4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on tfl1-1-23ºC
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List of experiments correlated with "tfl1-1-23ºC"  Help Download transcriptome of top 30
Score Experiment Correlation from
tfl1-1-23ºC		 Correlation to
tfl1-1-23ºC		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 tfl1-1-23ºC 1.00 >More info 1.00 >More info WT-23ºC Original data GEO bulk
2 tfl1-1-16ºC 0.63 >More info 0.72 >More info WT-16ºC Original data GEO bulk
3 low CO2 + dark 0.50 >More info 0.77 >More info normal CO2 + light Original data GEO bulk
4 low CO2 + light 0.51 >More info 0.71 >More info normal CO2 + light Original data GEO bulk
5 Shoot dark control 24h 0.44 >More info 0.70 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
6 WT H2O2 3h 0.56 >More info 0.57 >More info WT water 3h 3h_H2O2 Original data GEO bulk
7 Protoplast Induced 0.47 >More info 0.66 >More info Uninduced Original data GEO bulk
8 35S:LOB-GR mock -0.49 >More info -0.64 >More info Col mock mock seedling Original data GEO bulk
9 sex1-3 0.38 >More info 0.74 >More info Col-WT leaves Original data GEO bulk
10 exo70A1 0.57 >More info 0.53 >More info Col-0 whole plant Original data GEO bulk
11 17 0h total -0.64 >More info -0.46 >More info 27 0h total whole seedlings floating on MS medium Original data
12 siliques AtHb1 control 0.57 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
13 seedlings + TSA -0.69 >More info -0.40 >More info control seedlings 10-day old whole seedling Original data GEO bulk
14 WT (Col) glucose -0.38 >More info -0.70 >More info WT (Col) glucose seedlings Original data GEO bulk
15 35SpBVR3 0.52 >More info 0.55 >More info WT Original data GEO bulk
16 cca1-lhy 15m light 0.46 >More info 0.61 >More info 15m light whole seedlings Original data GEO bulk
17 Red/FR Light45min 0.53 >More info 0.53 >More info FarRed Light 45min Original data Light treatments
18 nas4x leaves - Fe -0.45 >More info -0.61 >More info WT leaves - Fe Leaves Original data GEO bulk
19 seedling 24h after Gamma atm-1 -0.44 >More info -0.62 >More info seedling day 2 unirradiated atm-1 24h Original data
20 17 2h total -0.73 >More info -0.32 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
21 Col-O high light 0.71 >More info 0.34 >More info Col-O bule light Original data GEO bulk
22 17 2h unlabelled -0.64 >More info -0.40 >More info 27 1h unlabelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
23 ms1 unpollinated 0.63 >More info 0.41 >More info WT 8h-pollinated pistil Original data GEO bulk
24 high-R:FR bud axillary -0.38 >More info -0.66 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
25 AFB1 0h 0.58 >More info 0.45 >More info Col 0h Leaf Original data GEO bulk
26 piffq FR 1h -0.66 >More info -0.37 >More info WT FR 1h whole seedling Original data GEO bulk
27 roots bhlh100/101 0uM Fe 0.51 >More info 0.52 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
28 Col0-PsmES4326-24hpi 0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
29 Col-0 under 4 days salt 0.58 >More info 0.44 >More info Col-0 under control 4 days salt treatment rosette Original data
30 phr1 phl1 Root-Pi 0.61 >More info 0.41 >More info WT Shoot+Pi roots Original data GEO bulk
31 mkk1 control rep -0.47 >More info -0.55 >More info Col-0 Time 0 rep Original data GEO bulk
32 Dark 3day wt 0.53 >More info 0.48 >More info 0h wt Original data
33 Dark 3day ivd 0.56 >More info 0.45 >More info 0h ivd Original data
34 24h SL Attim 17-1 1 -0.70 >More info -0.31 >More info 0 h Attim 17-1 1 seed Original data
35 Dark 2day hml 0.56 >More info 0.45 >More info 0h hml Original data
36 35S::HRE1 Aerobic 0.50 >More info 0.51 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
37 P.syringae vir 4 h (leaf) 0.39 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
38 Nicotinamide-93hr 0.40 >More info 0.61 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
39 FLIGHT TAGESB plate6 SHOOTS 0.36 >More info 0.65 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
40 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
41 24h SL WT -0.70 >More info -0.29 >More info 0 h WT seed Original data
42 Nicotinamide-65hr 0.47 >More info 0.52 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
43 WT 3H Cold 0.36 >More info 0.63 >More info WT control Original data GEO bulk
44 Dark 3day hml 0.50 >More info 0.48 >More info 0h hml Original data
45 4d red light grown hmr-5 seedlings 0.42 >More info 0.56 >More info 4d red light grown WT(Col-0) seedlings Original data
46 Dark 2day wt 0.53 >More info 0.44 >More info 0h wt Original data
47 Col-0 leaf drought 0.73 >More info 0.24 >More info Col-0 leaf water leaf Original data GEO bulk
48 flu dark 8hours/30 minute light 0.42 >More info 0.55 >More info col dark 8hours/30 minute light Original data GEO bulk
49 penta mutant (higher order mutant) 0.43 >More info 0.54 >More info col control (higher order mutant) Original data GEO bulk
50 detached inflorescences 24h 0.35 >More info 0.62 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
51 Osmotic Stress 24 h (shoot) 0.52 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
52 Dark 1day ivd 0.50 >More info 0.46 >More info 0h ivd Original data
53 nhx5-1/nhx6 0.46 >More info 0.50 >More info WT Rosette leaf Original data GEO bulk
54 Leafminer systemically damaged thaliana seedlings 0.39 >More info 0.57 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
55 seedling 1.5h after HZE atm-1 0.31 >More info 0.65 >More info seedling day 1 unirradiated atm-1 1.5h Original data
56 Shoot submergence 24h 0.28 >More info 0.67 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
57 CabpBVR2 0.58 >More info 0.37 >More info WT Original data GEO bulk
58 WT AntimycinA 3h 0.45 >More info 0.50 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
59 hog1-7 -0.54 >More info -0.40 >More info wt whole seedling Original data GEO bulk
60 mutant-line774 -0.54 >More info -0.40 >More info WT-control whole plant Original data GEO bulk
61 48 h S Attim 17-1 1 -0.64 >More info -0.30 >More info 0 h Attim 17-1 1 seed Original data
62 6 h SL WT -0.60 >More info -0.34 >More info 0 h WT seed Original data
63 Shoot dark control 7h 0.30 >More info 0.64 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
64 control leaf (cmt 1d) -0.53 >More info -0.40 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
65 WUS-GR DEX 0.52 >More info 0.41 >More info Mock Dexamethasone Original data GEO bulk
66 rosettes WT drought 0.63 >More info 0.30 >More info rosettes WT watered Original data GEO bulk
67 35S::HRE2 Aerobic 0.42 >More info 0.51 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
68 rosettes drought 0.66 >More info 0.26 >More info rosettes watered Original data GEO bulk
69 4h decapitation -0.28 >More info -0.64 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
70 rpoTmp(line) MLD stressed 0.40 >More info 0.52 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
71 max3GR24 (1 uM) -0.42 >More info -0.50 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
72 aox1a:rpoTmp MLD stressed -0.52 >More info -0.39 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
73 ced1 -0.51 >More info -0.40 >More info WT PEG 6hr seedlings Original data GEO bulk
74 miR 0h 0.50 >More info 0.41 >More info Col 0h Leaf Original data GEO bulk
75 Leafminer damaged seedlings 0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
76 SA 4mM 0.27 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
77 6 h SL Attim 17-1 1 -0.55 >More info -0.34 >More info 0 h Attim 17-1 1 seed Original data
78 HSP90 Reduced RNAi-B1 0.50 >More info 0.39 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
79 whole roots 140 mM NaCl 32 hour 0.63 >More info 0.26 >More info whole roots standard Original data GEO bulk
80 sdg2 -0.37 >More info -0.52 >More info wt seedling Original data GEO bulk
81 0h light (+Lincomycin) -0.39 >More info -0.50 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
82 anac017-2 H2O2 3h -0.59 >More info -0.29 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
83 shoot-10 μM DEX- 6 hr 0.29 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
84 SCR 24hr-S 0.54 >More info 0.33 >More info SCR 0hr endodermis Original data
85 Col-0 red light -0.54 >More info -0.33 >More info Col-0 dark Original data GEO bulk
86 17 2h labelled -0.56 >More info -0.31 >More info 27 1h labelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
87 RRE1 Chitin 0.51 >More info 0.36 >More info Chitin Original data GEO bulk
88 low water potential 0.65 >More info 0.21 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
89 aphid infested 0.21 >More info 0.65 >More info control aphid infested Leaves Original data GEO bulk
90 sfr6 drought -0.15 >More info -0.71 >More info WT drought All aerial tissue Original data GEO bulk
91 aphid infested 0.21 >More info 0.65 >More info CTR Original data GEO bulk
92 Heat shock optimum 0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
93 gpa1-4/agb1-2 clean-air 3h 0.17 >More info 0.68 >More info Col clean-air 3h clean-air Original data GEO bulk
94 gun1-9 norflurazon 0.58 >More info 0.27 >More info gun1-9 control Original data GEO bulk
95 WT Seedling BL+ABA 0.61 >More info 0.24 >More info WT Seedling BL Original data GEO bulk
96 shoot-10 μM DEX- 12 hr 0.23 >More info 0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
97 Lipopolysaccaride4 h (leaf) 0.50 >More info 0.34 >More info Mock 4 h (leaf) Original data Elicitor treatments
98 high-R:FR bud uppermost -0.30 >More info -0.54 >More info low-R:FR bud uppermost high R rosette axillary bud n Original data GEO bulk
99 ABA JA 24h 0.15 >More info 0.69 >More info EtOH 24h 24hr Original data GEO bulk
100 WT hypoxia 0.26 >More info 0.58 >More info WT normoxia whole rosette Original data
101 48 h S WT -0.57 >More info -0.26 >More info 0 h WT seed Original data
102 1 h Light Total RNA -0.17 >More info -0.65 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
103 sfr3 cold 0.30 >More info 0.52 >More info WT cold All aerial tissue Original data GEO bulk
104 3x(p) 0.16 >More info 0.66 >More info 2x two week old seedlings Original data
105 leaf blade in D 0.24 >More info 0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
106 vtc1-1 -0.22 >More info -0.60 >More info Col-0 whole plant Original data GEO bulk
107 Leaf wounded 0.21 >More info 0.61 >More info Leaf control vegetative leaf Original data GEO bulk
108 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.30 >More info 0.51 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
109 A. thaliana-A. halleri hybrid -0.51 >More info -0.29 >More info A. thaliana mature leaves before flowering Original data GEO bulk
110 8h-DC3000 avrRpm1 0.26 >More info 0.54 >More info 8h-DC3000 leaves Original data GEO bulk
111 hai1-2 low water potential 0.29 >More info 0.50 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
112 WT (Col-0) inflorescence drought day 5 0.24 >More info 0.54 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
113 SHR-GR Time 12H Dex -0.21 >More info -0.57 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
114 NAA -AA 0.55 >More info 0.22 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
115 rrd2 IBA -0.50 >More info -0.27 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
116 cat2-long-day 4d -0.50 >More info -0.27 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
117 ex2 flu dark 8hours/30 minute light 0.26 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
118 Mutant lwd1_lwd2 -0.54 >More info -0.21 >More info Wildtype for phy mutants Original data GEO bulk
119 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.54 >More info -0.21 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
120 ptpks2 -0.08 >More info -0.67 >More info Col-WT leaves Original data GEO bulk
121 35S::MBF1c 0.22 >More info 0.53 >More info control Original data GEO bulk
122 WT drought 0.20 >More info 0.55 >More info WT control All aerial tissue Original data GEO bulk
123 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.50 >More info -0.24 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
124 mkk1 24h BTH rep -0.52 >More info -0.22 >More info Col-0 24h BTH rep Original data GEO bulk
125 aphid saliva treated 0.17 >More info 0.57 >More info control aphid saliva treated leaves Original data GEO bulk
126 Myzus persicae saliva 0.17 >More info 0.57 >More info Control Original data GEO bulk
127 bri1-116 0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
128 Kas-1 -Fe 24h -0.17 >More info -0.57 >More info Kas-1 +Fe 24h roots Original data GEO bulk
129 Kas -Fe 24h Roots -0.17 >More info -0.57 >More info Kas +Fe 24h Roots Original data GEO bulk
130 short 17-degree- -0.18 >More info -0.55 >More info control short Original data GEO bulk
131 Col whole leaf 3dpi 0.18 >More info 0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
132 Col-0 C2H4 24h 0.14 >More info 0.59 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
133 vtc2 zygotic embryo 0.21 >More info 0.52 >More info WT zygotic embryo zygotic embryo Original data GEO bulk
134 stn7-1 -0.50 >More info -0.21 >More info Col-0 rosette leaves Original data GEO bulk
135 35S-MIF1 light grown 0.59 >More info 0.12 >More info Light-grown WT control Original data GEO bulk
136 flu 0.21 >More info 0.50 >More info WT Col Original data GEO bulk
137 hyl1 -0.51 >More info -0.19 >More info Col-0 Original data GEO bulk
138 6-trichlorophenoxyacetic acid 3 h 0.19 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
139 tetraploid 0.09 >More info 0.61 >More info diploid Original data GEO bulk
140 seedling 24h after Gamma WT -0.13 >More info -0.57 >More info seedling day 2 unirradiated WT 24h Original data
141 Cocultivation 8 hrs leaf 0.11 >More info 0.59 >More info Mock cocultivation 8 hrs leaf Leaf Original data
142 cat2-2; 0h switch to ambient CO2 concentrations; -0.64 >More info -0.05 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
143 ahg2-1 -0.54 >More info -0.15 >More info WT (Col) control Original data GEO bulk
144 Whole root - low pH 3H 0.16 >More info 0.53 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
145 1 h Light IP RNA -0.04 >More info -0.65 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
146 oas-a1.1 root -0.11 >More info -0.55 >More info WT-Untreated Root Original data GEO bulk
147 cca1-lhy before light 0.10 >More info 0.56 >More info before light whole seedlings Original data GEO bulk
148 rcf1-1 cold 24h 0.13 >More info 0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
149 mkk2 24h BTH rep -0.58 >More info -0.08 >More info Col-0 24h BTH rep Original data GEO bulk
150 3x(m) -0.11 >More info 0.76 >More info 2x two week old seedlings Original data
151 frb1 mutant 0.57 >More info 0.07 >More info WT whole seedling Original data GEO bulk
152 root cells epidermis 140mM NaCl 48 hours 0.51 >More info 0.12 >More info root cells epidermis standard 1 hour root cells epidermis Original data
153 gabaculin 0.08 >More info 0.55 >More info WT Col-0 seedling Original data GEO bulk
154 SIV pollen tube 0.51 >More info 0.11 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
155 nas4x roots + Fe -0.57 >More info -0.05 >More info WT roots + Fe Roots Original data GEO bulk
156 slr-1 2h NAA -0.57 >More info -0.05 >More info Col-0 2h NAA Original data GEO bulk
157 Homozygous-AtcesA4 0.54 >More info 0.08 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
158 Rose Bengal 0.5 uM 0.09 >More info 0.53 >More info Control RB and PER Rose Bengal Original data
159 TNT-seedlings 0.06 >More info 0.55 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
160 shoot-10 μM DEX- 24hr 0.02 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
161 Heat no recovery 0.56 >More info 0.03 >More info Mock no recovery seedling Original data GEO bulk
162 cca1-lhy 30m light 0.08 >More info 0.51 >More info 30m light whole seedlings Original data GEO bulk
163 Homozygous-AtcesA6 0.56 >More info 0.02 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
164 red illumination +lincomycin 0.50 >More info 0.07 >More info red illumination -lincomycin Original data GEO bulk
165 root cells cortex 140mM NaCl 3 hours 0.53 >More info 0.04 >More info root cells cortex standard 1 hour root cells cortex Original data
166 amiR-tor induced 3d 0.58 >More info -0.01 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
167 4C 2h(SOIL) -0.12 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
168 myb3 myb3r4d 0.06 >More info 0.50 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
169 Dark 2day ivd 0.57 >More info -0.01 >More info 0h ivd Original data
170 SHR-GR Time 6H Dex 0.01 >More info -0.55 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
171 Col-0 24hpi A. brassicicola 0.51 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
172 pip3 At2g19270 TDNA 9 -0.03 >More info 0.55 >More info Col-0 whole plant Original data GEO bulk
173 seed germinating in countinuous light 24h SL -0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
174 triploid female excess 0.08 >More info -0.59 >More info tetraploid Original data GEO bulk
175 Day Time Treatment 0.06 >More info -0.57 >More info Day Time Control 1hr white light pulse aerial rosette Original data
176 amiR-tor induced 6d 0.51 >More info -0.01 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
177 Laer pretreat GA Flg22 1h -0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
178 SCR-GR Time 1H Dex -0.10 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
179 xyl-grown cell culture- 1h 1mM Fru 0.06 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
180 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
181 IAA7mII over-expressor IAA Treated -0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
182 tmm1-inflorescence-tips 0.07 >More info -0.50 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
183 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
184 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
185 per1 in Pi deficiency medium -0.56 >More info 0.20 >More info Col in Pi deficiency medium root Original data GEO bulk
186 WT (Col-0) inflorescence well-watered day 10 -0.15 >More info 0.50 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
187 myb61 xylem -0.17 >More info 0.50 >More info wt xylem xylem Original data GEO bulk