4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on pif4pif5 mut 24h FR
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List of experiments correlated with "pif4pif5 mut 24h FR"  Help Download transcriptome of top 30
Score Experiment Correlation from
pif4pif5 mut 24h FR		 Correlation to
pif4pif5 mut 24h FR		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pif4pif5 mut 24h FR 1.00 >More info 1.00 >More info WT 24h FR Original data GEO bulk
2 piffq FR 3h 0.80 >More info 0.68 >More info WT FR 3h whole seedling Original data GEO bulk
3 WT(Ler) Rc50 0.72 >More info 0.66 >More info WT(Ler) Dark Original data GEO bulk
4 pif4pif5 mut 1h FR 0.70 >More info 0.65 >More info WT 1h FR Original data GEO bulk
5 Col-0 low R/FR -0.64 >More info -0.70 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
6 WT(Ler) Rc15 0.69 >More info 0.64 >More info WT(Ler) Dark Original data GEO bulk
7 WT Rc50 0.69 >More info 0.63 >More info WT Dark red light whole seedling Original data GEO bulk
8 Light 4h polysome-bound 0.68 >More info 0.63 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
9 Light 4h steady-state 0.64 >More info 0.63 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
10 etiolated cop1BBX22-GFPox 0.66 >More info 0.60 >More info etiolated Col-0 whole seedlings Original data GEO bulk
11 WT Red light 18h 0.65 >More info 0.59 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
12 phyAphyB Dark -0.61 >More info -0.63 >More info phyB Dark Original data GEO bulk
13 phyB Dark 0.61 >More info 0.62 >More info WT(Ler) Dark Original data GEO bulk
14 piffq FR 1h 0.71 >More info 0.51 >More info WT FR 1h whole seedling Original data GEO bulk
15 low R/FR mock spray -0.64 >More info -0.57 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
16 bri1-116 0.40 >More info 0.73 >More info Col seedling Original data GEO bulk
17 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.66 >More info 0.46 >More info 2d dark-grown WT seedling Original data GEO bulk
18 FarRed Light 45min -0.35 >More info -0.75 >More info White Light 45min Original data Light treatments
19 WT NAA 1h -0.52 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
20 pif5 low R/FR 0.53 >More info 0.54 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
21 low R/FR JA spray -0.59 >More info -0.48 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
22 Dark 4 h pls RedLight 1min 0.44 >More info 0.62 >More info Dark 4 h Original data Light treatments
23 pif4pif5 low R/FR 0.60 >More info 0.45 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
24 Dark 4 h pls UV-A 5 min 0.59 >More info 0.46 >More info Dark 4 h Original data Light treatments
25 Light 0.5h polysome-bound 0.46 >More info 0.59 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
26 pif4pif5 mut dark 0.42 >More info 0.59 >More info WT dark Original data GEO bulk
27 aerial organ callus inducing medium 12 h -0.62 >More info -0.38 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
28 CabpBVR2 -0.54 >More info -0.46 >More info WT Original data GEO bulk
29 Shoot dark control 7h -0.55 >More info -0.44 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
30 WT hypoxia -0.55 >More info -0.44 >More info WT normoxia whole rosette Original data
31 petiole in FRD -0.61 >More info -0.38 >More info petiole in WL petioles Original data GEO bulk
32 aerial organ callus inducing medium 24h -0.63 >More info -0.36 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
33 Red Light 45min -0.34 >More info -0.65 >More info White Light 45min Original data Light treatments
34 Dark 4 h pls UV-AB 5min 0.61 >More info 0.37 >More info Dark 4 h Original data Light treatments
35 Col-0 shade -0.42 >More info -0.56 >More info Col-0 light seedlings Original data GEO bulk
36 aerial organ callus inducing medium 48 h -0.64 >More info -0.32 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
37 Light 0.5h steady-state 0.33 >More info 0.62 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
38 pif5 high R/FR 0.29 >More info 0.66 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
39 Shoot dark control 24h -0.51 >More info -0.43 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
40 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
41 GST 4 h (leaf) -0.56 >More info -0.37 >More info Mock 4 h (leaf) Original data Elicitor treatments
42 WT light 0.52 >More info 0.41 >More info WT dark Original data GEO bulk
43 IAA 1 h -0.35 >More info -0.54 >More info Mock 1 h Original data Basic hormone treatment of seedlings
44 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.53 >More info 0.34 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
45 pif4pif5 high R/FR 0.33 >More info 0.54 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
46 Dark 40 min pls UV-A 5 min 0.29 >More info 0.57 >More info Dark 45 min Original data Light treatments
47 aerial organ callus inducing medium 96 h -0.53 >More info -0.29 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
48 leaf blade in FRD -0.57 >More info -0.25 >More info leaf blade in WL leaf blades Original data GEO bulk
49 low CO2 + dark -0.50 >More info -0.31 >More info normal CO2 + light Original data GEO bulk
50 gun1-1 +lincomycin 0.24 >More info 0.56 >More info Col-0 +lincomycin Original data GEO bulk
51 Dark 44min pls RedLigh 1min 0.28 >More info 0.51 >More info Dark 45 min Original data Light treatments
52 piffq FR 24h 0.54 >More info 0.14 >More info WT FR 24h whole seedling Original data GEO bulk
53 Laer pretreat GA Flg22 1h -0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
54 dcl2-1 -0.52 >More info -0.14 >More info Col-0 Original data GEO bulk
55 dcl3-1 -0.56 >More info -0.08 >More info Col-0 Original data GEO bulk
56 etiolated cop1 0.60 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
57 Heat shock optimum -0.01 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
58 xyl-grown cell culture- 1h 1mM Suc 0.07 >More info 0.57 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
59 Brz220 12 h 0.07 >More info 0.55 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
60 Shoot apex inflorescence (after bolting) -0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
61 Cs shoot 0.02 >More info 0.57 >More info control shoot Original data GEO bulk
62 Col BTH -0.09 >More info 0.67 >More info Col rosettes Original data GEO bulk
63 FarRed Light 4 h 0.05 >More info 0.51 >More info White Light 4 h Original data Light treatments
64 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
65 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
66 root - 08% oxygen - 30min 0.08 >More info -0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
67 siliques AtHb1 control -0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
68 light 0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
69 gabaculin -0.50 >More info 0.12 >More info WT Col-0 seedling Original data GEO bulk
70 P.syringae AvrRpt2 4 h (leaf) -0.54 >More info 0.19 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 Col0-PsmES4326-24hpi -0.27 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
72 5-Triiodobenzoic acid3 h -0.19 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
73 Leafminer damaged seedlings -0.42 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk