4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT Root-Pi
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List of experiments correlated with "WT Root-Pi"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT Root-Pi		 Correlation to
WT Root-Pi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT Root-Pi 1.00 >More info 1.00 >More info WT Root+Pi roots Original data GEO bulk
2 phr1 Root-Pi 0.85 >More info 0.82 >More info WT Root+Pi roots Original data GEO bulk
3 WT no Pi 0.84 >More info 0.74 >More info WT complete seedlings Original data
4 WT 1mM phosphate 8 hours. -0.79 >More info -0.78 >More info WT control (not supplemented). Original data
5 Root -P 0.74 >More info 0.81 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
6 Root P recovery -0.73 >More info -0.81 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
7 WT Shoot-Pi 0.79 >More info 0.75 >More info WT Shoot+Pi shoots Original data GEO bulk
8 WT 30μM phosphate 8 hours. -0.71 >More info -0.78 >More info WT control (not supplemented). Original data
9 phr1 phl1 Shoot-Pi -0.71 >More info -0.65 >More info WT Shoot-Pi shoots Original data GEO bulk
10 WT 1wk -P 0.62 >More info 0.72 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
11 P35S:rGRF1 -0.64 >More info -0.64 >More info Col-0 Original data GEO bulk
12 pho1 0.59 >More info 0.68 >More info Col2WT Original data GEO bulk
13 Shoot -P 0.45 >More info 0.78 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
14 WT resupplied Pi 4h 0.62 >More info 0.60 >More info WT complete seedlings Original data
15 Split KNO3 roots - 2days -0.52 >More info -0.67 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
16 OxPHR1 -Pi-DEX-CHX 0.57 >More info 0.56 >More info phr1 -Pi-DEX-CHX Original data GEO bulk
17 ISOXABEN -0.52 >More info -0.57 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
18 Split KNO3 roots - 2hours -0.38 >More info -0.68 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
19 hog1-7 -0.59 >More info -0.46 >More info wt whole seedling Original data GEO bulk
20 mutant-line1135 -0.62 >More info -0.43 >More info WT-control whole plant Original data GEO bulk
21 ddm1-12 -0.62 >More info -0.43 >More info wt whole seedling Original data GEO bulk
22 mutant-line774 -0.59 >More info -0.46 >More info WT-control whole plant Original data GEO bulk
23 grf1/grf2/grf3 0.49 >More info 0.55 >More info WS Original data GEO bulk
24 WT in -N 0.53 >More info 0.49 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
25 xyl-grown cell culture- 1h 1mM Suc 0.31 >More info 0.71 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
26 xyl-grown cell culture- 1h 1mM Fru 0.46 >More info 0.56 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
27 Control KNO3 roots - 2days -0.45 >More info -0.56 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
28 Col in Pi deficiency medium 0.39 >More info 0.60 >More info Col in control medium root Original data GEO bulk
29 root - 04% oxygen - 48h -0.28 >More info -0.67 >More info root - 21% oxygen - 48h Original data GEO bulk
30 seedlings-week-old RECA1-overexpressing
transgenic		 0.52 >More info 0.42 >More info seedlings-week-old Col-0 seedlings Original data
31 8 hr nitrate -0.39 >More info -0.54 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
32 Prohexadione 3 h 0.36 >More info 0.57 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
33 WT drought 0.35 >More info 0.58 >More info WT control All aerial tissue Original data GEO bulk
34 ABA JA 24h 0.28 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
35 Shoot P recovery -0.39 >More info -0.53 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
36 Col0-PsmES4326-24hpi 0.29 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
37 stn7-1 -0.34 >More info -0.55 >More info Col-0 rosette leaves Original data GEO bulk
38 rosettes atx drought 0.39 >More info 0.50 >More info rosettes atx watered Original data GEO bulk
39 Split KNO3 roots - 8hours -0.32 >More info -0.57 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
40 shoot control p35S 0.16 >More info 0.72 >More info shoot control total Original data GEO bulk
41 Salt Stress 24 h (root) 0.37 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
42 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
43 WT 3H Cold 0.20 >More info 0.66 >More info WT control Original data GEO bulk
44 3x(m) 0.11 >More info 0.73 >More info 2x two week old seedlings Original data
45 JA 24h 0.33 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
46 FLIGHT TAGESB plate6 ROOTS 0.24 >More info 0.59 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
47 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
48 iron minus 24h -0.11 >More info -0.71 >More info iron +24h root Original data GEO bulk
49 WT+chitooctaose 0.22 >More info 0.58 >More info WT+water chitooctaose seedlings Original data GEO bulk
50 shoot hypoxia p35S 0.04 >More info 0.75 >More info shoot hypoxia total Original data GEO bulk
51 Col-0 +ABA LF 0.26 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
52 bHLH122 ox -0.14 >More info -0.65 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
53 CDB1-Knockout -0.18 >More info -0.61 >More info WT Original data GEO bulk
54 root epidermis and lateral root cap -S -0.19 >More info -0.58 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
55 myb61 xylem 0.11 >More info 0.66 >More info wt xylem xylem Original data GEO bulk
56 agb1 gpa1 -ABA LF 0.10 >More info 0.66 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
57 Leaf wounded 0.12 >More info 0.64 >More info Leaf control vegetative leaf Original data GEO bulk
58 toc1-1-85hr -0.18 >More info -0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
59 Ws 2h KNO3 -0.22 >More info -0.52 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
60 T101D 10mM NH4NO3 0.24 >More info 0.50 >More info col 10mM NH4NO3 Root Original data
61 21h-DC3000 hrpA -0.13 >More info -0.60 >More info 21h-DC3000 leaves Original data GEO bulk
62 12m.KCl 0.14 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
63 35S:RPS4 eds1-2 2h -0.19 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
64 AsAKiin11 T2 0.19 >More info 0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
65 Col BTH 0.04 >More info 0.67 >More info Col rosettes Original data GEO bulk
66 Imbibed 1 h (seed) 0.11 >More info 0.60 >More info Dry seed Original data Time course of early seed germination
67 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
68 Kas-1 -Fe 24h -0.14 >More info -0.57 >More info Kas-1 +Fe 24h roots Original data GEO bulk
69 Kas -Fe 24h Roots -0.14 >More info -0.57 >More info Kas +Fe 24h Roots Original data GEO bulk
70 root longitudinal zone-3 -Fe -0.12 >More info -0.57 >More info root longitudinal zone-3 standard Original data GEO bulk
71 Whole root - S 3H 0.17 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
72 upb1-1 elongation zone 0.18 >More info 0.50 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
73 FarRed Light 45min -0.16 >More info -0.51 >More info White Light 45min Original data Light treatments
74 250uM K-nitrate 20min roots -0.16 >More info -0.51 >More info 250uM KCl 20min roots Roots Original data GEO bulk
75 Pst-DC3000(avrRpm1)-4hpi 0.16 >More info 0.51 >More info Pst-DC3000-4hpi Original data GEO bulk
76 HARAP aerobic -0.10 >More info -0.57 >More info WT aerobic aerobic Original data GEO bulk
77 20m.KCl 0.16 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
78 Leafminer damaged seedlings 0.10 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
79 L2.5 mutant 0.10 >More info 0.55 >More info Wt Original data GEO bulk
80 Hypoxic e1 ate -0.11 >More info -0.53 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
81 Col-0 (t-zeatin 3 h) -0.11 >More info -0.52 >More info Col-0 Original data Cytokinin treatment of seedlings
82 Red/FR Light45min 0.03 >More info 0.60 >More info FarRed Light 45min Original data Light treatments
83 ulp1c ulp1d 0.11 >More info 0.52 >More info col Original data GEO bulk
84 1h +Pi -0.08 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
85 sim smr1 -0.11 >More info -0.52 >More info WT seedling Original data GEO bulk
86 siliques AtHb1 control 0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
87 Chemically 0.01 >More info -0.63 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
88 rosette Light Wounded 0.10 >More info 0.51 >More info rosette Light Control Original data GEO bulk
89 SHR-GR Time 3H Dex -0.08 >More info -0.53 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
90 WT-Dry 0.09 >More info 0.52 >More info WT-CK dehydration treatment 1h Original data
91 myb3 myb3r4d 0.02 >More info 0.58 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
92 phosphate-starved 0.09 >More info 0.51 >More info control shoot tissue Original data GEO bulk
93 npr1-3 MOCK 48h -0.02 >More info -0.57 >More info Col-0 MOCK 48h Original data GEO bulk
94 ABA 0.09 >More info 0.50 >More info control Original data GEO bulk
95 ahg1-1 0.08 >More info 0.51 >More info ABA control Original data GEO bulk
96 ckh1 CK200 0.03 >More info 0.55 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
97 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
98 Dark 0.02 >More info -0.60 >More info Control Original data GEO bulk
99 root - 08% oxygen - 30min -0.06 >More info -0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
100 SCR-GR Time 1H Dex 0.03 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
101 WT roots - Fe -0.05 >More info -0.52 >More info WT roots + Fe Roots Original data GEO bulk
102 root stele -S -0.05 >More info -0.52 >More info root stele pH5.7 Original data GEO bulk
103 35S:MYB28 like miR -0.03 >More info -0.54 >More info WT for miR Original data GEO bulk
104 35S:ATR1 like miR 0.08 >More info -0.65 >More info WT for miR Original data GEO bulk
105 Heat shock optimum -0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
106 ABA SA 24h -0.03 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
107 myb61 cork 0.03 >More info 0.50 >More info wt cork cork Original data GEO bulk
108 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
109 bbx24 in Simulated Shade -0.01 >More info 0.52 >More info WT in simulated shade shade seedling Original data
110 root longitudinal zone-4 -Fe 0.02 >More info -0.52 >More info root longitudinal zone-4 standard Original data GEO bulk
111 estradiole-induced ANAC059 -0.07 >More info 0.57 >More info transgenic (empty vector inducible system) Original data GEO bulk
112 GRX-overexpression seedlings MV -0.05 >More info 0.53 >More info WT seedlings MV Seedlings Original data GEO bulk
113 Shoot apex inflorescence (after bolting) -0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
114 pepr1-1 Pepr2-3 untreated 0.06 >More info -0.51 >More info WT untreated untreated Original data GEO bulk