4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on CabpBVR2
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List of experiments correlated with "CabpBVR2"  Help Download transcriptome of top 30
Score Experiment Correlation from
CabpBVR2		 Correlation to
CabpBVR2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 CabpBVR2 1.00 >More info 1.00 >More info WT Original data GEO bulk
2 35SpBVR3 0.86 >More info 0.84 >More info WT Original data GEO bulk
3 etiolated cop1BBX22-GFPox -0.80 >More info -0.76 >More info etiolated Col-0 whole seedlings Original data GEO bulk
4 WT light -0.79 >More info -0.76 >More info WT dark Original data GEO bulk
5 phyB Dark -0.78 >More info -0.75 >More info WT(Ler) Dark Original data GEO bulk
6 phyAphyB Dark 0.77 >More info 0.74 >More info phyB Dark Original data GEO bulk
7 csn5 (csn5a-2 csn5b) dark -0.76 >More info -0.74 >More info WT dark Original data GEO bulk
8 cop1 Seedling Dark -0.71 >More info -0.78 >More info WT Seedling Dark Original data GEO bulk
9 WT Seedling BL -0.74 >More info -0.75 >More info WT Seedling Dark Original data GEO bulk
10 WT Rc50 -0.75 >More info -0.73 >More info WT Dark red light whole seedling Original data GEO bulk
11 WT Red light 18h -0.73 >More info -0.74 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
12 WT(Ler) Rc50 -0.75 >More info -0.72 >More info WT(Ler) Dark Original data GEO bulk
13 csn4-1 mutant -0.75 >More info -0.71 >More info WT dark Original data GEO bulk
14 csn3-1 dark -0.74 >More info -0.72 >More info WT dark Original data GEO bulk
15 atmyc2 cop1 Seedling Dark -0.70 >More info -0.73 >More info WT Seedling Dark Original data GEO bulk
16 phr1 Shoot-Pi -0.72 >More info -0.71 >More info WT Root-Pi shoots Original data GEO bulk
17 phr1 phl1 Root-Pi 0.71 >More info 0.72 >More info WT Shoot+Pi roots Original data GEO bulk
18 WT(Ler) Rc15 -0.71 >More info -0.68 >More info WT(Ler) Dark Original data GEO bulk
19 Col-0 low oxygen 0.69 >More info 0.63 >More info Col-0 Original data GEO bulk
20 Light 4h polysome-bound -0.64 >More info -0.65 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
21 aerial organ callus inducing medium 96 h 0.61 >More info 0.68 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
22 Col-0 Root 100 mM ATP 30 min -0.70 >More info -0.54 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
23 Light 4h steady-state -0.61 >More info -0.63 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
24 Laer pretreat GA Flg22 1h 0.51 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
25 T6 leaf-drought 0.51 >More info 0.68 >More info T6 leaf-well watered Original data GEO bulk
26 gun1-1 +lincomycin -0.59 >More info -0.60 >More info Col-0 +lincomycin Original data GEO bulk
27 aerial organ callus inducing medium 48 h 0.60 >More info 0.59 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
28 cngc19 0.59 >More info 0.60 >More info Col-0 root Original data GEO bulk
29 col-5 DC3000 12h 0.55 >More info 0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
30 Dark 4 h pls RedLight 1min -0.42 >More info -0.76 >More info Dark 4 h Original data Light treatments
31 DC3000 7h 0.57 >More info 0.60 >More info Mock 7h DC3000 Original data GEO bulk
32 L2.4 mutant -0.55 >More info -0.61 >More info Wt Original data GEO bulk
33 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
34 toc1-1-85hr -0.46 >More info -0.69 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
35 Botrytis cinerea 48h 0.59 >More info 0.54 >More info control 48h Original data GEO bulk
36 AtLysM RLK1 mutant water -0.59 >More info -0.53 >More info WT water Original data GEO bulk
37 col-5 hrpA 12h 0.51 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
38 afb3-1 2h KNO3 -0.46 >More info -0.65 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
39 low water potential 0.62 >More info 0.49 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
40 Osmotic Stress 24 h (shoot) 0.54 >More info 0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
41 NAA -AA 0.59 >More info 0.51 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
42 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.54 >More info -0.55 >More info 2d dark-grown WT seedling Original data GEO bulk
43 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.54 >More info -0.54 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
44 Leafminer damaged seedlings 0.52 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
45 pif4pif5 mut 1h FR -0.52 >More info -0.56 >More info WT 1h FR Original data GEO bulk
46 eto1-4 + AVG 0.45 >More info 0.63 >More info eto1-4 whole seedling Original data GEO bulk
47 Dark 4 h pls UV-A 5 min -0.47 >More info -0.60 >More info Dark 4 h Original data Light treatments
48 hsfa1 quadruple mutant 0.56 >More info 0.49 >More info WT (Col-0) whole seedling Original data GEO bulk
49 Laer pretreat GA+JA Flg22 2h 0.60 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
50 Heat shock optimum 0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
51 GiantCell Root -0.50 >More info -0.54 >More info Control Root laser captured giant cells Original data GEO bulk
52 fri-flc 0.56 >More info 0.48 >More info WT Original data GEO bulk
53 aerial organ callus inducing medium 24h 0.52 >More info 0.52 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
54 aerial organ callus inducing medium 12 h 0.47 >More info 0.56 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
55 T8 leaf-drought 0.50 >More info 0.52 >More info T8 leaf-well watered Original data GEO bulk
56 flu over-tAPX 0.54 >More info 0.48 >More info WT Col Original data GEO bulk
57 Red/FR Light45min 0.30 >More info 0.72 >More info FarRed Light 45min Original data Light treatments
58 WT-16ºC 0.45 >More info 0.57 >More info WT-23ºC Original data GEO bulk
59 Seedling KUA1-IOX est 0.36 >More info 0.66 >More info Seedling KUA1-IOX mock Original data
60 rosettes atx drought 0.55 >More info 0.46 >More info rosettes atx watered Original data GEO bulk
61 AtGATA2ox -0.50 >More info -0.51 >More info Col seedling Original data GEO bulk
62 Dark 4 h pls UV-AB 5min -0.54 >More info -0.47 >More info Dark 4 h Original data Light treatments
63 35S-MIF1 light grown 0.44 >More info 0.57 >More info Light-grown WT control Original data GEO bulk
64 Wt-BA-sample 0.44 >More info 0.57 >More info Wt-dmso-sample seedling Original data
65 Dark 2day wt 0.59 >More info 0.41 >More info 0h wt Original data
66 dor drought 0.43 >More info 0.57 >More info WT drought Original data GEO bulk
67 pif4pif5 mut 24h FR -0.46 >More info -0.54 >More info WT 24h FR Original data GEO bulk
68 pif3 Dark 0h -0.49 >More info -0.50 >More info WT Dark 0h etiolated seedling Original data GEO bulk
69 ahg2-1sid2-2 -0.50 >More info -0.48 >More info WT (Col) control Original data GEO bulk
70 Laer pretreat GA+JA Flg22 1h 0.59 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
71 Shoot dark control 24h 0.50 >More info 0.48 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
72 ulp1c ulp1d +Pto 0.50 >More info 0.48 >More info ulp1c ulp1d mock Original data GEO bulk
73 Dark 2day hml 0.57 >More info 0.41 >More info 0h hml Original data
74 WT no Pi 0.58 >More info 0.40 >More info WT complete seedlings Original data
75 Estradiol4 days 0.46 >More info 0.52 >More info Col Original data GEO bulk
76 root longitudinal zone-3 -Fe 0.33 >More info 0.65 >More info root longitudinal zone-3 standard Original data GEO bulk
77 estradiol induced LEC1 0.46 >More info 0.52 >More info control Original data GEO bulk
78 toc1-1-81hr -0.39 >More info -0.59 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
79 35:SUB1C 0.44 >More info 0.54 >More info WT whole seedling Original data GEO bulk
80 gun1gun5 Norflurazon -0.43 >More info -0.55 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
81 2hr continuous KNO3 ECR cell 0.33 >More info 0.65 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
82 phyB Rc50 -0.43 >More info -0.55 >More info WT(Ler) Rc50 Original data GEO bulk
83 ABA DFPM 0.54 >More info 0.43 >More info control Original data GEO bulk
84 C2 leaf-drought 0.51 >More info 0.45 >More info C2 leaf-well watered Original data GEO bulk
85 aox1a:rpoTmp MLD stressed -0.40 >More info -0.55 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
86 Leafminer locally damaged thaliana seedlings 0.52 >More info 0.43 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
87 CCA14 dark late 0.60 >More info 0.35 >More info Col dark late Original data GEO bulk
88 tfl1-1-23ºC 0.37 >More info 0.58 >More info WT-23ºC Original data GEO bulk
89 Dark 3day wt 0.56 >More info 0.38 >More info 0h wt Original data
90 light -0.76 >More info -0.18 >More info dark light seedling Original data GEO bulk
91 Dark 1day ivd 0.56 >More info 0.37 >More info 0h ivd Original data
92 erf104-ko Flg22 4h 0.54 >More info 0.39 >More info erf104-ko H2O 4h Original data GEO bulk
93 MYB46-GR DEX 0.17 >More info 0.76 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
94 Laer pretreat GA+JA Flg22 0h 0.59 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
95 HopZ1a treated 0.51 >More info 0.42 >More info col Original data GEO bulk
96 35S::ERF104 Flg22 4h 0.41 >More info 0.52 >More info 35S::ERF104 H2O 4h Original data GEO bulk
97 pif4pif5 mut dark -0.27 >More info -0.65 >More info WT dark Original data GEO bulk
98 low CO2 + dark 0.39 >More info 0.53 >More info normal CO2 + light Original data GEO bulk
99 Col BTH 0.25 >More info 0.67 >More info Col rosettes Original data GEO bulk
100 HopZ1a treated ulp1c ulp1d 0.51 >More info 0.41 >More info col Original data GEO bulk
101 21h-DC3000 avrRpm1 -0.32 >More info -0.60 >More info 21h-DC3000 leaves Original data GEO bulk
102 sicy-192 cotyledons 0.51 >More info 0.40 >More info WT cotyledons cotyledons Original data
103 ced1 -0.50 >More info -0.41 >More info WT PEG 6hr seedlings Original data GEO bulk
104 E.coli 0157 H7 7h 0.33 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
105 Dark 3day ivd 0.56 >More info 0.34 >More info 0h ivd Original data
106 Dark 1day hml 0.54 >More info 0.36 >More info 0h hml Original data
107 4h light (+Lincomycin) 0.50 >More info 0.40 >More info 4h light (-Lincomycin) seedlings Original data GEO bulk
108 Cor 10h 0.50 >More info 0.40 >More info Mock 10h Cor Original data GEO bulk
109 PAHs stress 0.56 >More info 0.33 >More info exp control phenanthrene whole plants Original data GEO bulk
110 rosettes drought 0.50 >More info 0.39 >More info rosettes watered Original data GEO bulk
111 Dark 3day hml 0.53 >More info 0.36 >More info 0h hml Original data
112 24h light (+Lincomycin) 0.52 >More info 0.37 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
113 Mutant sav3-2 (WL) -0.37 >More info -0.52 >More info Col-0 (WL) Original data GEO bulk
114 sav3-2 light -0.37 >More info -0.52 >More info Col-0 light seedlings Original data GEO bulk
115 T101D 10mM NH4NO3 0.37 >More info 0.52 >More info col 10mM NH4NO3 Root Original data
116 ABA 1 h 0.20 >More info 0.68 >More info Mock 1 h Original data Basic hormone treatment of seedlings
117 Pto inoculated 0.52 >More info 0.36 >More info col Original data GEO bulk
118 phr1 phl1 Shoot-Pi -0.50 >More info -0.38 >More info WT Shoot-Pi shoots Original data GEO bulk
119 mpk6-ko Flg22 4h 0.36 >More info 0.52 >More info mpk6-ko H2O 4h Original data GEO bulk
120 triploid female excess -0.24 >More info -0.64 >More info tetraploid Original data GEO bulk
121 SCL3 OE 0.61 >More info 0.25 >More info Col-0 whole root Original data GEO bulk
122 24h volatiles Sp. HRO-C48 -0.30 >More info -0.55 >More info 24h untreated whole seedling Original data GEO bulk
123 noa1-2 -0.33 >More info -0.52 >More info Col-0 whole seedlings Original data GEO bulk
124 FarRed Light 4 h -0.35 >More info -0.50 >More info White Light 4 h Original data Light treatments
125 Dark 1day wt 0.54 >More info 0.30 >More info 0h wt Original data
126 21h-DC3000 hrpA -0.30 >More info -0.54 >More info 21h-DC3000 leaves Original data GEO bulk
127 toc1-1-89hr -0.33 >More info -0.51 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
128 root stele -S -0.28 >More info -0.55 >More info root stele pH5.7 Original data GEO bulk
129 root - 04% oxygen - 48h -0.51 >More info -0.31 >More info root - 21% oxygen - 48h Original data GEO bulk
130 sfr6 drought -0.27 >More info -0.55 >More info WT drought All aerial tissue Original data GEO bulk
131 NaCl scm 0.32 >More info 0.50 >More info NaCl Col Original data GEO bulk
132 bbx24 in Simulated Shade 0.25 >More info 0.57 >More info WT in simulated shade shade seedling Original data
133 ABA 3 h 0.30 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
134 npr1 0.27 >More info 0.54 >More info WT(COL) Original data GEO bulk
135 2hr transitory KNO3 ECR cell 0.29 >More info 0.52 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
136 rdr6-15 -0.53 >More info -0.27 >More info Col-0 plant inflorescence Original data
137 nhx5-2/nhx6 0.27 >More info 0.53 >More info WT Rosette leaf Original data GEO bulk
138 35S:MYB28 like miR -0.28 >More info -0.52 >More info WT for miR Original data GEO bulk
139 Laer pretreat JA Flg22 2h 0.57 >More info 0.23 >More info Laer pretreat water control leaf discs Original data GEO bulk
140 arr-BA-sample -0.28 >More info -0.51 >More info Wt-BA-sample seedling Original data
141 gul2-1 mutant 0.51 >More info 0.27 >More info WT 7 day-old whole seedlings Original data
142 phyABDE Rc50 -0.50 >More info -0.27 >More info phyABDE Dark red light whole seedling Original data GEO bulk
143 ABA 0.5 h 0.21 >More info 0.56 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
144 root cortex pH4.6 -0.23 >More info -0.54 >More info root cortex pH5.7 Original data GEO bulk
145 Col-0 drought 0.50 >More info 0.26 >More info Col-0 control Original data GEO bulk
146 8h-DC3000 hrpA 0.23 >More info 0.53 >More info 8h-DC3000 leaves Original data GEO bulk
147 root epidermis and lateral root cap -S -0.22 >More info -0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
148 Paclobutrazol 12 h 0.23 >More info 0.52 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
149 Laer pretreat JA Flg22 1h 0.55 >More info 0.19 >More info Laer pretreat water control leaf discs Original data GEO bulk
150 Col-7 Sucrose 0.53 >More info 0.21 >More info col-7 Original data GEO bulk
151 etiolated cop1 -0.78 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
152 cngc1-3 0.51 >More info 0.22 >More info Col-0 root Original data GEO bulk
153 gpa1 -ABA GC -0.23 >More info -0.50 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
154 Col leaf scrape 5 dpi 0.52 >More info 0.20 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
155 Ambient CO2 expanding leaf -0.50 >More info -0.22 >More info Control for tissue data expanding leaf Original data
156 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
157 ABA JA 24h 0.21 >More info 0.51 >More info EtOH 24h 24hr Original data GEO bulk
158 Col-0 35S:MBS1 HL 3h -0.14 >More info -0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
159 erf104-ko H2O 4h -0.54 >More info -0.17 >More info Col-0 H2O 4h Original data GEO bulk
160 Differentiation 48h 0.52 >More info 0.19 >More info Differentiation 0h leaves Original data
161 vtc1-1 -0.20 >More info -0.51 >More info Col-0 whole plant Original data GEO bulk
162 GiantCell Root -0.20 >More info -0.51 >More info Control Root laser captured giant cells Original data GEO bulk
163 ckh2 CK25 -0.18 >More info -0.53 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
164 ABA SA 24h 0.16 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
165 3x(m) 0.04 >More info 0.65 >More info 2x two week old seedlings Original data
166 seedling -S Exp 0.50 >More info 0.19 >More info seedling FN Exp seedling Original data
167 35S:ATR1 like miR -0.18 >More info -0.51 >More info WT for miR Original data GEO bulk
168 Differentiation 36h 0.51 >More info 0.17 >More info Differentiation 0h leaves Original data
169 Prohexadione 3 h 0.14 >More info 0.54 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
170 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
171 35S::ERF104 H2O 4h -0.52 >More info -0.13 >More info Col-0 H2O 4h Original data GEO bulk
172 root longitudinal zone-4 -Fe 0.14 >More info 0.51 >More info root longitudinal zone-4 standard Original data GEO bulk
173 erf5 erf6 +chitooctaose 0.14 >More info 0.51 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
174 WT 3H Cold 0.14 >More info 0.51 >More info WT control Original data GEO bulk
175 aln-1 0.51 >More info 0.13 >More info Col-0 Aerial part of seedlings Original data
176 35S:RPS4 rrs1-11 T0 0.14 >More info 0.50 >More info 35S:RPS4 T0 leaves Original data
177 low CO2 + light 0.13 >More info 0.50 >More info normal CO2 + light Original data GEO bulk
178 Dark 2day ivd 0.57 >More info -0.01 >More info 0h ivd Original data
179 shoot hypoxia p35S 0.05 >More info 0.50 >More info shoot hypoxia total Original data GEO bulk
180 Ler KAR1 24h seed 0.01 >More info -0.55 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
181 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
182 opr3 OPDA 2 h 0.02 >More info 0.51 >More info opr3 0 h Original data GEO bulk
183 4C 2h(SOIL) -0.01 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
184 dorn1-1 Root 100 mM ATP 30 min 0.58 >More info -0.11 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
185 Shoot apex inflorescence (after bolting) -0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
186 Polysomal RNA 35S:HF-RPL18 -0.05 >More info 0.50 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
187 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
188 opr3 OPDA 0.5 h -0.16 >More info 0.58 >More info opr3 0 h Original data GEO bulk
189 Col PSTDC3000 24h 0.50 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
190 P. infestans 6 h (leaf) 0.51 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
191 bri1-116 -0.63 >More info 0.73 >More info Col seedling Original data GEO bulk