4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT 30μM arsenate 8 hours.
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List of experiments correlated with "WT 30μM arsenate 8 hours."  Help Download transcriptome of top 30
Score Experiment Correlation from
WT 30μM arsenate 8 hours.		 Correlation to
WT 30μM arsenate 8 hours.		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT 30μM arsenate 8 hours. 1.00 >More info 1.00 >More info WT control (not supplemented). Original data
2 plant (tga2-5-6) 4h phytoprostane A1 0.77 >More info 0.85 >More info plant (tga2-5-6) 4h control Original data GEO bulk
3 (Col-0)+200 uM As 0.77 >More info 0.79 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
4 WT-16ºC -0.76 >More info -0.75 >More info WT-23ºC Original data GEO bulk
5 inhibitor A Treated 0.73 >More info 0.78 >More info Negative Control Original data GEO bulk
6 Col-0 low oxygen 0.73 >More info 0.76 >More info Col-0 control low oxygen root Original data GEO bulk
7 (Col-0)+100 uM As 0.74 >More info 0.75 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
8 Phytoprostane A1 4 h 0.68 >More info 0.79 >More info Col-0 Original data GEO bulk
9 R. solani AG8 0.71 >More info 0.76 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
10 9 hr Hypoxia 1 hr recovery Total RNA 0.76 >More info 0.70 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
11 Ws HS 0.65 >More info 0.80 >More info Ws control heat shocked seedling Original data GEO bulk
12 Heat and anoxia 0.67 >More info 0.77 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
13 WT+H2O2 0.66 >More info 0.77 >More info WT H2O2 Original data GEO bulk
14 IAA/inhibitor A Treated 0.74 >More info 0.69 >More info IAA Treated Original data GEO bulk
15 Col-0 37C 0.70 >More info 0.73 >More info Col-0 22C Original data GEO bulk
16 Col-0 HS 0.60 >More info 0.83 >More info Col-0 control heat shocked seedling Original data GEO bulk
17 WT (Col-0) heat shock 0.60 >More info 0.83 >More info WT (Col-0) whole seedling Original data GEO bulk
18 AgNO3 3 h 0.63 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
19 Anoxia 0.67 >More info 0.75 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
20 Cocultivation 8 hrs root 0.65 >More info 0.77 >More info Mock cocultivation 8 hrs root Root Original data
21 dicamba 0.72 >More info 0.69 >More info WT mock whole seedling Original data GEO bulk
22 bak1-3 +Pep2 10h 0.68 >More info 0.72 >More info WT +Pep2 10h Pep2 Original data GEO bulk
23 IAA/inhibitor B Treated 0.65 >More info 0.75 >More info IAA Treated Original data GEO bulk
24 Seedling-HeatStressed TOTALmRNA 0.65 >More info 0.75 >More info Seedling-control TOTALmRNA seedling Original data
25 P.p 6hai 0.67 >More info 0.71 >More info At-Control roots Original data GEO bulk
26 CMP 4hr 0.66 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
27 oligomycin 4 h 0.65 >More info 0.72 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
28 root Dosed gold 0.65 >More info 0.72 >More info root No gold .125 mM gold 24 h roots Original data
29 toc1-1-73hr 0.63 >More info 0.74 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
30 seedlings-week-old RECA1-overexpressing
transgenic		 0.63 >More info 0.74 >More info seedlings-week-old Col-0 seedlings Original data
31 inhibitor B Treated 0.61 >More info 0.76 >More info Negative Control Original data GEO bulk
32 0.125 mM gold 24 h 0.65 >More info 0.72 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
33 WT seedlings MV 0.66 >More info 0.70 >More info WT seedlings control Seedlings Original data GEO bulk
34 SA 0.66 >More info 0.70 >More info WT mock Whole seedling Original data GEO bulk
35 9 hr Hypoxia Total RNA 0.74 >More info 0.61 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
36 Seedling-HeatStressed POLYSOMESmRNA 0.62 >More info 0.73 >More info Seedling-control POLYSOMESmRNA seedling Original data
37 5-Triiodobenzoic acid3 h 0.60 >More info 0.75 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
38 toc1-1-85hr 0.59 >More info 0.75 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
39 TNT-seedlings 0.57 >More info 0.77 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
40 P.p 30hai 0.69 >More info 0.65 >More info At-Control roots Original data GEO bulk
41 toc1-1-57hr 0.62 >More info 0.72 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
42 6h +Pi -0.62 >More info -0.72 >More info 6h -Pi root Original data GEO bulk
43 WT H2O2 3h 0.63 >More info 0.70 >More info WT water 3h 3h_H2O2 Original data GEO bulk
44 toc1-1-53hr 0.58 >More info 0.75 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
45 oligomycin 1 h 0.55 >More info 0.77 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
46 toc1-1-81hr 0.62 >More info 0.70 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
47 NJ15 0.49 >More info 0.83 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
48 bbx24 in Simulated Shade -0.68 >More info -0.63 >More info WT in simulated shade shade seedling Original data
49 hira-root -0.64 >More info -0.67 >More info WT-root root Original data
50 flu 0.62 >More info 0.68 >More info WT Col Original data GEO bulk
51 dark-hs 0.54 >More info 0.76 >More info dark-control seedling Original data
52 phr1 Shoot-Pi 0.70 >More info 0.59 >More info WT Root-Pi shoots Original data GEO bulk
53 pepr1-1 Pepr2-3 +Pep2 10h -0.60 >More info -0.69 >More info WT +Pep2 10h Pep2 Original data GEO bulk
54 protoplasted roots pH4.6 0.63 >More info 0.66 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
55 P.p 2.5hai 0.63 >More info 0.65 >More info At-Control roots Original data GEO bulk
56 gai Control 0.69 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
57 Heat 0.56 >More info 0.71 >More info Control 90 minutes at 38°C. Original data GEO bulk
58 Salt Stress 24 h (root) 0.62 >More info 0.65 >More info Stress mock 24 h (root) Original data Stress treatments
59 P.p 10.5hai 0.58 >More info 0.68 >More info At-Control roots Original data GEO bulk
60 anac017-2 AntimycinA 3h -0.65 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
61 Whole root - low pH 12H 0.52 >More info 0.74 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
62 WT AntimycinA 3h 0.60 >More info 0.66 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
63 R. solani AG2-1 0.55 >More info 0.70 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
64 pepr1-1 Pepr2-3 +Pep2 2h -0.54 >More info -0.71 >More info WT +Pep2 2h Pep2 Original data GEO bulk
65 DFPM 0.60 >More info 0.65 >More info control Original data GEO bulk
66 9 hr Hypoxia 1 hr recovery IP RNA 0.68 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
67 flu over-tAPX 0.57 >More info 0.68 >More info WT Col Original data GEO bulk
68 (Ws-2)+100 uM As 0.61 >More info 0.63 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
69 cell culture 4 h phytoprostane A1 0.59 >More info 0.65 >More info cell culture 4 h control Original data GEO bulk
70 toc1-1-65hr 0.55 >More info 0.67 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
71 BLM+INA 0.57 >More info 0.65 >More info CK BLM and INA seedling Original data
72 Rose Bengal 0.5 uM 0.48 >More info 0.74 >More info Control RB and PER Rose Bengal Original data
73 safener treated 0.56 >More info 0.65 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
74 whole roots 140 mM NaCl 1 hour 0.66 >More info 0.54 >More info whole roots standard Original data GEO bulk
75 Cycloheximide 3 h 0.53 >More info 0.67 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
76 plant (Col-0) 4h phytoprostane A1 0.57 >More info 0.63 >More info plant (tga2-5-6) 4h control Original data GEO bulk
77 Roots Cd -0.63 >More info -0.56 >More info Roots control Cd Root Original data GEO bulk
78 IMI 4mM 0.61 >More info 0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
79 root protoplasts 40 mM NaCl 0.50 >More info 0.68 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
80 cat2-short-day 2d 0.54 >More info 0.64 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
81 Nicotinamide-57hr 0.57 >More info 0.61 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
82 35S::PI ap3-3 35S::AP-GR +DEX 0.43 >More info 0.75 >More info 0hr DEX Original data GEO bulk
83 toc1-1-49hr 0.57 >More info 0.60 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
84 Root dark control 24h 0.56 >More info 0.61 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
85 coi1-2 0.54 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
86 9 hr Hypoxia IP RNA 0.65 >More info 0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
87 toc1-1-77hr 0.56 >More info 0.60 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
88 2 hr Hypoxia Total RNA 0.65 >More info 0.51 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
89 Col-0 9 hpi A. brassicicola 0.51 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
90 9m.KCl 0.51 >More info 0.65 >More info To. KCl 14 day old Roots Original data GEO bulk
91 cop1 Seedling BL 0.55 >More info 0.61 >More info WT Seedling BL Original data GEO bulk
92 gun1gun5 far-red pretreated -0.49 >More info -0.67 >More info WT far-red pretreated Original data GEO bulk
93 Col-0 flu HL 3h 0.57 >More info 0.59 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
94 root stele 40 mM NaCls 0.58 >More info 0.58 >More info root stele Original data GEO bulk
95 anac017-2 water 3h 0.50 >More info 0.65 >More info WT water 3h 3h_water Original data GEO bulk
96 CMP 24hr 0.55 >More info 0.60 >More info Acetone 24hr root Original data GEO bulk
97 cngc4 0.55 >More info 0.59 >More info Ws-2 Seedlings Original data GEO bulk
98 15m.KCl 0.48 >More info 0.66 >More info To. KCl 14 day old Roots Original data GEO bulk
99 seedlings +5AC 0.61 >More info 0.52 >More info control seedlings 10-day old whole seedling Original data GEO bulk
100 Osmotic Stress 24 h (root) 0.59 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
101 Selenate (root) 0.48 >More info 0.65 >More info Ws (root) Original data GEO bulk
102 Root Selenate 0.48 >More info 0.65 >More info Root control 40 micromolar selenate Root Original data GEO bulk
103 Col-0 Root 100 mM ATP 30 min 0.51 >More info 0.61 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
104 BLM 0.54 >More info 0.58 >More info CK BLM seedling Original data
105 root columella root cap 40 mM NaCl 0.57 >More info 0.55 >More info root columella root cap Original data GEO bulk
106 spch 0.57 >More info 0.55 >More info Col-0 WT whole seedling Original data GEO bulk
107 roottip hypoxia total 0.57 >More info 0.55 >More info roottip control total Original data GEO bulk
108 Protoplast Induced 0.44 >More info 0.68 >More info Uninduced Original data GEO bulk
109 chito-tetramer 0.49 >More info 0.63 >More info Col Mock Original data GEO bulk
110 Laer treat paclobutrazol (PAC) 0.62 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
111 rcf1-1 cold 24h 0.50 >More info 0.60 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
112 Root submergence 24h 0.52 >More info 0.58 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
113 root hypoxia total 0.59 >More info 0.51 >More info root control total Original data GEO bulk
114 Hydrogen Peroxide 500 uM 0.51 >More info 0.59 >More info Control RB and PER Hydrogen Peroxide Original data
115 ARR22-ox (t-zeatin 3 h) 0.48 >More info 0.62 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
116 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
117 Sulfometuron EC50 0.47 >More info 0.63 >More info Carrier Original data GEO bulk
118 cat2-2; 8h switch to ambient CO2 concentrations; 0.40 >More info 0.70 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
119 3x(m) 0.45 >More info 0.64 >More info 2x two week old seedlings Original data
120 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.51 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
121 8hr-pH4.5 0.40 >More info 0.69 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
122 Col-0 under 4 days salt 0.54 >More info 0.54 >More info Col-0 under control 4 days salt treatment rosette Original data
123 WT 2-4h Xanthomonas 0.56 >More info 0.52 >More info WT T0 Original data GEO bulk
124 Nicotinamide-61hr 0.56 >More info 0.52 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
125 Mutant siz1-3 (Drought) 0.52 >More info 0.56 >More info Col-0 (Drought) Original data GEO bulk
126 siz1-3 drought 0.52 >More info 0.56 >More info Col-0 drought Original data GEO bulk
127 Col0-PsmES4326-24hpi 0.47 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
128 Fenclorim 4hr 0.49 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
129 sid2-2 9 hpi A. brassicicola 0.47 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
130 ein2-1 9 hpi A. brassicicola 0.43 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
131 Nicotinamide-81hr 0.55 >More info 0.52 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
132 Root dark control 7h 0.51 >More info 0.56 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
133 Col-0 wt Hypoxic 0.57 >More info 0.50 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
134 35S:RPS4 eds1-2 8h -0.47 >More info -0.60 >More info 35S:RPS4 8h leaves Original data
135 atmyc2 cop1 Seedling Dark 0.58 >More info 0.48 >More info WT Seedling Dark Original data GEO bulk
136 Col upon hypoxia 6 hrs 0.56 >More info 0.50 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
137 iae1 -0.50 >More info -0.56 >More info B179 Original data GEO bulk
138 GST 4 h (leaf) 0.53 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
139 ataf1-1 mutant Col-0 Bgh inoculated 0.46 >More info 0.60 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
140 1h +Pi -0.47 >More info -0.59 >More info 1h -Pi root Original data GEO bulk
141 Triazolopyrimidine EC50 0.45 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
142 CeO2 germinant -0.39 >More info -0.67 >More info Millipore Water germinant CeO2 seedling Original data
143 efr-1 +elf18 10h -0.53 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
144 low CO2 + light 0.40 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
145 Col ozone 3h 0.38 >More info 0.67 >More info Col clean-air 3h ozone Original data GEO bulk
146 S58-2 0.33 >More info 0.72 >More info wt Original data GEO bulk
147 shoots bhlh100/101 0uM Fe 0.61 >More info 0.43 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
148 whole roots 140 mM NaCl 30 minutes 0.59 >More info 0.45 >More info whole roots standard Original data GEO bulk
149 plant (Col-0) 4h OPDA 0.56 >More info 0.48 >More info plant (Col-0) 4h control Original data GEO bulk
150 OPDA 4 h 0.56 >More info 0.48 >More info Col-0 Original data GEO bulk
151 root cells columella root cap -Fe 0.55 >More info 0.49 >More info whole roots standard Original data GEO bulk
152 Primisulfuron EC50 0.46 >More info 0.58 >More info Carrier (primisulfuron) Original data GEO bulk
153 Elevated CO2 AMPLE N NIGHT 0.40 >More info 0.64 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
154 roots bhlh100/101 0uM Fe 0.51 >More info 0.52 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
155 QK HS 0.52 >More info 0.51 >More info QK control heat shocked seedling Original data GEO bulk
156 root endodermis and quiescent center 40 mM NaCl 0.59 >More info 0.44 >More info root endodermis and quiescent center Original data GEO bulk
157 WT Col-0 Bgh inoculated 0.46 >More info 0.57 >More info WT Col-0 Un-inoculated Original data GEO bulk
158 Col-0 C2H4 24h 0.46 >More info 0.57 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
159 DUO1 induced 24h 0.48 >More info 0.55 >More info 24hr-not-induced whole plant Original data GEO bulk
160 Col-Luc WT 3h antimycin A 0.44 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
161 FLIGHT TAGESB plate6 ROOTS 0.48 >More info 0.55 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
162 RRE2 Chitin 0.62 >More info 0.40 >More info Chitin Original data GEO bulk
163 Col-0 2HS 0.57 >More info 0.45 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
164 plant (tga2-5-6) 4h OPDA 0.59 >More info 0.43 >More info plant (tga2-5-6) 4h control Original data GEO bulk
165 sfr6 drought -0.39 >More info -0.63 >More info WT drought All aerial tissue Original data GEO bulk
166 AFB1 0h 0.52 >More info 0.49 >More info Col 0h Leaf Original data GEO bulk
167 root columella root cap pH4.6 0.52 >More info 0.49 >More info root columella root cap pH5.7 Original data GEO bulk
168 +1.6 mM Tween 20 1 h. 0.57 >More info 0.44 >More info +distilled water 1 h. Original data GEO bulk
169 WT flg22 2h 0.56 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
170 GST NPP1 4 h (leaf) 0.47 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
171 Nicotinamide-53hr 0.46 >More info 0.55 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
172 Col-0 0h NAA 0.45 >More info 0.56 >More info Col-0 6h MOCK Original data GEO bulk
173 atmyc2 cop1 Seedling BL 0.48 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
174 seedling 6h after HZE WT 0.51 >More info 0.49 >More info seedling day 1 unirradiated WT 6h Original data
175 GR-REV 30min 0.50 >More info 0.50 >More info Col 30min Original data GEO bulk
176 LTN008-2 aza-dc 0.51 >More info 0.49 >More info LTN012-2 Mock Original data
177 phr1 phl1 Root-Pi -0.57 >More info -0.43 >More info WT Shoot+Pi roots Original data GEO bulk
178 Nicotinamide-65hr 0.52 >More info 0.48 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
179 Shoot -Cs 0.29 >More info 0.71 >More info Control-shoot Original data GEO bulk
180 A. thaliana-A. lyrata hybrid -0.45 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
181 CT101 ozone 0.52 >More info 0.47 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
182 embryo paclobutrazol 0.53 >More info 0.46 >More info embryo-control paclobutrazol embryo Original data GEO bulk
183 root hypoxia pPEP 0.45 >More info 0.54 >More info root hypoxia total hypoxia root Original data GEO bulk
184 Chitosan 3h Treatment 0.39 >More info 0.60 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
185 chito-octamer 0.39 >More info 0.60 >More info Col Mock Original data GEO bulk
186 root protophloem 40 mM NaCl 0.47 >More info 0.52 >More info root protophloem Original data GEO bulk
187 aba3-1 0.31 >More info 0.68 >More info wt Original data GEO bulk
188 IAA 0h -0.38 >More info -0.61 >More info control 0h root Original data GEO bulk
189 aox1a:rpoTmp untreated 0.43 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
190 WT Seedling BL+ABA 0.52 >More info 0.46 >More info WT Seedling BL Original data GEO bulk
191 mp-B4149 mutant IAA 0.58 >More info 0.40 >More info GR-bdl IAA Original data GEO bulk
192 P.syringae AvrRpt2 4 h (leaf) 0.45 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
193 Mutant arf2 (etiol) 0.44 >More info 0.54 >More info Col (etiol) Original data GEO bulk
194 whole roots -Fe 48 hour 0.38 >More info 0.60 >More info whole roots standard Original data GEO bulk
195 arf2 mock 0.44 >More info 0.54 >More info Col mock Original data GEO bulk
196 Col-0 INA 48h 0.40 >More info 0.58 >More info Col-0 MOCK 48h Original data GEO bulk
197 Heat shock 20%Inhibition 0.39 >More info 0.59 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
198 Botrytis cinerea 48h 0.41 >More info 0.57 >More info control 48h Original data GEO bulk
199 dde2-2 9 hpi A. brassicicola 0.48 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
200 GO5; 8h switch to ambient CO2 concentrations; 0.31 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
201 shoot-10 μM DEX- 6 hr 0.41 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
202 ice1 control 0.50 >More info 0.47 >More info WT control Original data GEO bulk
203 AvrRpm1 2 h (leaf) 0.54 >More info 0.43 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
204 root cells cortex 140mM NaCl 1 hour 0.53 >More info 0.44 >More info root cells cortex standard 1 hour root cells cortex Original data
205 Cold Stress 24 h (root) 0.45 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
206 Col whole leaf 5dpi 0.38 >More info 0.59 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
207 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
208 WT 3h -P 0.40 >More info 0.57 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
209 C24-1h IAA 0.44 >More info 0.53 >More info C24-0h IAA whole plant Original data GEO bulk
210 root longitudinal zone-4 pH 4.6 0.34 >More info 0.63 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
211 vte2-1 3d vernalization 0.43 >More info 0.54 >More info WT 3d vernalization Original data GEO bulk
212 sfr3 cold 0.36 >More info 0.61 >More info WT cold All aerial tissue Original data GEO bulk
213 npr1-1 SA -0.45 >More info -0.52 >More info Col-0 SA complete seedling Original data
214 Seedling KUA1-IOX est 0.55 >More info 0.41 >More info Seedling KUA1-IOX mock Original data
215 WT NAA/flg 1h 0.50 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
216 -Sulfate 24 h 0.20 >More info 0.76 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
217 Mutant axr3-1 (IAA) 0.29 >More info 0.67 >More info Col (IAA) Original data GEO bulk
218 35S:RPS4 eds1-2 24h -0.41 >More info -0.55 >More info 35S:RPS4 24h leaves Original data
219 light-hs 0.34 >More info 0.62 >More info light-control seedling Original data
220 SLWF infested 0.55 >More info 0.40 >More info SLWF uninfested rosette tissue Original data GEO bulk
221 Fe starvation 72 h 0.40 >More info 0.55 >More info Control Original data GEO bulk
222 whole roots -Fe 72 hour 0.40 >More info 0.55 >More info whole roots standard Original data GEO bulk
223 camta1/3 warm 0.40 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
224 K starvation (root) 0.50 >More info 0.45 >More info Ws (root) Original data GEO bulk
225 WT flg22 1h 0.44 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
226 CMV-WT 0.43 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
227 WT chitooctaose 0.45 >More info 0.50 >More info WT water Original data GEO bulk
228 8-DAC chr11-1chr17-1 0.45 >More info 0.50 >More info 8-DAC Col-0 leaf explants Original data
229 seedlings + TSA 0.54 >More info 0.40 >More info control seedlings 10-day old whole seedling Original data GEO bulk
230 Nicotinamide-85hr 0.50 >More info 0.44 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
231 SCR-GR Time 12H Dex 0.57 >More info 0.37 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
232 Root -K 0.50 >More info 0.44 >More info Control-root Original data GEO bulk
233 Nicotinamide-73hr 0.51 >More info 0.43 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
234 Osmotic Stress 24 h (shoot) 0.50 >More info 0.43 >More info Stress mock 24 h (shoot) Original data Stress treatments
235 Wounding Stress3 h (root) -0.52 >More info -0.41 >More info Stress mock 3 h (root) Original data Stress treatments
236 WT heat shock 0.30 >More info 0.63 >More info WT untreated above-ground parts Original data GEO bulk
237 Col-0 SA 0.43 >More info 0.50 >More info Col-0 Original data GEO bulk
238 toc1-1-69hr 0.38 >More info 0.54 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
239 35S::Zat12+H2O2 0.50 >More info 0.42 >More info WT+H2O2 H2O2 Original data GEO bulk
240 root cells cortex 140mM NaCl 20 hours 0.50 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
241 Red/FR Light45min 0.10 >More info 0.82 >More info FarRed Light 45min Original data Light treatments
242 npr1-3 DCA 48h 0.31 >More info 0.61 >More info npr1-3 MOCK 48h Original data GEO bulk
243 SCR-GR Time 1H Dex 0.35 >More info 0.57 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
244 root epidermis and lateral root cap pH4.6 0.42 >More info 0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
245 seedlings protease IV 0.35 >More info 0.57 >More info seedlings nontreated control whole seedling Original data
246 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.40 >More info Mock 4 h (leaf) Original data Elicitor treatments
247 smg7b-1 0.37 >More info 0.54 >More info WT whole plant Original data GEO bulk
248 col-5 DC3000 12h 0.38 >More info 0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
249 sni1 0.38 >More info 0.53 >More info WT Original data GEO bulk
250 pmr5 pmr6 0.35 >More info 0.56 >More info Col-0 Original data GEO bulk
251 Chemically 0.32 >More info 0.59 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
252 dorn1-1 Root 100 mM ATP 30 min -0.30 >More info -0.61 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
253 3x(p) 0.34 >More info 0.56 >More info 2x two week old seedlings Original data
254 root hypoxia pSUC2 0.55 >More info 0.35 >More info root hypoxia total hypoxia root Original data GEO bulk
255 root cells cortex 140mM NaCl 48 hours 0.51 >More info 0.39 >More info root cells cortex standard 1 hour root cells cortex Original data
256 wnk8-1 untreated -0.36 >More info -0.54 >More info Col-0 untreated seedlings Original data GEO bulk
257 bak1-3 +Pep2 2h 0.40 >More info 0.50 >More info WT +Pep2 2h Pep2 Original data GEO bulk
258 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
259 myb3 myb3r4d 0.23 >More info 0.66 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
260 WT-SA 0.32 >More info 0.57 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
261 miR393 flg22 1h 0.34 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
262 shoot-10 μM DEX- 12 hr 0.34 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
263 rosette Light Wounded 0.37 >More info 0.51 >More info rosette Light Control Original data GEO bulk
264 Col-0 DCA 48h 0.28 >More info 0.60 >More info Col-0 MOCK 48h Original data GEO bulk
265 abi1 hypocotyl 0.25 >More info 0.63 >More info Ler hypocotyl hypocotyl Original data GEO bulk
266 gul2-1 mutant 0.59 >More info 0.29 >More info WT 7 day-old whole seedlings Original data
267 oas-a1.1 Cd 18h 0.30 >More info 0.58 >More info Cd 18h root Root Original data GEO bulk
268 root longitudinal zone-4 NaCl 0.30 >More info 0.58 >More info root longitudinal zone-4 Original data GEO bulk
269 GA4 3 h (ga1 seed) 0.53 >More info 0.34 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
270 upb1-1 elongation zone -0.33 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
271 Whole root - low pH 6H 0.29 >More info 0.58 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
272 edr1 18 h powdery mildew 0.33 >More info 0.53 >More info Col-0 18 h powdery mildew Original data GEO bulk
273 Whole root - low pH 3H 0.33 >More info 0.53 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
274 CMV-A2b mutant 0.34 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
275 ANAC102 knock-out low oxygen -0.51 >More info -0.35 >More info Col-0 low oxygen Original data GEO bulk
276 myb50 cork -0.30 >More info -0.55 >More info wt cork cork Original data GEO bulk
277 RRE1 Chitin 0.58 >More info 0.27 >More info Chitin Original data GEO bulk
278 Mutant axr3-1 0.23 >More info 0.62 >More info Col Original data GEO bulk
279 wavy 0.27 >More info 0.58 >More info WT Original data GEO bulk
280 pmr5 0.28 >More info 0.57 >More info Col-0 Original data GEO bulk
281 35S:RPS4 eds1-2 2h -0.27 >More info -0.58 >More info 35S:RPS4 2h leaves Original data
282 noa1-2 0.55 >More info 0.29 >More info Col-0 whole seedlings Original data GEO bulk
283 HS 0.28 >More info 0.56 >More info noneHS Original data GEO bulk
284 HopZ1a treated 0.33 >More info 0.51 >More info col Original data GEO bulk
285 roottip control pWOL 0.28 >More info 0.55 >More info roottip control total control roottip Original data GEO bulk
286 sid2-1 cold -0.27 >More info -0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
287 Col-0 V. longisporum-inoculated 48 hpi 0.30 >More info 0.53 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
288 seedling h S Exp -0.21 >More info -0.62 >More info seedling -S Exp seedling Original data
289 toc1-1-61hr 0.50 >More info 0.32 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
290 Heat shock 30%Inhibition 0.32 >More info 0.50 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
291 elf3-7-23ºC -0.61 >More info -0.21 >More info WT-23ºC Original data GEO bulk
292 Blue Light 45 min -0.17 >More info -0.64 >More info White Light 45min Original data Light treatments
293 siliques AtHb1 control 0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
294 Tsu-1 -Fe 24h 0.30 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
295 root endodermis and quiescent center pH4.6 0.30 >More info 0.51 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
296 Tsu -Fe 24h Roots 0.30 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
297 cpr5 0.29 >More info 0.52 >More info WT(COL) Original data GEO bulk
298 S15-118 0.29 >More info 0.52 >More info wt Original data GEO bulk
299 ahg2-1sid2-2 0.24 >More info 0.57 >More info WT (Col) control Original data GEO bulk
300 desiccated mature pollen grains -0.23 >More info -0.58 >More info hydrated pollen grains Original data GEO bulk
301 leaf blade in D 0.27 >More info 0.53 >More info leaf blade in WL leaf blades Original data GEO bulk
302 WT+chitooctaose 0.19 >More info 0.61 >More info WT+water chitooctaose seedlings Original data GEO bulk
303 1 h Light IP RNA -0.26 >More info -0.54 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
304 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
305 Methyl Jasmonate 0.5 h 0.27 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
306 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
307 columella auxin 0.27 >More info 0.51 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
308 IAA 0.5h 0.27 >More info 0.51 >More info control 0.5h root Original data GEO bulk
309 aphid saliva treated 0.21 >More info 0.56 >More info control aphid saliva treated leaves Original data GEO bulk
310 Myzus persicae saliva 0.21 >More info 0.56 >More info Control Original data GEO bulk
311 seedling 24h after HZE atm-1 0.27 >More info 0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
312 seedling -S Exp 0.08 >More info 0.69 >More info seedling FN Exp seedling Original data
313 Total RNA 35S:HF-RPL18 0.09 >More info 0.67 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
314 Kas2 roots 2hr KNO3 nitrogen 0.25 >More info 0.51 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
315 cat2-short-day 4d 0.24 >More info 0.51 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
316 Salicylic Acid 3 h 0.23 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
317 flu dark 8hours/30 minute light 0.23 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
318 12m.KCl 0.24 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
319 4h decapitation -0.22 >More info -0.51 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
320 8h-DC3000 avrRpm1 0.22 >More info 0.51 >More info 8h-DC3000 leaves Original data GEO bulk
321 HARAP aerobic -0.22 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
322 xyl-grown cell culture- 1h 1mM Fru -0.15 >More info -0.58 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
323 miR393 0h -0.15 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
324 S14-150 0.21 >More info 0.50 >More info wt Original data GEO bulk
325 Elevated CO2 AMPLE N DAY 0.19 >More info 0.52 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
326 Col in Pi deficiency medium 0.15 >More info 0.55 >More info Col in control medium root Original data GEO bulk
327 Leaf wounded 0.14 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
328 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
329 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
330 IAA7mII over-expressor IAA Treated -0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
331 cpctry 0.08 >More info 0.55 >More info Col Original data GEO bulk
332 AsAKiin11 T2 0.09 >More info 0.52 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
333 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.04 >More info -0.55 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
334 Col-0 24hpi A. brassicicola 0.57 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
335 amiRAP aerobic -0.08 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
336 opr3 JA 0.5 h -0.02 >More info 0.61 >More info opr3 0 h Original data GEO bulk
337 xyl-grown cell culture- 1h 1mM Suc -0.02 >More info -0.57 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
338 FarRed Light 45min 0.08 >More info -0.63 >More info White Light 45min Original data Light treatments
339 WT NAA 1h 0.52 >More info 0.02 >More info WT 0h Leaf tissue Original data GEO bulk
340 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
341 HairpinZ 4 h (leaf) 0.54 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
342 CLO 4mM 0.51 >More info -0.03 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
343 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
344 4d red light grown hmr-22 seedlings 0.55 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data