4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on cop1 Seedling BL
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List of experiments correlated with "cop1 Seedling BL"  Help Download transcriptome of top 30
Score Experiment Correlation from
cop1 Seedling BL		 Correlation to
cop1 Seedling BL		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 cop1 Seedling BL 1.00 >More info 1.00 >More info WT Seedling BL Original data GEO bulk
2 atmyc2 cop1 Seedling BL 0.94 >More info 0.96 >More info WT Seedling BL Original data GEO bulk
3 cop1 Seedling BL+ABA 0.78 >More info 0.85 >More info WT Seedling BL+ABA Original data GEO bulk
4 ice1 control 0.82 >More info 0.80 >More info WT control Original data GEO bulk
5 ice1 6H Cold 0.80 >More info 0.79 >More info WT 6H Cold Original data GEO bulk
6 csn4-1 mutant 0.79 >More info 0.70 >More info WT dark Original data GEO bulk
7 WT Seedling BL+ABA 0.80 >More info 0.66 >More info WT Seedling BL Original data GEO bulk
8 csn5 (csn5a-2 csn5b) light 0.80 >More info 0.66 >More info WT light Original data GEO bulk
9 csn3-1 light 0.79 >More info 0.66 >More info WT light Original data GEO bulk
10 ice1 3H Cold 0.79 >More info 0.66 >More info WT 3H Cold Original data GEO bulk
11 ice1 24H Cold 0.74 >More info 0.71 >More info WT 24H Cold Original data GEO bulk
12 toc1-1-57hr 0.68 >More info 0.73 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
13 csn3-1 dark 0.77 >More info 0.64 >More info WT dark Original data GEO bulk
14 csn5 (csn5a-2 csn5b) dark 0.73 >More info 0.64 >More info WT dark Original data GEO bulk
15 Mutant gh3.5-1D (AvrRpt2) 0.71 >More info 0.64 >More info Col-0 (AvrRpt2) Original data GEO bulk
16 Mature callus 0.67 >More info 0.67 >More info Young callus hypocotyls Original data GEO bulk
17 B.cinerea 18 h infection 0.69 >More info 0.65 >More info Mock 18 h Original data Botrytis cinerea infection
18 Botrytis cinerea 18h 0.69 >More info 0.65 >More info control 18h Original data GEO bulk
19 Sulfometuron EC50 0.70 >More info 0.64 >More info Carrier Original data GEO bulk
20 smg7b-1 0.69 >More info 0.64 >More info WT whole plant Original data GEO bulk
21 gh3.5-1D 48 hpi 0.67 >More info 0.66 >More info Col-0 uninoculated Original data GEO bulk
22 9 hr Hypoxia 1 hr recovery Total RNA 0.65 >More info 0.65 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
23 DC3000 24h 0.65 >More info 0.65 >More info Mock 24h DC3000 Original data GEO bulk
24 atmyc2 Seedling BL 0.54 >More info 0.74 >More info WT Seedling BL Original data GEO bulk
25 RRE2 Chitin 0.69 >More info 0.59 >More info Chitin Original data GEO bulk
26 Mutant cry1 (High Light) -0.64 >More info -0.63 >More info Col-0 (High Light) Original data GEO bulk
27 upf3 0.64 >More info 0.63 >More info WT whole plant Original data GEO bulk
28 cry1 high light -0.64 >More info -0.63 >More info Col-O high light Original data GEO bulk
29 AFB1 0h 0.56 >More info 0.68 >More info Col 0h Leaf Original data GEO bulk
30 WT 2-4h Xanthomonas 0.59 >More info 0.64 >More info WT T0 Original data GEO bulk
31 R. solani AG2-1 0.63 >More info 0.60 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
32 toc1-1-69hr 0.61 >More info 0.62 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
33 ARR22-ox (t-zeatin 3 h) 0.63 >More info 0.60 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
34 Laer Alternaria 3dpi -0.56 >More info -0.66 >More info Laer Control leaf discs Original data GEO bulk
35 PBZ 0.53 >More info 0.69 >More info none PBZ Rosette Original data GEO bulk
36 AtLysM RLK1 mutant water 0.64 >More info 0.58 >More info WT water Original data GEO bulk
37 Col0-PsmES4326-24hpi 0.61 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
38 sdg2 0.65 >More info 0.56 >More info wt seedling Original data GEO bulk
39 WT-NOCO2 INFECTED 0.63 >More info 0.58 >More info WT-MOCK Original data GEO bulk
40 toc1-1-81hr 0.65 >More info 0.56 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
41 IMI 4mM 0.66 >More info 0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
42 sni1 0.54 >More info 0.66 >More info WT Original data GEO bulk
43 Col ozone 2d 0.67 >More info 0.53 >More info Col clean-air 2d ozone Original data GEO bulk
44 bak1-3 +Pep2 10h 0.63 >More info 0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
45 Lipopolysaccaride4 h (leaf) 0.57 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
46 Mutant axr3-1 0.65 >More info 0.54 >More info Col Original data GEO bulk
47 Starch sheath 5 days MS incubation 0.50 >More info 0.69 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
48 cdpk6-yfp 0.56 >More info 0.63 >More info Kan seedlings Original data GEO bulk
49 9 hr Hypoxia 1 hr recovery IP RNA 0.62 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
50 HopZ1a treated ulp1c ulp1d 0.62 >More info 0.56 >More info col Original data GEO bulk
51 Chitosan 3h Treatment 0.66 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
52 LTN008-2 aza-dc 0.70 >More info 0.48 >More info LTN012-2 Mock Original data
53 edr1 18 h powdery mildew 0.61 >More info 0.57 >More info Col-0 18 h powdery mildew Original data GEO bulk
54 Elevated CO2 AMPLE N NIGHT 0.52 >More info 0.65 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
55 toc1-1-65hr 0.65 >More info 0.52 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
56 AgNO3 3 h 0.60 >More info 0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
57 Col-0-avrB-6h 0.58 >More info 0.59 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
58 ASL9-ox -0.60 >More info -0.57 >More info WT aerial parts of seedlings Original data GEO bulk
59 del1-1 mutant 5d uninfected 0.56 >More info 0.60 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
60 UV 0.60 >More info 0.56 >More info WT aerial region Original data GEO bulk
61 WT 30μM arsenate 8 hours. 0.61 >More info 0.55 >More info WT control (not supplemented). Original data
62 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
63 Imidazolinone EC50 0.57 >More info 0.59 >More info Carrier (Imidazolinone) Original data GEO bulk
64 ceh1 mutant 0.58 >More info 0.58 >More info Parent line Original data
65 Col-0 under 4 days salt 0.63 >More info 0.52 >More info Col-0 under control 4 days salt treatment rosette Original data
66 sfr3 cold 0.50 >More info 0.65 >More info WT cold All aerial tissue Original data GEO bulk
67 CMP 4hr 0.60 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
68 toc1-1-85hr 0.63 >More info 0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
69 lht1 PstDC3000 48h 0.60 >More info 0.55 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
70 Shoot -Cs 0.37 >More info 0.78 >More info Control-shoot Original data GEO bulk
71 RRE1 Chitin 0.64 >More info 0.50 >More info Chitin Original data GEO bulk
72 Heat and anoxia 0.61 >More info 0.53 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
73 SA 4mM 0.63 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
74 6h +Pi -0.48 >More info -0.66 >More info 6h -Pi root Original data GEO bulk
75 lht1 untreated 0.57 >More info 0.57 >More info WT untreated untreated leaf Original data GEO bulk
76 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.55 >More info WT +Pep2 2h Pep2 Original data GEO bulk
77 GR-REV 30min 0.57 >More info 0.55 >More info Col 30min Original data GEO bulk
78 toc1-1-49hr 0.62 >More info 0.50 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
79 aox1a(line) MLD stressed 0.57 >More info 0.55 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
80 Leafminer damaged seedlings 0.55 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
81 CMV-WT 0.61 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
82 Pst-DC3000(avrRpm1)-4hpi 0.53 >More info 0.58 >More info Pst-DC3000-4hpi Original data GEO bulk
83 cpr5 0.62 >More info 0.49 >More info WT(COL) Original data GEO bulk
84 Botrytis cinerea 48h 0.54 >More info 0.57 >More info control 48h Original data GEO bulk
85 upf1 0.54 >More info 0.56 >More info WT whole plant Original data GEO bulk
86 9 hr Hypoxia IP RNA 0.59 >More info 0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
87 SA 0.60 >More info 0.50 >More info WT mock Whole seedling Original data GEO bulk
88 scrm-D 0.55 >More info 0.55 >More info Col-0 WT whole seedling Original data GEO bulk
89 cpr5npr1 0.61 >More info 0.49 >More info WT(COL) Original data GEO bulk
90 35S:RPS4 eds1-2 24h -0.60 >More info -0.50 >More info 35S:RPS4 24h leaves Original data
91 IRP1-OE-Fe--shoot 0.56 >More info 0.54 >More info COL-0-Fe--shoot shoot Original data
92 Anoxia 0.52 >More info 0.58 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
93 hrpA 7h 0.58 >More info 0.52 >More info Mock 7h hrpA Original data GEO bulk
94 Col-0 DCA 48h 0.46 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
95 vte2-1 3d vernalization 0.46 >More info 0.64 >More info WT 3d vernalization Original data GEO bulk
96 Col-O high light 0.53 >More info 0.56 >More info Col-O bule light Original data GEO bulk
97 BLM+INA 0.55 >More info 0.54 >More info CK BLM and INA seedling Original data
98 Triazolopyrimidine EC50 0.54 >More info 0.55 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
99 penta Alternaria 3dpi 0.64 >More info 0.45 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
100 JA 0.50 >More info 0.59 >More info Col-0 mock Whole seedling Original data GEO bulk
101 plant (tga2-5-6) 4h phytoprostane A1 0.58 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
102 sfr3 control 0.61 >More info 0.48 >More info WT control All aerial tissue Original data GEO bulk
103 CMP 24hr 0.61 >More info 0.48 >More info Acetone 24hr root Original data GEO bulk
104 HopZ1a treated 0.61 >More info 0.48 >More info col Original data GEO bulk
105 SLWF infested 0.59 >More info 0.50 >More info SLWF uninfested rosette tissue Original data GEO bulk
106 pnp1-1 1wk +P 0.49 >More info 0.60 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
107 hira-root -0.57 >More info -0.51 >More info WT-root root Original data
108 bri1-116 0.35 >More info 0.73 >More info Col seedling Original data GEO bulk
109 Nicotinamide-81hr 0.57 >More info 0.50 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
110 Mutant nph4-1_arf19-1 0.58 >More info 0.48 >More info Col Original data GEO bulk
111 CMV-A2b mutant 0.51 >More info 0.55 >More info Mock-At Aerial tissues Original data GEO bulk
112 albino Ds13-2198-1 -0.51 >More info -0.54 >More info control Original data GEO bulk
113 root Dosed gold 0.56 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
114 9 hr Hypoxia Total RNA 0.54 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
115 0.125 mM gold 24 h 0.56 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
116 R. solani AG8 0.45 >More info 0.60 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
117 JA 3h 0.31 >More info 0.74 >More info EtOH 3h 3hr Original data GEO bulk
118 Mutant axr3-1 (IAA) 0.54 >More info 0.50 >More info Col (IAA) Original data GEO bulk
119 Primisulfuron EC50 0.54 >More info 0.50 >More info Carrier (primisulfuron) Original data GEO bulk
120 Root -Cs 0.52 >More info 0.52 >More info Control-root Original data GEO bulk
121 toc1-1-77hr 0.66 >More info 0.38 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
122 pepr1-1 Pepr2-3 +Pep2 10h -0.54 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
123 24h +Pi -0.59 >More info -0.45 >More info 24h -Pi root Original data GEO bulk
124 Glyphosate EC50 0.56 >More info 0.48 >More info Carrier (Glyphosate) Original data GEO bulk
125 OH1 0.55 >More info 0.49 >More info Col-0 leaves Original data GEO bulk
126 csn4-1 dark 0.64 >More info 0.40 >More info WT light Original data GEO bulk
127 Nicotinamide-57hr 0.58 >More info 0.46 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
128 toc1-1-53hr 0.56 >More info 0.48 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
129 Methyl Jasmonate 1 h 0.46 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
130 WT 3h -P 0.40 >More info 0.64 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
131 amiR-tor induced 3d 0.42 >More info 0.62 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
132 seedlings +5AC 0.64 >More info 0.39 >More info control seedlings 10-day old whole seedling Original data GEO bulk
133 smg5-2 0.53 >More info 0.50 >More info WT whole plant Original data GEO bulk
134 WT-SA 0.52 >More info 0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
135 GST 4 h (leaf) 0.53 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
136 Salt Stress 24 h (root) 0.60 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
137 Atwrky63 -0.51 >More info -0.51 >More info Col0 none leaf Original data GEO bulk
138 pnp1-1 3h +P 0.51 >More info 0.51 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
139 DFPM 0.54 >More info 0.48 >More info control Original data GEO bulk
140 WT chitooctaose 0.61 >More info 0.41 >More info WT water Original data GEO bulk
141 8h-DC3000 avrRpm1 0.51 >More info 0.51 >More info 8h-DC3000 leaves Original data GEO bulk
142 ubc13A -Fe -0.50 >More info -0.52 >More info Col -Fe root Original data GEO bulk
143 Propiconazole 3 h 0.44 >More info 0.58 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
144 miR 0h 0.34 >More info 0.68 >More info Col 0h Leaf Original data GEO bulk
145 CAX1/CAX3 mutant 0.49 >More info 0.53 >More info Col whole plant Original data GEO bulk
146 amiR-tor induced 6d 0.39 >More info 0.63 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
147 Col-0 INA 48h 0.53 >More info 0.48 >More info Col-0 MOCK 48h Original data GEO bulk
148 Pto inoculated 0.55 >More info 0.46 >More info col Original data GEO bulk
149 toc1-1-73hr 0.56 >More info 0.45 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
150 Selenate (shoot) 0.41 >More info 0.60 >More info Ws (shoot) Original data GEO bulk
151 erf104-ko H2O 4h 0.38 >More info 0.63 >More info Col-0 H2O 4h Original data GEO bulk
152 WT Atum 1h 0.40 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
153 arp6-10 12 ºC 0.34 >More info 0.67 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
154 Shoot Selenate 0.41 >More info 0.60 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
155 toc1-1-61hr 0.63 >More info 0.37 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
156 Mutant ga1-5 -0.41 >More info -0.59 >More info Ler-1 Original data Comparison of plant hormone related mutant
157 oas-a1.1 Cd 18h 0.39 >More info 0.61 >More info Cd 18h root Root Original data GEO bulk
158 Transgenic LEC2GR Seedling 1h Dex 0.47 >More info 0.53 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
159 BLM 0.49 >More info 0.51 >More info CK BLM seedling Original data
160 flu 0.52 >More info 0.47 >More info WT Col Original data GEO bulk
161 anac017-2 AntimycinA 3h -0.59 >More info -0.40 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
162 Cycloheximide 3 h 0.56 >More info 0.43 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
163 des1 water 0.55 >More info 0.44 >More info WT water water leaf Original data GEO bulk
164 ARR21C-ox 0.62 >More info 0.37 >More info Col-0 Original data ARR21C overexpression
165 FarRed Light 4 h 0.36 >More info 0.63 >More info White Light 4 h Original data Light treatments
166 root epidermis and lateral root cap pH4.6 0.46 >More info 0.53 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
167 sfr6 control -0.48 >More info -0.51 >More info WT control All aerial tissue Original data GEO bulk
168 plant (Col-0) 4h OPDA 0.51 >More info 0.47 >More info plant (Col-0) 4h control Original data GEO bulk
169 plant (tga2-5-6) 4h OPDA 0.55 >More info 0.43 >More info plant (tga2-5-6) 4h control Original data GEO bulk
170 OPDA 4 h 0.51 >More info 0.47 >More info Col-0 Original data GEO bulk
171 4d red light grown hmr-5 seedlings 0.54 >More info 0.44 >More info 4d red light grown WT(Col-0) seedlings Original data
172 RPL18 TuMV inoculated total RNA 0.48 >More info 0.50 >More info mock inoculated total RNA PO Original data GEO bulk
173 KCl germinant -0.41 >More info -0.57 >More info Millipore Water germinant KCl seedling Original data
174 cpr5scv1 0.58 >More info 0.39 >More info WT(COL) Original data GEO bulk
175 shoots bhlh100/101 0uM Fe 0.58 >More info 0.39 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
176 Nicotinamide-61hr 0.55 >More info 0.42 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
177 Nicotinamide-65hr 0.50 >More info 0.47 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
178 bZIP1ko mutant N+Light- 0.54 >More info 0.43 >More info WT-sib N+Light- whole plant Original data GEO bulk
179 aba2 1% sucrose 12-day-old -0.42 >More info -0.55 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
180 inhibitor A Treated 0.44 >More info 0.53 >More info Negative Control Original data GEO bulk
181 dicamba 0.51 >More info 0.45 >More info WT mock whole seedling Original data GEO bulk
182 Dark 40 min pls UV-A 5 min 0.43 >More info 0.53 >More info Dark 45 min Original data Light treatments
183 Col whole leaf 5dpi 0.46 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
184 Leafminer locally damaged thaliana seedlings 0.55 >More info 0.40 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
185 gun1gun5 far-red pretreated -0.39 >More info -0.56 >More info WT far-red pretreated Original data GEO bulk
186 Elevated CO2 fully expanded leaf 0.51 >More info 0.44 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
187 Phytoprostane A1 4 h 0.52 >More info 0.43 >More info Col-0 Original data GEO bulk
188 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.43 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
189 hy5 low light -0.54 >More info -0.41 >More info Col-O low light Original data GEO bulk
190 Mutant hy5 -0.54 >More info -0.41 >More info Col-0 Original data GEO bulk
191 Methyl Jasmonate 3 h 0.36 >More info 0.59 >More info Mock 3 h Original data Basic hormone treatment of seedlings
192 etiolated cop1BBX22-GFPox 0.41 >More info 0.54 >More info etiolated Col-0 whole seedlings Original data GEO bulk
193 current injection 0.37 >More info 0.58 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
194 atmyc2 Seedling Dark -0.38 >More info -0.56 >More info WT Seedling Dark Original data GEO bulk
195 Myzus persicae saliva 0.58 >More info 0.36 >More info Control Original data GEO bulk
196 aphid saliva treated 0.58 >More info 0.36 >More info control aphid saliva treated leaves Original data GEO bulk
197 Fenclorim 4hr 0.51 >More info 0.43 >More info Acetone 4hr root Original data GEO bulk
198 35S::ERF104 H2O 4h 0.43 >More info 0.51 >More info Col-0 H2O 4h Original data GEO bulk
199 cngc4 0.51 >More info 0.42 >More info Ws-2 Seedlings Original data GEO bulk
200 Col in Pi deficiency medium 0.35 >More info 0.58 >More info Col in control medium root Original data GEO bulk
201 Nicotinamide-49hr 0.41 >More info 0.52 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
202 npr1-1 SA -0.54 >More info -0.38 >More info Col-0 SA complete seedling Original data
203 8-DAC chr11-1chr17-1 0.52 >More info 0.40 >More info 8-DAC Col-0 leaf explants Original data
204 toc1-1-89hr 0.56 >More info 0.36 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
205 mkk1/mkk2 24h BTH rep 0.53 >More info 0.39 >More info Col-0 24h BTH rep Original data GEO bulk
206 sta1 0.62 >More info 0.30 >More info WT Original data GEO bulk
207 shoot-10 μM DEX- 6 hr 0.51 >More info 0.41 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
208 WT +Pep2 2h 0.57 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
209 pvip1 pvip2 0.51 >More info 0.41 >More info Col-0 whole rosettes Original data GEO bulk
210 Red/FR Light 4 h -0.30 >More info -0.62 >More info FarRed Light 4 h Original data Light treatments
211 rosette Dark Wounded 0.41 >More info 0.51 >More info rosette Dark Control Original data GEO bulk
212 WT 90-105 min Xanthomonas 0.42 >More info 0.50 >More info WT T0 Original data GEO bulk
213 Osmotic Stress 24 h (shoot) 0.53 >More info 0.38 >More info Stress mock 24 h (shoot) Original data Stress treatments
214 rosette leaves lcr 0.39 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
215 Col-0 wt Hypoxic 0.37 >More info 0.54 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
216 Blue Light 4 h 0.34 >More info 0.57 >More info White Light 4 h Original data Light treatments
217 Col-0 48 hpi 0.41 >More info 0.50 >More info Col-0 uninoculated Original data GEO bulk
218 GA3 3 h (ga1) -0.34 >More info -0.56 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
219 AvrRpt2 Col-0 6hpi 0.50 >More info 0.40 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
220 atmospheric CO2 high Mg shoot 0.55 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
221 det2 light-dark -0.40 >More info -0.50 >More info det2 light light-dark Original data GEO bulk
222 ABA DFPM 0.56 >More info 0.33 >More info control Original data GEO bulk
223 AtGATA2ox 0.56 >More info 0.33 >More info Col seedling Original data GEO bulk
224 CLO 4mM 0.61 >More info 0.28 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
225 anac017-2 H2O2 3h -0.50 >More info -0.39 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
226 WT AntimycinA 3h 0.51 >More info 0.38 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
227 swn-7 -0.59 >More info -0.30 >More info Col whole plant Original data GEO bulk
228 Osmotic Stress 24 h (root) 0.60 >More info 0.29 >More info Stress mock 24 h (root) Original data Stress treatments
229 rsa3-1 Na 24h 0.32 >More info 0.56 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
230 Stem tissue 2 days NAA 0.28 >More info 0.60 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
231 safener treated 0.35 >More info 0.53 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
232 myb3 myb3r4d 0.25 >More info 0.63 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
233 treated group 0.59 >More info 0.29 >More info Control group Original data
234 IAA7mII over-expressor IAA Treated 0.19 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
235 Light 0.5h polysome-bound 0.31 >More info 0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
236 NJ15 0.30 >More info 0.58 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
237 E.coli TUV86 2 fliC 7h 0.51 >More info 0.36 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
238 20d after anthesis 0.51 >More info 0.36 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
239 msh1 recA3 untreated 0.31 >More info 0.55 >More info WT untreated above-ground parts Original data GEO bulk
240 cat2-2; 8h switch to ambient CO2 concentrations; 0.59 >More info 0.27 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
241 phyB Rc50 0.51 >More info 0.35 >More info WT(Ler) Rc50 Original data GEO bulk
242 Mutant siz1-3 (Drought) 0.51 >More info 0.35 >More info Col-0 (Drought) Original data GEO bulk
243 siz1-3 drought 0.51 >More info 0.35 >More info Col-0 drought Original data GEO bulk
244 rrd2 IBA -0.24 >More info -0.62 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
245 pho1 0.52 >More info 0.33 >More info Col2WT Original data GEO bulk
246 SAM SE agl15 agl18 double mutant -0.30 >More info -0.55 >More info SAM SE Col Original data GEO bulk
247 root - 04% oxygen - 2h 0.14 >More info 0.71 >More info root - 21% oxygen - 2h Original data GEO bulk
248 Heat shock optimum 0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
249 FarRed Light 45min -0.11 >More info -0.72 >More info White Light 45min Original data Light treatments
250 A. thaliana-A. lyrata hybrid -0.50 >More info -0.32 >More info A. thaliana mature leaves before flowering Original data GEO bulk
251 agb1 gpa1 -ABA LF -0.19 >More info -0.63 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
252 prors1-2 leaves 0.29 >More info 0.53 >More info Col-0 leaves leaves Original data
253 Stem tissue 5 days NAA 0.25 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
254 ein5-1 ski2-3 0.51 >More info 0.30 >More info Col-0 aerial tissue Original data
255 P.p 30hai 0.51 >More info 0.30 >More info At-Control roots Original data GEO bulk
256 long 17-degree- 0.29 >More info 0.52 >More info control long Original data GEO bulk
257 mkk1 control rep -0.30 >More info -0.51 >More info Col-0 Time 0 rep Original data GEO bulk
258 siliques AtHb1 control 0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
259 seedling 24h after HZE WT 0.31 >More info 0.50 >More info seedling day 2 unirradiated WT 24h Original data
260 GR-REV 120min 0.52 >More info 0.28 >More info Col 120min Original data GEO bulk
261 Ba1 UV 0.28 >More info 0.52 >More info Ba1 mock UV seedling Original data
262 SCR 48hr-S 0.29 >More info 0.51 >More info SCR 0hr endodermis Original data
263 gpa1 -ABA LF -0.11 >More info -0.69 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
264 Ws-2 high light 0.26 >More info 0.53 >More info Ws-2 low light Original data GEO bulk
265 sfr6 cold 0.12 >More info 0.67 >More info WT cold All aerial tissue Original data GEO bulk
266 Col0 roots 2hr KNO3 nitrogen -0.05 >More info -0.74 >More info Col0 roots 2hr KCl control root Original data GEO bulk
267 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.17 >More info -0.62 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
268 wnk8-1 untreated -0.27 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
269 PNO8 3 h 0.51 >More info 0.26 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
270 hrpA fliC 7h 0.58 >More info 0.19 >More info Mock 7h hrpA fliC Original data GEO bulk
271 high R/FR JA spray 0.26 >More info 0.51 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
272 tetraploid -0.23 >More info -0.54 >More info diploid Original data GEO bulk
273 Light 0.5h steady-state 0.22 >More info 0.54 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
274 Leaf wounded 0.21 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
275 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.15 >More info -0.61 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
276 downy mildew cotyledons late stage 0.51 >More info 0.24 >More info mock inoculated Cotyledons Original data GEO bulk
277 CHS-silenced type -0.62 >More info -0.13 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
278 Dark 44min pls RedLigh 1min 0.25 >More info 0.50 >More info Dark 45 min Original data Light treatments
279 P.p 6hai 0.52 >More info 0.22 >More info At-Control roots Original data GEO bulk
280 E.coli 0157 H7 7h 0.53 >More info 0.21 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
281 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
282 gapcp1gapcp2 ABA -0.18 >More info -0.54 >More info WT ABA ABA seedling Original data GEO bulk
283 scl3 0.51 >More info 0.19 >More info Col-0 whole root Original data GEO bulk
284 Col-0 24hpi A. brassicicola 0.67 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
285 SA Treated 0.61 >More info 0.08 >More info Water Original data GEO bulk
286 Red Light 4 h -0.10 >More info -0.59 >More info White Light 4 h Original data Light treatments
287 arp6-10 2h 27 -degree-C 0.18 >More info 0.51 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
288 mkk1 24h BTH rep -0.07 >More info -0.61 >More info Col-0 24h BTH rep Original data GEO bulk
289 L2.5 mutant -0.16 >More info -0.50 >More info Wt Original data GEO bulk
290 Laer pretreat GA Flg22 1h -0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
291 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.08 >More info -0.57 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
292 Red/FR Light45min 0.05 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
293 Pst-DC3000(hrpA)-4hpi -0.11 >More info -0.50 >More info Pst-DC3000-4hpi Original data GEO bulk
294 vte2 leaves 120h LT 0.56 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
295 seed germinating in countinuous light 24h SL -0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
296 35S-MIF1 light grown 0.50 >More info 0.08 >More info Light-grown WT control Original data GEO bulk
297 Paclobutrazol 3 h 0.01 >More info 0.57 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
298 Inflorescences Trp1 0.08 >More info 0.50 >More info Inflorescences ler inflorescences Original data GEO bulk
299 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
300 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
301 Col PSTDC3000 24h 0.63 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
302 tt4 UV 0.09 >More info -0.59 >More info UV aerial region Original data GEO bulk
303 HairpinZ 4 h (leaf) 0.50 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments