4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on Fei-0-3h IAA
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "Fei-0-3h IAA"
Download transcriptome of top 30
Score
Experiment
Correlation from
Fei-0-3h IAA
Correlation to
Fei-0-3h IAA
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
Fei-0-3h IAA
1.00
>More info
1.00
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
2
C24-3h IAA
0.86
>More info
0.85
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
3
Col-0-3h IAA
0.87
>More info
0.81
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
4
Fei-0-1h IAA
0.84
>More info
0.84
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
5
BI-1-3h IAA
0.86
>More info
0.81
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
6
IAA 3 h
0.81
>More info
0.83
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
7
Bur-0-3h IAA
0.83
>More info
0.80
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
8
C24-1h IAA
0.81
>More info
0.76
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
9
roots IAA
0.78
>More info
0.79
>More info
roots mock
Original data
GEO bulk
10
IAA 2h
0.71
>More info
0.85
>More info
control 2h
root
Original data
GEO bulk
11
intact root auxin
0.81
>More info
0.74
>More info
intact root control
5 uM indole-3-acetic acid
whole root
Original data
GEO bulk
12
Fei-0-30min IAA
0.74
>More info
0.80
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
13
Bay-0-3h IAA
0.78
>More info
0.71
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
14
Mutant nph4-1 (IAA)
-0.76
>More info
-0.72
>More info
Col (IAA)
Original data
GEO bulk
15
Chemically
0.71
>More info
0.77
>More info
Solvent
treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid
whole seedlings
Original data
16
Sha-3h IAA
0.78
>More info
0.69
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
17
Mutant nph4-1_arf19-1 (IAA)
-0.77
>More info
-0.70
>More info
Col (IAA)
Original data
GEO bulk
18
IAA 1 h
0.65
>More info
0.77
>More info
Mock 1 h
Original data
Basic hormone treatment of seedlings
19
WT seedlings IAA
0.60
>More info
0.81
>More info
WT seedlings control
Seedlings
Original data
GEO bulk
20
Sha-1h IAA
0.72
>More info
0.69
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
21
Col-0 6h NAA
0.71
>More info
0.70
>More info
Col-0 6h MOCK
Original data
GEO bulk
22
Col-0-1h IAA
0.78
>More info
0.62
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
23
IAA 4h
0.71
>More info
0.69
>More info
control 4h
root
Original data
GEO bulk
24
Col-0 2h NAA
0.69
>More info
0.70
>More info
Col-0 6h MOCK
Original data
GEO bulk
25
Bur-0-1h IAA
0.73
>More info
0.63
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
26
BI-1-1h IAA
0.73
>More info
0.62
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
27
aux1 mutant roots air
-0.68
>More info
-0.67
>More info
roots IAA
Original data
GEO bulk
28
IAA Treated
0.68
>More info
0.67
>More info
Negative Control
Original data
GEO bulk
29
Bay-0-1h IAA
0.68
>More info
0.66
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
30
NAA 6h
0.69
>More info
0.65
>More info
before treatment
NAA
root
Original data
GEO bulk
31
IAA 0.5h
0.60
>More info
0.73
>More info
control 0.5h
root
Original data
GEO bulk
32
IAA 8h
0.68
>More info
0.62
>More info
control 8h
root
Original data
GEO bulk
33
IAA 1h
0.55
>More info
0.75
>More info
control 1h
root
Original data
GEO bulk
34
aerial organ callus inducing medium 24h
0.59
>More info
0.65
>More info
aerial organ callus inducing medium 0 h
24 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
35
aerial organ callus inducing medium 12 h
0.55
>More info
0.68
>More info
aerial organ callus inducing medium 0 h
12 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
36
NAA 3h
0.64
>More info
0.57
>More info
before treatment
NAA
root
Original data
GEO bulk
37
pericycle auxin
0.60
>More info
0.61
>More info
pericycle control
5 uM indole-3-acetic acid
pericycle
Original data
GEO bulk
38
C24-30min IAA
0.64
>More info
0.56
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
39
slr-1 6h NAA
-0.60
>More info
-0.58
>More info
Col-0 6h NAA
Original data
GEO bulk
40
IAA 12h
0.60
>More info
0.57
>More info
control 12h
root
Original data
GEO bulk
41
aerial organ callus inducing medium 48 h
0.58
>More info
0.58
>More info
aerial organ callus inducing medium 0 h
48 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
42
Mutant iaa5_6_19(IAA)
0.65
>More info
0.50
>More info
Col (IAA)
Original data
GEO bulk
43
NAA -AA
0.64
>More info
0.51
>More info
B5 -AA
B5 media supplemented with 4.5 µM NAA and untreated
Original data
44
Mutant iaa5_6_19
-0.75
>More info
-0.40
>More info
Col
Original data
GEO bulk
45
root callus inducing medium 24h
0.65
>More info
0.48
>More info
root callus inducing medium 0 h
24 hours after incubating on callus inducing medium
root explants
Original data
GEO bulk
46
Bur-0-30min IAA
0.59
>More info
0.54
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
47
IAA 0.5 h
0.49
>More info
0.64
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
48
auxin and brassinazole seedlings
-0.65
>More info
-0.47
>More info
auxin seedlings
Original data
GEO bulk
49
Mutant iaa17-6 (IAA)
0.75
>More info
0.36
>More info
Col (IAA)
Original data
GEO bulk
50
IAA 24h
0.56
>More info
0.54
>More info
control 24h
root
Original data
GEO bulk
51
columella auxin
0.57
>More info
0.52
>More info
columella control
5 uM indole-3-acetic acid
columella
Original data
GEO bulk
52
Sha-30min IAA
0.50
>More info
0.59
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
53
Col-0-30min IAA
0.59
>More info
0.48
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
54
empty vector IAA Treated
0.47
>More info
0.60
>More info
empty vector mock
Original data
GEO bulk
55
Mutant iaa17-6
-0.72
>More info
-0.33
>More info
Col
Original data
GEO bulk
56
8hr-pH4.5
0.53
>More info
0.51
>More info
8hr-pH6
8hr pH 4.5
roots
Original data
GEO bulk
57
root callus inducing medium 48 h
0.63
>More info
0.41
>More info
root callus inducing medium 0 h
48 hours after incubating on callus inducing medium
root explants
Original data
GEO bulk
58
slr-1 2h NAA
-0.50
>More info
-0.53
>More info
Col-0 2h NAA
Original data
GEO bulk
59
Mutant arf2-6 (IAA)
0.62
>More info
0.39
>More info
Col (IAA)
Original data
GEO bulk
60
epidermis auxin
0.53
>More info
0.48
>More info
epidermis control
5 uM indole-3-acetic acid
epidermis
Original data
GEO bulk
61
aerial organ callus inducing medium 96 h
0.52
>More info
0.49
>More info
aerial organ callus inducing medium 0 h
96 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
62
dicamba
0.57
>More info
0.43
>More info
WT mock
whole seedling
Original data
GEO bulk
63
root callus inducing medium 12 h
0.60
>More info
0.39
>More info
root callus inducing medium 0 h
12 hours after incubating on callus inducing medium
root explants
Original data
GEO bulk
64
root callus inducing medium 96 h
0.61
>More info
0.38
>More info
root callus inducing medium 0 h
96 hours after incubating on callus inducing medium
root explants
Original data
GEO bulk
65
Bay-0-30min IAA
0.47
>More info
0.52
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
66
BI-1-30min IAA
0.55
>More info
0.43
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
67
stele auxin
0.53
>More info
0.45
>More info
stele control
5 uM indole-3-acetic acid
stele
Original data
GEO bulk
68
Whole root - low pH 12H
0.45
>More info
0.53
>More info
Whole root - Std pH 12H
pH 4.6 for 12 hr
Original data
GEO bulk
69
GR-bdl DEX IAA
-0.47
>More info
-0.50
>More info
GR-bdl IAA
Original data
GEO bulk
70
Mutant arf19-1 (IAA)
-0.52
>More info
-0.44
>More info
Col (IAA)
Original data
GEO bulk
71
Whole root - low pH 3H
0.40
>More info
0.55
>More info
Whole root - Std pH 3H
pH 4.6 for 3 hr
Original data
GEO bulk
72
R. solani AG8
0.50
>More info
0.44
>More info
control
Rhizoctonia solani AG8
whole seedling
Original data
GEO bulk
73
WT cold 24h
0.37
>More info
0.56
>More info
WT cold 0h
cold at 4°C
seedlings
Original data
GEO bulk
74
ABA control
0.27
>More info
0.66
>More info
No ABA control
Original data
GEO bulk
75
Whole root - low pH 24H
0.50
>More info
0.43
>More info
Whole root - Std pH 24H
pH 4.6 for 24 hr
Original data
GEO bulk
76
Wounding Stress3 h (root)
-0.37
>More info
-0.55
>More info
Stress mock 3 h (root)
Original data
Stress treatments
77
oligomycin 4 h
0.50
>More info
0.42
>More info
mock 4 h
4 h_oligo
seedling culture
Original data
GEO bulk
78
WT NAA 2h
0.21
>More info
0.71
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
79
5-Triiodobenzoic acid3 h
0.53
>More info
0.38
>More info
Mock 3 h
Original data
Effect of auxin inhibitors on seedlings
80
Imbibed 24 h ABA 30uM (seed)
0.39
>More info
0.51
>More info
Imbibed 24 h (seed)
Original data
Effect of ABA during seed imbibition
81
Col in Pi deficiency medium
0.27
>More info
0.60
>More info
Col in control medium
root
Original data
GEO bulk
82
Heat shock optimum
0.22
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
83
Whole root - low pH 1H
0.30
>More info
0.53
>More info
Whole root - Std pH 1H
pH 4.6 for 1 hr
Original data
GEO bulk
84
Laer pretreat GA Flg22 1h
0.12
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
85
Col-0 low R/FR
0.29
>More info
0.53
>More info
Col-0 high R/FR
low R/FR
seedlings
Original data
GEO bulk
86
Leafminer damaged seedlings
0.24
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
87
cpr5npr1svi1
0.23
>More info
0.57
>More info
WT(COL)
Original data
GEO bulk
88
root - 04% oxygen - 2h
-0.11
>More info
-0.68
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
89
Col0-PsmES4326-24hpi
0.18
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
90
low R/FR mock spray
0.15
>More info
0.63
>More info
high R/FR mock spray
low R/FR mock spray
Original data
GEO bulk
91
6-trichlorophenoxyacetic acid 3 h
0.50
>More info
0.24
>More info
Mock 3 h
Original data
Effect of auxin inhibitors on seedlings
92
frb1 mutant
0.18
>More info
0.56
>More info
WT
whole seedling
Original data
GEO bulk
93
sta1
0.23
>More info
0.51
>More info
WT
Original data
GEO bulk
94
Col-0 shade
0.18
>More info
0.56
>More info
Col-0 light
seedlings
Original data
GEO bulk
95
bri1-116
0.00
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
96
WT Red light 18h
-0.19
>More info
-0.54
>More info
WT Dark 18h
deetiolated seedling
Original data
GEO bulk
97
low R/FR JA spray
0.16
>More info
0.56
>More info
high R/FR JA spray
low R/FR JA spray
Original data
GEO bulk
98
WT Shoot Hypoxia
-0.18
>More info
-0.54
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
99
Red Light 4 h
0.20
>More info
0.51
>More info
White Light 4 h
Original data
Light treatments
100
35S::PI ap3-3 35S::AP-GR +DEX
0.18
>More info
0.53
>More info
0hr DEX
Original data
GEO bulk
101
Cs root
-0.17
>More info
-0.52
>More info
control root
Original data
GEO bulk
102
08h Col-0
0.17
>More info
0.50
>More info
00h Col-0
Original data
GEO bulk
103
16h Col-0
0.08
>More info
0.57
>More info
00h Col-0
Original data
GEO bulk
104
Mutant arf2-6
-0.64
>More info
-0.00
>More info
Col
Original data
GEO bulk
105
Col BTH
-0.04
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
106
Col-0 0h NAA
0.12
>More info
0.50
>More info
Col-0 6h MOCK
Original data
GEO bulk
107
cat2-2; 8h switch to ambient CO2 concentrations;
0.01
>More info
0.61
>More info
WT; 8h switch to ambient CO2 concentrations;
2 whole rosettes
Original data
108
root - 08% oxygen - 2h
-0.05
>More info
-0.55
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
109
root - 04% oxygen - 30min
-0.08
>More info
-0.50
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
110
WT Atum 1h
-0.04
>More info
-0.53
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
111
Shoot apex inflorescence (after bolting)
-0.09
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
112
seed germinating in countinuous light 24h SL
-0.14
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
113
toc1-1-89hr
-0.01
>More info
-0.51
>More info
WT-untreated-89hr
none
seedlings aerial tissue
Original data
GEO bulk
114
CCA1-ox 6am non-polysomal
0.01
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
115
sex1-3
-0.04
>More info
0.50
>More info
Col-WT
leaves
Original data
GEO bulk
116
siliques AtHb1 control
-0.11
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
117
cca1-lhy 30m light
-0.19
>More info
0.50
>More info
30m light
whole seedlings
Original data
GEO bulk
118
IAA7mII over-expressor IAA Treated
-0.39
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk