4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root columella root cap pH4.6
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List of experiments correlated with "root columella root cap pH4.6"  Help Download transcriptome of top 30
Score Experiment Correlation from
root columella root cap pH4.6		 Correlation to
root columella root cap pH4.6		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root columella root cap pH4.6 1.00 >More info 1.00 >More info root columella root cap pH5.7 Original data GEO bulk
2 root cortex pH4.6 0.59 >More info 0.70 >More info root cortex pH5.7 Original data GEO bulk
3 Whole root - low pH 12H 0.64 >More info 0.63 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
4 root epidermis and lateral root cap pH4.6 0.59 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
5 root endodermis and quiescent center pH4.6 0.54 >More info 0.70 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
6 Whole root - low pH 6H 0.51 >More info 0.68 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
7 root stele pH4.6 0.51 >More info 0.67 >More info root stele pH5.7 Original data GEO bulk
8 Cocultivation 8 hrs root 0.60 >More info 0.58 >More info Mock cocultivation 8 hrs root Root Original data
9 Whole root - low pH 3H 0.44 >More info 0.69 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
10 hira-root -0.49 >More info -0.60 >More info WT-root root Original data
11 root longitudinal zone-1 pH 4.6 0.51 >More info 0.57 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
12 GO5; 8h switch to ambient CO2 concentrations; 0.48 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
13 oligomycin 1 h 0.43 >More info 0.62 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
14 Whole root - low pH 24H 0.57 >More info 0.45 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
15 Nicotinamide-65hr 0.54 >More info 0.48 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
16 Nicotinamide-61hr 0.56 >More info 0.45 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
17 WT 30μM arsenate 8 hours. 0.49 >More info 0.52 >More info WT control (not supplemented). Original data
18 35S::PI ap3-3 35S::AP-GR +DEX 0.25 >More info 0.75 >More info 0hr DEX Original data GEO bulk
19 seedlings-week-old RECA1-overexpressing
transgenic		 0.47 >More info 0.53 >More info seedlings-week-old Col-0 seedlings Original data
20 Nicotinamide-81hr 0.54 >More info 0.45 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
21 Nicotinamide-57hr 0.53 >More info 0.46 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
22 6h +Pi -0.50 >More info -0.48 >More info 6h -Pi root Original data GEO bulk
23 oligomycin 4 h 0.50 >More info 0.47 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
24 root Dosed gold 0.50 >More info 0.46 >More info root No gold .125 mM gold 24 h roots Original data
25 0.125 mM gold 24 h 0.50 >More info 0.46 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
26 Nicotinamide-89hr 0.54 >More info 0.40 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
27 root columella root cap 40 mM NaCl 0.38 >More info 0.56 >More info root columella root cap Original data GEO bulk
28 TNT-seedlings 0.59 >More info 0.35 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
29 5-Triiodobenzoic acid3 h 0.44 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
30 plant (tga2-5-6) 4h phytoprostane A1 0.41 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
31 Sulfometuron EC50 0.43 >More info 0.50 >More info Carrier Original data GEO bulk
32 Col0-PsmES4326-24hpi 0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
33 Tsu-1 -Fe 24h 0.41 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
34 Tsu -Fe 24h Roots 0.41 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
35 Shoot -Cs 0.34 >More info 0.58 >More info Control-shoot Original data GEO bulk
36 Triazolopyrimidine EC50 0.41 >More info 0.51 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
37 Col-0 under 4 days salt 0.50 >More info 0.41 >More info Col-0 under control 4 days salt treatment rosette Original data
38 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
39 Nicotinamide-85hr 0.51 >More info 0.38 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
40 root longitudinal zone-2 pH 4.6 0.37 >More info 0.52 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
41 Root -Cs 0.37 >More info 0.52 >More info Control-root Original data GEO bulk
42 nia1nia2noa1-2 0.53 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
43 IMI 4mM 0.50 >More info 0.37 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 tunicamycin -0.30 >More info -0.56 >More info DMF Original data GEO bulk
45 Imidazolinone EC50 0.29 >More info 0.56 >More info Carrier (Imidazolinone) Original data GEO bulk
46 shoots bhlh100/101 0uM Fe 0.52 >More info 0.30 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
47 coi1-2 0.30 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
48 20h Col-0 -0.30 >More info -0.50 >More info 00h Col-0 Original data GEO bulk
49 msh1 recA3 untreated 0.23 >More info 0.57 >More info WT untreated above-ground parts Original data GEO bulk
50 aphid saliva treated 0.27 >More info 0.50 >More info control aphid saliva treated leaves Original data GEO bulk
51 Myzus persicae saliva 0.27 >More info 0.50 >More info Control Original data GEO bulk
52 gpa1-4/agb1-2 ozone 2d -0.24 >More info -0.51 >More info Col ozone 2d ozone Original data GEO bulk
53 Leafminer damaged seedlings 0.16 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
54 Laer pretreat GA Flg22 1h 0.01 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
55 anac017-1 AntimycinA 3h -0.20 >More info -0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
56 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
57 afb3-1 2h KNO3 0.09 >More info 0.62 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
58 toc1-1-89hr 0.19 >More info 0.51 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
59 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
60 seed germinating in countinuous light 24h SL -0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
61 gacA 0.05 >More info -0.72 >More info PA14 seedlings Original data GEO bulk
62 siliques AtHb1 control 0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
63 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
64 pmr5 0.06 >More info 0.53 >More info Col-0 rosette Original data GEO bulk
65 bZIP1ko mutant N+Light- 0.08 >More info 0.51 >More info WT-sib N+Light- whole plant Original data GEO bulk
66 shoots WT 0uM Fe 0.51 >More info 0.07 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
67 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
69 npr1-3 MOCK 48h 0.12 >More info -0.61 >More info Col-0 MOCK 48h Original data GEO bulk
70 Mh0 UV -0.10 >More info 0.55 >More info Mh0 mock UV seedling Original data
71 Cs shoot 0.08 >More info -0.51 >More info control shoot Original data GEO bulk
72 Red/FR Light45min -0.17 >More info 0.54 >More info FarRed Light 45min Original data Light treatments