4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on low R/FR JA spray
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List of experiments correlated with "low R/FR JA spray"  Help Download transcriptome of top 30
Score Experiment Correlation from
low R/FR JA spray		 Correlation to
low R/FR JA spray		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 low R/FR JA spray 1.00 >More info 1.00 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
2 low R/FR mock spray 0.91 >More info 0.92 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
3 petiole in FRD 0.87 >More info 0.73 >More info petiole in WL petioles Original data GEO bulk
4 Col-0 shade 0.77 >More info 0.75 >More info Col-0 light seedlings Original data GEO bulk
5 Col-0 low R/FR 0.73 >More info 0.77 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
6 IAA 1 h 0.64 >More info 0.79 >More info Mock 1 h Original data Basic hormone treatment of seedlings
7 WT hypoxia 0.80 >More info 0.62 >More info WT normoxia whole rosette Original data
8 leaf blade in FRD 0.71 >More info 0.61 >More info leaf blade in WL leaf blades Original data GEO bulk
9 aerial organ callus inducing medium 12 h 0.69 >More info 0.60 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
10 IAA 3 h 0.70 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
11 shl-2 Pool 0.58 >More info 0.65 >More info Ler Pool seedling Original data GEO bulk
12 GR-bdl DEX IAA -0.58 >More info -0.65 >More info GR-bdl IAA Original data GEO bulk
13 Shoot dark control 7h 0.67 >More info 0.55 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
14 Light 4h polysome-bound -0.61 >More info -0.61 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
15 WT Red light 18h -0.59 >More info -0.61 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
16 Light 4h steady-state -0.58 >More info -0.62 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
17 Shoot submergence 24h 0.62 >More info 0.57 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
18 Mutant nph4-1_arf19-1 (IAA) -0.64 >More info -0.54 >More info Col (IAA) Original data GEO bulk
19 aerial organ callus inducing medium 24h 0.61 >More info 0.56 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
20 IAA Treated 0.56 >More info 0.61 >More info Negative Control Original data GEO bulk
21 pif5 high R/FR -0.52 >More info -0.64 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
22 piffq FR 3h -0.60 >More info -0.55 >More info WT FR 3h whole seedling Original data GEO bulk
23 high R/FR JA spray -0.45 >More info -0.69 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
24 PIF5ox low R/FR -0.66 >More info -0.47 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
25 MYB12OX/tt4 0.59 >More info 0.54 >More info Col-0 aerial part Original data
26 Mutant nph4-1 (IAA) -0.61 >More info -0.52 >More info Col (IAA) Original data GEO bulk
27 WOX1-1 0.61 >More info 0.52 >More info Col-0 aerial part Original data
28 aerial organ callus inducing medium 48 h 0.56 >More info 0.57 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
29 2d dark-grown WT(Col-0)/1 hr red light -0.59 >More info -0.53 >More info 2d dark-grown WT seedling Original data GEO bulk
30 +1.6 mM Tween 20 1 h. 0.51 >More info 0.61 >More info +distilled water 1 h. Original data GEO bulk
31 WT NAA 2h 0.50 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
32 Fei-0-1h IAA 0.65 >More info 0.45 >More info Fei-0-0h IAA whole plant Original data GEO bulk
33 mutant acs9B (single mutant) 0.60 >More info 0.48 >More info col control (single mutant) Original data GEO bulk
34 aerial organ callus inducing medium 96 h 0.51 >More info 0.57 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
35 Light 0.5h steady-state -0.45 >More info -0.63 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
36 tt4 0.56 >More info 0.51 >More info Col-0 aerial part Original data
37 Shoot dark control 24h 0.58 >More info 0.49 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
38 pif4pif5 mut 24h FR -0.48 >More info -0.59 >More info WT 24h FR Original data GEO bulk
39 WT(Ler) Rc15 -0.51 >More info -0.55 >More info WT(Ler) Dark Original data GEO bulk
40 Dark 44min pls RedLigh 1min -0.53 >More info -0.53 >More info Dark 45 min Original data Light treatments
41 Col-0-1h IAA 0.65 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
42 WT Red light 1h -0.51 >More info -0.54 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
43 FarRed Light 45min 0.39 >More info 0.66 >More info White Light 45min Original data Light treatments
44 Bay-0-1h IAA 0.51 >More info 0.53 >More info Bay-0-0h IAA whole plant Original data GEO bulk
45 npr1 sni1 SA 0.60 >More info 0.44 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
46 C24-3h IAA 0.67 >More info 0.36 >More info C24-0h IAA whole plant Original data GEO bulk
47 WT(Ler) Rc50 -0.50 >More info -0.53 >More info WT(Ler) Dark Original data GEO bulk
48 Day Time Treatment -0.58 >More info -0.44 >More info Day Time Control 1hr white light pulse aerial rosette Original data
49 IAA 0.5 h 0.50 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
50 BI-1-1h IAA 0.59 >More info 0.42 >More info BI-1-0h IAA whole plant Original data GEO bulk
51 Mutant arf2-6 -0.57 >More info -0.44 >More info Col Original data GEO bulk
52 C24-1h IAA 0.68 >More info 0.33 >More info C24-0h IAA whole plant Original data GEO bulk
53 Bur-0-1h IAA 0.60 >More info 0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
54 Bay-0-3h IAA 0.55 >More info 0.45 >More info Bay-0-0h IAA whole plant Original data GEO bulk
55 ein2 1% sucrose 14-day-old -0.44 >More info -0.56 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
56 M6PR transgenic leaf 0mM NaCl 0.49 >More info 0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
57 myb21 myb24 stage2 -0.50 >More info -0.49 >More info WT stage2 Original data GEO bulk
58 Red/FR Light 4 h 0.42 >More info 0.57 >More info FarRed Light 4 h Original data Light treatments
59 WT Rc50 -0.49 >More info -0.50 >More info WT Dark red light whole seedling Original data GEO bulk
60 CCA14 dark late 0.63 >More info 0.35 >More info Col dark late Original data GEO bulk
61 pap1-D 0.54 >More info 0.44 >More info Col-0 aerial part Original data
62 Laer pretreat GA Flg22 1h 0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
63 1 h Light Total RNA -0.44 >More info -0.54 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
64 pap1-D/tt4 0.51 >More info 0.46 >More info Col-0 aerial part Original data
65 AVG 3 h -0.43 >More info -0.54 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
66 Red Light 45min 0.33 >More info 0.64 >More info White Light 45min Original data Light treatments
67 35S:LOB-GR DEX -0.58 >More info -0.38 >More info Col DEX dexamethasone seedling Original data GEO bulk
68 rosette leaves fdh 0.53 >More info 0.43 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
69 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.51 >More info -0.45 >More info 2d dark-grown WT seedling Original data GEO bulk
70 Light 0.5h polysome-bound -0.44 >More info -0.52 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
71 Sha-1h IAA 0.55 >More info 0.40 >More info Sha-0h IAA whole plant Original data GEO bulk
72 Col-0 Mock Shade 0.66 >More info 0.29 >More info Col-0 Mock WL seedlings Original data
73 Col-0 DEX Shade 0.62 >More info 0.33 >More info Col-0 DEX WL seedlings Original data
74 FarRed Light 4 h -0.33 >More info -0.62 >More info White Light 4 h Original data Light treatments
75 mkk2 24h BTH rep 0.53 >More info 0.41 >More info Col-0 24h BTH rep Original data GEO bulk
76 Dark 40 min pls UV-A 5 min -0.50 >More info -0.44 >More info Dark 45 min Original data Light treatments
77 downy mildew cotyledons early stage -0.61 >More info -0.33 >More info mock inoculated Cotyledons Original data GEO bulk
78 Nicotinamide-69hr 0.51 >More info 0.43 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
79 Flagellin 4 h (leaf) 0.44 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
80 dTLEc systemic wounding 0.32 >More info 0.61 >More info wt systemic wounding leaves Original data GEO bulk
81 WT NAA 1h 0.50 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
82 sfr2 control -0.50 >More info -0.42 >More info WT control All aerial tissue Original data GEO bulk
83 tunicamycin -0.38 >More info -0.53 >More info DMF Original data GEO bulk
84 E.coli 0157 H7 7h 0.34 >More info 0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
85 petiole in D 0.51 >More info 0.39 >More info petiole in WL petioles Original data GEO bulk
86 ANAC102 knock-out 0.24 >More info 0.66 >More info Col-0 Original data GEO bulk
87 INA 0.40 >More info 0.50 >More info CK INA seedling Original data
88 mbd6 mutant thaliana 10-day-old seedling 0.54 >More info 0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
89 seedlings protease IV 0.51 >More info 0.38 >More info seedlings nontreated control whole seedling Original data
90 eds16 whole leaf 1dpi -0.37 >More info -0.52 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
91 Col BTH 0.22 >More info 0.67 >More info Col rosettes Original data GEO bulk
92 piffq FR 1h -0.51 >More info -0.37 >More info WT FR 1h whole seedling Original data GEO bulk
93 high R/FR -0.71 >More info -0.17 >More info low R/FR high R/FR (control) mock spray Original data GEO bulk
94 mkk1 24h BTH rep 0.51 >More info 0.37 >More info Col-0 24h BTH rep Original data GEO bulk
95 mkk2 control rep 0.50 >More info 0.38 >More info Col-0 Time 0 rep Original data GEO bulk
96 gpa1 -ABA LF 0.37 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
97 myb21 myb24 stage3 -0.53 >More info -0.34 >More info WT stage3 Original data GEO bulk
98 upf2i -0.32 >More info -0.55 >More info WT whole plant Original data GEO bulk
99 Mutant iaa5_6_19 -0.52 >More info -0.35 >More info Col Original data GEO bulk
100 eds16 whole leaf 0h UI -0.36 >More info -0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
101 Heat shock optimum 0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
102 Dark 4 h pls RedLight 1min -0.32 >More info -0.54 >More info Dark 4 h Original data Light treatments
103 arf6 arf8 stage3 -0.51 >More info -0.35 >More info WT stage3 Original data GEO bulk
104 Dark 6h ivd 0.51 >More info 0.33 >More info 0h ivd Original data
105 sfr3 cold 0.32 >More info 0.52 >More info WT-cold aerial tissues Original data GEO bulk
106 Col-0-3h IAA 0.56 >More info 0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
107 Bur-0-3h IAA 0.52 >More info 0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
108 Leafminer damaged seedlings 0.27 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
109 IRP1-OE-Ctrl--shoot -0.58 >More info -0.25 >More info COL-0-Ctrl--shoot shoot Original data
110 C58 3hpi 0.51 >More info 0.30 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
111 total mRNA eif3k 0.22 >More info 0.58 >More info total mRNA WT aerial part Original data GEO bulk
112 intact root auxin 0.55 >More info 0.24 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
113 Col-O low light -0.52 >More info -0.27 >More info Col-O bule light Original data GEO bulk
114 camta1-2 0.50 >More info 0.29 >More info Col-0-WT Original data GEO bulk
115 DC3000 hrcC 2 h (leaf) 0.50 >More info 0.29 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
116 Col0-PsmES4326-24hpi 0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
117 Blue Light 4 h -0.24 >More info -0.53 >More info White Light 4 h Original data Light treatments
118 DC3000 24h -0.24 >More info -0.53 >More info Mock 24h DC3000 Original data GEO bulk
119 Chemically 0.52 >More info 0.24 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
120 Laer GA 2h -0.25 >More info -0.51 >More info Laer Control leaf discs Original data GEO bulk
121 dde2-2 9 hpi A. brassicicola 0.51 >More info 0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
122 Dark 6h hml 0.51 >More info 0.22 >More info 0h hml Original data
123 C24-30min IAA 0.51 >More info 0.22 >More info C24-0h IAA whole plant Original data GEO bulk
124 Fei-0-3h IAA 0.56 >More info 0.16 >More info Fei-0-0h IAA whole plant Original data GEO bulk
125 AtLysM RLK1 mutant water -0.51 >More info -0.21 >More info WT water Original data GEO bulk
126 Methyl Jasmonate 3 h -0.17 >More info -0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
127 Dark 6h wt 0.53 >More info 0.17 >More info 0h wt Original data
128 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
129 G3P -0.53 >More info -0.16 >More info Mock distal leaves Original data GEO bulk
130 light -0.51 >More info -0.18 >More info dark light seedling Original data GEO bulk
131 eds16 whole leaf 5dpi -0.15 >More info -0.51 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
132 seed germinating in countinuous light 24h SL -0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
133 Mutant iaa17-6 -0.50 >More info -0.13 >More info Col Original data GEO bulk
134 Shoot submergence 7h 0.63 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
135 Mutant ein2(leaf) -0.09 >More info -0.50 >More info Col-0 (leaf) Original data GEO bulk
136 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
137 Shoot apex inflorescence (after bolting) -0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
138 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
139 M6PR transgenic leaf 100mM NaCl -0.01 >More info 0.52 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
140 Polysomal RNA 35S:HF-RPL18 cold -0.01 >More info 0.52 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
141 siliques AtHb1 control -0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
142 AGL24 induced -0.08 >More info 0.53 >More info WT-ESTRADIOL Original data GEO bulk