4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root - 04% oxygen - 30min
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Score Experiment Correlation from
root - 04% oxygen - 30min		 Correlation to
root - 04% oxygen - 30min		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root - 04% oxygen - 30min 1.00 >More info 1.00 >More info root - 21% oxygen - 30min Original data GEO bulk
2 root - 01% oxygen - 30min 0.90 >More info 0.92 >More info root - 21% oxygen - 30min Original data GEO bulk
3 root - 08% oxygen - 30min 0.84 >More info 0.89 >More info root - 21% oxygen - 30min Original data GEO bulk
4 root - 04% oxygen - 2h 0.84 >More info 0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
5 WT Root Hypoxia 0.82 >More info 0.78 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
6 root - 01% oxygen - 2h 0.78 >More info 0.80 >More info root - 21% oxygen - 2h Original data GEO bulk
7 root - 04% oxygen - 48h 0.79 >More info 0.78 >More info root - 21% oxygen - 48h Original data GEO bulk
8 root - 08% oxygen - 2h 0.65 >More info 0.86 >More info root - 21% oxygen - 2h Original data GEO bulk
9 MPK6 ox Root Hypoxia 0.80 >More info 0.67 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
10 MPK6 ox Shoot Hypoxia 0.76 >More info 0.71 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
11 WT Shoot Hypoxia 0.76 >More info 0.71 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
12 root - 08% oxygen - 48h 0.64 >More info 0.80 >More info root - 21% oxygen - 48h Original data GEO bulk
13 Aerobic e1 ate2 0.76 >More info 0.66 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
14 root hypoxia total 0.82 >More info 0.59 >More info root control total Original data GEO bulk
15 Heat Recovery 24 h (shoot) 0.66 >More info 0.72 >More info Stress mock 24 h (shoot) Original data Stress treatments
16 shoot hypoxia total 0.77 >More info 0.61 >More info shoot control total Original data GEO bulk
17 Aerobic prt6 0.71 >More info 0.67 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
18 20m.KCl -0.66 >More info -0.70 >More info To. KCl 14 day old Roots Original data GEO bulk
19 Col-0 wt Hypoxic 0.75 >More info 0.58 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
20 35S:PCO1 hypoxia -0.63 >More info -0.70 >More info WT hypoxia whole rosette Original data
21 roottip hypoxia total 0.74 >More info 0.56 >More info roottip control total Original data GEO bulk
22 9m.KNO3 -0.67 >More info -0.59 >More info To. KNO3 14 day old Roots Original data GEO bulk
23 root - 01% oxygen - 48h 0.70 >More info 0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
24 OE-HRA1 2HS  -0.68 >More info -0.51 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
25 Col-0 2HS 0.79 >More info 0.36 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
26 mdh -0.76 >More info -0.37 >More info Col Original data GEO bulk
27 Cs root -0.70 >More info -0.42 >More info control root Original data GEO bulk
28 bri1-116 0.38 >More info 0.73 >More info Col seedling Original data GEO bulk
29 ckh2 CK25 0.59 >More info 0.49 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
30 mbd11 mutant thaliana 10-day-old seedling 0.70 >More info 0.38 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
31 2 hr Hypoxia Total RNA 0.78 >More info 0.30 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
32 FOX line K16331 0.70 >More info 0.36 >More info empty vector control (T3) FOX lines Original data GEO bulk
33 vtc2 mature somatic embryo 0.67 >More info 0.39 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
34 seed germinating in countinuous light 24h SL 0.38 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
35 pepr1-1 Pepr2-3 untreated 0.62 >More info 0.42 >More info WT untreated untreated Original data GEO bulk
36 3.5h KNO3 Whole root -0.43 >More info -0.61 >More info 3.5h KCl control Whole root Whole root Original data GEO bulk
37 estradiole-induced ANAC059 -0.63 >More info -0.40 >More info transgenic (empty vector inducible system) Original data GEO bulk
38 Nuclear GSH1 -0.60 >More info -0.42 >More info Cytoplasmic GSH1 Control Original data GEO bulk
39 afb3-1 2h KCl -0.73 >More info -0.25 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
40 cngc1-3 0.66 >More info 0.32 >More info Col-0 root Original data GEO bulk
41 seedlings + TSA 0.64 >More info 0.34 >More info control seedlings 10-day old whole seedling Original data GEO bulk
42 cys-c1 root 0.69 >More info 0.28 >More info Root-WT roots Original data GEO bulk
43 phr1 Root-Pi -0.61 >More info -0.36 >More info WT Root+Pi roots Original data GEO bulk
44 Leafminer damaged seedlings 0.41 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
45 siliques AtHb1 control 0.44 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
46 2 hr Hypoxia IP RNA 0.70 >More info 0.25 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
47 WT (Ler) CK200 0.62 >More info 0.33 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
48 iron minus 6 h -0.57 >More info -0.37 >More info iron +6 h root Original data GEO bulk
49 iron minus 24h -0.70 >More info -0.24 >More info iron +24h root Original data GEO bulk
50 seedling -S Exp -0.33 >More info -0.61 >More info seedling FN Exp seedling Original data
51 1.5 hr nitrate 0.65 >More info 0.28 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
52 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
53 1.5 hr ammonium 0.75 >More info 0.18 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
54 JMJ24 knockout 0.61 >More info 0.32 >More info WT Original data GEO bulk
55 PRR5-VP 12h light on -0.62 >More info -0.30 >More info WT 12h light on whole plant Original data GEO bulk
56 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
57 Prohexadione 3 h -0.56 >More info -0.34 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
58 Root GLU1-KO 0.40 >More info 0.50 >More info Root Col(0) roots Original data GEO bulk
59 9 hr Hypoxia Total RNA 0.76 >More info 0.13 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
60 Light 0.69 >More info 0.20 >More info Control Original data GEO bulk
61 cngc1 -0.71 >More info -0.16 >More info Ws-2 Seedlings Original data GEO bulk
62 Col0-PsmES4326-24hpi 0.26 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
63 35S::HRE1 Hypoxic 0.55 >More info 0.31 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
64 FHY3p dark+DEX -0.66 >More info -0.20 >More info FHY3p dark+mock Original data GEO bulk
65 etr1 1% sucrose 12-day-old 0.63 >More info 0.23 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
66 Mutant cry1 -0.65 >More info -0.21 >More info Col-0 Original data GEO bulk
67 cngc19 0.63 >More info 0.23 >More info Col-0 root Original data GEO bulk
68 gun1-9 control 0.64 >More info 0.22 >More info Col-0 control Original data GEO bulk
69 cry1 low light -0.65 >More info -0.21 >More info Col-O low light Original data GEO bulk
70 bZIP1ko mutant N+Light+ 0.57 >More info 0.29 >More info WT-sib N+Light+ whole plant Original data GEO bulk
71 ahg1-1 -0.32 >More info -0.53 >More info ABA control Original data GEO bulk
72 shoot control pRBCS 0.59 >More info 0.26 >More info shoot control total Original data GEO bulk
73 WT +elf18 2h -0.54 >More info -0.30 >More info WT untreated elf18 Original data GEO bulk
74 gun1gun5 Norflurazon 0.64 >More info 0.20 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
75 ckh2 CK0 0.58 >More info 0.26 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
76 bak1-3 untreated 0.58 >More info 0.26 >More info WT untreated untreated Original data GEO bulk
77 axr2-BR 0.59 >More info 0.25 >More info BR BR dark-grown seedlings Original data GEO bulk
78 prt6-1 0.54 >More info 0.29 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
79 spx1 spx2 complete -0.65 >More info -0.18 >More info WT complete seedlings Original data
80 ga1-3/brm-1 0.54 >More info 0.29 >More info wt shoots Original data GEO bulk
81 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.54 >More info -0.29 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
82 Sha-3h IAA -0.67 >More info -0.15 >More info Sha-0h IAA whole plant Original data GEO bulk
83 IRP1-OE-Fe--root -0.52 >More info -0.30 >More info COL-0-Fe--root root Original data
84 Col0 roots 2hr KNO3 nitrogen -0.51 >More info -0.31 >More info Col0 roots 2hr KCl control root Original data GEO bulk
85 RRE2 Chitin 0.67 >More info 0.13 >More info Chitin Original data GEO bulk
86 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.56 >More info -0.24 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
87 Genotoxic Stress 3 h (root) -0.62 >More info -0.18 >More info Stress mock 3 h (root) Original data Stress treatments
88 2hr continuous KNO3 and MSX and Gln PeR cell 0.50 >More info 0.30 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
89 20m.KNO3 -0.54 >More info -0.26 >More info To. KNO3 14 day old Roots Original data GEO bulk
90 ein2 mutant roots mock -0.53 >More info -0.27 >More info roots mock Original data GEO bulk
91 P-chlorophenoxy- isobutyric acid 3 h -0.29 >More info -0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
92 Phytoprostane A1 4 h -0.28 >More info -0.52 >More info Col-0 Original data GEO bulk
93 9 hr Hypoxia IP RNA 0.72 >More info 0.08 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
94 msg2-BR 0.56 >More info 0.23 >More info BR BR dark-grown seedlings Original data GEO bulk
95 Col upon hypoxia 6 hrs 0.82 >More info -0.03 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
96 whole roots 140 mM NaCl 30 minutes 0.54 >More info 0.24 >More info whole roots standard Original data GEO bulk
97 shoot control p35S 0.53 >More info 0.25 >More info shoot control total Original data GEO bulk
98 Sha-1h IAA -0.56 >More info -0.22 >More info Sha-0h IAA whole plant Original data GEO bulk
99 Mutant bri1 0.50 >More info 0.28 >More info Ws-2 Original data Comparison of plant hormone related mutant
100 axr2 0.57 >More info 0.21 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
101 24h +Pi -0.67 >More info -0.10 >More info 24h -Pi root Original data GEO bulk
102 SCL3 OE -0.67 >More info -0.09 >More info Col-0 whole root Original data GEO bulk
103 hypoxic 0.68 >More info 0.08 >More info WT aerobic hypoxia Original data GEO bulk
104 aux1 mutant roots ethylene 0.54 >More info 0.21 >More info roots air Original data GEO bulk
105 15m.KNO3 -0.56 >More info -0.19 >More info To. KNO3 14 day old Roots Original data GEO bulk
106 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.55 >More info 0.20 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
107 ubc13A-es -0.59 >More info -0.16 >More info Col-es root Original data GEO bulk
108 9 hr Hypoxia 1 hr recovery IP RNA 0.70 >More info 0.05 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
109 Mutant iaa5_6_19 0.53 >More info 0.22 >More info Col Original data GEO bulk
110 ckh1 CK25 0.55 >More info 0.20 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
111 abi3-6 12 DAF Seed 0.56 >More info 0.18 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
112 erf5 erf6 0.50 >More info 0.24 >More info WT+water water seedlings Original data GEO bulk
113 siliques WT hypoxia 0.73 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
114 root callus inducing medium 12 h -0.63 >More info -0.10 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
115 INA -0.59 >More info -0.14 >More info CK INA seedling Original data
116 0.2µM SMX -0.59 >More info -0.14 >More info control Whole seedling Original data GEO bulk
117 Bay-0-3h IAA -0.61 >More info -0.11 >More info Bay-0-0h IAA whole plant Original data GEO bulk
118 Stem tissue 5 days NAA 0.62 >More info 0.10 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
119 Mutant hy5 (High Light) -0.53 >More info -0.19 >More info Col-0 (High Light) Original data GEO bulk
120 hy5 high light -0.53 >More info -0.19 >More info Col-O high light Original data GEO bulk
121 TA induced 0.67 >More info 0.04 >More info Methanol TA Suspension cells Original data GEO bulk
122 RRE1 Chitin 0.59 >More info 0.12 >More info Chitin Original data GEO bulk
123 roottip control pSCR -0.14 >More info -0.57 >More info roottip control total control roottip Original data GEO bulk
124 Root dark control 7h -0.50 >More info -0.20 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
125 9 hr Hypoxia 1 hr recovery Total RNA 0.71 >More info -0.01 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
126 gun5 control 0.69 >More info 0.01 >More info Col-0 control Original data GEO bulk
127 IAA7mII over-expressor IAA Treated 0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
128 myb50 xylem 0.56 >More info 0.13 >More info wt xylem xylem Original data GEO bulk
129 dsr1 -0.58 >More info -0.11 >More info WT mock Whole seedling Original data GEO bulk
130 lec2-1 8 DAF Seed 0.52 >More info 0.16 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
131 HSP90 Reduced RNAi-C1 0.57 >More info 0.11 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
132 Dark 0.57 >More info 0.11 >More info Control Original data GEO bulk
133 det2 light-dark -0.61 >More info -0.07 >More info det2 light light-dark Original data GEO bulk
134 Drought Stress 24 h (root) -0.52 >More info -0.15 >More info Stress mock 24 h (root) Original data Stress treatments
135 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
136 Tsu -Fe 24h Roots 0.70 >More info -0.03 >More info Tsu +Fe 24h Roots Original data GEO bulk
137 Tsu-1 -Fe 24h 0.70 >More info -0.03 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
138 Col-0 low oxygen 0.64 >More info 0.01 >More info Col-0 Original data GEO bulk
139 seedling mSPL13 0.55 >More info 0.10 >More info seedling Col-0 Original data GEO bulk
140 root callus inducing medium 24h -0.57 >More info -0.08 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
141 Heat Recovery 24 h (root) -0.05 >More info 0.70 >More info Stress mock 24 h (root) Original data Stress treatments
142 Laer pretreat GA Flg22 1h -0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
143 ckh1 CK0 0.59 >More info 0.05 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
144 elevated CO2 high Mg root -0.62 >More info -0.02 >More info atmospheric CO2 high Mg root Root Original data
145 35S::ZAT12 -0.58 >More info -0.06 >More info gl1 Original data GEO bulk
146 root longitudinal zone-3 low sulfur -0.53 >More info -0.10 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
147 Imbibed 3 h (seed) 0.55 >More info 0.08 >More info Dry seed Original data Time course of early seed germination
148 root longitudinal zone-1 low sulfur -0.55 >More info -0.08 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
149 Mutant ga1-5 0.55 >More info 0.08 >More info Ler-1 Original data Comparison of plant hormone related mutant
150 ALC Toc1 light-light Mock -0.52 >More info -0.10 >More info Col light-light Mock no ethanol Original data GEO bulk
151 ago4-1 0.60 >More info 0.02 >More info WT La-er whole plants Original data GEO bulk
152 8 hr ammonium 0.57 >More info 0.05 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
153 Mutant ap2-6(shoot apex) 0.56 >More info 0.05 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
154 root cells cortex 140mM NaCl 48 hours 0.54 >More info 0.07 >More info root cells cortex standard 1 hour root cells cortex Original data
155 Var2-1 roots 2hr KCl control -0.65 >More info 0.04 >More info Col0 roots 2hr KCl control root Original data GEO bulk
156 Te 3d 0.63 >More info -0.02 >More info Te CA Leaves Original data
157 tt4 UV 0.51 >More info 0.10 >More info UV aerial region Original data GEO bulk
158 toc1-1-77hr 0.50 >More info 0.10 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
159 empty vector IAA Treated -0.57 >More info -0.03 >More info empty vector mock Original data GEO bulk
160 tumour 0.51 >More info 0.09 >More info non-tumor tumour Original data GEO bulk
161 IPT8 induced 12h 0.50 >More info 0.10 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
162 6m.KNO3 -0.58 >More info -0.02 >More info To. KNO3 14 day old Roots Original data GEO bulk
163 20h Col-0 0.03 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
164 IXB induced 0.54 >More info 0.05 >More info Methanol IXB Suspension cells Original data GEO bulk
165 Split KNO3 roots - 8hours 0.07 >More info 0.52 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
166 Col in Pi deficiency medium 0.50 >More info 0.09 >More info Col in control medium root Original data GEO bulk
167 Callus 0.53 >More info 0.05 >More info Control for tissue data callus Original data GEO bulk
168 JA 0.54 >More info 0.04 >More info Col-0 mock Whole seedling Original data GEO bulk
169 elevated CO2 low Mg root -0.55 >More info -0.03 >More info atmospheric CO2 low Mg root Root Original data
170 Col-0 low oxygen 0.70 >More info -0.12 >More info Col-0 control low oxygen root Original data GEO bulk
171 Fei-0-3h IAA -0.50 >More info -0.08 >More info Fei-0-0h IAA whole plant Original data GEO bulk
172 46T-CK -0.59 >More info 0.01 >More info WT-CK none Original data
173 estradiole-induced ANAC092 -0.52 >More info -0.05 >More info transgenic (empty vector inducible system) Original data GEO bulk
174 shoots bhlh100/101 100uM Fe 0.52 >More info 0.05 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
175 mbd4 mutant thaliana 10-day-old seedling 0.58 >More info -0.01 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
176 toc1-1-65hr 0.59 >More info -0.03 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
177 pnp1-1 1wk +P 0.57 >More info -0.01 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
178 ddm1 mutant seedlings -0.59 >More info 0.03 >More info control seedlings 10-day old whole seedling Original data GEO bulk
179 elevated CO2 normal Mg root -0.56 >More info 0.01 >More info atmospheric CO2 normal Mg root Root Original data
180 root cells cortex 140mM NaCl 8 hours 0.50 >More info 0.05 >More info root cells cortex standard 1 hour root cells cortex Original data
181 P.p 2.5hai 0.79 >More info -0.25 >More info At-Control roots Original data GEO bulk
182 atsf1-2 mutant seedling 0.55 >More info -0.01 >More info Col-0 seedling seedlings Original data
183 Pseudomonas 0.57 >More info -0.03 >More info Control pseudomonas treated whole seedling Original data GEO bulk
184 GA3 1 h (ga1) 0.56 >More info -0.03 >More info Mock 1 h (ga1) Original data Basic hormone treatment of seedlings
185 21h-DC3000 hrpA -0.53 >More info 0.01 >More info 21h-DC3000 leaves Original data GEO bulk
186 P35S:rGRF3 0.72 >More info -0.20 >More info WS Original data GEO bulk
187 HSP90 Reduced RNAi-A2 0.50 >More info 0.02 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
188 R. sylvestris submerged 0.50 >More info 0.02 >More info R. sylvestris air Original data GEO bulk
189 MG132 3 h 0.01 >More info -0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
190 hira-root -0.55 >More info 0.04 >More info WT-root root Original data
191 mtf1-1 0.56 >More info -0.05 >More info Col0 root Original data
192 pvip1 pvip2 seedling 0.53 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
193 hira-protoplast -0.56 >More info 0.06 >More info WT-protoplast protoplast Original data
194 Stem+10 mg/g NPA -0.52 >More info 0.02 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
195 250uM K-nitrate 20min roots -0.54 >More info 0.04 >More info 250uM KCl 20min roots Roots Original data GEO bulk
196 Col-O high light 0.61 >More info -0.11 >More info Col-O bule light Original data GEO bulk
197 PRR5-VP 6h light on -0.56 >More info 0.06 >More info WT 6h light on whole plant Original data GEO bulk
198 Kas2 roots 2hr KCl control -0.53 >More info 0.03 >More info Col0 roots 2hr KCl control root Original data GEO bulk
199 ani1 T0.5 -0.06 >More info 0.56 >More info WT T0.5 root tissue Original data GEO bulk
200 gun1gun5 far-red pretreated -0.50 >More info 0.01 >More info WT far-red pretreated Original data GEO bulk
201 SCR-GR Time 12H Dex 0.58 >More info -0.10 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
202 Anoxia 0.51 >More info -0.03 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
203 mutant-line348 0.53 >More info -0.06 >More info WT-control whole plant Original data GEO bulk
204 toc1-1-69hr 0.61 >More info -0.14 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
205 ex2 flu dark 8hours/30 minute light 0.53 >More info -0.07 >More info col dark 8hours/30 minute light Original data GEO bulk
206 -Sulfate 24 h 0.19 >More info -0.65 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
207 Col-0 root drought 0.51 >More info -0.06 >More info Col-0 root water root Original data GEO bulk
208 amiRAP hypoxic -0.59 >More info 0.14 >More info hypoxic hypoxia Original data GEO bulk
209 Atwrky63 -0.52 >More info 0.08 >More info Col0 none leaf Original data GEO bulk
210 mbd6 mutant thaliana 10-day-old seedling 0.50 >More info -0.07 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
211 WT 1wk -P 0.63 >More info -0.20 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
212 Tsu-1 -Fe 48h 0.68 >More info -0.26 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
213 Tsu -Fe 48h Roots 0.68 >More info -0.26 >More info Tsu +Fe 24h Roots Original data GEO bulk
214 csn5 (csn5a-2 csn5b) light 0.51 >More info -0.09 >More info WT light Original data GEO bulk
215 seedlings +5AC 0.50 >More info -0.08 >More info control seedlings 10-day old whole seedling Original data GEO bulk
216 ARR22-ox (t-zeatin 3 h) 0.61 >More info -0.19 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
217 Col 3d 0.53 >More info -0.12 >More info Col CA Leaves Original data
218 TAMM27 roots 2hr KCl control -0.55 >More info 0.14 >More info Col0 roots 2hr KCl control root Original data GEO bulk
219 IRP1-OE-Ctrl--shoot 0.55 >More info -0.14 >More info COL-0-Ctrl--shoot shoot Original data
220 ABA 24h 0.59 >More info -0.18 >More info EtOH 24h 24hr Original data GEO bulk
221 GO5; 0h switch to ambient CO2 concentrations; -0.56 >More info 0.17 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
222 Laer pretreat GA+JA Flg22 0h 0.51 >More info -0.13 >More info Laer pretreat water control leaf discs Original data GEO bulk
223 Mutant iaa5_6_19(IAA) 0.55 >More info -0.17 >More info Col (IAA) Original data GEO bulk
224 GV3101 6dpi 0.55 >More info -0.17 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
225 Blue Light 45 min -0.12 >More info 0.50 >More info White Light 45min Original data Light treatments
226 edr1 18 h powdery mildew 0.53 >More info -0.17 >More info Col-0 18 h powdery mildew Original data GEO bulk
227 tunicamycin -0.15 >More info 0.51 >More info DMF Original data GEO bulk
228 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.55 >More info 0.20 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
229 aerial organ callus inducing medium 96 h 0.55 >More info -0.20 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
230 Mutant axr3-1 (IAA) 0.63 >More info -0.28 >More info Col (IAA) Original data GEO bulk
231 CCA1-ox 6am non-polysomal -0.16 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
232 mutant-line409 0.56 >More info -0.23 >More info WT-control whole plant Original data GEO bulk
233 P.p 6hai 0.68 >More info -0.36 >More info At-Control roots Original data GEO bulk
234 Mutant axr3-1 0.55 >More info -0.23 >More info Col Original data GEO bulk
235 scl3 0.54 >More info -0.23 >More info Col-0 whole root Original data GEO bulk
236 Laer pretreat JA Flg22 0h 0.23 >More info -0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
237 P.p 10.5hai 0.61 >More info -0.34 >More info At-Control roots Original data GEO bulk
238 P.p 30hai 0.52 >More info -0.27 >More info At-Control roots Original data GEO bulk
239 FarRed Light 45min -0.38 >More info 0.62 >More info White Light 45min Original data Light treatments
240 PNO8 3 h 0.53 >More info -0.32 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
241 Col-0 V. longisporum-inoculated 48 hpi 0.37 >More info -0.58 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
242 seedlings-week-old RECA1-overexpressing
transgenic		 0.40 >More info -0.53 >More info seedlings-week-old Col-0 seedlings Original data
243 TNT-seedlings 0.44 >More info -0.57 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
244 CeO2 germinant -0.67 >More info 0.58 >More info Millipore Water germinant CeO2 seedling Original data
245 ani1 T16 -0.62 >More info 0.64 >More info WT T16 root tissue Original data GEO bulk