bulk
71 root - 04% oxygen - 30min -0.19 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
72 root - 04% oxygen - 2h -0.05 >More info -0.70 >More info root - 21% oxygen - 2h Original data GEO bulk
73 opr3 JA 0.5 h 0.21 >More info 0.54 >More info opr3 0 h Original data GEO bulk
74 2hr transitory KNO3 EPR cell 0.21 >More info 0.54 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
75 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 protoplasts T2 [flg22] 0.23 >More info 0.51 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
77 AFB1 flg22 2h 0.50 >More info 0.23 >More info WT 0h Leaf tissue Original data GEO bulk
78 hrcC 0.52 >More info 0.21 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
79 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.55 >More info 0.17 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
80 shoot control p35S -0.07 >More info -0.65 >More info shoot control total Original data GEO bulk
81 Cs shoot -0.18 >More info -0.53 >More info control shoot Original data GEO bulk
82 Col-0 ozone 0.55 >More info 0.15 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
83 WT NAA/flg 2h 0.53 >More info 0.16 >More info WT 0h Leaf tissue Original data GEO bulk
84 IAA7mII over-expressor IAA Treated 0.00 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
85 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
86 phr1 Shoot-Pi 0.05 >More info 0.62 >More info WT Root-Pi shoots Original data GEO bulk
87 RRE1 -0.52 >More info -0.14 >More info Col C Original data GEO bulk
88 Col-Luc WT 3h antimycin A 0.52 >More info 0.14 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
89 B.cinerea 18 h infection 0.13 >More info 0.51 >More info Mock 18 h Original data Botrytis cinerea infection
90 Botrytis cinerea 18h 0.13 >More info 0.51 >More info control 18h Original data GEO bulk
91 pmr5 0.52 >More info 0.11 >More info Col-0 rosette Original data GEO bulk
92 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
93 gai Control 0.57 >More info 0.05 >More info Laer Control leaf discs Original data GEO bulk
94 wrky33 Bc inoculation 14h 0.56 >More info 0.05 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
95 over-tAPX -0.10 >More info -0.51 >More info WT Col Original data GEO bulk
96 root - 08% oxygen - 30min 0.02 >More info -0.63 >More info root - 21% oxygen - 30min Original data GEO bulk
97 ABA JA 24h 0.01 >More info 0.60 >More info EtOH 24h 24hr Original data GEO bulk
98 shoots WT 0uM Fe 0.50 >More info 0.10 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
99 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.52 >More info 0.08 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
100 35S:VND7-VP16-GR+CHX 0.08 >More info -0.66 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
101 root - 08% oxygen - 2h 0.12 >More info -0.65 >More info root - 21% oxygen - 2h Original data GEO bulk
102 high R/FR SA -0.01 >More info -0.52 >More info high R/FR high R/FR (control) SA spray Original data GEO bulk
103 nia1nia2noa1-2 0.52 >More info 0.00 >More info Col-0 whole seedlings Original data GEO bulk
104 35S::RSL4 0.06 >More info -0.55 >More info Col-0 Control root Original data GEO bulk
105 Dark 4 h pls RedLight 1min -0.10 >More info 0.56 >More info Dark 4 h Original data Light treatments
106 WT roots - Fe 0.54 >More info -0.13 >More info WT roots + Fe Roots Original data GEO bulk
107 shoots bhlh100/101 100uM Fe 0.52 >More info -0.13 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
108 Aerobic e1 ate2 0.19 >More info -0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
109 gpa1-4/agb1-2 ozone 2d 0.20 >More info -0.53 >More info Col ozone 2d ozone Original data GEO bulk
110 CCA1-ox 6am non-polysomal -0.24 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
111 phr1 phl1 Root-Pi 0.32 >More info -0.51 >More info WT Shoot+Pi roots Original data GEO bulk