4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rrd2 IBA
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List of experiments correlated with "rrd2 IBA"  Help Download transcriptome of top 30
Score Experiment Correlation from
rrd2 IBA		 Correlation to
rrd2 IBA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rrd2 IBA 1.00 >More info 1.00 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
2 SAM SE agl15 agl18 double mutant 0.80 >More info 0.76 >More info SAM SE Col Original data GEO bulk
3 arp6-10 12 ºC -0.77 >More info -0.79 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
4 dark +H2O2 -0.78 >More info -0.75 >More info dark 5 mM H2O2 seedling Original data GEO bulk
5 rid4 IBA 0.78 >More info 0.75 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
6 atmyc2 Seedling Dark 0.75 >More info 0.77 >More info WT Seedling Dark Original data GEO bulk
7 rrd1 IBA 0.76 >More info 0.75 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
8 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.70 >More info 0.73 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
9 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.70 >More info 0.71 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
10 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.68 >More info 0.72 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
11 nNOS-drought 0.72 >More info 0.67 >More info WT-drought leaf Original data
12 root - 08% oxygen - 2h 0.64 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
13 KCl germinant 0.74 >More info 0.63 >More info Millipore Water germinant KCl seedling Original data
14 miR 0h -0.64 >More info -0.66 >More info Col 0h Leaf Original data GEO bulk
15 agb1 gpa1 -ABA LF 0.61 >More info 0.68 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
16 bri1-5 mutant -0.68 >More info -0.60 >More info WT 7 day-old whole seedlings Original data
17 bHLH122 ox -0.65 >More info -0.61 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
18 tbf1-SA 0.63 >More info 0.60 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
19 Nicotinamide-77hr 0.66 >More info 0.57 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
20 3m.KNO3 0.62 >More info 0.60 >More info To. KNO3 14 day old Roots Original data GEO bulk
21 3m.KCl 0.64 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
22 46T-Dry -0.74 >More info -0.46 >More info WT-Dry dehydration treatment 1h Original data
23 gpa1 -ABA LF 0.50 >More info 0.70 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
24 arp6-10 2h 27 -degree-C -0.64 >More info -0.53 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
25 6m.KCl 0.57 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
26 atmyc2 Seedling BL -0.71 >More info -0.45 >More info WT Seedling BL Original data GEO bulk
27 AFB1 0h -0.56 >More info -0.57 >More info Col 0h Leaf Original data GEO bulk
28 SCR 48hr-S -0.51 >More info -0.59 >More info SCR 0hr endodermis Original data
29 agb1 -ABA LF 0.55 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
30 6m.KNO3 0.55 >More info 0.55 >More info To. KNO3 14 day old Roots Original data GEO bulk
31 TiO2 germinant 0.64 >More info 0.45 >More info Millipore Water germinant TiO2 seedling Original data
32 nNOS-control 0.56 >More info 0.53 >More info WT-control leaf Original data
33 dsr1 -0.52 >More info -0.55 >More info WT mock Whole seedling Original data GEO bulk
34 46T-CK -0.71 >More info -0.36 >More info WT-CK none Original data
35 SCR 24hr-S -0.48 >More info -0.59 >More info SCR 0hr endodermis Original data
36 tbf1-mock spray 0.49 >More info 0.54 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
37 gpa1 +ABA LF -0.55 >More info -0.47 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
38 SCR 96hr-S -0.48 >More info -0.54 >More info SCR 0hr endodermis Original data
39 oxt6:AtCPSF30 line -0.55 >More info -0.46 >More info oxt6 mutant Original data GEO bulk
40 roottip hypoxia pSCR -0.43 >More info -0.58 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
41 SCR 72hr-S -0.48 >More info -0.53 >More info SCR 0hr endodermis Original data
42 tunicamycin -0.55 >More info -0.45 >More info DMF Original data GEO bulk
43 dark +lincomycin 0.40 >More info 0.58 >More info dark -lincomycin Original data GEO bulk
44 Col-0 +ABA LF 0.55 >More info 0.42 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
45 atmyc2 cop1 Seedling BL -0.63 >More info -0.34 >More info WT Seedling BL Original data GEO bulk
46 embryo proper linear-cotyledon -0.45 >More info -0.52 >More info whole seeds linear-cotyledon Original data GEO bulk
47 Indigo Carmine 0.5 uM 0.39 >More info 0.58 >More info Control MV and IC Indigo Carmine Original data
48 spx1 spx2 resupplied Pi 4h 0.72 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
49 wrky72-1-NOCO2 INFECTED -0.54 >More info -0.41 >More info WT-NOCO2 INFECTED Original data GEO bulk
50 Red/FR Light45min -0.36 >More info -0.59 >More info FarRed Light 45min Original data Light treatments
51 msg2 -0.56 >More info -0.38 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
52 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
53 atmyc2 Seedling BL+ABA -0.56 >More info -0.34 >More info WT Seedling BL+ABA Original data GEO bulk
54 roottip hypoxia pSHR -0.50 >More info -0.39 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
55 Nicotinamide-85hr 0.52 >More info 0.36 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
56 mkk1 24h BTH rep 0.32 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
57 cop1 Seedling BL -0.62 >More info -0.24 >More info WT Seedling BL Original data GEO bulk
58 Mutant ga1-5 0.57 >More info 0.29 >More info Ler-1 Original data Comparison of plant hormone related mutant
59 light -0.67 >More info -0.18 >More info dark light seedling Original data GEO bulk
60 Van SA 0.61 >More info 0.24 >More info Col-0 SA Original data GEO bulk
61 cat2-2; 8h switch to ambient CO2 concentrations; -0.56 >More info -0.28 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
62 Base wox4 0.53 >More info 0.31 >More info Base Col base of stem Original data GEO bulk
63 Fenclorim 24hr 0.52 >More info 0.31 >More info Acetone 24hr root Original data GEO bulk
64 Red Light 4 h 0.32 >More info 0.51 >More info White Light 4 h Original data Light treatments
65 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
66 OE-HRA1 NS  0.61 >More info 0.21 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
67 tga1 tga4 2h KCl 0.19 >More info 0.62 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
68 cop1 Seedling Dark 0.30 >More info 0.50 >More info WT Seedling Dark Original data GEO bulk
69 tfl1-1-23ºC -0.27 >More info -0.50 >More info WT-23ºC Original data GEO bulk
70 SAM SE 35S:AGL15 0.55 >More info 0.21 >More info SAM SE Col Original data GEO bulk
71 Imbibed 24 h ABA 3uM (seed) 0.21 >More info 0.55 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
72 ARF10 0.52 >More info 0.23 >More info Col-0 Original data GEO bulk
73 OH1 -0.50 >More info -0.25 >More info Col-0 leaves Original data GEO bulk
74 gapcp1gapcp2 ABA 0.22 >More info 0.53 >More info WT ABA ABA seedling Original data GEO bulk
75 cca1-lhy 60m light -0.50 >More info -0.24 >More info 60m light whole seedlings Original data GEO bulk
76 afb3-1 2h KCl -0.51 >More info -0.21 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
77 des1.1 0.52 >More info 0.20 >More info Leaves-WT leaf Original data GEO bulk
78 red illumination +lincomycin -0.51 >More info -0.17 >More info red illumination -lincomycin Original data GEO bulk
79 Dark -0.15 >More info -0.53 >More info Control Original data GEO bulk
80 WT Atum 1h -0.09 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
81 Paclobutrazol 3 h -0.13 >More info -0.53 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
82 Laer pretreat GA Flg22 1h -0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
83 OE-HRA1 2HS  0.55 >More info 0.10 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
84 A1-1 -0.15 >More info -0.50 >More info WT Original data GEO bulk
85 Van 0.50 >More info 0.13 >More info Col-0 Original data GEO bulk
86 pab total -0.57 >More info -0.04 >More info WT total seedling shoot/aerial seedling Original data
87 opr3 OPDA 8 h -0.06 >More info -0.52 >More info opr3 0 h Original data GEO bulk
88 Red Light 45min -0.55 >More info -0.02 >More info White Light 45min Original data Light treatments
89 estradiol induced LEC1 -0.56 >More info 0.00 >More info control Original data GEO bulk
90 Estradiol4 days -0.56 >More info 0.00 >More info Col Original data GEO bulk
91 Shoot apex inflorescence (after bolting) -0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
92 Leafminer damaged seedlings -0.03 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
93 seed germinating in countinuous light 24h SL -0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
94 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
95 ahg3-1 -0.52 >More info 0.04 >More info ABA control Original data GEO bulk
96 Mutant NahG(leaf) 0.50 >More info -0.04 >More info Col-0 (leaf) Original data GEO bulk
97 Col0-PsmES4326-24hpi -0.15 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
98 Heat shock optimum -0.23 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
99 Col BTH -0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk
100 siliques AtHb1 control -0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
101 ahg1-1 -0.33 >More info 0.50 >More info ABA control Original data GEO bulk