4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S:ATR1 like miR
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List of experiments correlated with "35S:ATR1 like miR"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S:ATR1 like miR		 Correlation to
35S:ATR1 like miR		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S:ATR1 like miR 1.00 >More info 1.00 >More info WT for miR Original data GEO bulk
2 35S:MYB28 like miR 0.92 >More info 0.91 >More info WT for miR Original data GEO bulk
3 shoot hypoxia p35S -0.66 >More info -0.66 >More info shoot hypoxia total Original data GEO bulk
4 shoot control p35S -0.66 >More info -0.62 >More info shoot control total Original data GEO bulk
5 GRX-overexpression seedlings MV -0.58 >More info -0.59 >More info WT seedlings MV Seedlings Original data GEO bulk
6 shoot hypoxia pRBCS -0.65 >More info -0.50 >More info shoot hypoxia total Original data GEO bulk
7 Cor 24h -0.58 >More info -0.57 >More info Mock 24h Cor Original data GEO bulk
8 shoot hypoxia pGL2 -0.61 >More info -0.54 >More info shoot hypoxia total Original data GEO bulk
9 xyl-grown cell culture- 1h 1mM Suc -0.46 >More info -0.65 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
10 MYB76 OE -0.74 >More info -0.36 >More info WT for MYB29/76 Original data GEO bulk
11 Tsu -Fe 48h Shoots -0.67 >More info -0.42 >More info Tsu +Fe 24h Shoots Original data GEO bulk
12 Propiconazole 3 h -0.51 >More info -0.56 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
13 MYB29 OE -0.74 >More info -0.32 >More info WT for MYB29/76 Original data GEO bulk
14 shoot control pGL2 -0.65 >More info -0.41 >More info shoot control total Original data GEO bulk
15 ein5-1 ski2-3 -0.73 >More info -0.31 >More info Col-0 aerial tissue Original data
16 oas-a1.1 Cd 24h -0.63 >More info -0.40 >More info Cd 24h root Shoot Original data GEO bulk
17 abh1 -ABA -0.67 >More info -0.35 >More info Col-0 -ABA Original data GEO bulk
18 root control pRPL11C -0.67 >More info -0.35 >More info root control total control root Original data GEO bulk
19 shoot hypoxia pSUC2 -0.59 >More info -0.41 >More info shoot hypoxia total Original data GEO bulk
20 sid2-2 safener 0.70 >More info 0.29 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
21 Col-0 INA 48h -0.53 >More info -0.46 >More info Col-0 MOCK 48h Original data GEO bulk
22 shoot control pRBCS -0.66 >More info -0.32 >More info shoot control total Original data GEO bulk
23 shoot control pSultr2:2 -0.60 >More info -0.38 >More info shoot control total Original data GEO bulk
24 Col-0 INA 6d -0.53 >More info -0.45 >More info Col-0 MOCK 6d Original data GEO bulk
25 P-chlorophenoxy- isobutyric acid 3 h -0.47 >More info -0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
26 eds16 whole leaf 0h UI 0.53 >More info 0.44 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
27 Shoot apex inflorescence (after bolting) 0.32 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
28 INA -0.37 >More info -0.60 >More info CK INA seedling Original data
29 sicy-192 gun1-101 cotyledons -0.67 >More info -0.29 >More info WT cotyledons cotyledons Original data
30 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.61 >More info -0.34 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
31 6xX2x interploidy cross -0.66 >More info -0.28 >More info 2xX2x cross Original data GEO bulk
32 eds16 whole leaf 7d UI 0.43 >More info 0.51 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
33 root control p35S -0.66 >More info -0.27 >More info root control total control root Original data GEO bulk
34 psae1-3 0.60 >More info 0.33 >More info WS rosette leaves Original data GEO bulk
35 camta3-2 -0.36 >More info -0.57 >More info WT Original data GEO bulk
36 cop1 Seedling Dark 0.59 >More info 0.33 >More info WT Seedling Dark Original data GEO bulk
37 Light 3day wt 0.56 >More info 0.34 >More info 0h wt Original data
38 eds16 whole leaf 5dpi 0.51 >More info 0.39 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
39 root hypoxia pRPL11C -0.64 >More info -0.26 >More info root hypoxia total hypoxia root Original data GEO bulk
40 shoot control pSUC2 -0.54 >More info -0.36 >More info shoot control total Original data GEO bulk
41 bri1-116 0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
42 eds16 whole leaf 6hpi 0.59 >More info 0.31 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
43 root control pSUC2 -0.60 >More info -0.30 >More info root control total control root Original data GEO bulk
44 Mutant cry1 (High Light) 0.63 >More info 0.26 >More info Col-0 (High Light) Original data GEO bulk
45 cry1 high light 0.63 >More info 0.26 >More info Col-O high light Original data GEO bulk
46 root hypoxia p35S -0.60 >More info -0.29 >More info root hypoxia total hypoxia root Original data GEO bulk
47 root control pWOL -0.64 >More info -0.24 >More info root control total control root Original data GEO bulk
48 root control pSultr2:2 -0.59 >More info -0.29 >More info root control total control root Original data GEO bulk
49 W(Liq) L-AOPP -0.58 >More info -0.29 >More info W(Liq) Mock whole plant Original data GEO bulk
50 camta3-1 -0.33 >More info -0.52 >More info WT Original data GEO bulk
51 CCA1-ox 6am non-polysomal 0.34 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
52 Mutant arf2-6 0.63 >More info 0.22 >More info Col Original data GEO bulk
53 lateral root cap-columella pBRN2 0h BL 0.70 >More info 0.15 >More info WR 35S 0h BL brassinosteroid root Original data
54 WT in -N -0.61 >More info -0.24 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
55 WT Seedling BL 0.55 >More info 0.29 >More info WT Seedling Dark Original data GEO bulk
56 root control pGL2 -0.64 >More info -0.20 >More info root control total control root Original data GEO bulk
57 R. solani AG2-1 -0.59 >More info -0.25 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
58 Elevated CO2 expanding leaf -0.30 >More info -0.53 >More info Ambient CO2 expanding leaf expanding leaf Original data
59 rosette Dark Wounded -0.26 >More info -0.57 >More info rosette Dark Control Original data GEO bulk
60 phyB mutant 22C 10hrs 0.22 >More info 0.60 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
61 stn7-1 0.55 >More info 0.26 >More info Col-0 rosette leaves Original data GEO bulk
62 Tsu -Fe 24h Shoots -0.55 >More info -0.26 >More info Tsu +Fe 24h Shoots Original data GEO bulk
63 seed germinating in countinuous light 24h SL 0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
64 NahG 0.15 >More info 0.65 >More info Col-0 Leaves Original data GEO bulk
65 root hypoxia pWOL -0.57 >More info -0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
66 35S:PCO1 hypoxia 0.54 >More info 0.25 >More info WT hypoxia whole rosette Original data
67 upf1 -0.51 >More info -0.27 >More info WT whole plant Original data GEO bulk
68 polysome mRNA eif3k -0.54 >More info -0.24 >More info polysome mRNA WT aerial part Original data GEO bulk
69 total mRNA eif3k -0.61 >More info -0.17 >More info total mRNA WT aerial part Original data GEO bulk
70 GRX-overexpression seedlings control -0.59 >More info -0.19 >More info WT seedlings control Seedlings Original data GEO bulk
71 LTN008-2 aza-dc -0.54 >More info -0.24 >More info LTN012-2 Mock Original data
72 hira-protoplast 0.58 >More info 0.19 >More info WT-protoplast protoplast Original data
73 Al treated -0.56 >More info -0.21 >More info control Original data GEO bulk
74 170G5-16 -0.60 >More info -0.17 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
75 Lip0 UV -0.50 >More info -0.27 >More info Lip0 mock UV seedling Original data
76 Mh0 UV 0.59 >More info 0.17 >More info Mh0 mock UV seedling Original data
77 20d after anthesis -0.52 >More info -0.24 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
78 pad2-PsmES4326-24hpi 0.51 >More info 0.25 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
79 Col ozone 2d -0.52 >More info -0.23 >More info Col clean-air 2d ozone Original data GEO bulk
80 WT roots - Fe -0.50 >More info -0.25 >More info WT roots + Fe Roots Original data GEO bulk
81 ga1-3 SCL3OE 0.52 >More info 0.23 >More info ga1-3 whole root Original data
82 AFB1 0h 0.25 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
83 root control pPEP -0.69 >More info -0.05 >More info root control total control root Original data GEO bulk
84 gpa1-4/agb1-2 clean-air 3h 0.21 >More info 0.53 >More info Col clean-air 3h clean-air Original data GEO bulk
85 C2H2 ZF TDNA mutant -0.62 >More info -0.11 >More info Col-WT mature pollen Original data GEO bulk
86 myb61 xylem -0.20 >More info -0.53 >More info wt xylem xylem Original data GEO bulk
87 abi3-6 12 DAF Seed 0.59 >More info 0.13 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
88 phr1 phl1 Shoot-Pi 0.55 >More info 0.16 >More info WT Shoot-Pi shoots Original data GEO bulk
89 FarRed Light 45min 0.51 >More info 0.20 >More info White Light 45min Original data Light treatments
90 whole roots 140 mM NaCl 1 hour -0.54 >More info -0.16 >More info whole roots standard Original data GEO bulk
91 2hr continuous KNO3 ECR cell -0.53 >More info -0.17 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
92 phr1 Shoot-Pi 0.52 >More info 0.18 >More info WT Root-Pi shoots Original data GEO bulk
93 Mutant siz1-3 -0.50 >More info -0.20 >More info Col-0 Original data GEO bulk
94 AtMYB30-as 90-105 min Xanthomonas -0.51 >More info -0.19 >More info WT 90-105 min Xanthomonas Original data GEO bulk
95 siz1-3 control -0.50 >More info -0.20 >More info Col-0 control Original data GEO bulk
96 Apex 14DAS -0.64 >More info -0.05 >More info Control for tissue data Original data GEO bulk
97 ISOXABEN 0.64 >More info 0.05 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
98 root hypoxia pPEP -0.60 >More info -0.09 >More info root hypoxia total hypoxia root Original data GEO bulk
99 CabpBVR2 -0.51 >More info -0.18 >More info WT Original data GEO bulk
100 Oxidative Stress 3 h (root) 0.55 >More info 0.13 >More info Stress mock 3 h (root) Original data Stress treatments
101 Total RNA 35S:AtCSP1-FH1 cold -0.52 >More info -0.16 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
102 9 hr Hypoxia 1 hr recovery IP RNA -0.51 >More info -0.17 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
103 Imidazolinone EC50 -0.58 >More info -0.10 >More info Carrier (Imidazolinone) Original data GEO bulk
104 root hypoxia pSHR -0.50 >More info -0.18 >More info root hypoxia total hypoxia root Original data GEO bulk
105 grf1/grf2/grf3 -0.60 >More info -0.07 >More info WS Original data GEO bulk
106 gun1-9 norflurazon -0.51 >More info -0.15 >More info gun1-9 control Original data GEO bulk
107 seedlings +5AC -0.55 >More info -0.11 >More info control seedlings 10-day old whole seedling Original data GEO bulk
108 Shoot -Cs -0.16 >More info -0.50 >More info Control-shoot Original data GEO bulk
109 dark +lincomycin 0.50 >More info 0.15 >More info dark -lincomycin Original data GEO bulk
110 Stem tissue 5 days NAA -0.54 >More info -0.11 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
111 4tga safener 0.51 >More info 0.14 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
112 35S::Zat12 0.51 >More info 0.14 >More info WT Original data GEO bulk
113 C24 UV1 0.55 >More info 0.10 >More info C24 mock UV seedling Original data
114 Col-0 DEX Shade 0.65 >More info -0.01 >More info Col-0 DEX WL seedlings Original data
115 GST-overexpression seedlings control -0.53 >More info -0.11 >More info WT seedlings control Seedlings Original data
116 root cap pGL2(QC pSCRBRI1) 0h BL 0.53 >More info 0.10 >More info WR 35S 0h BL brassinosteroid root Original data
117 root control pSHR -0.51 >More info -0.12 >More info root control total control root Original data GEO bulk
118 pif3 Dark 0h 0.55 >More info 0.08 >More info WT Dark 0h etiolated seedling Original data GEO bulk
119 whole roots -Fe 72 hour -0.50 >More info -0.12 >More info whole roots standard Original data GEO bulk
120 Fe starvation 72 h -0.50 >More info -0.12 >More info Control Original data GEO bulk
121 atgsnor1-1 0.51 >More info 0.10 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
122 ams -0.50 >More info -0.11 >More info WT anther Original data GEO bulk
123 apk1 apk2 -0.57 >More info -0.04 >More info Col0-control whole rosette Original data GEO bulk
124 rid4 IBA 0.57 >More info 0.04 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
125 axr2-BR 0.58 >More info 0.03 >More info BR BR dark-grown seedlings Original data GEO bulk
126 atmyc2 cop1 Seedling Dark 0.52 >More info 0.08 >More info WT Seedling Dark Original data GEO bulk
127 P35S:rGRF1 0.58 >More info 0.02 >More info Col-0 Original data GEO bulk
128 Ler hypocotyl -0.52 >More info -0.08 >More info wt hypocotyl hypocotyl Original data GEO bulk
129 rgs1+sucrose -0.54 >More info -0.05 >More info WT+sucrose rosette leaves Original data GEO bulk
130 F1 whole seedlings root -0.52 >More info -0.07 >More info Col whole seedlings root Seedlings Original data GEO bulk
131 non-polysome mRNA eif3k -0.55 >More info -0.04 >More info non-polysome mRNA WT aerial part Original data GEO bulk
132 60m light -0.07 >More info -0.52 >More info before light whole seedlings Original data GEO bulk
133 overexpresser LBD38 in -N 0.51 >More info 0.08 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
134 rosette Light Wounded -0.09 >More info -0.50 >More info rosette Light Control Original data GEO bulk
135 SIV pollen tube 0.54 >More info 0.04 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
136 35S::Zat12+H2O2 -0.50 >More info -0.08 >More info WT+H2O2 H2O2 Original data GEO bulk
137 WT Root-Pi -0.65 >More info 0.08 >More info WT Root+Pi roots Original data GEO bulk
138 bZIP TDNA mutant -0.54 >More info -0.03 >More info Col-WT mature pollen Original data GEO bulk
139 root cap pGL2(QC pSCRBRI1) 8h BL -0.57 >More info 0.00 >More info root cap pGL2(QC pSCRBRI1) 0h BL brassinosteroid root Original data
140 bZIP1ko mutant N-Light- 0.50 >More info 0.06 >More info WT-sib N-Light- whole plant Original data GEO bulk
141 Dark 6h hml 0.56 >More info -0.01 >More info 0h hml Original data
142 sps1 0.54 >More info -0.00 >More info WT seedling Original data GEO bulk
143 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
144 overexpresser LBD37 in -N 0.53 >More info -0.00 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
145 4xX2x interploidy cross -0.53 >More info 0.00 >More info 2xX2x cross Original data GEO bulk
146 CLV3n cells -0.56 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
147 Imbibed 3 h (seed) -0.60 >More info 0.09 >More info Dry seed Original data Time course of early seed germination
148 (Col-0)+200 uM As -0.52 >More info 0.01 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
149 ML (Mature leaves) 35DAS -0.53 >More info 0.03 >More info Control for tissue data Original data GEO bulk
150 Ba1 UV -0.52 >More info 0.03 >More info Ba1 mock UV seedling Original data
151 root epidermis and lateral root cap 40 mM NaCl 0.51 >More info -0.02 >More info root epidermis and lateral root cap Original data GEO bulk
152 30m light 0.03 >More info -0.52 >More info before light whole seedlings Original data GEO bulk
153 pif4pif5 mut 1h FR -0.51 >More info 0.03 >More info WT 1h FR Original data GEO bulk
154 EL (leaves 1-2) 14DAS -0.52 >More info 0.05 >More info Control for tissue data Original data GEO bulk
155 fil-8 yab3-2 yab5-1 -0.58 >More info 0.11 >More info wt Apices Original data GEO bulk
156 shoot hypoxia pKAT1 -0.52 >More info 0.06 >More info shoot hypoxia total Original data GEO bulk
157 FILp cells -0.57 >More info 0.11 >More info Protoplast Induced Original data GEO bulk
158 Heat Recovery 24 h (root) -0.53 >More info 0.08 >More info Stress mock 24 h (root) Original data Stress treatments
159 whole roots 140 mM NaCl 16 hour -0.52 >More info 0.08 >More info whole roots standard Original data GEO bulk
160 WT Shoot-Pi -0.50 >More info 0.06 >More info WT Shoot+Pi shoots Original data GEO bulk
161 Imbibed 24 h ABA 30uM (seed) 0.55 >More info -0.12 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
162 Laer pretreat GA Flg22 1h -0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
163 MYB46-GR DEX 0.11 >More info -0.51 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
164 Heat shock optimum -0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
165 phr1 Root-Pi -0.56 >More info 0.18 >More info WT Root+Pi roots Original data GEO bulk
166 siliques AtHb1 control -0.15 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
167 root protoplasts 40 mM NaCl 0.52 >More info -0.20 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
168 Leafminer damaged seedlings -0.25 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
169 Col BTH -0.40 >More info 0.67 >More info Col rosettes Original data GEO bulk
170 whole roots 140 mM NaCl 32 hour -0.53 >More info 0.28 >More info whole roots standard Original data GEO bulk
171 root control pSCR -0.53 >More info 0.29 >More info root control total control root Original data GEO bulk
172 fil-8 yab3-2 -0.53 >More info 0.38 >More info wt Apices Original data GEO bulk
173 Col0-PsmES4326-24hpi -0.50 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk