4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35SpBVR3
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List of experiments correlated with "35SpBVR3"  Help Download transcriptome of top 30
Score Experiment Correlation from
35SpBVR3		 Correlation to
35SpBVR3		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35SpBVR3 1.00 >More info 1.00 >More info WT Original data GEO bulk
2 CabpBVR2 0.84 >More info 0.86 >More info WT Original data GEO bulk
3 WT Red light 18h -0.77 >More info -0.77 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
4 WT light -0.79 >More info -0.75 >More info WT dark Original data GEO bulk
5 csn4-1 mutant -0.78 >More info -0.74 >More info WT dark Original data GEO bulk
6 etiolated cop1BBX22-GFPox -0.76 >More info -0.74 >More info etiolated Col-0 whole seedlings Original data GEO bulk
7 csn5 (csn5a-2 csn5b) dark -0.77 >More info -0.72 >More info WT dark Original data GEO bulk
8 csn3-1 dark -0.77 >More info -0.72 >More info WT dark Original data GEO bulk
9 phyB Dark -0.73 >More info -0.73 >More info WT(Ler) Dark Original data GEO bulk
10 WT Seedling BL -0.72 >More info -0.73 >More info WT Seedling Dark Original data GEO bulk
11 phyAphyB Dark 0.73 >More info 0.72 >More info phyB Dark Original data GEO bulk
12 Light 4h polysome-bound -0.71 >More info -0.72 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
13 Light 4h steady-state -0.70 >More info -0.72 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
14 WT Rc50 -0.73 >More info -0.69 >More info WT Dark red light whole seedling Original data GEO bulk
15 WT(Ler) Rc50 -0.72 >More info -0.69 >More info WT(Ler) Dark Original data GEO bulk
16 WT(Ler) Rc15 -0.70 >More info -0.66 >More info WT(Ler) Dark Original data GEO bulk
17 cop1 Seedling Dark -0.67 >More info -0.66 >More info WT Seedling Dark Original data GEO bulk
18 atmyc2 cop1 Seedling Dark -0.63 >More info -0.66 >More info WT Seedling Dark Original data GEO bulk
19 aerial organ callus inducing medium 96 h 0.66 >More info 0.63 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
20 phr1 Shoot-Pi -0.66 >More info -0.62 >More info WT Root-Pi shoots Original data GEO bulk
21 Dark 4 h pls RedLight 1min -0.53 >More info -0.73 >More info Dark 4 h Original data Light treatments
22 phr1 phl1 Root-Pi 0.66 >More info 0.60 >More info WT Shoot+Pi roots Original data GEO bulk
23 Shoot dark control 24h 0.64 >More info 0.61 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
24 Dark 4 h pls UV-AB 5min -0.62 >More info -0.62 >More info Dark 4 h Original data Light treatments
25 aerial organ callus inducing medium 48 h 0.67 >More info 0.56 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
26 Col-0 low oxygen 0.63 >More info 0.59 >More info Col-0 Original data GEO bulk
27 pif4pif5 mut 1h FR -0.61 >More info -0.60 >More info WT 1h FR Original data GEO bulk
28 Shoot submergence 24h 0.63 >More info 0.58 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
29 WT Red light 1h -0.56 >More info -0.65 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
30 low CO2 + dark 0.55 >More info 0.66 >More info normal CO2 + light Original data GEO bulk
31 Dark 4 h pls UV-A 5 min -0.56 >More info -0.64 >More info Dark 4 h Original data Light treatments
32 Laer pretreat GA Flg22 1h 0.49 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
33 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.57 >More info -0.61 >More info 2d dark-grown WT seedling Original data GEO bulk
34 gun1-1 +lincomycin -0.53 >More info -0.63 >More info Col-0 +lincomycin Original data GEO bulk
35 Shoot dark control 7h 0.61 >More info 0.53 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
36 Col0-PsmES4326-24hpi 0.53 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
37 L2.4 mutant -0.57 >More info -0.56 >More info Wt Original data GEO bulk
38 Dark 2day wt 0.64 >More info 0.48 >More info 0h wt Original data
39 col-5 DC3000 12h 0.53 >More info 0.59 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
40 AtLysM RLK1 mutant water -0.62 >More info -0.48 >More info WT water Original data GEO bulk
41 Red/FR Light 4 h 0.49 >More info 0.61 >More info FarRed Light 4 h Original data Light treatments
42 DC3000 7h 0.53 >More info 0.56 >More info Mock 7h DC3000 Original data GEO bulk
43 Osmotic Stress 24 h (shoot) 0.54 >More info 0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
44 Dark 1day hml 0.62 >More info 0.46 >More info 0h hml Original data
45 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.51 >More info -0.56 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
46 aerial organ callus inducing medium 12 h 0.52 >More info 0.55 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
47 tfl1-1-23ºC 0.55 >More info 0.52 >More info WT-23ºC Original data GEO bulk
48 col-5 hrpA 12h 0.51 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
49 aerial organ callus inducing medium 24h 0.58 >More info 0.49 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
50 Estradiol4 days 0.47 >More info 0.60 >More info Col Original data GEO bulk
51 estradiol induced LEC1 0.47 >More info 0.60 >More info control Original data GEO bulk
52 Dark 3day wt 0.61 >More info 0.45 >More info 0h wt Original data
53 Dark 2day hml 0.61 >More info 0.45 >More info 0h hml Original data
54 Red Light 4 h 0.39 >More info 0.67 >More info White Light 4 h Original data Light treatments
55 eto1-4 + AVG 0.48 >More info 0.58 >More info eto1-4 whole seedling Original data GEO bulk
56 21h-DC3000 avrRpm1 -0.39 >More info -0.66 >More info 21h-DC3000 leaves Original data GEO bulk
57 CHLM overexpression -0.58 >More info -0.47 >More info Col-0 estr green tissue Original data GEO bulk
58 Dark 1day ivd 0.60 >More info 0.44 >More info 0h ivd Original data
59 Dark 6h ivd 0.59 >More info 0.45 >More info 0h ivd Original data
60 Col-0 DCA 6d 0.48 >More info 0.56 >More info Col-0 MOCK 6d Original data GEO bulk
61 Leafminer damaged seedlings 0.48 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
62 NAA -AA 0.60 >More info 0.43 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
63 Col BTH 0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk
64 fri-flc 0.52 >More info 0.50 >More info WT Original data GEO bulk
65 phyABDE Rc50 -0.56 >More info -0.46 >More info phyABDE Dark red light whole seedling Original data GEO bulk
66 Dark 1day wt 0.61 >More info 0.41 >More info 0h wt Original data
67 FarRed Light 4 h -0.41 >More info -0.61 >More info White Light 4 h Original data Light treatments
68 aox1a:rpoTmp MLD stressed -0.47 >More info -0.55 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
69 GiantCell Root -0.53 >More info -0.48 >More info Control Root laser captured giant cells Original data GEO bulk
70 Dark 3day hml 0.58 >More info 0.43 >More info 0h hml Original data
71 detached inflorescences 24h 0.53 >More info 0.48 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
72 Seedling KUA1-IOX est 0.35 >More info 0.66 >More info Seedling KUA1-IOX mock Original data
73 seedling 24h after Gamma atm-1 -0.49 >More info -0.52 >More info seedling day 2 unirradiated atm-1 24h Original data
74 35S-MIF1 light grown 0.33 >More info 0.67 >More info Light-grown WT control Original data GEO bulk
75 35:SUB1C 0.45 >More info 0.55 >More info WT whole seedling Original data GEO bulk
76 1 h Light Total RNA -0.49 >More info -0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
77 WT hypoxia 0.49 >More info 0.51 >More info WT normoxia whole rosette Original data
78 Dark 6h hml 0.58 >More info 0.41 >More info 0h hml Original data
79 T6 leaf-drought 0.42 >More info 0.57 >More info T6 leaf-well watered Original data GEO bulk
80 Col-0 Root 100 mM ATP 30 min -0.56 >More info -0.42 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
81 Col-0 C2H4 24h 0.50 >More info 0.48 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
82 35S::ERF104 Flg22 4h 0.50 >More info 0.48 >More info 35S::ERF104 H2O 4h Original data GEO bulk
83 Day Time Treatment -0.47 >More info -0.51 >More info Day Time Control 1hr white light pulse aerial rosette Original data
84 Dark 3day ivd 0.58 >More info 0.39 >More info 0h ivd Original data
85 light -0.78 >More info -0.18 >More info dark light seedling Original data GEO bulk
86 Col-0 9 hpi A. brassicicola 0.50 >More info 0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
87 Propiconazole 12 h 0.36 >More info 0.60 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
88 seedling 24h after Gamma WT -0.43 >More info -0.53 >More info seedling day 2 unirradiated WT 24h Original data
89 CCA14 dark late 0.53 >More info 0.42 >More info Col dark late Original data GEO bulk
90 Laer pretreat GA+JA Flg22 2h 0.53 >More info 0.42 >More info Laer pretreat water control leaf discs Original data GEO bulk
91 Dark 6h wt 0.58 >More info 0.37 >More info 0h wt Original data
92 Mutant ga1-5 0.45 >More info 0.50 >More info Ler-1 Original data Comparison of plant hormone related mutant
93 root longitudinal zone-3 -Fe 0.35 >More info 0.60 >More info root longitudinal zone-3 standard Original data GEO bulk
94 low CO2 + light 0.39 >More info 0.55 >More info normal CO2 + light Original data GEO bulk
95 sav3-2 light -0.51 >More info -0.43 >More info Col-0 light seedlings Original data GEO bulk
96 Mutant sav3-2 (WL) -0.51 >More info -0.43 >More info Col-0 (WL) Original data GEO bulk
97 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
98 ABA JA 24h 0.37 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
99 GST NPP1 4 h (leaf) 0.52 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
100 petiole in FRD 0.51 >More info 0.42 >More info petiole in WL petioles Original data GEO bulk
101 efr-1 +elf18 10h -0.51 >More info -0.42 >More info WT +elf18 10h elf18 Original data GEO bulk
102 seedlings + TSA -0.51 >More info -0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
103 TNT-seedlings 0.42 >More info 0.50 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
104 Flagellin 4 h (leaf) 0.51 >More info 0.40 >More info Mock 4 h (leaf) Original data Elicitor treatments
105 21h-DC3000 hrpA -0.36 >More info -0.55 >More info 21h-DC3000 leaves Original data GEO bulk
106 stn7-1 -0.50 >More info -0.41 >More info Col-0 rosette leaves Original data GEO bulk
107 Paclobutrazol 12 h 0.31 >More info 0.60 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
108 sfr6 drought -0.36 >More info -0.54 >More info WT drought All aerial tissue Original data GEO bulk
109 Laer pretreat GA+JA Flg22 1h 0.52 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
110 HopZ1a treated ulp1c ulp1d 0.53 >More info 0.36 >More info col Original data GEO bulk
111 edr1 36 h powdery mildew 0.53 >More info 0.36 >More info Col-0 36 h powdery mildew Original data GEO bulk
112 erf104-ko H2O 4h -0.57 >More info -0.32 >More info Col-0 H2O 4h Original data GEO bulk
113 axr2-BR -0.58 >More info -0.31 >More info BR BR dark-grown seedlings Original data GEO bulk
114 pif4pif5 mut dark -0.30 >More info -0.59 >More info WT dark Original data GEO bulk
115 8h-DC3000 hrpA 0.31 >More info 0.58 >More info 8h-DC3000 leaves Original data GEO bulk
116 CHLD reduction -0.55 >More info -0.33 >More info Col-0 dex green tissue Original data GEO bulk
117 Botrytis cinerea 48h 0.50 >More info 0.38 >More info control 48h Original data GEO bulk
118 dorn1-1 Root MES buffer 30 min -0.38 >More info -0.50 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
119 SCR-GR Time 1H Dex 0.30 >More info 0.58 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
120 afb3-1 2h KNO3 -0.29 >More info -0.59 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
121 HopZ1a treated 0.53 >More info 0.34 >More info col Original data GEO bulk
122 Blue Light 4 h -0.32 >More info -0.55 >More info White Light 4 h Original data Light treatments
123 WT (Col) glucose -0.33 >More info -0.54 >More info WT (Col) glucose seedlings Original data GEO bulk
124 abi4-102 -lincomycin 0.59 >More info 0.28 >More info Col-0 -lincomycin Original data GEO bulk
125 low water potential 0.51 >More info 0.36 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
126 ced1 -0.50 >More info -0.37 >More info WT PEG 6hr seedlings Original data GEO bulk
127 A2hsfa1-ox in quadruple mutant heat shock -0.36 >More info -0.51 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
128 E.coli 0157 H7 7h 0.36 >More info 0.51 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
129 flu over-tAPX 0.53 >More info 0.33 >More info WT Col Original data GEO bulk
130 Col-0 overexpressing At1g54160 control -0.50 >More info -0.36 >More info WT no treatement Original data GEO bulk
131 At1g54160 ox -0.50 >More info -0.36 >More info Col-0 Original data GEO bulk
132 Drought Stress 24 h (shoot) 0.55 >More info 0.30 >More info Stress mock 24 h (shoot) Original data Stress treatments
133 root cortex pH4.6 -0.31 >More info -0.54 >More info root cortex pH5.7 Original data GEO bulk
134 Mutant cry1 0.23 >More info 0.62 >More info Col-0 Original data GEO bulk
135 cry1 low light 0.23 >More info 0.62 >More info Col-O low light Original data GEO bulk
136 rosettes atx drought 0.51 >More info 0.33 >More info rosettes atx watered Original data GEO bulk
137 Cs shoot 0.32 >More info 0.52 >More info control shoot Original data GEO bulk
138 Wt-BA-sample 0.28 >More info 0.56 >More info Wt-dmso-sample seedling Original data
139 WT in -N 0.52 >More info 0.31 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
140 root stele -S -0.28 >More info -0.55 >More info root stele pH5.7 Original data GEO bulk
141 npr1 0.29 >More info 0.54 >More info WT(COL) Original data GEO bulk
142 gpa1 -ABA LF 0.50 >More info 0.32 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
143 erf104-ko Flg22 4h 0.55 >More info 0.27 >More info erf104-ko H2O 4h Original data GEO bulk
144 Prohexadione 3 h 0.27 >More info 0.55 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
145 Dark 44min pls RedLigh 1min -0.27 >More info -0.55 >More info Dark 45 min Original data Light treatments
146 2d dark-grown WT(Col-0)/1 hr red light -0.25 >More info -0.57 >More info 2d dark-grown WT seedling Original data GEO bulk
147 Laer pretreat GA+JA Flg22 0h 0.50 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
148 Ambient CO2 expanding leaf -0.57 >More info -0.23 >More info Control for tissue data expanding leaf Original data
149 Ambient CO2 leaf primordia -0.52 >More info -0.26 >More info Control for tissue data leaf primordia Original data
150 Shoot -K 0.50 >More info 0.28 >More info Control-shoot Original data GEO bulk
151 K starvation (shoot) 0.50 >More info 0.28 >More info Ws (shoot) Original data GEO bulk
152 nas4x roots - Fe -0.23 >More info -0.55 >More info WT roots - Fe Roots Original data GEO bulk
153 ATR1 OE 0.23 >More info 0.55 >More info WT for ATR1/MYB51 Original data GEO bulk
154 Pto inoculated 0.52 >More info 0.25 >More info col Original data GEO bulk
155 ABA control 0.20 >More info 0.56 >More info No ABA control Original data GEO bulk
156 EL (leaves 1-2) 14DAS -0.52 >More info -0.23 >More info Control for tissue data Original data GEO bulk
157 WT cotyledons -0.52 >More info -0.23 >More info Control for tissue data cotyledons Original data
158 root epidermis and lateral root cap -S -0.19 >More info -0.56 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
159 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
160 triploid female excess -0.21 >More info -0.53 >More info tetraploid Original data GEO bulk
161 ahg2-1sid2-2 -0.54 >More info -0.19 >More info WT (Col) control Original data GEO bulk
162 Rosette leaf No12 -0.52 >More info -0.21 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
163 Elevated CO2 expanding leaf 0.22 >More info 0.51 >More info Ambient CO2 expanding leaf expanding leaf Original data
164 PAHs stress 0.50 >More info 0.22 >More info exp control phenanthrene whole plants Original data GEO bulk
165 rdr6-15 -0.54 >More info -0.17 >More info Col-0 plant inflorescence Original data
166 oas-a1.1 root -0.17 >More info -0.53 >More info WT-Untreated Root Original data GEO bulk
167 ABA SA 24h 0.14 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
168 35S::ERF104 H2O 4h -0.52 >More info -0.18 >More info Col-0 H2O 4h Original data GEO bulk
169 etiolated cop1 -0.74 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
170 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
171 ML (Mature leaves) 35DAS -0.50 >More info -0.17 >More info Control for tissue data Original data GEO bulk
172 Ambient CO2 fully expanded leaf -0.52 >More info -0.13 >More info Control for tissue data fully expanded leaf Original data
173 ahg2-1 -0.54 >More info -0.08 >More info WT (Col) control Original data GEO bulk
174 ahg1-1 0.01 >More info 0.61 >More info ABA control Original data GEO bulk
175 Shoot submergence 7h 0.61 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
176 Dark 2day ivd 0.62 >More info -0.01 >More info 0h ivd Original data
177 Polysomal RNA 35S:HF-RPL18 -0.06 >More info 0.61 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
178 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
179 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
180 HairpinZ 4 h (leaf) 0.52 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
181 seed germinating in countinuous light 24h SL -0.29 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
182 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
183 bri1-116 -0.52 >More info 0.73 >More info Col seedling Original data GEO bulk