4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT+chitooctaose
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List of experiments correlated with "WT+chitooctaose"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT+chitooctaose		 Correlation to
WT+chitooctaose		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT+chitooctaose 1.00 >More info 1.00 >More info WT+water chitooctaose seedlings Original data GEO bulk
2 chito-octamer 0.90 >More info 0.91 >More info Col Mock Original data GEO bulk
3 chito-tetramer 0.91 >More info 0.88 >More info Col Mock Original data GEO bulk
4 WT chitooctaose 0.89 >More info 0.86 >More info WT water Original data GEO bulk
5 AtLysM RLK1 mutant chitooctaose -0.89 >More info -0.84 >More info WT chitooctaose Original data GEO bulk
6 Chitin 0.86 >More info 0.77 >More info Col C Original data GEO bulk
7 seedlings protease IV 0.82 >More info 0.81 >More info seedlings nontreated control whole seedling Original data
8 Cycloheximide 3 h 0.85 >More info 0.73 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
9 WT flg22 1h 0.79 >More info 0.79 >More info WT 0h Leaf tissue Original data GEO bulk
10 miR393 flg22 1h 0.78 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
11 WT NAA/flg 1h 0.78 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
12 AFB1 flg22 1h 0.79 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
13 Col ozone 3h 0.75 >More info 0.79 >More info Col clean-air 3h ozone Original data GEO bulk
14 WT flg22 2h 0.78 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
15 35S:RPS4 eds1-2 2h -0.74 >More info -0.78 >More info 35S:RPS4 2h leaves Original data
16 Laer Flg22+GA 1h 0.78 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
17 anac017-2 AntimycinA 3h -0.81 >More info -0.70 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
18 Laer Flg22 1h 0.77 >More info 0.73 >More info Laer Control leaf discs Original data GEO bulk
19 Col-Luc WT 3h antimycin A 0.82 >More info 0.68 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
20 WT AntimycinA 3h 0.79 >More info 0.70 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
21 pepr1-1 Pepr2-3 +Pep2 2h -0.79 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
22 ex2 flu dark 8hours/30 minute light 0.70 >More info 0.77 >More info col dark 8hours/30 minute light Original data GEO bulk
23 rosette Light Wounded 0.74 >More info 0.72 >More info rosette Light Control Original data GEO bulk
24 flu dark 8hours/30 minute light 0.64 >More info 0.79 >More info col dark 8hours/30 minute light Original data GEO bulk
25 hrpA fliC 7h 0.71 >More info 0.72 >More info Mock 7h hrpA fliC Original data GEO bulk
26 oligomycin 4 h 0.80 >More info 0.62 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
27 rosette Dark Wounded 0.72 >More info 0.70 >More info rosette Dark Control Original data GEO bulk
28 ein2-1 9 hpi A. brassicicola 0.82 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
29 GST NPP1 4 h (leaf) 0.75 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
30 WT-Dry 0.70 >More info 0.72 >More info WT-CK dehydration treatment 1h Original data
31 P.p 2.5hai 0.77 >More info 0.64 >More info At-Control roots Original data GEO bulk
32 Cor hrpS 10h 0.70 >More info 0.71 >More info Mock 10h Cor hrpS Original data GEO bulk
33 AFB1 flg22 2h 0.76 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
34 WT 2-4h Xanthomonas 0.74 >More info 0.65 >More info WT T0 Original data GEO bulk
35 Phaseolicola 2 h (leaf) 0.67 >More info 0.71 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
36 miR393 flg22 2h 0.72 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
37 GA 0.68 >More info 0.68 >More info none GA Rosette Original data GEO bulk
38 P.p 6hai 0.75 >More info 0.61 >More info At-Control roots Original data GEO bulk
39 WT NAA/flg 2h 0.72 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
40 P.p 10.5hai 0.74 >More info 0.62 >More info At-Control roots Original data GEO bulk
41 WT 3h -P 0.63 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
42 TNT-seedlings 0.72 >More info 0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
43 seedlings-week-old RECA1-overexpressing
transgenic		 0.74 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
44 35S::ERF104 Flg22 4h 0.72 >More info 0.64 >More info 35S::ERF104 H2O 4h Original data GEO bulk
45 Dex-rga(delta17) 4h GA4+DEX -0.74 >More info -0.61 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
46 col-5 hrpA 12h 0.70 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
47 ataf1-1 mutant Col-0 Bgh inoculated 0.78 >More info 0.57 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
48 Col-0 V. longisporum-inoculated 48 hpi 0.73 >More info 0.61 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
49 npr1 sni1 brca2a SA -0.74 >More info -0.59 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
50 HARAP aerobic -0.60 >More info -0.72 >More info WT aerobic aerobic Original data GEO bulk
51 hrcC 0.70 >More info 0.62 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
52 bHLH122 ox -0.61 >More info -0.71 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
53 AgNO3 3 h 0.75 >More info 0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
54 WT NAA 1h 0.65 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
55 35S::MBF1c 0.67 >More info 0.64 >More info control Original data GEO bulk
56 Selenate (root) 0.72 >More info 0.59 >More info Ws (root) Original data GEO bulk
57 Root Selenate 0.72 >More info 0.59 >More info Root control 40 micromolar selenate Root Original data GEO bulk
58 HARAP hypoxic 0.69 >More info 0.62 >More info hypoxic hypoxia Original data GEO bulk
59 P.p 30hai 0.71 >More info 0.60 >More info At-Control roots Original data GEO bulk
60 sid2-2 9 hpi A. brassicicola 0.79 >More info 0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 GST 4 h (leaf) 0.64 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
62 flu over-tAPX 0.73 >More info 0.58 >More info WT Col Original data GEO bulk
63 Col-0 9 hpi A. brassicicola 0.78 >More info 0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
64 atr mock 0.81 >More info 0.49 >More info WT mock shoot apical meristem Original data
65 protoplasts T1 [flg22] 0.68 >More info 0.61 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
66 bak1-3 +Pep2 2h 0.56 >More info 0.73 >More info WT +Pep2 2h Pep2 Original data GEO bulk
67 col-5 DC3000-avrRpm 4h 0.61 >More info 0.68 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
68 FLIGHT TAGESB plate6 ROOTS 0.62 >More info 0.67 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
69 DFPM 0.71 >More info 0.58 >More info control Original data GEO bulk
70 WT+H2O2 0.73 >More info 0.55 >More info WT H2O2 Original data GEO bulk
71 Laer Flg22+GA 2h 0.72 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
72 Dex-rga(delta17) 2h GA4+DEX -0.73 >More info -0.55 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
73 CMP 4hr 0.73 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
74 WT-NOCO2 INFECTED 0.75 >More info 0.53 >More info WT-MOCK Original data GEO bulk
75 Col-0 ozone 0.78 >More info 0.50 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
76 Flagellin 4 h (leaf) 0.65 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
77 1h +Pi -0.60 >More info -0.68 >More info 1h -Pi root Original data GEO bulk
78 Col0-PsmES4326-24hpi 0.67 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
79 efr-1 +elf18 10h -0.71 >More info -0.57 >More info WT +elf18 10h elf18 Original data GEO bulk
80 flu 0.74 >More info 0.53 >More info WT Col Original data GEO bulk
81 coi1-2 0.66 >More info 0.61 >More info Col-0 mock Whole seedling Original data GEO bulk
82 ani1 T0.5 -0.63 >More info -0.63 >More info WT T0.5 root tissue Original data GEO bulk
83 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.78 >More info 0.48 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
84 E.coli TUV86 2 fliC 7h 0.66 >More info 0.60 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
85 dde2-2 9 hpi A. brassicicola 0.81 >More info 0.45 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
86 inhibitor A Treated 0.75 >More info 0.51 >More info Negative Control Original data GEO bulk
87 Te ozone 0.78 >More info 0.48 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
88 WT no Pi 0.77 >More info 0.49 >More info WT complete seedlings Original data
89 coi1-16 ein2 sid2 ozone 0.81 >More info 0.45 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
90 WT +elf18 2h 0.66 >More info 0.59 >More info WT untreated elf18 Original data GEO bulk
91 irradiated leaf (cmt 5d) 0.70 >More info 0.55 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
92 msh1 albino 0.75 >More info 0.50 >More info WT aerial part Original data GEO bulk
93 bak1-3 +Pep2 10h 0.68 >More info 0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
94 SCR-GR Time 1H Dex 0.58 >More info 0.67 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
95 C24 ozone 0.80 >More info 0.45 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
96 Leaf wounded 0.59 >More info 0.66 >More info Leaf control vegetative leaf Original data GEO bulk
97 AvrRpm1 2 h (leaf) 0.60 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
98 tunicamycin -0.62 >More info -0.62 >More info DMF Original data GEO bulk
99 aba1 hypocotyl 0.59 >More info 0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
100 abi1 hypocotyl 0.58 >More info 0.66 >More info Ler hypocotyl hypocotyl Original data GEO bulk
101 root Dosed gold 0.75 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
102 hrpA 7h 0.64 >More info 0.60 >More info Mock 7h hrpA Original data GEO bulk
103 0.125 mM gold 24 h 0.75 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
104 35S:RPS4 eds1-2 8h -0.72 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
105 4C 2h(SOIL) 0.54 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
106 OsSAP11 expressing -0.62 >More info -0.61 >More info WT seedlings Original data GEO bulk
107 Laer Flg22 2h 0.70 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
108 CeO2 germinant -0.62 >More info -0.61 >More info Millipore Water germinant CeO2 seedling Original data
109 1 h Light IP RNA -0.62 >More info -0.60 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
110 IAA/inhibitor A Treated 0.75 >More info 0.47 >More info IAA Treated Original data GEO bulk
111 Leaf systemic 0.60 >More info 0.62 >More info Leaf control vegetative leaf Original data GEO bulk
112 coi1-16 ein2 sid2 ctrl -0.79 >More info -0.43 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
113 oligomycin 1 h 0.65 >More info 0.57 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
114 WT Col-0 Bgh inoculated 0.71 >More info 0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
115 anac017-1 H2O2 3h -0.72 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
116 Col whole leaf 7dpi 0.70 >More info 0.51 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
117 shoots bhlh100/101 100uM Fe 0.63 >More info 0.58 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
118 Salt Stress 24 h (root) 0.72 >More info 0.49 >More info Stress mock 24 h (root) Original data Stress treatments
119 Leafminer damaged seedlings 0.64 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
120 npr1 sni1 SA 0.64 >More info 0.56 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
121 AvrRpt2 Col-0 6hpi 0.73 >More info 0.47 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
122 E.coli 0157 H7 7h 0.62 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
123 CT101 ozone 0.75 >More info 0.44 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
124 Roots Cd -0.68 >More info -0.51 >More info Roots control Cd Root Original data GEO bulk
125 Col-0-1h IAA 0.71 >More info 0.48 >More info Col-0-0h IAA whole plant Original data GEO bulk
126 sid2-avrB-6h 0.50 >More info 0.69 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
127 mpk6-ko Flg22 4h 0.55 >More info 0.64 >More info mpk6-ko H2O 4h Original data GEO bulk
128 Col-0 DCA 48h 0.64 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
129 atr zebularine 0.74 >More info 0.45 >More info WT zebularine shoot apical meristem Original data
130 CMV-WT 0.67 >More info 0.51 >More info Mock-At Aerial tissues Original data GEO bulk
131 Infected pft1 leaf 0.63 >More info 0.55 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
132 bZIP1ko mutant N+Light- 0.54 >More info 0.64 >More info WT-sib N+Light- whole plant Original data GEO bulk
133 GO5; 8h switch to ambient CO2 concentrations; 0.65 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
134 WT seedlings MV 0.74 >More info 0.44 >More info WT seedlings control Seedlings Original data GEO bulk
135 Light 0.69 >More info 0.49 >More info Control Original data GEO bulk
136 A. thaliana-A. lyrata hybrid -0.58 >More info -0.59 >More info A. thaliana mature leaves before flowering Original data GEO bulk
137 CMV-A2b mutant 0.66 >More info 0.51 >More info Mock-At Aerial tissues Original data GEO bulk
138 Inflorescences Trp1 -0.42 >More info -0.75 >More info Inflorescences ler inflorescences Original data GEO bulk
139 pmr5 pmr6 0.68 >More info 0.48 >More info Col-0 Original data GEO bulk
140 1 h Light Total RNA -0.54 >More info -0.62 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
141 aba2 1% sucrose 12-day-old 0.56 >More info 0.60 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
142 max4 hypocotyl 0.57 >More info 0.59 >More info wt hypocotyl hypocotyl Original data GEO bulk
143 Col-0-30min IAA 0.70 >More info 0.46 >More info Col-0-0h IAA whole plant Original data GEO bulk
144 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.75 >More info 0.41 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
145 cys-c1 root -0.67 >More info -0.48 >More info Root-WT roots Original data GEO bulk
146 low CO2 + light 0.54 >More info 0.61 >More info normal CO2 + light Original data GEO bulk
147 gai Flg22 1h -0.68 >More info -0.47 >More info Laer Flg22 1h leaf discs Original data GEO bulk
148 Fenclorim 4hr 0.64 >More info 0.51 >More info Acetone 4hr root Original data GEO bulk
149 WT 6H Cold 0.58 >More info 0.57 >More info WT control Original data GEO bulk
150 OE WRKY63.3 high light 0.57 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
151 WT +Pep2 2h 0.79 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
152 +1.6 mM Tween 20 1 h. 0.64 >More info 0.50 >More info +distilled water 1 h. Original data GEO bulk
153 9 hr Hypoxia IP RNA 0.69 >More info 0.45 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
154 WT +elf18 10h 0.66 >More info 0.47 >More info WT untreated elf18 Original data GEO bulk
155 bio4-1 mutant leaves 0.63 >More info 0.50 >More info WT leaves leaves Original data GEO bulk
156 15m.KCl 0.55 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
157 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.63 >More info -0.49 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
158 Rose Bengal 0.5 uM 0.60 >More info 0.52 >More info Control RB and PER Rose Bengal Original data
159 col-5 hrpA 4h 0.52 >More info 0.60 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
160 sfr6 drought -0.51 >More info -0.61 >More info WT drought All aerial tissue Original data GEO bulk
161 pad4-PsmES4326-24hpi -0.67 >More info -0.45 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
162 Mutant siz1-3 (Drought) 0.67 >More info 0.45 >More info Col-0 (Drought) Original data GEO bulk
163 ani1 T16 -0.64 >More info -0.48 >More info WT T16 root tissue Original data GEO bulk
164 erf104-ko Flg22 4h 0.54 >More info 0.58 >More info erf104-ko H2O 4h Original data GEO bulk
165 LTN008-2 aza-dc 0.77 >More info 0.35 >More info LTN012-2 Mock Original data
166 siz1-3 drought 0.67 >More info 0.45 >More info Col-0 drought Original data GEO bulk
167 12m.KCl 0.51 >More info 0.61 >More info To. KCl 14 day old Roots Original data GEO bulk
168 Col-0-avrB-6h 0.62 >More info 0.50 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
169 HopZ1a treated 0.63 >More info 0.49 >More info col Original data GEO bulk
170 myb61 xylem 0.49 >More info 0.63 >More info wt xylem xylem Original data GEO bulk
171 cs26 short-day -0.66 >More info -0.45 >More info Leaves-WT-SD leaf Original data GEO bulk
172 CDB1-Knockout -0.42 >More info -0.69 >More info WT Original data GEO bulk
173 Leafminer locally damaged thaliana seedlings 0.64 >More info 0.46 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
174 ein5-1 ski2-3 0.59 >More info 0.51 >More info Col-0 aerial tissue Original data
175 phr1 Root-Pi 0.67 >More info 0.43 >More info WT Root+Pi roots Original data GEO bulk
176 S58-2 0.59 >More info 0.51 >More info wt Original data GEO bulk
177 Lipopolysaccaride4 h (leaf) 0.62 >More info 0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
178 WT 3H Cold 0.43 >More info 0.67 >More info WT control Original data GEO bulk
179 dark +H2O2 -0.49 >More info -0.61 >More info dark 5 mM H2O2 seedling Original data GEO bulk
180 atgsnor1-1 -0.53 >More info -0.56 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
181 til1-1 22C 0.62 >More info 0.47 >More info Col-0 22C Original data GEO bulk
182 9 hr Hypoxia 1 hr recovery IP RNA 0.70 >More info 0.39 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
183 protoplasts T2 [flg22] 0.53 >More info 0.55 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
184 Col-0 under 4 days salt 0.71 >More info 0.37 >More info Col-0 under control 4 days salt treatment rosette Original data
185 Col-0 35S:MBS1 HL 3h -0.63 >More info -0.45 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
186 gpa1 -ABA GC -0.51 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
187 WUSp cells 0.61 >More info 0.47 >More info Protoplast Induced Original data GEO bulk
188 SA 4mM 0.72 >More info 0.36 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
189 Bur-0-1h IAA 0.68 >More info 0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
190 Laer pretreat GA Flg22 1h 0.37 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
191 Heat shock optimum 0.43 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
192 WT Bc inoculation 14h 0.73 >More info 0.34 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
193 col-5 DC3000 12h 0.61 >More info 0.46 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
194 dorn1-1 Root 100 mM ATP 30 min -0.42 >More info -0.65 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
195 Col-0 2HS 0.58 >More info 0.49 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
196 oas-a1.1 Cd 18h 0.59 >More info 0.48 >More info Cd 18h root Root Original data GEO bulk
197 ckh1 CK200 0.59 >More info 0.48 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
198 Col-0-3h IAA 0.70 >More info 0.37 >More info Col-0-0h IAA whole plant Original data GEO bulk
199 tor mutant glucose 0.59 >More info 0.48 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
200 Col whole leaf 5dpi 0.60 >More info 0.47 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
201 Col-0 (t-zeatin 3 h) -0.47 >More info -0.60 >More info Col-0 Original data Cytokinin treatment of seedlings
202 Laer pretreat JA Flg22 1h 0.72 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
203 irradiated leaf (WT 1d) 0.78 >More info 0.28 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
204 35S:RPS4 rrs1-11 8h -0.57 >More info -0.49 >More info 35S:RPS4 8h leaves Original data
205 P35S:rGRF3 0.69 >More info 0.37 >More info WS Original data GEO bulk
206 cpr5scv1 0.64 >More info 0.41 >More info WT(COL) Original data GEO bulk
207 seedling 6h after HZE WT 0.67 >More info 0.38 >More info seedling day 1 unirradiated WT 6h Original data
208 cs26 long day 0.61 >More info 0.44 >More info Leaves-WT-LD leaf Original data GEO bulk
209 Cold Stress 24 h (root) 0.61 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
210 Rsch 8h 0.43 >More info 0.62 >More info Rsch CA Leaves Original data
211 wrky33 Bc inoculation 14h 0.76 >More info 0.28 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
212 root protoplasts 40 mM NaCl 0.68 >More info 0.36 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
213 npr1 sni1 ssn2 SA -0.62 >More info -0.42 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
214 seedling 12h after HZE WT 0.62 >More info 0.42 >More info seedling day 1 unirradiated WT 12h Original data
215 (Col-0)+100 uM As 0.65 >More info 0.39 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
216 WT resupplied Pi 4h 0.69 >More info 0.35 >More info WT complete seedlings Original data
217 Cor 10h 0.60 >More info 0.44 >More info Mock 10h Cor Original data GEO bulk
218 4C 1h 0.39 >More info 0.65 >More info 4C 0h Original data GEO bulk
219 myb61 cork 0.47 >More info 0.57 >More info wt cork cork Original data GEO bulk
220 WT 30μM phosphate 8 hours. -0.49 >More info -0.55 >More info WT control (not supplemented). Original data
221 AsAKiin11 T1 -0.45 >More info -0.59 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
222 35:SUB1C 0.57 >More info 0.46 >More info WT whole seedling Original data GEO bulk
223 stn7-1 -0.60 >More info -0.43 >More info Col-0 rosette leaves Original data GEO bulk
224 21h-DC3000 avrRpm1 -0.54 >More info -0.49 >More info 21h-DC3000 leaves Original data GEO bulk
225 IAA/inhibitor B Treated 0.63 >More info 0.40 >More info IAA Treated Original data GEO bulk
226 ex1 flu dark 8hours/30 minute light 0.34 >More info 0.69 >More info col dark 8hours/30 minute light Original data GEO bulk
227 Col-0 INA 48h 0.61 >More info 0.41 >More info Col-0 MOCK 48h Original data GEO bulk
228 amiRAP aerobic -0.55 >More info -0.47 >More info WT aerobic aerobic Original data GEO bulk
229 35S:RPS4 eds1-2 24h -0.63 >More info -0.39 >More info 35S:RPS4 24h leaves Original data
230 vtc1 (II) 0.63 >More info 0.39 >More info Col (II) rosette Original data GEO bulk
231 (Col-0)+200 uM As 0.65 >More info 0.37 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
232 IRP1-OE-Ctrl--root 0.57 >More info 0.45 >More info COL-0-Ctrl--root root Original data
233 pvip1 pvip2 0.59 >More info 0.43 >More info Col-0 whole rosettes Original data GEO bulk
234 CMP 24hr 0.60 >More info 0.42 >More info Acetone 24hr root Original data GEO bulk
235 Bur-0-30min IAA 0.62 >More info 0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
236 GiantCell Root -0.51 >More info -0.51 >More info Control Root laser captured giant cells Original data GEO bulk
237 Col-0 Flg22 4h 0.44 >More info 0.58 >More info Col-0 H2O 4h Original data GEO bulk
238 agb1 gpa1 -ABA GC -0.45 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
239 seedling h S Exp -0.46 >More info -0.56 >More info seedling -S Exp seedling Original data
240 SHR-GR Time 1H Dex 0.55 >More info 0.46 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
241 M6PR transgenic 0mM NaCl 0.59 >More info 0.42 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
242 GR:KAN1 DEX Shade 0.54 >More info 0.47 >More info GR:KAN1 Mock Shade seedlings Original data
243 rosette leaves fdh 0.60 >More info 0.41 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
244 OE WRKY40.4 -0.51 >More info -0.50 >More info OE WRKY40.4 none leaf Original data GEO bulk
245 P.syringae AvrRpt2 4 h (leaf) 0.53 >More info 0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
246 S15-118 0.55 >More info 0.46 >More info wt Original data GEO bulk
247 wnk8-2 untreated -0.49 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
248 Shoot -Cs 0.46 >More info 0.55 >More info Control-shoot Original data GEO bulk
249 Col(gl) 0mM NaCl 0.56 >More info 0.44 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
250 atr mitomycin C 0.58 >More info 0.42 >More info WT mitomycin C shoot apical meristem Original data
251 Col(gl) leaf 0mM NaCl 0.56 >More info 0.44 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
252 safener treated 0.60 >More info 0.40 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
253 Shoot -K 0.55 >More info 0.45 >More info Control-shoot Original data GEO bulk
254 K starvation (shoot) 0.55 >More info 0.45 >More info Ws (shoot) Original data GEO bulk
255 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.40 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
256 CLO 4mM 0.66 >More info 0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
257 Seedling KUA1-IOX est 0.55 >More info 0.44 >More info Seedling KUA1-IOX mock Original data
258 gai MeJA 1h -0.59 >More info -0.40 >More info Laer MeJA 1h leaf discs Original data GEO bulk
259 SCR-GR Time 12H Dex 0.54 >More info 0.45 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
260 WT H2O2 3h 0.58 >More info 0.41 >More info WT water 3h 3h_H2O2 Original data GEO bulk
261 WT 90-105 min Xanthomonas 0.58 >More info 0.41 >More info WT T0 Original data GEO bulk
262 Apex mir-3TCP 14DAS -0.52 >More info -0.47 >More info Apex Col 14DAS Original data GEO bulk
263 Leafminer systemically damaged thaliana seedlings 0.62 >More info 0.37 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
264 TA induced 0.42 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
265 3x(p) 0.49 >More info 0.50 >More info 2x two week old seedlings Original data
266 del1-1 mutant 5d uninfected 0.51 >More info 0.47 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
267 8hr-pH4.5 0.60 >More info 0.38 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
268 arf2 mock 0.50 >More info 0.48 >More info Col mock Original data GEO bulk
269 Botrytis cinerea 48h 0.66 >More info 0.32 >More info control 48h Original data GEO bulk
270 shoot-10 μM DEX- 6 hr 0.53 >More info 0.45 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
271 Mutant arf2 (etiol) 0.50 >More info 0.48 >More info Col (etiol) Original data GEO bulk
272 WT-SA 0.60 >More info 0.38 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
273 Chitosan 3h Treatment 0.66 >More info 0.32 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
274 SAM SE agl15 agl18 double mutant 0.44 >More info 0.54 >More info SAM SE Col Original data GEO bulk
275 npr1-1 SA -0.59 >More info -0.38 >More info Col-0 SA complete seedling Original data
276 Col leaf 100mM NaCl 0.54 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
277 Col leaf 100mM NaCl 0.54 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
278 Col 100mM NaCl 0.54 >More info 0.43 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
279 IRP1-OE-Fe--shoot 0.63 >More info 0.34 >More info COL-0-Fe--shoot shoot Original data
280 IAA 0.5 h 0.57 >More info 0.40 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
281 cpr5npr1svi1 0.52 >More info 0.45 >More info WT(COL) Original data GEO bulk
282 Bur-0-3h IAA 0.60 >More info 0.37 >More info Bur-0h IAA whole plant Original data GEO bulk
283 rcf1-1 cold 12h 0.58 >More info 0.39 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
284 C58 3hpi 0.42 >More info 0.55 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
285 6h volatiles Sp. HRO-C48 0.40 >More info 0.57 >More info 6h untreated whole seedling Original data GEO bulk
286 AsAKiin11 T3 -0.62 >More info -0.34 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
287 HopZ1a treated ulp1c ulp1d 0.54 >More info 0.42 >More info col Original data GEO bulk
288 edr1 36 h powdery mildew 0.59 >More info 0.37 >More info Col-0 36 h powdery mildew Original data GEO bulk
289 M6PR transgenic leaf 0mM NaCl 0.50 >More info 0.46 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
290 tbf1-mock infiltration -0.61 >More info -0.35 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
291 col-5 DC3000 4h 0.37 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
292 3x(m) 0.38 >More info 0.58 >More info 2x two week old seedlings Original data
293 opr3 OPDA 0.5 h 0.28 >More info 0.67 >More info opr3 0 h Original data GEO bulk
294 Nicotinamide-85hr 0.51 >More info 0.44 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
295 ORS1 induced 0.53 >More info 0.42 >More info mock-induced rosette leaves Original data GEO bulk
296 ataf1-1 mutant Col-0 Un-inoculated -0.65 >More info -0.30 >More info WT Col-0 Un-inoculated Original data GEO bulk
297 Ts5 roots 2hr KCl control 0.61 >More info 0.34 >More info Col0 roots 2hr KCl control root Original data GEO bulk
298 WT powdery mildew 0.58 >More info 0.37 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
299 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.57 >More info -0.38 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
300 R. solani AG8 0.70 >More info 0.25 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
301 col-5 hrpA 2h 0.45 >More info 0.50 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
302 seedling -S Exp 0.36 >More info 0.59 >More info seedling FN Exp seedling Original data
303 Col upon hypoxia 6 hrs 0.57 >More info 0.37 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
304 SOS1 0mM NaCl 0.62 >More info 0.32 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
305 bio4-1 mutant watered00µM biotin leaves -0.61 >More info -0.33 >More info bio4-1 mutant leaves leaves Original data GEO bulk
306 pmr5 0.58 >More info 0.36 >More info Col-0 Original data GEO bulk
307 edr1 18 h powdery mildew 0.59 >More info 0.35 >More info Col-0 18 h powdery mildew Original data GEO bulk
308 Protoplast Induced 0.37 >More info 0.57 >More info Uninduced Original data GEO bulk
309 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
310 Col in Pi deficiency medium 0.41 >More info 0.53 >More info Col in control medium root Original data GEO bulk
311 Col-0 low oxygen 0.54 >More info 0.39 >More info Col-0 control low oxygen root Original data GEO bulk
312 Laer pretreat GA Flg22 0h 0.62 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
313 smg7b-1 0.61 >More info 0.32 >More info WT whole plant Original data GEO bulk
314 ABA DFPM 0.57 >More info 0.36 >More info control Original data GEO bulk
315 Kas-1 -Fe 24h -0.41 >More info -0.52 >More info Kas-1 +Fe 24h roots Original data GEO bulk
316 Kas -Fe 24h Roots -0.41 >More info -0.52 >More info Kas +Fe 24h Roots Original data GEO bulk
317 cpr5 0.54 >More info 0.38 >More info WT seedling Original data GEO bulk
318 vte2 leaves 48h LT 0.68 >More info 0.24 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
319 IMI 4mM 0.67 >More info 0.25 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
320 siliques AtHb1 control 0.40 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
321 WT Shoot-Pi 0.51 >More info 0.41 >More info WT Shoot+Pi shoots Original data GEO bulk
322 myb3 myb3r4d 0.57 >More info 0.35 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
323 21h-DC3000 hrpA -0.42 >More info -0.50 >More info 21h-DC3000 leaves Original data GEO bulk
324 WT drought 0.41 >More info 0.51 >More info WT control All aerial tissue Original data GEO bulk
325 seedling 24h after HZE WT 0.64 >More info 0.27 >More info seedling day 2 unirradiated WT 24h Original data
326 root endodermis -S -0.56 >More info -0.35 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
327 WT roots - Fe 0.66 >More info 0.25 >More info WT roots + Fe Roots Original data GEO bulk
328 rdr6-15 -0.53 >More info -0.38 >More info Col-0 Original data GEO bulk
329 Whole root - low pH 1H 0.36 >More info 0.55 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
330 Laer pretreat GA+JA Flg22 0h 0.61 >More info 0.30 >More info Laer pretreat water control leaf discs Original data GEO bulk
331 Col-0 mbs1-1 HL 3h -0.58 >More info -0.33 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
332 WT in -N 0.62 >More info 0.29 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
333 FHY3p dark+DEX -0.57 >More info -0.34 >More info FHY3p dark+mock Original data GEO bulk
334 Root wt CLE10 0.30 >More info 0.61 >More info Root wt CLE25 root tip Original data GEO bulk
335 oas-a1.1 Cd 24h 0.51 >More info 0.39 >More info Cd 24h root Shoot Original data GEO bulk
336 gh3.5-1D 48 hpi 0.63 >More info 0.27 >More info Col-0 uninoculated Original data GEO bulk
337 C24-3h IAA 0.55 >More info 0.35 >More info C24-0h IAA whole plant Original data GEO bulk
338 2hr continuous KCl and MSX control PeR cell 0.55 >More info 0.35 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
339 root epidermis and lateral root cap -S -0.40 >More info -0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
340 npr1-1 water -0.58 >More info -0.32 >More info Col-0 water complete seedling Original data
341 BLM+INA 0.58 >More info 0.32 >More info CK BLM and INA seedling Original data
342 gpa1 +ABA GC -0.31 >More info -0.59 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
343 eds16 whole leaf 5dpi -0.55 >More info -0.34 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
344 TaFLS overexpression line (OE2) -0.55 >More info -0.34 >More info Col-0 Rosette leaves Original data
345 miR393 0h -0.55 >More info -0.34 >More info WT 0h Leaf tissue Original data GEO bulk
346 whole roots 140 mM NaCl 1 hour 0.51 >More info 0.38 >More info whole roots standard Original data GEO bulk
347 abi4-102 (II) 0.53 >More info 0.36 >More info Col (II) rosette Original data GEO bulk
348 9 hr Hypoxia 1 hr recovery Total RNA 0.64 >More info 0.25 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
349 Mutant siz1-3 0.52 >More info 0.37 >More info Col-0 Original data GEO bulk
350 siz1-3 control 0.52 >More info 0.37 >More info Col-0 control Original data GEO bulk
351 35:SUB1A 0.62 >More info 0.27 >More info WT whole seedling Original data GEO bulk
352 UV 0.61 >More info 0.28 >More info WT aerial region Original data GEO bulk
353 Whole root - low pH 12H 0.53 >More info 0.36 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
354 2 hr Hypoxia IP RNA 0.59 >More info 0.30 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
355 B.cinerea 18 h infection 0.57 >More info 0.32 >More info Mock 18 h Original data Botrytis cinerea infection
356 Botrytis cinerea 18h 0.57 >More info 0.32 >More info control 18h Original data GEO bulk
357 vtc2 (I) 0.56 >More info 0.32 >More info Col (I) rosette Original data GEO bulk
358 ebs Pool 0.50 >More info 0.38 >More info Ler Pool seedling Original data GEO bulk
359 pepr1-1 Pepr2-3 +Pep2 10h -0.52 >More info -0.36 >More info WT +Pep2 10h Pep2 Original data GEO bulk
360 camta1/2/3 24h cold 0.51 >More info 0.37 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
361 vte2-1 3d vernalization 0.60 >More info 0.28 >More info WT 3d vernalization Original data GEO bulk
362 gun1gun5 far-red pretreated -0.53 >More info -0.35 >More info WT far-red pretreated Original data GEO bulk
363 arf2 brz -0.60 >More info -0.28 >More info arf2 mock Original data GEO bulk
364 Sulfometuron EC50 0.59 >More info 0.29 >More info Carrier Original data GEO bulk
365 sid2-1 cold -0.65 >More info -0.22 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
366 nas4x leaves + Fe 0.51 >More info 0.36 >More info WT leaves + Fe Leaves Original data GEO bulk
367 EBE-XVE +estradiol -0.28 >More info -0.59 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
368 root cells cortex 140mM NaCl 8 hours 0.54 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
369 hst5 0.58 >More info 0.28 >More info Col-0 Original data GEO bulk
370 root protophloem 40 mM NaCl 0.51 >More info 0.35 >More info root protophloem Original data GEO bulk
371 inhibitor B Treated 0.51 >More info 0.35 >More info Negative Control Original data GEO bulk
372 Laer Alternaria 3dpi -0.53 >More info -0.32 >More info Laer Control leaf discs Original data GEO bulk
373 seedling 24h after HZE atm-1 0.54 >More info 0.31 >More info seedling day 2 unirradiated atm-1 24h Original data
374 2 hr Hypoxia Total RNA 0.55 >More info 0.30 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
375 Nicotinamide-53hr 0.50 >More info 0.35 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
376 atmospheric CO2 high Mg shoot 0.50 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
377 P35S:rGRF1 -0.59 >More info -0.26 >More info Col-0 Original data GEO bulk
378 Cor 24h 0.57 >More info 0.28 >More info Mock 24h Cor Original data GEO bulk
379 Elevated CO2 AMPLE N NIGHT 0.56 >More info 0.28 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
380 C24-1h IAA 0.56 >More info 0.28 >More info C24-0h IAA whole plant Original data GEO bulk
381 (Ws-2)+100 uM As 0.52 >More info 0.32 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
382 sps1 -0.64 >More info -0.20 >More info WT seedling Original data GEO bulk
383 root callus inducing medium 48 h -0.54 >More info -0.30 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
384 Whole root - low pH 3H 0.34 >More info 0.50 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
385 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
386 9 hr Hypoxia Total RNA 0.59 >More info 0.25 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
387 pGL3::GL3-GR Dex 4 hours -0.53 >More info -0.30 >More info pGL3::GL3-GR mock 4 hours Original data GEO bulk
388 albino Ds13-2198-1 -0.55 >More info -0.28 >More info control Original data GEO bulk
389 cpr5npr1 0.51 >More info 0.32 >More info WT(COL) Original data GEO bulk
390 vtc2-1 -0.64 >More info -0.19 >More info Col-0 whole plant Original data GEO bulk
391 ga1-3 SCL3OE -0.54 >More info -0.29 >More info ga1-3 whole root Original data
392 Osmotic Stress 24 h (shoot) 0.57 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
393 R. solani AG2-1 0.61 >More info 0.22 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
394 Nicotinamide-89hr 0.52 >More info 0.30 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
395 9m.KCl 0.52 >More info 0.30 >More info To. KCl 14 day old Roots Original data GEO bulk
396 5-Triiodobenzoic acid3 h 0.65 >More info 0.17 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
397 6h +Pi -0.53 >More info -0.29 >More info 6h -Pi root Original data GEO bulk
398 Hydrogen Peroxide 500 uM 0.62 >More info 0.20 >More info Control RB and PER Hydrogen Peroxide Original data
399 FILp cells 0.50 >More info 0.32 >More info Protoplast Induced Original data GEO bulk
400 pho1 0.57 >More info 0.25 >More info Col2WT Original data GEO bulk
401 gpa1-4/agb1-2 clean-air 3h -0.13 >More info -0.69 >More info Col clean-air 3h clean-air Original data GEO bulk
402 ice1 control 0.50 >More info 0.31 >More info WT control Original data GEO bulk
403 GRX-overexpression seedlings MV -0.53 >More info -0.28 >More info WT seedlings MV Seedlings Original data GEO bulk
404 root cells endodermis 140mM NaCl 8 hours 0.52 >More info 0.29 >More info root cells endodermis standard 1 hour root cells endodermis Original data
405 Light 3day wt -0.68 >More info -0.13 >More info 0h wt Original data
406 root callus inducing medium 96 h -0.53 >More info -0.28 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
407 Col-0 37C 0.60 >More info 0.21 >More info Col-0 22C Original data GEO bulk
408 del1-1 5dpi 0.53 >More info 0.27 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
409 rcf1-1 cold 24h 0.54 >More info 0.26 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
410 Bay-0-30min IAA 0.51 >More info 0.29 >More info Bay-0-0h IAA whole plant Original data GEO bulk
411 WT 1wk -P 0.56 >More info 0.24 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
412 9m.KNO3 0.52 >More info 0.28 >More info To. KNO3 14 day old Roots Original data GEO bulk
413 WT 30μM arsenate 8 hours. 0.61 >More info 0.19 >More info WT control (not supplemented). Original data
414 dcl1-7 0.60 >More info 0.20 >More info Ler Original data GEO bulk
415 WT Root-Pi 0.58 >More info 0.22 >More info WT Root+Pi roots Original data GEO bulk
416 aba3-1 0.51 >More info 0.28 >More info wt Original data GEO bulk
417 ceh1 mutant 0.56 >More info 0.23 >More info Parent line Original data
418 upf3 0.51 >More info 0.28 >More info WT whole plant Original data GEO bulk
419 root callus inducing medium 24h -0.50 >More info -0.29 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
420 GA 120min 0.27 >More info 0.52 >More info CON120 GA 120 min. root tips Original data GEO bulk
421 mbd11 mutant thaliana 10-day-old seedling 0.52 >More info 0.26 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
422 camta3-2 0.55 >More info 0.23 >More info WT Original data GEO bulk
423 root cells cortex -Fe 0.52 >More info 0.26 >More info whole roots standard Original data GEO bulk
424 Cocultivation 8 hrs root 0.53 >More info 0.25 >More info Mock cocultivation 8 hrs root Root Original data
425 DC3000 24h 0.50 >More info 0.28 >More info Mock 24h DC3000 Original data GEO bulk
426 Nicotinamide-61hr 0.53 >More info 0.24 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
427 pnp1-1 1wk +P 0.61 >More info 0.16 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
428 D2O 0.56 >More info 0.21 >More info H2O seedling Original data GEO bulk
429 root longitudinal zone-3 low sulfur -0.53 >More info -0.23 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
430 wavy 0.58 >More info 0.18 >More info WT Original data GEO bulk
431 0h hml 0.55 >More info 0.21 >More info 0h wt Original data
432 IAA 1 h 0.51 >More info 0.25 >More info Mock 1 h Original data Basic hormone treatment of seedlings
433 Mature callus 0.59 >More info 0.17 >More info Young callus hypocotyls Original data GEO bulk
434 anac017-2 H2O2 3h -0.63 >More info -0.13 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
435 HRE1-RNAi20 hypoxia 6 hrs 0.52 >More info 0.24 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
436 Primisulfuron EC50 0.50 >More info 0.25 >More info Carrier (primisulfuron) Original data GEO bulk
437 spx1 spx2 no Pi 0.57 >More info 0.18 >More info WT no Pi seedlings Original data
438 rsa3-1 Na 24h 0.50 >More info 0.25 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
439 downy mildew cotyledons late stage 0.64 >More info 0.11 >More info mock inoculated Cotyledons Original data GEO bulk
440 anti-sense for AtAOX1a 0.57 >More info 0.18 >More info WT Original data GEO bulk
441 gai Control 0.62 >More info 0.12 >More info Laer Control leaf discs Original data GEO bulk
442 gir flower 33d 0.55 >More info 0.19 >More info Col-7 flower 33d flower Original data GEO bulk
443 Col-0 C2H4 24h 0.50 >More info 0.24 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
444 HairpinZ 4 h (leaf) 0.76 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
445 root cells cortex 140mM NaCl 20 hours 0.51 >More info 0.22 >More info root cells cortex standard 1 hour root cells cortex Original data
446 root cells cortex 140mM NaCl 48 hours 0.50 >More info 0.23 >More info root cells cortex standard 1 hour root cells cortex Original data
447 Nicotinamide-73hr 0.51 >More info 0.22 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
448 csn5 (csn5a-2 csn5b) light 0.54 >More info 0.18 >More info WT light Original data GEO bulk
449 -Sulfate 24 h 0.18 >More info 0.54 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
450 agb1 -ABA LF 0.11 >More info 0.61 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
451 toc1-1-49hr 0.55 >More info 0.16 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
452 Elevated CO2 AMPLE N DAY 0.56 >More info 0.14 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
453 35S-MIF1 dark grown 0.51 >More info 0.19 >More info Dark-grown WT control Original data GEO bulk
454 plant (tga2-5-6) 4h phytoprostane A1 0.52 >More info 0.18 >More info plant (tga2-5-6) 4h control Original data GEO bulk
455 C24 UV1 -0.57 >More info -0.13 >More info C24 mock UV seedling Original data
456 Nicotinamide-57hr 0.52 >More info 0.18 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
457 Nicotinamide-65hr 0.54 >More info 0.15 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
458 mbd6 mutant thaliana 10-day-old seedling 0.54 >More info 0.14 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
459 WT mitomycin C 0.55 >More info 0.13 >More info WT mock shoot apical meristem Original data
460 whole roots -Fe 48 hour 0.52 >More info 0.16 >More info whole roots standard Original data GEO bulk
461 high R/FR JA spray -0.53 >More info -0.14 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
462 SA 0.51 >More info 0.16 >More info WT mock Whole seedling Original data GEO bulk
463 cat2-long-day 2d -0.50 >More info -0.16 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
464 FLIGHT TAGESB plate6 SHOOTS 0.50 >More info 0.16 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
465 FLIGHT TAGESB plate 0.55 >More info 0.11 >More info GROUND CONTROL TAGESB plate Original data
466 triploid female excess -0.16 >More info -0.50 >More info tetraploid Original data GEO bulk
467 Col-0 WT HL 3h 0.52 >More info 0.13 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
468 cat2-hCO2 -0.55 >More info -0.10 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
469 epiF3 -0.56 >More info -0.09 >More info WT Col-0 aerial part Original data
470 ckh1 CK25 0.55 >More info 0.10 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
471 mkk1 24h BTH rep 0.13 >More info 0.52 >More info Col-0 24h BTH rep Original data GEO bulk
472 atmyc2 Seedling BL -0.14 >More info -0.51 >More info WT Seedling BL Original data GEO bulk
473 Mh0 UV -0.58 >More info -0.07 >More info Mh0 mock UV seedling Original data
474 wrky33 mock 0.57 >More info 0.08 >More info WT mock 14 hour mock control leaves Original data
475 spx1 spx2 complete 0.51 >More info 0.13 >More info WT complete seedlings Original data
476 shoots WT 0uM Fe 0.56 >More info 0.08 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
477 Laer pretreat JA Flg22 2h 0.63 >More info 0.01 >More info Laer pretreat water control leaf discs Original data GEO bulk
478 WT leaves - Fe 0.51 >More info 0.12 >More info WT leaves + Fe Leaves Original data GEO bulk
479 Atwrky63 -0.61 >More info -0.01 >More info Col0 none leaf Original data GEO bulk
480 irradiated leaf (cmt 1d) 0.60 >More info 0.02 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
481 calcicole ecotype Cal-0 0.57 >More info 0.05 >More info Col-4 1 mM CaCl2 Original data GEO bulk
482 seedlings +5AC 0.59 >More info 0.03 >More info control seedlings 10-day old whole seedling Original data GEO bulk
483 Dark 6h ivd 0.50 >More info 0.12 >More info 0h ivd Original data
484 glk1 glk2 GLK1-GR +DEX 24h -0.54 >More info -0.08 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
485 penta MeJA 1h 0.69 >More info -0.07 >More info Laer MeJA 1h leaf discs Original data GEO bulk
486 toc1-1-65hr 0.50 >More info 0.11 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
487 Nicotinamide-81hr 0.51 >More info 0.10 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
488 P. infestans 6 h (leaf) 0.75 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
489 Shoot P recovery 0.51 >More info 0.09 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
490 gpa1-4/agb1-2 ozone 2d -0.03 >More info -0.57 >More info Col ozone 2d ozone Original data GEO bulk
491 irradiated leaf (WT 5d) 0.58 >More info 0.01 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
492 CLV3n cells 0.53 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
493 penta Flg22 2h 0.51 >More info 0.06 >More info Laer Flg22 2h leaf discs Original data GEO bulk
494 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
495 toc1-1-77hr 0.70 >More info -0.13 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
496 pmr5 0.57 >More info 0.00 >More info Col-0 rosette Original data GEO bulk
497 Col-0 24hpi A. brassicicola 0.52 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
498 MPK6 ox Shoot Hypoxia 0.57 >More info -0.03 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
499 control leaf (cmt 5d) -0.50 >More info -0.02 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
500 Col PSTDC3000 24h 0.63 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
501 12h-DC3000 avrRpm1 0.05 >More info -0.53 >More info 12h-DC3000 leaves Original data GEO bulk
502 Col-0 SA 0.56 >More info -0.09 >More info Col-0 Original data GEO bulk
503 seed germinating in countinuous light 24h SL -0.24 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
504 bri1-116 -0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
505 pnp1-1 1wk -P 0.50 >More info -0.11 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
506 gacA 0.17 >More info -0.52 >More info PA14 seedlings Original data GEO bulk
507 Mutant arf2-6 -0.53 >More info 0.22 >More info Col Original data GEO bulk
508 Light 3day hml -0.55 >More info 0.26 >More info 0h hml Original data
509 Shoot apex inflorescence (after bolting) -0.36 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
510 spx1 spx2 resupplied Pi 4h -0.52 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
511 cdpk6-yfp 0.51 >More info -0.35 >More info Kan seedlings Original data GEO bulk