4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Cocultivation 8 hrs root
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List of experiments correlated with "Cocultivation 8 hrs root"  Help Download transcriptome of top 30
Score Experiment Correlation from
Cocultivation 8 hrs root		 Correlation to
Cocultivation 8 hrs root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Cocultivation 8 hrs root 1.00 >More info 1.00 >More info Mock cocultivation 8 hrs root Root Original data
2 hira-root -0.76 >More info -0.82 >More info WT-root root Original data
3 plant (tga2-5-6) 4h phytoprostane A1 0.76 >More info 0.82 >More info plant (tga2-5-6) 4h control Original data GEO bulk
4 Phytoprostane A1 4 h 0.74 >More info 0.78 >More info Col-0 Original data GEO bulk
5 root Dosed gold 0.77 >More info 0.72 >More info root No gold .125 mM gold 24 h roots Original data
6 0.125 mM gold 24 h 0.77 >More info 0.72 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
7 Whole root - low pH 12H 0.70 >More info 0.78 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
8 5-Triiodobenzoic acid3 h 0.70 >More info 0.78 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
9 oligomycin 4 h 0.74 >More info 0.70 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
10 CMP 4hr 0.74 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
11 AgNO3 3 h 0.67 >More info 0.77 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
12 seedlings-week-old RECA1-overexpressing
transgenic		 0.69 >More info 0.75 >More info seedlings-week-old Col-0 seedlings Original data
13 6h +Pi -0.67 >More info -0.76 >More info 6h -Pi root Original data GEO bulk
14 (Col-0)+200 uM As 0.67 >More info 0.75 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
15 WT 30μM arsenate 8 hours. 0.77 >More info 0.65 >More info WT control (not supplemented). Original data
16 oligomycin 1 h 0.60 >More info 0.81 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
17 R. solani AG8 0.72 >More info 0.69 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
18 Col-0 low oxygen 0.72 >More info 0.68 >More info Col-0 control low oxygen root Original data GEO bulk
19 (Col-0)+100 uM As 0.64 >More info 0.76 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
20 Fenclorim 4hr 0.71 >More info 0.69 >More info Acetone 4hr root Original data GEO bulk
21 8hr-pH4.5 0.65 >More info 0.74 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
22 9 hr Hypoxia 1 hr recovery Total RNA 0.71 >More info 0.68 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
23 bak1-3 +Pep2 10h 0.69 >More info 0.70 >More info WT +Pep2 10h Pep2 Original data GEO bulk
24 TNT-seedlings 0.63 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
25 plant (Col-0) 4h phytoprostane A1 0.67 >More info 0.70 >More info plant (tga2-5-6) 4h control Original data GEO bulk
26 SA 0.67 >More info 0.69 >More info WT mock Whole seedling Original data GEO bulk
27 (Ws-2)+100 uM As 0.65 >More info 0.71 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
28 WT+H2O2 0.63 >More info 0.71 >More info WT H2O2 Original data GEO bulk
29 P.p 6hai 0.68 >More info 0.65 >More info At-Control roots Original data GEO bulk
30 P.p 30hai 0.70 >More info 0.63 >More info At-Control roots Original data GEO bulk
31 dicamba 0.68 >More info 0.64 >More info WT mock whole seedling Original data GEO bulk
32 Fenclorim 24hr 0.66 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
33 Whole root - low pH 3H 0.56 >More info 0.75 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
34 9 hr Hypoxia Total RNA 0.68 >More info 0.62 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
35 WT AntimycinA 3h 0.64 >More info 0.66 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
36 CMP 24hr 0.69 >More info 0.61 >More info Acetone 24hr root Original data GEO bulk
37 DFPM 0.65 >More info 0.64 >More info control Original data GEO bulk
38 Whole root - low pH 24H 0.60 >More info 0.68 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
39 9m.KCl 0.57 >More info 0.70 >More info To. KCl 14 day old Roots Original data GEO bulk
40 Anoxia 0.58 >More info 0.69 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
41 coi1-2 0.61 >More info 0.65 >More info Col-0 mock Whole seedling Original data GEO bulk
42 Heat and anoxia 0.59 >More info 0.67 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
43 inhibitor A Treated 0.56 >More info 0.70 >More info Negative Control Original data GEO bulk
44 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
45 9 hr Hypoxia 1 hr recovery IP RNA 0.65 >More info 0.60 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
46 Roots Cd -0.60 >More info -0.64 >More info Roots control Cd Root Original data GEO bulk
47 WT H2O2 3h 0.59 >More info 0.65 >More info WT water 3h 3h_H2O2 Original data GEO bulk
48 anac017-2 AntimycinA 3h -0.66 >More info -0.58 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
49 Nicotinamide-57hr 0.64 >More info 0.59 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
50 Seedling-HeatStressed TOTALmRNA 0.54 >More info 0.68 >More info Seedling-control TOTALmRNA seedling Original data
51 Whole root - low pH 6H 0.53 >More info 0.68 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
52 P.p 2.5hai 0.59 >More info 0.62 >More info At-Control roots Original data GEO bulk
53 Seedling-HeatStressed POLYSOMESmRNA 0.52 >More info 0.69 >More info Seedling-control POLYSOMESmRNA seedling Original data
54 ABA DFPM 0.68 >More info 0.53 >More info control Original data GEO bulk
55 inhibitor B Treated 0.52 >More info 0.69 >More info Negative Control Original data GEO bulk
56 bbx24 in Simulated Shade -0.67 >More info -0.53 >More info WT in simulated shade shade seedling Original data
57 root cells endodermis 140mM NaCl 3 hours 0.56 >More info 0.64 >More info root cells endodermis standard 1 hour root cells endodermis Original data
58 P.p 10.5hai 0.64 >More info 0.56 >More info At-Control roots Original data GEO bulk
59 Shoot -Cs 0.40 >More info 0.80 >More info Control-shoot Original data GEO bulk
60 flu 0.60 >More info 0.60 >More info WT Col Original data GEO bulk
61 1h +Pi -0.51 >More info -0.69 >More info 1h -Pi root Original data GEO bulk
62 35S::PI ap3-3 35S::AP-GR +DEX 0.47 >More info 0.73 >More info 0hr DEX Original data GEO bulk
63 Nicotinamide-81hr 0.61 >More info 0.58 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
64 Nicotinamide-53hr 0.58 >More info 0.61 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
65 root stele 40 mM NaCls 0.57 >More info 0.62 >More info root stele Original data GEO bulk
66 IMI 4mM 0.59 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
67 9 hr Hypoxia IP RNA 0.62 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
68 IAA/inhibitor B Treated 0.50 >More info 0.68 >More info IAA Treated Original data GEO bulk
69 root columella root cap pH4.6 0.58 >More info 0.60 >More info root columella root cap pH5.7 Original data GEO bulk
70 gai Control 0.60 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
71 NJ15 0.56 >More info 0.61 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
72 Sulfometuron EC50 0.55 >More info 0.62 >More info Carrier Original data GEO bulk
73 WT 3h -P 0.48 >More info 0.69 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
74 Seedling KUA1-IOX est 0.60 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
75 Col-0 9 hpi A. brassicicola 0.50 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
76 gun1gun5 far-red pretreated -0.53 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
77 flu over-tAPX 0.53 >More info 0.63 >More info WT Col Original data GEO bulk
78 GO5; 8h switch to ambient CO2 concentrations; 0.44 >More info 0.72 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
79 root columella root cap 40 mM NaCl 0.60 >More info 0.55 >More info root columella root cap Original data GEO bulk
80 root stele pH4.6 0.54 >More info 0.61 >More info root stele pH5.7 Original data GEO bulk
81 safener treated 0.56 >More info 0.59 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
82 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
83 Salt Stress 24 h (root) 0.59 >More info 0.56 >More info Stress mock 24 h (root) Original data Stress treatments
84 Col ozone 3h 0.45 >More info 0.70 >More info Col clean-air 3h ozone Original data GEO bulk
85 dark-hs 0.49 >More info 0.66 >More info dark-control seedling Original data
86 Col-0 under 4 days salt 0.59 >More info 0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
87 Cycloheximide 3 h 0.58 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
88 IPT8 mutant tZ 12h 0.61 >More info 0.53 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
89 toc1-1-53hr 0.56 >More info 0.58 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
90 15m.KCl 0.52 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
91 pepr1-1 Pepr2-3 +Pep2 10h -0.56 >More info -0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
92 cell culture 4 h phytoprostane A1 0.50 >More info 0.63 >More info cell culture 4 h control Original data GEO bulk
93 Osmotic Stress 24 h (root) 0.66 >More info 0.47 >More info Stress mock 24 h (root) Original data Stress treatments
94 Nicotinamide-61hr 0.58 >More info 0.54 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
95 Col-0 37C 0.59 >More info 0.53 >More info Col-0 22C Original data GEO bulk
96 root longitudinal zone-1 pH 4.6 0.52 >More info 0.60 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
97 nia1nia2 0.58 >More info 0.54 >More info Col-0 whole seedlings Original data GEO bulk
98 Col-Luc WT 3h antimycin A 0.54 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
99 Col-0 2h NAA 0.63 >More info 0.48 >More info Col-0 6h MOCK Original data GEO bulk
100 R. solani AG2-1 0.60 >More info 0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
101 root endodermis and quiescent center pH4.6 0.52 >More info 0.59 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
102 24h +Pi -0.61 >More info -0.49 >More info 24h -Pi root Original data GEO bulk
103 Triazolopyrimidine EC50 0.49 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
104 WT seedlings MV 0.64 >More info 0.45 >More info WT seedlings control Seedlings Original data GEO bulk
105 toc1-1-65hr 0.53 >More info 0.56 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
106 Laer treat paclobutrazol (PAC) 0.55 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
107 IAA/inhibitor A Treated 0.52 >More info 0.57 >More info IAA Treated Original data GEO bulk
108 oas-a1.1 Cd 18h 0.50 >More info 0.59 >More info Cd 18h root Root Original data GEO bulk
109 Col-0 C2H4 24h 0.50 >More info 0.58 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
110 SA 4mM 0.49 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
111 dde2-2 9 hpi A. brassicicola 0.48 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
112 Chemically 0.48 >More info 0.60 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
113 cat2-2; 8h switch to ambient CO2 concentrations; 0.46 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
114 rcf1-1 cold 24h 0.51 >More info 0.56 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
115 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.46 >More info WT light Original data GEO bulk
116 toc1-1-81hr 0.51 >More info 0.56 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
117 6-trichlorophenoxyacetic acid 3 h 0.39 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
118 -Sulfate 24 h 0.39 >More info 0.68 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
119 whole roots 140 mM NaCl 1 hour 0.60 >More info 0.47 >More info whole roots standard Original data GEO bulk
120 nia1nia2noa1-2 0.59 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
121 Primisulfuron EC50 0.49 >More info 0.58 >More info Carrier (primisulfuron) Original data GEO bulk
122 chito-tetramer 0.53 >More info 0.53 >More info Col Mock Original data GEO bulk
123 WT 2-4h Xanthomonas 0.55 >More info 0.51 >More info WT T0 Original data GEO bulk
124 Col-0 flu HL 3h 0.56 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
125 4d red light grown hmr-5 seedlings 0.55 >More info 0.51 >More info 4d red light grown WT(Col-0) seedlings Original data
126 root endodermis and quiescent center 40 mM NaCl 0.56 >More info 0.50 >More info root endodermis and quiescent center Original data GEO bulk
127 35S:RPS4 eds1-2 8h -0.51 >More info -0.55 >More info 35S:RPS4 8h leaves Original data
128 npr1-3 DCA 48h 0.42 >More info 0.64 >More info npr1-3 MOCK 48h Original data GEO bulk
129 Ws HS 0.47 >More info 0.59 >More info Ws control heat shocked seedling Original data GEO bulk
130 sicy-192 gun1-101 cotyledons 0.46 >More info 0.60 >More info WT cotyledons cotyledons Original data
131 Cor 10h 0.45 >More info 0.60 >More info Mock 10h Cor Original data GEO bulk
132 whole roots -Fe 48 hour 0.47 >More info 0.58 >More info whole roots standard Original data GEO bulk
133 Col-0 HS 0.47 >More info 0.58 >More info Col-0 control heat shocked seedling Original data GEO bulk
134 WT (Col-0) heat shock 0.47 >More info 0.58 >More info WT (Col-0) whole seedling Original data GEO bulk
135 root cells stele 140mM NaCl 3 hours 0.48 >More info 0.57 >More info root cells stele standard 1 hour root cells stele Original data
136 Nicotinamide-65hr 0.54 >More info 0.50 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
137 ataf1-1 mutant Col-0 Bgh inoculated 0.48 >More info 0.56 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
138 Tsu-1 -Fe 24h 0.44 >More info 0.60 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
139 Tsu -Fe 24h Roots 0.44 >More info 0.60 >More info Tsu +Fe 24h Roots Original data GEO bulk
140 sid2-2 9 hpi A. brassicicola 0.47 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
141 seedling -S Exp 0.44 >More info 0.60 >More info seedling FN Exp seedling Original data
142 Wounding Stress3 h (root) -0.51 >More info -0.52 >More info Stress mock 3 h (root) Original data Stress treatments
143 Nicotinamide-85hr 0.53 >More info 0.50 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
144 Nicotinamide-49hr 0.56 >More info 0.47 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
145 Mutant siz1-3 (Drought) 0.50 >More info 0.53 >More info Col-0 (Drought) Original data GEO bulk
146 BLM+INA 0.51 >More info 0.52 >More info CK BLM and INA seedling Original data
147 siz1-3 drought 0.50 >More info 0.53 >More info Col-0 drought Original data GEO bulk
148 chito-octamer 0.49 >More info 0.54 >More info Col Mock Original data GEO bulk
149 ein2-1 9 hpi A. brassicicola 0.43 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
150 npr1-1 SA -0.53 >More info -0.49 >More info Col-0 SA complete seedling Original data
151 whole roots 140 mM NaCl 30 minutes 0.56 >More info 0.46 >More info whole roots standard Original data GEO bulk
152 toc1-1-77hr 0.52 >More info 0.50 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
153 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.55 >More info 0.47 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
154 root epidermis and lateral root cap pH4.6 0.55 >More info 0.47 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
155 arf2 brz -0.55 >More info -0.47 >More info arf2 mock Original data GEO bulk
156 Nicotinamide-73hr 0.52 >More info 0.50 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
157 SCR-GR Time 1H Dex 0.27 >More info 0.75 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
158 toc1-1-85hr 0.45 >More info 0.57 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
159 tor mutant glucose 0.45 >More info 0.57 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
160 ani1 T16 -0.47 >More info -0.55 >More info WT T16 root tissue Original data GEO bulk
161 root cells cortex 140mM NaCl 8 hours 0.49 >More info 0.53 >More info root cells cortex standard 1 hour root cells cortex Original data
162 Osmotic Stress 24 h (shoot) 0.55 >More info 0.46 >More info Stress mock 24 h (shoot) Original data Stress treatments
163 embryo paclobutrazol 0.54 >More info 0.47 >More info embryo-control paclobutrazol embryo Original data GEO bulk
164 2 hr Hypoxia Total RNA 0.56 >More info 0.45 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
165 root hypoxia total 0.55 >More info 0.46 >More info root control total Original data GEO bulk
166 toc1-1-57hr 0.59 >More info 0.42 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
167 C24-1h IAA 0.47 >More info 0.54 >More info C24-0h IAA whole plant Original data GEO bulk
168 low CO2 + light 0.44 >More info 0.57 >More info normal CO2 + light Original data GEO bulk
169 col-5 DC3000 12h 0.48 >More info 0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
170 IPT8 induced 12h 0.57 >More info 0.43 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
171 root cortex pH4.6 0.53 >More info 0.47 >More info root cortex pH5.7 Original data GEO bulk
172 WT Col-0 Bgh inoculated 0.46 >More info 0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
173 Heat 0.43 >More info 0.57 >More info Control 90 minutes at 38°C. Original data GEO bulk
174 Botrytis cinerea 48h 0.46 >More info 0.54 >More info control 48h Original data GEO bulk
175 root cells endodermis 140mM NaCl 8 hours 0.44 >More info 0.56 >More info root cells endodermis standard 1 hour root cells endodermis Original data
176 35S:RPS4 eds1-2 24h -0.47 >More info -0.53 >More info 35S:RPS4 24h leaves Original data
177 aox1a:rpoTmp untreated 0.48 >More info 0.52 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
178 LTN008-2 aza-dc 0.57 >More info 0.42 >More info LTN012-2 Mock Original data
179 gul2-1 mutant 0.59 >More info 0.40 >More info WT 7 day-old whole seedlings Original data
180 Fe starvation 72 h 0.45 >More info 0.54 >More info Control Original data GEO bulk
181 whole roots -Fe 72 hour 0.45 >More info 0.54 >More info whole roots standard Original data GEO bulk
182 mkk1/mkk2 24h BTH rep 0.49 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
183 shoots bhlh100/101 0uM Fe 0.58 >More info 0.40 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
184 Col upon hypoxia 6 hrs 0.50 >More info 0.48 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
185 plant (tga2-5-6) 4h OPDA 0.58 >More info 0.40 >More info plant (tga2-5-6) 4h control Original data GEO bulk
186 WT NAA/flg 1h 0.53 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
187 Nicotinamide-89hr 0.51 >More info 0.47 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
188 8-DAC chr11-1chr17-1 0.53 >More info 0.45 >More info 8-DAC Col-0 leaf explants Original data
189 efr-1 +elf18 10h -0.50 >More info -0.48 >More info WT +elf18 10h elf18 Original data GEO bulk
190 Cold Stress 24 h (root) 0.55 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
191 embryo ABA 0.53 >More info 0.45 >More info embryo-control ABA embryo Original data GEO bulk
192 root protophloem 40 mM NaCl 0.43 >More info 0.55 >More info root protophloem Original data GEO bulk
193 Col-0 V. longisporum-inoculated 48 hpi 0.36 >More info 0.62 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
194 AvrRpm1 2 h (leaf) 0.54 >More info 0.43 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
195 Te ozone 0.51 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
196 Laer Flg22 1h 0.45 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
197 UV 0.44 >More info 0.53 >More info WT aerial region Original data GEO bulk
198 Elevated CO2 AMPLE N NIGHT 0.43 >More info 0.54 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
199 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
200 seedling 3h after Gamma WT 0.42 >More info 0.54 >More info seedling day 1 unirradiated WT 3h Original data
201 seedlings +5AC 0.55 >More info 0.40 >More info control seedlings 10-day old whole seedling Original data GEO bulk
202 CT101 ozone 0.50 >More info 0.45 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
203 +1.6 mM Tween 20 1 h. 0.51 >More info 0.44 >More info +distilled water 1 h. Original data GEO bulk
204 WT chitooctaose 0.52 >More info 0.43 >More info WT water Original data GEO bulk
205 Col-0-avrB-6h 0.43 >More info 0.52 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
206 Whole root - low pH 1H 0.26 >More info 0.69 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
207 Root -Cs 0.44 >More info 0.51 >More info Control-root Original data GEO bulk
208 seedlings protease IV 0.41 >More info 0.54 >More info seedlings nontreated control whole seedling Original data
209 Col BTH 0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
210 seedling 1.5h after Gamma WT 0.53 >More info 0.41 >More info seedling day 1 unirradiated WT 1.5h Original data
211 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
212 cat2-short-day 2d 0.37 >More info 0.56 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
213 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.50 >More info 0.43 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
214 col-5 hrpA 12h 0.42 >More info 0.51 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
215 root longitudinal zone-4 NaCl 0.41 >More info 0.52 >More info root longitudinal zone-4 Original data GEO bulk
216 rpoTmp(line) MLD stressed 0.42 >More info 0.51 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
217 Col-0 ozone 0.50 >More info 0.42 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
218 plant (Col-0) 4h OPDA 0.55 >More info 0.36 >More info plant (Col-0) 4h control Original data GEO bulk
219 OPDA 4 h 0.55 >More info 0.36 >More info Col-0 Original data GEO bulk
220 myb3 myb3r4d 0.27 >More info 0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
221 anac017-2 water 3h 0.32 >More info 0.59 >More info WT water 3h 3h_water Original data GEO bulk
222 Whole root - S 3H 0.34 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
223 Leafminer damaged seedlings 0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
224 toc1-1-49hr 0.55 >More info 0.35 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
225 WT in -N 0.35 >More info 0.55 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
226 pericycle auxin 0.39 >More info 0.51 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
227 AFB1 0h 0.50 >More info 0.39 >More info Col 0h Leaf Original data GEO bulk
228 til1-1 22C 0.38 >More info 0.51 >More info Col-0 22C Original data GEO bulk
229 Col whole leaf 5dpi 0.39 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
230 root longitudinal zone-4 pH 4.6 0.28 >More info 0.61 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
231 aba3-1 0.37 >More info 0.52 >More info wt Original data GEO bulk
232 columella auxin 0.37 >More info 0.52 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
233 root longitudinal zone-4 low sulfur -0.33 >More info -0.55 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
234 RRE2 Chitin 0.53 >More info 0.35 >More info Chitin Original data GEO bulk
235 Col-0 2HS 0.50 >More info 0.38 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
236 ahg1-1 0.36 >More info 0.52 >More info ABA control Original data GEO bulk
237 CeO2 germinant -0.26 >More info -0.62 >More info Millipore Water germinant CeO2 seedling Original data
238 SCR-GR Time 12H Dex 0.55 >More info 0.32 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
239 csn3-1 light 0.52 >More info 0.35 >More info WT light Original data GEO bulk
240 IAA 3 h 0.36 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
241 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
242 phr1 Shoot-Pi 0.55 >More info 0.31 >More info WT Root-Pi shoots Original data GEO bulk
243 Salicylic Acid 3 h 0.32 >More info 0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
244 Mutant axr3-1 (IAA) 0.32 >More info 0.54 >More info Col (IAA) Original data GEO bulk
245 Col-0 SA 0.34 >More info 0.52 >More info Col-0 Original data GEO bulk
246 iron minus 0 h 0.51 >More info 0.35 >More info iron +0 h root Original data GEO bulk
247 gpa1 -ABA GC -0.34 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
248 gabaculin 0.28 >More info 0.57 >More info WT Col-0 seedling Original data GEO bulk
249 WT (Col) glucose -0.35 >More info -0.50 >More info WT (Col) glucose seedlings Original data GEO bulk
250 dorn1-1 Root 100 mM ATP 30 min -0.28 >More info -0.57 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
251 glk1 glk2 GLK1-GR +DEX 24h -0.51 >More info -0.33 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
252 1hr-pH4.5 0.33 >More info 0.51 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
253 Col0 roots 2hr KNO3 nitrogen -0.29 >More info -0.55 >More info Col0 roots 2hr KCl control root Original data GEO bulk
254 RGA-GR-DEX 0.25 >More info 0.59 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
255 root - 01% oxygen - 48h 0.26 >More info 0.58 >More info root - 21% oxygen - 48h Original data GEO bulk
256 ahg2-1sid2-2 0.23 >More info 0.61 >More info WT (Col) control Original data GEO bulk
257 CLO 4mM 0.53 >More info 0.28 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
258 Mutant axr3-1 0.30 >More info 0.51 >More info Col Original data GEO bulk
259 rosette leaves fdh 0.31 >More info 0.50 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
260 35S:RPS4 eds1-2 2h -0.29 >More info -0.52 >More info 35S:RPS4 2h leaves Original data
261 Ibuprofen 3 h 0.27 >More info 0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
262 E.orontii Infection 6 h 0.26 >More info 0.53 >More info Uninfection 6 h Original data Elicitor treatments
263 miR393 0h -0.18 >More info -0.61 >More info WT 0h Leaf tissue Original data GEO bulk
264 P35S:rGRF1 -0.29 >More info -0.50 >More info Col-0 Original data GEO bulk
265 WT+chitooctaose 0.25 >More info 0.53 >More info WT+water chitooctaose seedlings Original data GEO bulk
266 detached inflorescences 24h 0.26 >More info 0.52 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
267 3m.KCl 0.51 >More info 0.26 >More info To. KCl 14 day old Roots Original data GEO bulk
268 root longitudinal zone-2 pH 4.6 0.26 >More info 0.51 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
269 ice1 control 0.50 >More info 0.26 >More info WT control Original data GEO bulk
270 ARR21C-ox 0.53 >More info 0.23 >More info Col-0 Original data ARR21C overexpression
271 SLWF infested 0.50 >More info 0.26 >More info SLWF uninfested rosette tissue Original data GEO bulk
272 Col-0 0h NAA 0.51 >More info 0.24 >More info Col-0 6h MOCK Original data GEO bulk
273 AsAKiin11 T2 0.19 >More info 0.56 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
274 Red/FR Light45min -0.06 >More info 0.79 >More info FarRed Light 45min Original data Light treatments
275 whole roots -Fe 6 hour 0.16 >More info 0.56 >More info whole roots standard Original data GEO bulk
276 gpa1-4/agb1-2 ozone 2d -0.13 >More info -0.59 >More info Col ozone 2d ozone Original data GEO bulk
277 WT-16ºC -0.51 >More info -0.20 >More info WT-23ºC Original data GEO bulk
278 12h volatiles Sm. R3089 -0.18 >More info -0.53 >More info 12h untreated whole seedling Original data GEO bulk
279 root longitudinal zone-3 pH 4.6 0.17 >More info 0.52 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
280 ACC 3 h 0.19 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
281 ABA SA 24h 0.11 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
282 SA Treated 0.60 >More info 0.08 >More info Water Original data GEO bulk
283 phyABCDE Rc50 -0.14 >More info -0.53 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
284 cpctry 0.15 >More info 0.52 >More info Col Original data GEO bulk
285 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
286 rgs1+no sugars -0.14 >More info -0.52 >More info WT+no sugars rosette leaves Original data GEO bulk
287 bri1-116 -0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
288 amiRAP aerobic -0.09 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
289 FarRed Light 45min 0.10 >More info -0.69 >More info White Light 45min Original data Light treatments
290 E.orontii Infection 3 day 0.08 >More info 0.51 >More info Uninfection 3 day Original data Elicitor treatments
291 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
292 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
293 Col-0 24hpi A. brassicicola 0.55 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
294 WT roots - Fe 0.52 >More info 0.05 >More info WT roots + Fe Roots Original data GEO bulk
295 Ler KAR1 24h seed 0.06 >More info 0.50 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
296 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
297 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk